U-box domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1016 |
| AccI | GTMKAC | 1 cut(s) | 317 |
| AciI | CCGC | 2 cut(s) | 1197, 1736 |
| AclWI | GGATC | 3 cut(s) | 1328, 1590, 1718 |
| AcoI | YGGCCR | 2 cut(s) | 1251, 1508 |
| AcsI | RAATTY | 2 cut(s) | 368, 1645 |
| AfaI | GTAC | 4 cut(s) | 485, 612, 1037, 1179 |
| AfeI | AGCGCT | 1 cut(s) | 271 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 949, 1016, 1586, 1742 |
| AflIII | ACRYGT | 3 cut(s) | 83, 228, 480 |
| AgsI | TTSAA | 6 cut(s) | 119, 282, 384, 389, 803, 1072 |
| AjiI | CACGTC | 1 cut(s) | 315 |
| AjnI | CCWGG | 1 cut(s) | 1023 |
| AleI | CACNNNNGTG | 1 cut(s) | 890 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 293, 325 |
| Alw21I | GWGCWC | 4 cut(s) | 83, 465, 522, 1558 |
| Alw26I | GTCTC | 1 cut(s) | 1475 |
| AlwI | GGATC | 3 cut(s) | 1328, 1590, 1718 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 185, 1277 |
| Aor51HI | AGCGCT | 1 cut(s) | 271 |
| AoxI | GGCC | 3 cut(s) | 759, 1251, 1508 |
| ApeKI | GCWGC | 7 cut(s) | 4, 638, 650, 659, 920, 1121, 1310 |
| ApoI | RAATTY | 2 cut(s) | 368, 1645 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 388, 420 |
| AspLEI | GCGC | 1 cut(s) | 272 |
| AspS9I | GGNCC | 3 cut(s) | 759, 857, 880 |
| AsuC2I | CCSGG | 1 cut(s) | 1659 |
| AsuHPI | GGTGA | 3 cut(s) | 120, 168, 1416 |
| AsuNHI | GCTAGC | 1 cut(s) | 1540 |
| AvaII | GGWCC | 2 cut(s) | 857, 880 |
| BalI | TGGCCA | 2 cut(s) | 1253, 1510 |
| BanII | GRGCYC | 2 cut(s) | 465, 1173 |
| Bbv12I | GWGCWC | 4 cut(s) | 83, 465, 522, 1558 |
| BbvCI | CCTCAGC | 3 cut(s) | 376, 452, 588 |
| BbvI | GCAGC | 7 cut(s) | 16, 650, 662, 671, 932, 1108, 1322 |
| BccI | CCATC | 1 cut(s) | 242 |
| BciT130I | CCWGG | 1 cut(s) | 1025 |
| BclI | TGATCA | 1 cut(s) | 1716 |
| BcnI | CCSGG | 1 cut(s) | 1659 |
| BcoDI | GTCTC | 1 cut(s) | 1475 |
| BfaI | CTAG | 9 cut(s) | 66, 99, 458, 584, 1175, 1211, 1388, 1541, 1756 |
| BfoI | RGCGCY | 1 cut(s) | 273 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 647 |
| BisI | GCNGC | 7 cut(s) | 5, 639, 651, 660, 921, 1122, 1311 |
| BlpI | GCTNAGC | 1 cut(s) | 355 |
| BlsI | GCNGC | 7 cut(s) | 6, 640, 652, 661, 922, 1123, 1312 |
| Bme1390I | CCNGG | 2 cut(s) | 1025, 1659 |
| Bme18I | GGWCC | 2 cut(s) | 857, 880 |
| BmgBI | CACGTC | 1 cut(s) | 315 |
| BmgT120I | GGNCC | 3 cut(s) | 759, 857, 880 |
| BmiI | GGNNCC | 1 cut(s) | 1003 |
| BmrFI | CCNGG | 2 cut(s) | 1025, 1659 |
| BmrI | ACTGGG | 2 cut(s) | 1082, 1146 |
| BmsI | GCATC | 4 cut(s) | 755, 907, 919, 1074 |
| BmtI | GCTAGC | 1 cut(s) | 1544 |
| BmuI | ACTGGG | 2 cut(s) | 1082, 1146 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 494, 526 |
| BpmI | CTGGAG | 1 cut(s) | 498 |
| Bpu10I | CCTNAGC | 3 cut(s) | 376, 452, 588 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 355 |
