Rmu_sc0021270.1_g000001

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021270.1
OG0000353
Physical Location & Seq
Reverse (-)
2200 .. 5595
3396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021270.1_g000001.1.cds

Sequence Viewer

Length: 1941 bp
atgcaaattcaattgagattttggtacttggtgttccaacaagaggtggcattttcaggaaaaatctcatctatgcgatgctccaccgtagcaccgccacggcctcctccacgtagtaatcatcaaatgcaacaccatcccagcaatgtttctgaagcaagtgattcgcatttcatccgcacccagaagcctaacagcagagcatcagagaggttgcattatcaatcgggtagccagcagtttgatgaaatcaagtcaccattcactagaggaagaccttcgatggacagatcatttgagctcccaccagatagtgacatatcgtttgtgagtagtggaagaccaagtgtggatcgcatgtatccttctttctatgatagtatggattcagggaggaactctcgacgtttgattggctcagaaacggaaaacagaagctctgtgtcatccaacccgagaagcaagcattttatggaaatcaactctccacaacttaaattttcaccatcgatatcctcagttgatagtggaaactcttggttatcacaaaataataataataatttggaagatgtggagcttgagatgaggaggctcaggctagagctcaagcaaacaatggagatgtacaatacatcgtgcaaagaagcactgacagcaaaacataaggaaaatgaatttaacaggtgcaaaatggaagaaggacaaagattagaacaggcgcgactagctgaggaagctgcattggcacttgtagagagggagaaagcaaaatgcacggcagcgattgaagcagctgcagcagctcaaaggcttgccgaactggaagcacaaaagaggaggaacgcagaaatgaaagcccttaaagaatccgaagagaggaagaagacagttgaagcaaagtcatatgatgttaggtacaggaagtacacaattgaggagattgaagtggcaacagataaattttcactagctcgcaaggttggggaaggaggctatgggccagtatacagaggtgaactgcatcatacaccagttgctataaaagttctacgtccggatgcagctcaagggcgatcgcagttccagctagaggttgaagtattgagctgcatacgacatccaaacacggttctccttcttggagcttgtccagagtacggttgtttagtctatgagtacatggctaatgggagcttggaaaatcgtctatttcaccgaggtaacaccccggctattccttggcaactaaggtttcgaattgctgcagaaattgcaacggggctcttattccttcatcaggctaagccggaaccccttgtgcaccgtgacttaaaacctggcaacatattgctagataataactatgtgagcaagattagtgatgtaggtttggctagacttgtgcctccatcaatagctgatgctgtcacacagtatcatatgacatcaacagctggaacattttgctacattgatccagagtatcagcaaacaggcatgctcggaacaaaatctgatatctactcactaggtgtgatgcttctacaaatcattacagccaaaccaccaatgggtttgactcatcatgtagagcgggctattgagacgggaagcttttgtgagatgcttgatcctgcagttcctgattggccagttgaggaagccttggagtttgccaaactttctttgcagtgtgctgaaatgagaaaaaaagaccgacccgatcttgggaaggttatactgcctgagcttaacagattgagagccctcgccgacgatagcttccaatgtgttatgtttggcggaagtggagtactctcaccaaatcaagactcaaattctacatcacaagatgtcataagtcgaccacaatctggatatgatagcttgaggagtcgtacttcgagcacatcatctcattctgaaagaagtagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Usp

