U-box domain-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Usp | PF00582 | 16 - 148 | 3.5e-12 | Universal stress protein family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 296 |
| Acc36I | ACCTGC | 1 cut(s) | 149 |
| Acc65I | GGTACC | 1 cut(s) | 511 |
| AccB1I | GGYRCC | 2 cut(s) | 439, 511 |
| AciI | CCGC | 1 cut(s) | 527 |
| AfaI | GTAC | 3 cut(s) | 206, 461, 513 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 383 |
| AgsI | TTSAA | 1 cut(s) | 302 |
| AluBI | AGCT | 3 cut(s) | 524, 536, 566 |
| AluI | AGCT | 3 cut(s) | 524, 536, 566 |
| Alw21I | GWGCWC | 3 cut(s) | 325, 526, 552 |
| AoxI | GGCC | 1 cut(s) | 121 |
| AseI | ATTAAT | 1 cut(s) | 345 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 240 |
| Asp718I | GGTACC | 1 cut(s) | 511 |
| AsuHPI | GGTGA | 1 cut(s) | 380 |
| BaeGI | GKGCMC | 1 cut(s) | 442 |
| BanI | GGYRCC | 2 cut(s) | 439, 511 |
| BanII | GRGCYC | 1 cut(s) | 526 |
| BbsI | GAAGAC | 1 cut(s) | 309 |
| Bbv12I | GWGCWC | 3 cut(s) | 325, 526, 552 |
| BccI | CCATC | 2 cut(s) | 223, 385 |
| BfaI | CTAG | 2 cut(s) | 318, 612 |
| BfmI | CTRYAG | 2 cut(s) | 156, 634 |
| BfuAI | ACCTGC | 1 cut(s) | 149 |
| BlpI | GCTNAGC | 1 cut(s) | 537 |
| BmiI | GGNNCC | 3 cut(s) | 163, 441, 513 |
| BpiI | GAAGAC | 1 cut(s) | 309 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 537 |
| BsaJI | CCNNGG | 1 cut(s) | 231 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 383 |
| Bse3DI | GCAATG | 1 cut(s) | 134 |
| BseDI | CCNNGG | 1 cut(s) | 231 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BseMI | GCAATG | 1 cut(s) | 134 |
| BseRI | GAGGAG | 1 cut(s) | 203 |
| BseSI | GKGCMC | 1 cut(s) | 442 |
| BshFI | GGCC | 1 cut(s) | 123 |
| BshNI | GGYRCC | 2 cut(s) | 439, 511 |
| BsiHKAI | GWGCWC | 3 cut(s) | 325, 526, 552 |
| BslFI | GGGAC | 1 cut(s) | 385 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BsmFI | GGGAC | 1 cut(s) | 385 |
| BsmI | GAATGC | 1 cut(s) | 643 |
| BsnI | GGCC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 4 cut(s) | 325, 442, 526, 552 |
| Bsp143I | GATC | 1 cut(s) | 594 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 537 |
| BspACI | CCGC | 1 cut(s) | 527 |
| BspANI | GGCC | 1 cut(s) | 123 |
| BspHI | TCATGA | 1 cut(s) | 402 |
| BspLI | GGNNCC | 3 cut(s) | 163, 441, 513 |
| BspMAI | CTGCAG | 1 cut(s) | 160 |
| BspMI | ACCTGC | 1 cut(s) | 149 |
| BspT107I | GGYRCC | 2 cut(s) | 439, 511 |
| BsrDI | GCAATG | 1 cut(s) | 134 |
| BssECI | CCNNGG | 1 cut(s) | 231 |
| BssMI | GATC | 1 cut(s) | 594 |
| BssT1I | CCWWGG | 1 cut(s) | 231 |
| Bst4CI | ACNGT | 3 cut(s) | 100, 427, 457 |
| Bst6I | CTCTTC | 1 cut(s) | 33 |
| BstC8I | GCNNGC | 1 cut(s) | 641 |