| BpuEI | CTTGAG | 2 cut(s) | 449, 909 |
| BpuMI | CCSGG | 1 cut(s) | 1659 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1728 |
| BsaJI | CCNNGG | 1 cut(s) | 1097 |
| BsaWI | WCCGGW | 1 cut(s) | 1579 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 293, 323 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 949, 1016, 1586, 1742 |
| Bse118I | RCCGGY | 1 cut(s) | 57 |
| Bse1I | ACTGG | 8 cut(s) | 860, 882, 890, 1088, 1141, 1357, 1511, 1511 |
| Bse3DI | GCAATG | 1 cut(s) | 159 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1728 |
| BseBI | CCWGG | 1 cut(s) | 1025 |
| BseDI | CCNNGG | 1 cut(s) | 1097 |
| BseGI | GGATG | 3 cut(s) | 427, 910, 976 |
| BseJI | GATNNNNATC | 1 cut(s) | 1728 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 949, 1016, 1586, 1742 |
| BseMI | GCAATG | 1 cut(s) | 159 |
| BseNI | ACTGG | 8 cut(s) | 860, 882, 890, 1088, 1141, 1357, 1511, 1511 |
| BseXI | GCAGC | 7 cut(s) | 16, 650, 662, 671, 932, 1108, 1322 |
| BseYI | CCCAGC | 1 cut(s) | 1360 |
| BsgI | GTGCAG | 1 cut(s) | 1117 |
| BshFI | GGCC | 3 cut(s) | 761, 1253, 1510 |
| BsiHKAI | GWGCWC | 4 cut(s) | 83, 465, 522, 1558 |
| BsiSI | CCGG | 4 cut(s) | 58, 1314, 1580, 1658 |
| BslFI | GGGAC | 2 cut(s) | 1247, 1483 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 949, 1016, 1586, 1742 |
| BsmAI | GTCTC | 1 cut(s) | 1475 |
| BsmBI | CGTCTC | 1 cut(s) | 1475 |
| BsmFI | GGGAC | 2 cut(s) | 1247, 1483 |
| BsmI | GAATGC | 1 cut(s) | 1738 |
| BsnI | GGCC | 3 cut(s) | 761, 1253, 1510 |
| Bsp1286I | GDGCHC | 5 cut(s) | 83, 465, 522, 1173, 1558 |
| Bsp1407I | TGTACA | 2 cut(s) | 483, 610 |
| Bsp143I | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 355 |
| BspACI | CCGC | 2 cut(s) | 1197, 1736 |
| BspANI | GGCC | 3 cut(s) | 761, 1253, 1510 |
| BspLI | GGNNCC | 1 cut(s) | 1003 |
| BspOI | GCTAGC | 1 cut(s) | 1544 |
| BspPI | GGATC | 3 cut(s) | 1328, 1590, 1718 |
| BsrDI | GCAATG | 1 cut(s) | 159 |
| BsrFI | RCCGGY | 1 cut(s) | 57 |
| BsrGI | TGTACA | 2 cut(s) | 483, 610 |
| BsrI | ACTGG | 8 cut(s) | 860, 882, 890, 1088, 1141, 1357, 1511, 1511 |
| BssAI | RCCGGY | 1 cut(s) | 57 |
| BssECI | CCNNGG | 1 cut(s) | 1097 |
| BssMI | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| BssT1I | CCWWGG | 1 cut(s) | 1097 |
| Bst2UI | CCWGG | 1 cut(s) | 1025 |
| Bst4CI | ACNGT | 4 cut(s) | 493, 933, 1184, 1551 |
| Bst6I | CTCTTC | 1 cut(s) | 567 |
| BstAUI | TGTACA | 2 cut(s) | 483, 610 |
| BstC8I | GCNNGC | 5 cut(s) | 63, 104, 212, 971, 1542 |
| BstF5I | GGATG | 3 cut(s) | 427, 910, 976 |
| BstH2I | RGCGCY | 1 cut(s) | 273 |
| BstHHI | GCGC | 1 cut(s) | 272 |
| BstKTI | GATC | 5 cut(s) | 1063, 1336, 1585, 1719, 1726 |
| BstMAI | GTCTC | 1 cut(s) | 1475 |
| BstMBI | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 584, 647, 656, 659, 752, 902, 943, 1541 |