Protein Analysis

646

Amino Acids

72.76

Weight (kDa)

7.61

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1877
AccBSI CCGCTC 1 cut(s) 1597
AccI GTMKAC 2 cut(s) 1008, 1867
AccII CGCG 1 cut(s) 724
AccIII TCCGGA 1 cut(s) 1057
AciI CCGC 4 cut(s) 95, 178, 1597, 1806
AclWI GGATC 3 cut(s) 360, 1472, 1628
AcoI YGGCCR 1 cut(s) 1652
AcsI RAATTY 5 cut(s) 6, 497, 677, 962, 1840
AcuI CTGAAG 1 cut(s) 174
AdeI CACNNNGTG 1 cut(s) 1535
AfaI GTAC 8 cut(s) 26, 629, 920, 929, 1160, 1181, 1818, 1903
AfiI CCNNNNNNNGG 9 cut(s) 43, 879, 1093, 1160, 1300, 1574, 1730, 1731, 1877
AgsI TTSAA 5 cut(s) 11, 791, 896, 947, 1100
AjnI CCWGG 1 cut(s) 1339
Alw21I GWGCWC 4 cut(s) 303, 609, 1326, 1913
Alw26I GTCTC 1 cut(s) 1601
Alw44I GTGCAC 1 cut(s) 1322
AlwI GGATC 3 cut(s) 360, 1472, 1628
AlwNI CAGNNNCTG 1 cut(s) 1646
Ama87I CYCGRG 1 cut(s) 454
Aor13HI TCCGGA 1 cut(s) 1057
AoxI GGCC 3 cut(s) 101, 1001, 1652
ApaLI GTGCAC 1 cut(s) 1322
ApeKI GCWGC 9 cut(s) 740, 782, 794, 797, 800, 803, 1064, 1110, 1265
ApoI RAATTY 5 cut(s) 6, 497, 677, 962, 1840
ArsI GACNNNNNNTTYG 4 cut(s) 278, 308, 310, 340
AsiSI GCGATCGC 1 cut(s) 1079
Asp700I GAANNNNTTC 1 cut(s) 277
AspLEI GCGC 1 cut(s) 724
AspS9I GGNCC 1 cut(s) 1001
AsuC2I CCSGG 1 cut(s) 1232
AsuHPI GGTGA 5 cut(s) 249, 495, 1028, 1208, 1815
AsuII TTCGAA 1 cut(s) 1258
AvaI CYCGRG 1 cut(s) 454
BaeGI GKGCMC 1 cut(s) 1326
BalI TGGCCA 1 cut(s) 1654
BanII GRGCYC 4 cut(s) 303, 609, 1287, 1771
BbsI GAAGAC 3 cut(s) 280, 346, 893
Bbv12I GWGCWC 4 cut(s) 303, 609, 1326, 1913
BbvCI CCTCAGC 1 cut(s) 732
BbvI GCAGC 9 cut(s) 727, 784, 794, 806, 812, 815, 1076, 1097, 1252
BccI CCATC 4 cut(s) 144, 277, 514, 1420
BceAI ACGGC 2 cut(s) 116, 795
BcgI CGANNNNNNTGC 2 cut(s) 147, 181
BciT130I CCWGG 1 cut(s) 1341
BciVI GTATCC 1 cut(s) 372
BcnI CCSGG 1 cut(s) 1232
BcoDI GTCTC 1 cut(s) 1601
BfaI CTAG 8 cut(s) 267, 602, 728, 971, 1091, 1355, 1398, 1532
BfmI CTRYAG 3 cut(s) 798, 1266, 1638
BfuI GTATCC 1 cut(s) 372
BisI GCNGC 9 cut(s) 741, 783, 795, 798, 801, 804, 1065, 1111, 1266
BlpI GCTNAGC 1 cut(s) 1305
BlsI GCNGC 9 cut(s) 742, 784, 796, 799, 802, 805, 1066, 1112, 1267
BmcAI AGTACT 1 cut(s) 1818
