U-box domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 863 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1037 |
| AccI | GTMKAC | 2 cut(s) | 315, 421 |
| AciI | CCGC | 2 cut(s) | 26, 523 |
| AcoI | YGGCCR | 1 cut(s) | 959 |
| AcsI | RAATTY | 1 cut(s) | 354 |
| AcuI | CTGAAG | 2 cut(s) | 126, 201 |
| AdeI | CACNNNGTG | 1 cut(s) | 842 |
| AfaI | GTAC | 3 cut(s) | 227, 488, 630 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 467, 881, 1037 |
| AgsI | TTSAA | 6 cut(s) | 203, 254, 394, 902, 979, 1096 |
| AleI | CACNNNNGTG | 1 cut(s) | 341 |
| Alw21I | GWGCWC | 1 cut(s) | 1078 |
| Alw26I | GTCTC | 2 cut(s) | 908, 1129 |
| AoxI | GGCC | 3 cut(s) | 308, 959, 1028 |
| ApeKI | GCWGC | 6 cut(s) | 89, 101, 110, 371, 572, 1051 |
| ApoI | RAATTY | 1 cut(s) | 354 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 577, 609 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 269 |
| AspS9I | GGNCC | 1 cut(s) | 308 |
| AsuC2I | CCSGG | 1 cut(s) | 648 |
| AsuHPI | GGTGA | 3 cut(s) | 305, 335, 1122 |
| BalI | TGGCCA | 1 cut(s) | 961 |
| Bbv12I | GWGCWC | 1 cut(s) | 1078 |
| BbvCI | CCTCAGC | 1 cut(s) | 39 |
| BbvI | GCAGC | 6 cut(s) | 101, 113, 122, 383, 559, 1038 |
| BccI | CCATC | 1 cut(s) | 727 |
| BceAI | ACGGC | 1 cut(s) | 719 |
| BcnI | CCSGG | 1 cut(s) | 648 |
| BcoDI | GTCTC | 2 cut(s) | 908, 1129 |
| BfaI | CTAG | 4 cut(s) | 20, 329, 662, 705 |
| BfmI | CTRYAG | 2 cut(s) | 573, 723 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 98 |
| BglII | AGATCT | 1 cut(s) | 1033 |
| BisI | GCNGC | 7 cut(s) | 27, 90, 102, 111, 372, 573, 1052 |
| BlsI | GCNGC | 7 cut(s) | 28, 91, 103, 112, 373, 574, 1053 |
| Bme1390I | CCNGG | 1 cut(s) | 648 |
| BmgT120I | GGNCC | 1 cut(s) | 308 |
| BmiI | GGNNCC | 1 cut(s) | 563 |
| BmrFI | CCNGG | 1 cut(s) | 648 |
| BmrI | ACTGGG | 1 cut(s) | 533 |
| BmsI | GCATC | 2 cut(s) | 358, 924 |
| BmuI | ACTGGG | 1 cut(s) | 533 |
| BpmI | CTGGAG | 1 cut(s) | 1140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 39 |
| BpuEI | CTTGAG | 1 cut(s) | 360 |
| BpuMI | CCSGG | 1 cut(s) | 648 |
| BsaJI | CCNNGG | 2 cut(s) | 448, 548 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 467, 881, 1037 |
| Bse1I | ACTGG | 5 cut(s) | 311, 539, 808, 962, 1123 |
| BseDI | CCNNGG | 2 cut(s) | 448, 548 |
| BseGI | GGATG | 1 cut(s) | 427 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 467, 881, 1037 |
| BseMII | CTCAG | 3 cut(s) | 30, 755, 921 |
| BseNI | ACTGG | 5 cut(s) | 311, 539, 808, 962, 1123 |
| BseXI | GCAGC | 6 cut(s) | 101, 113, 122, 383, 559, 1038 |
| BshFI | GGCC | 3 cut(s) | 310, 961, 1030 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1078 |
| BsiSI | CCGG | 1 cut(s) | 648 |
| BslFI | GGGAC | 4 cut(s) | 598, 698, 829, 934 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 467, 881, 1037 |