| BstDEI | CTNAG | 1 cut(s) | 537 |
| BstEII | GGTNACC | 1 cut(s) | 386 |
| BstKTI | GATC | 1 cut(s) | 597 |
| BstMBI | GATC | 1 cut(s) | 594 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 547 |
| BstNSI | RCATGY | 1 cut(s) | 643 |
| BstPI | GGTNACC | 1 cut(s) | 386 |
| BstSFI | CTRYAG | 2 cut(s) | 156, 634 |
| BstSLI | GKGCMC | 1 cut(s) | 442 |
| BstV2I | GAAGAC | 1 cut(s) | 309 |
| BsuRI | GGCC | 1 cut(s) | 123 |
| BtsI | GCAGTG | 1 cut(s) | 57 |
| BtsIMutI | CAGTG | 4 cut(s) | 51, 57, 306, 462 |
| BveI | ACCTGC | 1 cut(s) | 149 |
| Cac8I | GCNNGC | 1 cut(s) | 641 |
| CciI | TCATGA | 1 cut(s) | 402 |
| Csp6I | GTAC | 3 cut(s) | 205, 460, 512 |
| CviAII | CATG | 3 cut(s) | 143, 403, 640 |
| CviJI | RGCY | 8 cut(s) | 78, 123, 194, 230, 275, 524, 536, 566 |
| CviKI_1 | RGCY | 8 cut(s) | 78, 123, 194, 230, 275, 524, 536, 566 |
| CviQI | GTAC | 3 cut(s) | 205, 460, 512 |
| DdeI | CTNAG | 1 cut(s) | 537 |
| DpnI | GATC | 1 cut(s) | 596 |
| DpnII | GATC | 1 cut(s) | 594 |
| Eam1104I | CTCTTC | 1 cut(s) | 33 |
| EarI | CTCTTC | 1 cut(s) | 33 |
| EciI | GGCGGA | 1 cut(s) | 516 |
| Ecl136II | GAGCTC | 1 cut(s) | 524 |
| Eco130I | CCWWGG | 1 cut(s) | 231 |
| Eco24I | GRGCYC | 1 cut(s) | 526 |
| Eco53kI | GAGCTC | 1 cut(s) | 524 |
| Eco91I | GGTNACC | 1 cut(s) | 386 |
| EcoICRI | GAGCTC | 1 cut(s) | 524 |
| EcoO65I | GGTNACC | 1 cut(s) | 386 |
| EcoT14I | CCWWGG | 1 cut(s) | 231 |
| EcoT22I | ATGCAT | 1 cut(s) | 645 |
| EcoT38I | GRGCYC | 1 cut(s) | 526 |
| ErhI | CCWWGG | 1 cut(s) | 231 |
| FaeI | CATG | 3 cut(s) | 146, 406, 643 |
| FaiI | YATR | 8 cut(s) | 84, 144, 176, 278, 296, 336, 404, 641 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 375, 407 |
| FaqI | GGGAC | 1 cut(s) | 385 |
| FatI | CATG | 3 cut(s) | 142, 402, 639 |
| FriOI | GRGCYC | 1 cut(s) | 526 |
| FspBI | CTAG | 2 cut(s) | 318, 612 |
| HaeIII | GGCC | 1 cut(s) | 123 |
| Hin1II | CATG | 3 cut(s) | 146, 406, 643 |
| HinfI | GANTC | 1 cut(s) | 41 |
| HphI | GGTGA | 1 cut(s) | 380 |
| Hpy166II | GTNNAC | 3 cut(s) | 205, 331, 460 |
| Hpy188I | TCNGA | 2 cut(s) | 220, 571 |
| Hpy188III | TCNNGA | 4 cut(s) | 117, 318, 403, 592 |
| Hpy8I | GTNNAC | 3 cut(s) | 205, 331, 460 |
| HpyAV | CCTTC | 1 cut(s) | 178 |
| HpyCH4III | ACNGT | 3 cut(s) | 100, 427, 457 |
| HpyCH4IV | ACGT | 2 cut(s) | 414, 462 |
| HpyCH4V | TGCA | 7 cut(s) | 86, 158, 178, 264, 285, 453, 643 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 547 |
| HpyF3I | CTNAG | 1 cut(s) | 537 |
| HpySE526I | ACGT | 2 cut(s) | 414, 462 |
| Hsp92II | CATG | 3 cut(s) | 146, 406, 643 |
| KpnI | GGTACC | 1 cut(s) | 515 |
| Kzo9I | GATC | 1 cut(s) | 594 |
| LmnI | GCTCC | 2 cut(s) | 144, 529 |