Bme1390I CCNGG 2 cut(s) 1232, 1341
BmeT110I CYCGRG 1 cut(s) 454
BmgT120I GGNCC 1 cut(s) 1001
BmiI GGNNCC 1 cut(s) 1314
BmrFI CCNGG 2 cut(s) 1232, 1341
BmsI GCATC 7 cut(s) 68, 212, 1033, 1051, 1414, 1530, 1617
BpiI GAAGAC 3 cut(s) 280, 346, 893
BplI GAGNNNNNCTC 2 cut(s) 385, 417
Bpu10I CCTNAGC 3 cut(s) 596, 732, 1749
Bpu1102I GCTNAGC 1 cut(s) 1305
Bpu14I TTCGAA 1 cut(s) 1258
BpuEI CTTGAG 4 cut(s) 593, 602, 1053, 1912
BpuMI CCSGG 1 cut(s) 1232
Bsa29I ATCGAT 1 cut(s) 509
BsaAI YACGTR 1 cut(s) 113
BsaJI CCNNGG 5 cut(s) 98, 1219, 1230, 1241, 1668
BsaWI WCCGGW 1 cut(s) 1057
Bsc4I CCNNNNNNNGG 9 cut(s) 43, 879, 1093, 1160, 1300, 1574, 1730, 1731, 1877
Bse1I ACTGG 4 cut(s) 828, 1004, 1034, 1655
Bse3DI GCAATG 1 cut(s) 151
BseAI TCCGGA 1 cut(s) 1057
BseBI CCWGG 1 cut(s) 1341
BseCI ATCGAT 1 cut(s) 509
BseDI CCNNGG 5 cut(s) 98, 1219, 1230, 1241, 1668
BseGI GGATG 5 cut(s) 136, 174, 446, 1066, 1120
BseLI CCNNNNNNNGG 9 cut(s) 43, 879, 1093, 1160, 1300, 1574, 1730, 1731, 1877
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 5 cut(s) 432, 531, 610, 723, 1740
BseNI ACTGG 4 cut(s) 828, 1004, 1034, 1655
BseRI GAGGAG 5 cut(s) 96, 604, 853, 953, 1909
BseSI GKGCMC 1 cut(s) 1326
BseXI GCAGC 9 cut(s) 727, 784, 794, 806, 812, 815, 1076, 1097, 1252
BseYI CCCAGC 1 cut(s) 140
Bsh1236I CGCG 1 cut(s) 724
Bsh1285I CGRYCG 1 cut(s) 1079
BshFI GGCC 3 cut(s) 103, 1003, 1654
BshVI ATCGAT 1 cut(s) 509
BsiEI CGRYCG 1 cut(s) 1079
BsiHKAI GWGCWC 4 cut(s) 303, 609, 1326, 1913
BsiHKCI CYCGRG 1 cut(s) 454
BsiSI CCGG 3 cut(s) 1058, 1232, 1310
BslI CCNNNNNNNGG 9 cut(s) 43, 879, 1093, 1160, 1300, 1574, 1730, 1731, 1877
BsmAI GTCTC 1 cut(s) 1601
BsmBI CGTCTC 1 cut(s) 1601
BsnI GGCC 3 cut(s) 103, 1003, 1654
BsoBI CYCGRG 1 cut(s) 454
Bsp119I TTCGAA 1 cut(s) 1258
Bsp1286I GDGCHC 6 cut(s) 303, 609, 1287, 1326, 1771, 1913
Bsp13I TCCGGA 1 cut(s) 1057
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
Bsp1720I GCTNAGC 1 cut(s) 1305
BspACI CCGC 4 cut(s) 95, 178, 1597, 1806
BspANI GGCC 3 cut(s) 103, 1003, 1654
BspCNI CTCAG 5 cut(s) 431, 530, 609, 724, 1741
BspDI ATCGAT 1 cut(s) 509
BspEI TCCGGA 1 cut(s) 1057
BspFNI CGCG 1 cut(s) 724
BspLI GGNNCC 1 cut(s) 1314
BspMAI CTGCAG 3 cut(s) 802, 1270, 1642