| BsmAI | GTCTC | 2 cut(s) | 908, 1129 |
| BsmBI | CGTCTC | 1 cut(s) | 908 |
| BsmFI | GGGAC | 4 cut(s) | 598, 698, 829, 934 |
| BsnI | GGCC | 3 cut(s) | 310, 961, 1030 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1078 |
| Bsp1407I | TGTACA | 1 cut(s) | 628 |
| Bsp143I | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| BspACI | CCGC | 2 cut(s) | 26, 523 |
| BspANI | GGCC | 3 cut(s) | 310, 961, 1030 |
| BspCNI | CTCAG | 3 cut(s) | 31, 754, 922 |
| BspLI | GGNNCC | 1 cut(s) | 563 |
| BspMAI | CTGCAG | 1 cut(s) | 577 |
| BsrGI | TGTACA | 1 cut(s) | 628 |
| BsrI | ACTGG | 5 cut(s) | 311, 539, 808, 962, 1123 |
| BssECI | CCNNGG | 2 cut(s) | 448, 548 |
| BssMI | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| BssNAI | GTATAC | 2 cut(s) | 316, 422 |
| BssT1I | CCWWGG | 2 cut(s) | 448, 548 |
| Bst1107I | GTATAC | 2 cut(s) | 316, 422 |
| Bst4CI | ACNGT | 4 cut(s) | 343, 384, 470, 1002 |
| Bst6I | CTCTTC | 2 cut(s) | 177, 524 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 35 |
| BstAUI | TGTACA | 1 cut(s) | 628 |
| BstC8I | GCNNGC | 2 cut(s) | 457, 809 |
| BstDEI | CTNAG | 4 cut(s) | 39, 221, 741, 930 |
| BstF5I | GGATG | 1 cut(s) | 427 |
| BstKTI | GATC | 5 cut(s) | 220, 283, 514, 687, 1036 |
| BstMAI | GTCTC | 2 cut(s) | 908, 1129 |
| BstMBI | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 35, 98, 107, 110, 203, 394 |
| BstNSI | RCATGY | 1 cut(s) | 38 |
| BstSCI | CCNGG | 1 cut(s) | 646 |
| BstSFI | CTRYAG | 2 cut(s) | 573, 723 |
| BstV1I | GCAGC | 6 cut(s) | 101, 113, 122, 383, 559, 1038 |
| BstX2I | RGATCY | 1 cut(s) | 1033 |
| BstYI | RGATCY | 1 cut(s) | 1033 |
| BstZ17I | GTATAC | 2 cut(s) | 316, 422 |
| BsuRI | GGCC | 3 cut(s) | 310, 961, 1030 |
| BtsCI | GGATG | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 3 cut(s) | 348, 694, 1007 |
| Cac8I | GCNNGC | 2 cut(s) | 457, 809 |
| Cfr13I | GGNCC | 1 cut(s) | 308 |
| Csp6I | GTAC | 3 cut(s) | 226, 487, 629 |
| CviAII | CATG | 6 cut(s) | 35, 436, 490, 751, 847, 1105 |
| CviQI | GTAC | 3 cut(s) | 226, 487, 629 |
| DdeI | CTNAG | 4 cut(s) | 39, 221, 741, 930 |
| DpnI | GATC | 5 cut(s) | 219, 282, 513, 686, 1035 |
| DpnII | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| DraI | TTTAAA | 1 cut(s) | 172 |
| DraIII | CACNNNGTG | 1 cut(s) | 842 |
| EaeI | YGGCCR | 1 cut(s) | 959 |
| Eam1104I | CTCTTC | 2 cut(s) | 177, 524 |
| EarI | CTCTTC | 2 cut(s) | 177, 524 |
| Eco130I | CCWWGG | 2 cut(s) | 448, 548 |
| Eco32I | GATATC | 1 cut(s) | 829 |
| Eco57I | CTGAAG | 2 cut(s) | 126, 201 |
| EcoRV | GATATC | 1 cut(s) | 829 |
| EcoT14I | CCWWGG | 2 cut(s) | 448, 548 |
| ErhI | CCWWGG | 2 cut(s) | 448, 548 |
| Esp3I | CGTCTC | 1 cut(s) | 908 |
| FaeI | CATG | 6 cut(s) | 38, 439, 493, 754, 850, 1108 |