| BstNI | CCWGG | 1 cut(s) | 1025 |
| BstNSI | RCATGY | 3 cut(s) | 232, 484, 973 |
| BstSCI | CCNGG | 2 cut(s) | 1023, 1657 |
| BstV1I | GCAGC | 7 cut(s) | 16, 650, 662, 671, 932, 1108, 1322 |
| BstX2I | RGATCY | 1 cut(s) | 1582 |
| BstYI | RGATCY | 1 cut(s) | 1582 |
| BsuRI | GGCC | 3 cut(s) | 761, 1253, 1510 |
| BtrI | CACGTC | 1 cut(s) | 315 |
| BtsCI | GGATG | 3 cut(s) | 427, 910, 976 |
| BtsIMutI | CAGTG | 5 cut(s) | 897, 1134, 1476, 1556, 1726 |
| Cac8I | GCNNGC | 5 cut(s) | 63, 104, 212, 971, 1542 |
| CaiI | CAGNNNCTG | 2 cut(s) | 185, 1277 |
| CfoI | GCGC | 1 cut(s) | 272 |
| Cfr10I | RCCGGY | 1 cut(s) | 57 |
| Cfr13I | GGNCC | 3 cut(s) | 759, 857, 880 |
| CseI | GACGC | 1 cut(s) | 1492 |
| Csp6I | GTAC | 4 cut(s) | 484, 611, 1036, 1178 |
| CviQI | GTAC | 4 cut(s) | 484, 611, 1036, 1178 |
| DpnI | GATC | 5 cut(s) | 1062, 1335, 1584, 1718, 1725 |
| DpnII | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| EaeI | YGGCCR | 2 cut(s) | 1251, 1508 |
| Eam1104I | CTCTTC | 1 cut(s) | 567 |
| EarI | CTCTTC | 1 cut(s) | 567 |
| Ecl136II | GAGCTC | 1 cut(s) | 463 |
| Eco130I | CCWWGG | 1 cut(s) | 1097 |
| Eco24I | GRGCYC | 2 cut(s) | 465, 1173 |
| Eco32I | GATATC | 2 cut(s) | 769, 828 |
| Eco47I | GGWCC | 2 cut(s) | 857, 880 |
| Eco47III | AGCGCT | 1 cut(s) | 271 |
| Eco53kI | GAGCTC | 1 cut(s) | 463 |
| EcoICRI | GAGCTC | 1 cut(s) | 463 |
| EcoO109I | RGGNCCY | 1 cut(s) | 759 |
| EcoRI | GAATTC | 1 cut(s) | 1645 |
| EcoRII | CCWGG | 1 cut(s) | 1023 |
| EcoRV | GATATC | 2 cut(s) | 769, 828 |
| EcoT14I | CCWWGG | 1 cut(s) | 1097 |
| EcoT38I | GRGCYC | 2 cut(s) | 465, 1173 |
| ErhI | CCWWGG | 1 cut(s) | 1097 |
| Esp3I | CGTCTC | 1 cut(s) | 1475 |
| FaqI | GGGAC | 2 cut(s) | 1247, 1483 |
| FauI | CCCGC | 1 cut(s) | 1204 |
| FbaI | TGATCA | 1 cut(s) | 1716 |
| FblI | GTMKAC | 1 cut(s) | 317 |
| Fnu4HI | GCNGC | 7 cut(s) | 5, 639, 651, 660, 921, 1122, 1311 |
| FokI | GGATG | 3 cut(s) | 434, 897, 963 |
| FriOI | GRGCYC | 2 cut(s) | 465, 1173 |
| Fsp4HI | GCNGC | 7 cut(s) | 5, 639, 651, 660, 921, 1122, 1311 |
| FspBI | CTAG | 9 cut(s) | 66, 99, 458, 584, 1175, 1211, 1388, 1541, 1756 |
| GlaI | GCGC | 1 cut(s) | 271 |
| GluI | GCNGC | 7 cut(s) | 5, 639, 651, 660, 921, 1122, 1311 |
| GsaI | CCCAGC | 1 cut(s) | 1364 |
| GsuI | CTGGAG | 1 cut(s) | 498 |
| HaeII | RGCGCY | 1 cut(s) | 273 |
| HaeIII | GGCC | 3 cut(s) | 761, 1253, 1510 |
| HapII | CCGG | 4 cut(s) | 58, 1314, 1580, 1658 |
| HgaI | GACGC | 1 cut(s) | 1492 |
| HhaI | GCGC | 1 cut(s) | 272 |
| Hin6I | GCGC | 1 cut(s) | 270 |
| HinP1I | GCGC | 1 cut(s) | 270 |
| HincII | GTYRAC | 1 cut(s) | 318 |
| HindII | GTYRAC | 1 cut(s) | 318 |
| HinfI | GANTC | 8 cut(s) | 29, 71, 257, 628, 683, 803, 1116, 1280 |
| HpaII | CCGG | 4 cut(s) | 58, 1314, 1580, 1658 |