| LpnPI | CCDG | 5 cut(s) | 6, 130, 144, 180, 546 |
| MaeI | CTAG | 2 cut(s) | 318, 612 |
| MaeII | ACGT | 2 cut(s) | 414, 462 |
| MaeIII | GTNAC | 1 cut(s) | 386 |
| MalI | GATC | 1 cut(s) | 596 |
| MboI | GATC | 1 cut(s) | 594 |
| MboII | GAAGA | 5 cut(s) | 50, 101, 236, 314, 584 |
| MhlI | GDGCHC | 4 cut(s) | 325, 442, 526, 552 |
| MluCI | AATT | 3 cut(s) | 291, 297, 346 |
| MlyI | GAGTC | 1 cut(s) | 50 |
| MmeI | TCCRAC | 1 cut(s) | 189 |
| MnlI | CCTC | 8 cut(s) | 5, 17, 113, 181, 184, 349, 390, 608 |
| Mph1103I | ATGCAT | 1 cut(s) | 645 |
| MroXI | GAANNNNTTC | 1 cut(s) | 240 |
| MseI | TTAA | 2 cut(s) | 345, 649 |
| Mva1269I | GAATGC | 1 cut(s) | 643 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 547 |
| NdeII | GATC | 1 cut(s) | 594 |
| NlaIII | CATG | 3 cut(s) | 146, 406, 643 |
| NlaIV | GGNNCC | 3 cut(s) | 163, 441, 513 |
| NmuCI | GTSAC | 1 cut(s) | 386 |
| NsiI | ATGCAT | 1 cut(s) | 645 |
| NspI | RCATGY | 1 cut(s) | 643 |
| PaeI | GCATGC | 1 cut(s) | 643 |
| PagI | TCATGA | 1 cut(s) | 402 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 588 |
| PctI | GAATGC | 1 cut(s) | 643 |
| PdmI | GAANNNNTTC | 1 cut(s) | 240 |
| PleI | GAGTC | 1 cut(s) | 49 |
| PpsI | GAGTC | 1 cut(s) | 49 |
| PshBI | ATTAAT | 1 cut(s) | 345 |
| PsiI | TTATAA | 1 cut(s) | 296 |
| Psp124BI | GAGCTC | 1 cut(s) | 526 |
| PspEI | GGTNACC | 1 cut(s) | 386 |
| PspN4I | GGNNCC | 3 cut(s) | 163, 441, 513 |
| PstI | CTGCAG | 1 cut(s) | 160 |
| RsaI | GTAC | 3 cut(s) | 206, 461, 513 |
| RsaNI | GTAC | 3 cut(s) | 205, 460, 512 |
| SacI | GAGCTC | 1 cut(s) | 526 |
| SaqAI | TTAA | 2 cut(s) | 345, 649 |
| Sau3AI | GATC | 1 cut(s) | 594 |
| SchI | GAGTC | 1 cut(s) | 50 |
| SduI | GDGCHC | 4 cut(s) | 325, 442, 526, 552 |
| SfcI | CTRYAG | 2 cut(s) | 156, 634 |
| SphI | GCATGC | 1 cut(s) | 643 |
| Sse9I | AATT | 3 cut(s) | 291, 297, 346 |
| SsiI | CCGC | 1 cut(s) | 527 |
| SspMI | CTAG | 2 cut(s) | 318, 612 |
| SstI | GAGCTC | 1 cut(s) | 526 |
| StyI | CCWWGG | 1 cut(s) | 231 |
| TaaI | ACNGT | 3 cut(s) | 100, 427, 457 |
| TaiI | ACGT | 2 cut(s) | 417, 465 |
| TaqI | TCGA | 1 cut(s) | 182 |
| TasI | AATT | 3 cut(s) | 291, 297, 346 |
| Tru1I | TTAA | 2 cut(s) | 345, 649 |
| Tru9I | TTAA | 2 cut(s) | 345, 649 |
| TscAI | CASTG | 4 cut(s) | 51, 57, 313, 462 |
| TseFI | GTSAC | 1 cut(s) | 386 |
| Tsp45I | GTSAC | 1 cut(s) | 386 |
| TspDTI | ATGAA | 3 cut(s) | 240, 391, 474 |
| TspRI | CASTG | 4 cut(s) | 51, 57, 313, 462 |
| VspI | ATTAAT | 1 cut(s) | 345 |
| XbaI | TCTAGA | 1 cut(s) | 317 |
| XceI | RCATGY | 1 cut(s) | 643 |
| XmnI | GAANNNNTTC | 1 cut(s) | 240 |
| XspI | CTAG | 2 cut(s) | 318, 612 |
| Zsp2I | ATGCAT | 1 cut(s) | 645 |