| FaqI | GGGAC | 4 cut(s) | 598, 698, 829, 934 |
| FatI | CATG | 6 cut(s) | 34, 435, 489, 750, 846, 1104 |
| FauNDI | CATATG | 1 cut(s) | 214 |
| FblI | GTMKAC | 2 cut(s) | 315, 421 |
| Fnu4HI | GCNGC | 7 cut(s) | 27, 90, 102, 111, 372, 573, 1052 |
| FokI | GGATG | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 7 cut(s) | 27, 90, 102, 111, 372, 573, 1052 |
| FspBI | CTAG | 4 cut(s) | 20, 329, 662, 705 |
| GluI | GCNGC | 7 cut(s) | 27, 90, 102, 111, 372, 573, 1052 |
| GsuI | CTGGAG | 1 cut(s) | 1140 |
| HaeIII | GGCC | 3 cut(s) | 310, 961, 1030 |
| HapII | CCGG | 1 cut(s) | 648 |
| Hin1II | CATG | 6 cut(s) | 38, 439, 493, 754, 850, 1108 |
| HincII | GTYRAC | 1 cut(s) | 888 |
| HindII | GTYRAC | 1 cut(s) | 888 |
| HindIII | AAGCTT | 1 cut(s) | 165 |
| HinfI | GANTC | 3 cut(s) | 176, 516, 889 |
| HpaII | CCGG | 1 cut(s) | 648 |
| HphI | GGTGA | 3 cut(s) | 305, 335, 1122 |
| Hpy166II | GTNNAC | 5 cut(s) | 316, 326, 422, 888, 998 |
| Hpy188I | TCNGA | 4 cut(s) | 181, 566, 609, 826 |
| Hpy188III | TCNNGA | 4 cut(s) | 245, 365, 635, 953 |
| Hpy8I | GTNNAC | 5 cut(s) | 316, 326, 422, 888, 998 |
| HpyAV | CCTTC | 4 cut(s) | 61, 141, 290, 611 |
| HpyCH4III | ACNGT | 4 cut(s) | 343, 384, 470, 1002 |
| HpyCH4IV | ACGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 5 cut(s) | 50, 155, 371, 575, 1170 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 35, 98, 107, 110, 203, 394 |
| HpyF3I | CTNAG | 4 cut(s) | 39, 221, 741, 930 |
| HpySE526I | ACGT | 1 cut(s) | 361 |
| Hsp92II | CATG | 6 cut(s) | 38, 439, 493, 754, 850, 1108 |
| Kzo9I | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| LmnI | GCTCC | 2 cut(s) | 452, 501 |
| Lsp1109I | GCAGC | 6 cut(s) | 101, 113, 122, 383, 559, 1038 |
| LweI | GCATC | 2 cut(s) | 358, 924 |
| MaeI | CTAG | 4 cut(s) | 20, 329, 662, 705 |
| MaeII | ACGT | 1 cut(s) | 361 |
| MaeIII | GTNAC | 3 cut(s) | 530, 635, 736 |
| MalI | GATC | 5 cut(s) | 219, 282, 513, 686, 1035 |
| MboI | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| MboII | GAAGA | 5 cut(s) | 17, 194, 199, 511, 521 |
| MflI | RGATCY | 1 cut(s) | 1033 |
| MhlI | GDGCHC | 1 cut(s) | 1078 |
| MlsI | TGGCCA | 1 cut(s) | 961 |
| MluCI | AATT | 6 cut(s) | 128, 240, 354, 567, 579, 1096 |
| MluNI | TGGCCA | 1 cut(s) | 961 |
| MlyI | GAGTC | 2 cut(s) | 510, 883 |
| Mox20I | TGGCCA | 1 cut(s) | 961 |
| MroXI | GAANNNNTTC | 1 cut(s) | 269 |
| MscI | TGGCCA | 1 cut(s) | 961 |
| MseI | TTAA | 3 cut(s) | 171, 413, 1062 |
| MslI | CAYNNNNRTG | 2 cut(s) | 341, 672 |
| Msp20I | TGGCCA | 1 cut(s) | 961 |
| MspA1I | CMGCKG | 2 cut(s) | 104, 764 |
| MspI | CCGG | 1 cut(s) | 648 |
| MspR9I | CCNGG | 1 cut(s) | 648 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 35, 98, 107, 110, 203, 394 |