BspPI GGATC 3 cut(s) 360, 1472, 1628
BspT104I TTCGAA 1 cut(s) 1258
BsrBI CCGCTC 1 cut(s) 1597
BsrDI GCAATG 1 cut(s) 151
BsrGI TGTACA 1 cut(s) 627
BsrI ACTGG 4 cut(s) 828, 1004, 1034, 1655
BssECI CCNNGG 5 cut(s) 98, 1219, 1230, 1241, 1668
BssMI GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
BssNAI GTATAC 1 cut(s) 1009
BssT1I CCWWGG 2 cut(s) 1241, 1668
Bst1107I GTATAC 1 cut(s) 1009
Bst2UI CCWGG 1 cut(s) 1341
Bst4CI ACNGT 6 cut(s) 88, 892, 1132, 1163, 1328, 1437
Bst6I CTCTTC 1 cut(s) 870
BstAPI GCANNNNNTGC 1 cut(s) 1274
BstAUI TGTACA 1 cut(s) 627
BstBAI YACGTR 1 cut(s) 113
BstBI TTCGAA 1 cut(s) 1258
BstC8I GCNNGC 6 cut(s) 236, 464, 816, 976, 1502, 1599
BstDEI CTNAG 7 cut(s) 418, 517, 596, 732, 1250, 1305, 1749
BstDSI CCRYGG 1 cut(s) 98
BstENI CCTNNNNNAGG 1 cut(s) 1298
BstF5I GGATG 5 cut(s) 136, 174, 446, 1066, 1120
BstFNI CGCG 1 cut(s) 724
BstHHI GCGC 1 cut(s) 724
BstKTI GATC 6 cut(s) 293, 355, 1079, 1480, 1636, 1729
BstMAI GTCTC 1 cut(s) 1601
BstMBI GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
BstMCI CGRYCG 1 cut(s) 1079
BstMWI GCNNNNNNNGC 9 cut(s) 656, 728, 737, 746, 791, 800, 803, 1087, 1274
BstNI CCWGG 1 cut(s) 1341
BstNSI RCATGY 2 cut(s) 361, 1504
BstSCI CCNGG 2 cut(s) 1230, 1339
BstSFI CTRYAG 3 cut(s) 798, 1266, 1638
BstSLI GKGCMC 1 cut(s) 1326
BstUI CGCG 1 cut(s) 724
BstV1I GCAGC 9 cut(s) 727, 784, 794, 806, 812, 815, 1076, 1097, 1252
BstV2I GAAGAC 3 cut(s) 280, 346, 893
BstZ17I GTATAC 1 cut(s) 1009
Bsu15I ATCGAT 1 cut(s) 509
BsuI GTATCC 1 cut(s) 372
BsuRI GGCC 3 cut(s) 103, 1003, 1654
BsuTUI ATCGAT 1 cut(s) 509
BtgI CCRYGG 1 cut(s) 98
BtgZI GCGATG 1 cut(s) 91
BtsCI GGATG 5 cut(s) 136, 174, 446, 1066, 1120
BtsI GCAGTG 1 cut(s) 1700
BtsIMutI CAGTG 2 cut(s) 650, 1700
Cac8I GCNNGC 6 cut(s) 236, 464, 816, 976, 1502, 1599
CaiI CAGNNNCTG 1 cut(s) 1646
CfoI GCGC 1 cut(s) 724
Cfr13I GGNCC 1 cut(s) 1001
ClaI ATCGAT 1 cut(s) 509
Csp6I GTAC 8 cut(s) 25, 628, 919, 928, 1159, 1180, 1817, 1902
CviAII CATG 4 cut(s) 358, 1183, 1501, 1589
CviQI GTAC 8 cut(s) 25, 628, 919, 928, 1159, 1180, 1817, 1902
DdeI CTNAG 7 cut(s) 418, 517, 596, 732, 1250, 1305, 1749
DpnI GATC 6 cut(s) 292, 354, 1078, 1479, 1635, 1728