| HphI | GGTGA | 3 cut(s) | 120, 168, 1416 |
| Hpy166II | GTNNAC | 4 cut(s) | 318, 865, 1180, 1381 |
| Hpy188I | TCNGA | 6 cut(s) | 28, 76, 292, 751, 1115, 1375 |
| Hpy188III | TCNNGA | 9 cut(s) | 261, 330, 515, 914, 1010, 1337, 1502, 1683, 1743 |
| Hpy8I | GTNNAC | 4 cut(s) | 318, 865, 1180, 1381 |
| Hpy99I | CGWCG | 2 cut(s) | 203, 319 |
| HpyAV | CCTTC | 6 cut(s) | 736, 839, 1004, 1275, 1460, 1585 |
| HpyCH4III | ACNGT | 4 cut(s) | 493, 933, 1184, 1551 |
| HpyCH4IV | ACGT | 3 cut(s) | 85, 198, 314 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 18, 498, 599, 834, 910, 920, 1134 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 584, 647, 656, 659, 752, 902, 943, 1541 |
| HpySE526I | ACGT | 3 cut(s) | 85, 198, 314 |
| HspAI | GCGC | 1 cut(s) | 270 |
| Ksp22I | TGATCA | 1 cut(s) | 1716 |
| Kzo9I | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| LmnI | GCTCC | 3 cut(s) | 314, 1001, 1050 |
| Lsp1109I | GCAGC | 7 cut(s) | 16, 650, 662, 671, 932, 1108, 1322 |
| LweI | GCATC | 4 cut(s) | 755, 907, 919, 1074 |
| MaeI | CTAG | 9 cut(s) | 66, 99, 458, 584, 1175, 1211, 1388, 1541, 1756 |
| MaeII | ACGT | 3 cut(s) | 85, 198, 314 |
| MaeIII | GTNAC | 6 cut(s) | 86, 126, 404, 1079, 1184, 1422 |
| MalI | GATC | 5 cut(s) | 1062, 1335, 1584, 1718, 1725 |
| MboI | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| MboII | GAAGA | 8 cut(s) | 437, 566, 584, 1060, 1070, 1142, 1377, 1646 |
| MfeI | CAATTG | 2 cut(s) | 384, 789 |
| MflI | RGATCY | 1 cut(s) | 1582 |
| MhlI | GDGCHC | 5 cut(s) | 83, 465, 522, 1173, 1558 |
| MlsI | TGGCCA | 2 cut(s) | 1253, 1510 |
| MluCI | AATT | 9 cut(s) | 264, 368, 384, 548, 789, 798, 817, 938, 1645 |
| MluNI | TGGCCA | 2 cut(s) | 1253, 1510 |
| Mox20I | TGGCCA | 2 cut(s) | 1253, 1510 |
| MscI | TGGCCA | 2 cut(s) | 1253, 1510 |
| MseI | TTAA | 5 cut(s) | 537, 720, 954, 1461, 1611 |
| MslI | CAYNNNNRTG | 3 cut(s) | 890, 915, 1221 |
| Msp20I | TGGCCA | 2 cut(s) | 1253, 1510 |
| MspI | CCGG | 4 cut(s) | 58, 1314, 1580, 1658 |
| MspR9I | CCNGG | 2 cut(s) | 1025, 1659 |
| MunI | CAATTG | 2 cut(s) | 384, 789 |
| Mva1269I | GAATGC | 1 cut(s) | 1738 |
| MvaI | CCWGG | 1 cut(s) | 1025 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 584, 647, 656, 659, 752, 902, 943, 1541 |
| NciI | CCSGG | 1 cut(s) | 1659 |
| NdeII | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| NheI | GCTAGC | 1 cut(s) | 1540 |
| NlaIV | GGNNCC | 1 cut(s) | 1003 |
| NmuCI | GTSAC | 4 cut(s) | 126, 404, 1184, 1422 |
| NspI | RCATGY | 3 cut(s) | 232, 484, 973 |
| OliI | CACNNNNGTG | 1 cut(s) | 890 |
| PaeI | GCATGC | 1 cut(s) | 973 |
| PciI | ACATGT | 2 cut(s) | 228, 480 |
| PctI | GAATGC | 1 cut(s) | 1738 |
| PfeI | GAWTC | 8 cut(s) | 29, 71, 257, 628, 683, 803, 1116, 1280 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1016 |