| NciI | CCSGG | 1 cut(s) | 648 |
| NdeI | CATATG | 1 cut(s) | 214 |
| NdeII | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| NlaIII | CATG | 6 cut(s) | 38, 439, 493, 754, 850, 1108 |
| NlaIV | GGNNCC | 1 cut(s) | 563 |
| NmuCI | GTSAC | 2 cut(s) | 635, 736 |
| NspI | RCATGY | 1 cut(s) | 38 |
| OliI | CACNNNNGTG | 1 cut(s) | 341 |
| PdmI | GAANNNNTTC | 1 cut(s) | 269 |
| PfeI | GAWTC | 1 cut(s) | 176 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1037 |
| PkrI | GCNGC | 7 cut(s) | 28, 91, 103, 112, 373, 574, 1053 |
| PleI | GAGTC | 2 cut(s) | 510, 883 |
| PpsI | GAGTC | 2 cut(s) | 510, 883 |
| PsiI | TTATAA | 1 cut(s) | 863 |
| PspN4I | GGNNCC | 1 cut(s) | 563 |
| PspPI | GGNCC | 1 cut(s) | 308 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 612, 644 |
| PstI | CTGCAG | 1 cut(s) | 577 |
| PsuI | RGATCY | 1 cut(s) | 1033 |
| PvuII | CAGCTG | 2 cut(s) | 104, 764 |
| RsaI | GTAC | 3 cut(s) | 227, 488, 630 |
| RsaNI | GTAC | 3 cut(s) | 226, 487, 629 |
| RseI | CAYNNNNRTG | 2 cut(s) | 341, 672 |
| SaqAI | TTAA | 3 cut(s) | 171, 413, 1062 |
| SatI | GCNGC | 7 cut(s) | 27, 90, 102, 111, 372, 573, 1052 |
| Sau3AI | GATC | 5 cut(s) | 217, 280, 511, 684, 1033 |
| Sau96I | GGNCC | 1 cut(s) | 308 |
| SchI | GAGTC | 2 cut(s) | 510, 883 |
| ScrFI | CCNGG | 1 cut(s) | 648 |
| SduI | GDGCHC | 1 cut(s) | 1078 |
| SfaNI | GCATC | 2 cut(s) | 358, 924 |
| SfcI | CTRYAG | 2 cut(s) | 573, 723 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 341, 672 |
| SmlI | CTYRAG | 1 cut(s) | 375 |
| SmoI | CTYRAG | 1 cut(s) | 375 |
| Sse9I | AATT | 6 cut(s) | 128, 240, 354, 567, 579, 1096 |
| SsiI | CCGC | 2 cut(s) | 26, 523 |
| SspMI | CTAG | 4 cut(s) | 20, 329, 662, 705 |
| StyD4I | CCNGG | 1 cut(s) | 646 |
| StyI | CCWWGG | 2 cut(s) | 448, 548 |
| TaaI | ACNGT | 4 cut(s) | 343, 384, 470, 1002 |
| TaiI | ACGT | 1 cut(s) | 364 |
| TaqI | TCGA | 4 cut(s) | 283, 514, 783, 1145 |
| TasI | AATT | 6 cut(s) | 128, 240, 354, 567, 579, 1096 |
| TatI | WGTACW | 2 cut(s) | 486, 628 |
| TauI | GCSGC | 1 cut(s) | 29 |
| TfiI | GAWTC | 1 cut(s) | 176 |
| Tru1I | TTAA | 3 cut(s) | 171, 413, 1062 |
| Tru9I | TTAA | 3 cut(s) | 171, 413, 1062 |
| TscAI | CASTG | 3 cut(s) | 348, 694, 1007 |
| TseFI | GTSAC | 2 cut(s) | 635, 736 |
| TseI | GCWGC | 6 cut(s) | 89, 101, 110, 371, 572, 1051 |
| Tsp45I | GTSAC | 2 cut(s) | 635, 736 |
| TspDTI | ATGAA | 3 cut(s) | 24, 176, 593 |
| TspRI | CASTG | 3 cut(s) | 348, 694, 1007 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1037 |
| XapI | RAATTY | 1 cut(s) | 354 |
| XceI | RCATGY | 1 cut(s) | 38 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 546, 877 |
| XmiI | GTMKAC | 2 cut(s) | 315, 421 |
| XmnI | GAANNNNTTC | 1 cut(s) | 269 |
| XspI | CTAG | 4 cut(s) | 20, 329, 662, 705 |