DpnII GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
DraIII CACNNNGTG 1 cut(s) 1535
EaeI YGGCCR 1 cut(s) 1652
Eam1104I CTCTTC 1 cut(s) 870
EarI CTCTTC 1 cut(s) 870
EciI GGCGGA 1 cut(s) 1821
Ecl136II GAGCTC 2 cut(s) 301, 607
Eco130I CCWWGG 2 cut(s) 1241, 1668
Eco24I GRGCYC 4 cut(s) 303, 609, 1287, 1771
Eco32I GATATC 2 cut(s) 513, 1522
Eco53kI GAGCTC 2 cut(s) 301, 607
Eco57I CTGAAG 1 cut(s) 174
Eco88I CYCGRG 1 cut(s) 454
EcoICRI GAGCTC 2 cut(s) 301, 607
EcoNI CCTNNNNNAGG 1 cut(s) 1298
EcoRII CCWGG 1 cut(s) 1339
EcoRV GATATC 2 cut(s) 513, 1522
EcoT14I CCWWGG 2 cut(s) 1241, 1668
EcoT38I GRGCYC 4 cut(s) 303, 609, 1287, 1771
ErhI CCWWGG 2 cut(s) 1241, 1668
Esp3I CGTCTC 1 cut(s) 1601
FaeI CATG 4 cut(s) 361, 1186, 1504, 1592
FatI CATG 4 cut(s) 357, 1182, 1500, 1588
FauI CCCGC 1 cut(s) 1590
FauNDI CATATG 2 cut(s) 907, 1443
FblI GTMKAC 2 cut(s) 1008, 1867
Fnu4HI GCNGC 9 cut(s) 741, 783, 795, 798, 801, 804, 1065, 1111, 1266
FokI GGATG 5 cut(s) 123, 161, 433, 1073, 1107
FriOI GRGCYC 4 cut(s) 303, 609, 1287, 1771
Fsp4HI GCNGC 9 cut(s) 741, 783, 795, 798, 801, 804, 1065, 1111, 1266
FspBI CTAG 8 cut(s) 267, 602, 728, 971, 1091, 1355, 1398, 1532
GlaI GCGC 1 cut(s) 723
GluI GCNGC 9 cut(s) 741, 783, 795, 798, 801, 804, 1065, 1111, 1266
GsaI CCCAGC 1 cut(s) 144
HaeIII GGCC 3 cut(s) 103, 1003, 1654
HapII CCGG 3 cut(s) 1058, 1232, 1310
HhaI GCGC 1 cut(s) 724
Hin1II CATG 4 cut(s) 361, 1186, 1504, 1592
Hin6I GCGC 1 cut(s) 722
HinP1I GCGC 1 cut(s) 722
HincII GTYRAC 1 cut(s) 1868
HindII GTYRAC 1 cut(s) 1868
HindIII AAGCTT 1 cut(s) 1615
HinfI GANTC 6 cut(s) 164, 386, 869, 1582, 1835, 1897
HpaII CCGG 3 cut(s) 1058, 1232, 1310
HphI GGTGA 5 cut(s) 249, 495, 1028, 1208, 1815
Hpy166II GTNNAC 5 cut(s) 930, 1009, 1019, 1324, 1868
Hpy188I TCNGA 7 cut(s) 154, 208, 421, 874, 1508, 1519, 1927
Hpy188III TCNNGA 8 cut(s) 57, 402, 1058, 1154, 1481, 1646, 1832, 1878
Hpy8I GTNNAC 5 cut(s) 930, 1009, 1019, 1324, 1868
Hpy99I CGWCG 2 cut(s) 408, 1781
HpyAV CCTTC 7 cut(s) 288, 375, 695, 983, 1148, 1304, 1729
HpyCH4III ACNGT 6 cut(s) 88, 892, 1132, 1163, 1328, 1437
HpyCH4IV ACGT 3 cut(s) 112, 406, 1054
HpyF10VI GCNNNNNNNGC 9 cut(s) 656, 728, 737, 746, 791, 800, 803, 1087, 1274