| PkrI | GCNGC | 7 cut(s) | 6, 640, 652, 661, 922, 1123, 1312 |
| PscI | ACATGT | 2 cut(s) | 228, 480 |
| Psp124BI | GAGCTC | 1 cut(s) | 465 |
| Psp6I | CCWGG | 1 cut(s) | 1023 |
| PspFI | CCCAGC | 1 cut(s) | 1360 |
| PspGI | CCWGG | 1 cut(s) | 1023 |
| PspN4I | GGNNCC | 1 cut(s) | 1003 |
| PspPI | GGNCC | 3 cut(s) | 759, 857, 880 |
| PstNI | CAGNNNCTG | 2 cut(s) | 185, 1277 |
| PsuI | RGATCY | 1 cut(s) | 1582 |
| RsaI | GTAC | 4 cut(s) | 485, 612, 1037, 1179 |
| RsaNI | GTAC | 4 cut(s) | 484, 611, 1036, 1178 |
| RseI | CAYNNNNRTG | 3 cut(s) | 890, 915, 1221 |
| SacI | GAGCTC | 1 cut(s) | 465 |
| SalI | GTCGAC | 1 cut(s) | 316 |
| SaqAI | TTAA | 5 cut(s) | 537, 720, 954, 1461, 1611 |
| SatI | GCNGC | 7 cut(s) | 5, 639, 651, 660, 921, 1122, 1311 |
| Sau3AI | GATC | 5 cut(s) | 1060, 1333, 1582, 1716, 1723 |
| Sau96I | GGNCC | 3 cut(s) | 759, 857, 880 |
| ScrFI | CCNGG | 2 cut(s) | 1025, 1659 |
| SduI | GDGCHC | 5 cut(s) | 83, 465, 522, 1173, 1558 |
| SfaNI | GCATC | 4 cut(s) | 755, 907, 919, 1074 |
| SinI | GGWCC | 2 cut(s) | 857, 880 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 890, 915, 1221 |
| SmlI | CTYRAG | 2 cut(s) | 464, 924 |
| SmoI | CTYRAG | 2 cut(s) | 464, 924 |
| SphI | GCATGC | 1 cut(s) | 973 |
| Sse9I | AATT | 9 cut(s) | 264, 368, 384, 548, 789, 798, 817, 938, 1645 |
| SsiI | CCGC | 2 cut(s) | 1197, 1736 |
| SspI | AATATT | 1 cut(s) | 278 |
| SspMI | CTAG | 9 cut(s) | 66, 99, 458, 584, 1175, 1211, 1388, 1541, 1756 |
| SstI | GAGCTC | 1 cut(s) | 465 |
| StyD4I | CCNGG | 2 cut(s) | 1023, 1657 |
| StyI | CCWWGG | 1 cut(s) | 1097 |
| TaaI | ACNGT | 4 cut(s) | 493, 933, 1184, 1551 |
| TaiI | ACGT | 3 cut(s) | 88, 201, 317 |
| TaqI | TCGA | 3 cut(s) | 317, 394, 824 |
| TasI | AATT | 9 cut(s) | 264, 368, 384, 548, 789, 798, 817, 938, 1645 |
| TatI | WGTACW | 4 cut(s) | 483, 610, 1035, 1177 |
| TfiI | GAWTC | 8 cut(s) | 29, 71, 257, 628, 683, 803, 1116, 1280 |
| Tru1I | TTAA | 5 cut(s) | 537, 720, 954, 1461, 1611 |
| Tru9I | TTAA | 5 cut(s) | 537, 720, 954, 1461, 1611 |
| TscAI | CASTG | 5 cut(s) | 897, 1141, 1483, 1556, 1726 |
| TseFI | GTSAC | 4 cut(s) | 126, 404, 1184, 1422 |
| TseI | GCWGC | 7 cut(s) | 4, 638, 650, 659, 920, 1121, 1310 |
| Tsp45I | GTSAC | 4 cut(s) | 126, 404, 1184, 1422 |
| TspDTI | ATGAA | 7 cut(s) | 170, 381, 438, 1142, 1257, 1577, 1658 |
| TspRI | CASTG | 5 cut(s) | 897, 1141, 1483, 1556, 1726 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1016 |
| VpaK11BI | GGWCC | 2 cut(s) | 857, 880 |
| XapI | RAATTY | 2 cut(s) | 368, 1645 |
| XceI | RCATGY | 3 cut(s) | 232, 484, 973 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1095, 1426 |
| XmiI | GTMKAC | 1 cut(s) | 317 |
| XspI | CTAG | 9 cut(s) | 66, 99, 458, 584, 1175, 1211, 1388, 1541, 1756 |