HpyF3I CTNAG 7 cut(s) 418, 517, 596, 732, 1250, 1305, 1749
HpySE526I ACGT 3 cut(s) 112, 406, 1054
Hsp92II CATG 4 cut(s) 361, 1186, 1504, 1592
HspAI GCGC 1 cut(s) 722
Kpn2I TCCGGA 1 cut(s) 1057
Kzo9I GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
LmnI GCTCC 5 cut(s) 86, 306, 577, 1145, 1194
Lsp1109I GCAGC 9 cut(s) 727, 784, 794, 806, 812, 815, 1076, 1097, 1252
LweI GCATC 7 cut(s) 68, 212, 1033, 1051, 1414, 1530, 1617
MaeI CTAG 8 cut(s) 267, 602, 728, 971, 1091, 1355, 1398, 1532
MaeII ACGT 3 cut(s) 112, 406, 1054
MaeIII GTNAC 5 cut(s) 255, 314, 1223, 1328, 1429
MalI GATC 6 cut(s) 292, 354, 1078, 1479, 1635, 1728
MbiI CCGCTC 1 cut(s) 1597
MboI GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
MboII GAAGA 7 cut(s) 285, 351, 581, 710, 887, 895, 898
MfeI CAATTG 2 cut(s) 11, 933
MhlI GDGCHC 6 cut(s) 303, 609, 1287, 1326, 1771, 1913
MlsI TGGCCA 1 cut(s) 1654
MluNI TGGCCA 1 cut(s) 1654
MlyI GAGTC 3 cut(s) 1576, 1829, 1906
MmeI TCCRAC 2 cut(s) 61, 474
Mox20I TGGCCA 1 cut(s) 1654
MroI TCCGGA 1 cut(s) 1057
MroXI GAANNNNTTC 1 cut(s) 277
MscI TGGCCA 1 cut(s) 1654
MseI TTAA 5 cut(s) 495, 681, 864, 1334, 1755
Msp20I TGGCCA 1 cut(s) 1654
MspA1I CMGCKG 2 cut(s) 797, 1457
MspI CCGG 3 cut(s) 1058, 1232, 1310
MspR9I CCNGG 2 cut(s) 1232, 1341
MunI CAATTG 2 cut(s) 11, 933
MvaI CCWGG 1 cut(s) 1341
MvnI CGCG 1 cut(s) 724
MwoI GCNNNNNNNGC 9 cut(s) 656, 728, 737, 746, 791, 800, 803, 1087, 1274
NciI CCSGG 1 cut(s) 1232
NdeI CATATG 2 cut(s) 907, 1443
NdeII GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
NlaIII CATG 4 cut(s) 361, 1186, 1504, 1592
NlaIV GGNNCC 1 cut(s) 1314
NmuCI GTSAC 4 cut(s) 255, 314, 1328, 1429
NspI RCATGY 2 cut(s) 361, 1504
NspV TTCGAA 1 cut(s) 1258
PaeI GCATGC 1 cut(s) 1504
PdmI GAANNNNTTC 1 cut(s) 277
PfeI GAWTC 3 cut(s) 164, 386, 869
PflMI CCANNNNNTGG 1 cut(s) 1877
PkrI GCNGC 9 cut(s) 742, 784, 796, 799, 802, 805, 1066, 1112, 1267
Ple19I CGATCG 1 cut(s) 1079
PleI GAGTC 3 cut(s) 1576, 1829, 1905
PpsI GAGTC 3 cut(s) 1576, 1829, 1905
Ppu21I YACGTR 1 cut(s) 113
Psp124BI GAGCTC 2 cut(s) 303, 609
Psp6I CCWGG 1 cut(s) 1339
PspFI CCCAGC 1 cut(s) 140
PspGI CCWGG 1 cut(s) 1339
PspN4I GGNNCC 1 cut(s) 1314
PspPI GGNCC 1 cut(s) 1001
PsrI GAACNNNNNNTAC 2 cut(s) 17, 49
PstI CTGCAG 3 cut(s) 802, 1270, 1642
PstNI CAGNNNCTG 1 cut(s) 1646
PvuI CGATCG 1 cut(s) 1079
PvuII CAGCTG 2 cut(s) 797, 1457
RgaI GCGATCGC 1 cut(s) 1079
RsaI GTAC 8 cut(s) 26, 629, 920, 929, 1160, 1181, 1818, 1903
RsaNI GTAC 8 cut(s) 25, 628, 919, 928, 1159, 1180, 1817, 1902
SacI GAGCTC 2 cut(s) 303, 609
SalI GTCGAC 1 cut(s) 1866
SaqAI TTAA 5 cut(s) 495, 681, 864, 1334, 1755
SatI GCNGC 9 cut(s) 741, 783, 795, 798, 801, 804, 1065, 1111, 1266
Sau3AI GATC 6 cut(s) 290, 352, 1076, 1477, 1633, 1726
Sau96I GGNCC 1 cut(s) 1001
ScaI AGTACT 1 cut(s) 1818
SchI GAGTC 3 cut(s) 1576, 1829, 1906
ScrFI CCNGG 2 cut(s) 1232, 1341
SduI GDGCHC 6 cut(s) 303, 609, 1287, 1326, 1771, 1913
SfaAI GCGATCGC 1 cut(s) 1079
SfaNI GCATC 7 cut(s) 68, 212, 1033, 1051, 1414, 1530, 1617
SfcI CTRYAG 3 cut(s) 798, 1266, 1638
SfuI TTCGAA 1 cut(s) 1258
SgfI GCGATCGC 1 cut(s) 1079
SmlI CTYRAG 4 cut(s) 581, 608, 1068, 1891
SmoI CTYRAG 4 cut(s) 581, 608, 1068, 1891
SphI GCATGC 1 cut(s) 1504
SsiI CCGC 4 cut(s) 95, 178, 1597, 1806
SspMI CTAG 8 cut(s) 267, 602, 728, 971, 1091, 1355, 1398, 1532
SstI GAGCTC 2 cut(s) 303, 609
StyD4I CCNGG 2 cut(s) 1230, 1339
StyI CCWWGG 2 cut(s) 1241, 1668
TaaI ACNGT 6 cut(s) 88, 892, 1132, 1163, 1328, 1437
TaiI ACGT 3 cut(s) 115, 409, 1057
TaqI TCGA 6 cut(s) 281, 403, 509, 1258, 1867, 1907
TaqII GACCGA 1 cut(s) 1734
TatI WGTACW 4 cut(s) 627, 927, 1179, 1816
TfiI GAWTC 3 cut(s) 164, 386, 869
Tru1I TTAA 5 cut(s) 495, 681, 864, 1334, 1755
Tru9I TTAA 5 cut(s) 495, 681, 864, 1334, 1755
TscAI CASTG 2 cut(s) 657, 1700
TseFI GTSAC 4 cut(s) 255, 314, 1328, 1429
TseI GCWGC 9 cut(s) 740, 782, 794, 797, 800, 803, 1064, 1110, 1265
Tsp45I GTSAC 4 cut(s) 255, 314, 1328, 1429
TspDTI ATGAA 5 cut(s) 163, 261, 690, 869, 1286
TspGWI ACGGA 1 cut(s) 440
TspRI CASTG 2 cut(s) 657, 1700
Van91I CCANNNNNTGG 1 cut(s) 1877
VneI GTGCAC 1 cut(s) 1322
XagI CCTNNNNNAGG 1 cut(s) 1298
XapI RAATTY 5 cut(s) 6, 497, 677, 962, 1840
XceI RCATGY 2 cut(s) 361, 1504
XcmI CCANNNNNNNNNTGG 1 cut(s) 1570
XmiI GTMKAC 2 cut(s) 1008, 1867
XmnI GAANNNNTTC 1 cut(s) 277
XspI CTAG 8 cut(s) 267, 602, 728, 971, 1091, 1355, 1398, 1532
ZrmI AGTACT 1 cut(s) 1818
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.