Rh1BG093600

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000353
Physical Location & Seq
Forward (+)
16329275 .. 16333953
4679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG093600.1

Sequence Viewer

Length: 2346 bp
ATGGCAAGATCATGTGCCACAAGTGATGAAAAGAGAGAAGAGGTGGTGGCGGTGGCAATAGACAAGGACAAGGGAAGTCAATACGCTCTCAAATGGACTGTCGAGCATCTTCTTGTCAAGGGCCAAAGTCTCACCCTTGTACATGTTAAACAATCAACACCAGGCCTTCCCAATCAAACTGAGAAATCGGTTTCTGGCTCTGAATTAAAGGAGGAAGGTATAAAATTGTGCAAAAGCCAATCTGATGCTGAATATAGCGAGTTGTTTCTTCCACTTCGTACTTTTTGTAAGAAAAAGCTTGTAAGATACAACGAAGTAATAGTTAAAGGTACTGATGTAGCAAAAGCACTCGTCAATTTTATTTCGACACATTCAATTGAGGTTTTGGTACTTGCGGCACCTTCAAAAAGTGGCTTTTTCAGAGCCTTCAACAAAACTACAGACATTCCAAGCAGAGTGTCGAAAGGGGCACCGGATTTCTGCACTGTGTATGTCATTGGCAAGGGAAAGATCAGTCATGTGCAAACAGCAACCACTAAATTACCCCCAGAAGCTCGTAATAAGCAAATACATAACCAACTCAGCAATGTTTCGGACTCAAGTGTTTCTCAATTTATGCGTAACCAGCAACCCAGAGCATCAGAGAGGACAAGAACAAAGTACCGGCACCGTAGCGCTCGGATAGATCATGATACAGGAATCAAGACACCATTCACCAGAGGACAAGCTTCATCAAACAGATTATATGAGATCTCACCAGACAGCGATGTATCATTCACAAGTAGTGGAGGAAGACCAAGCATTGATCACATGTTTCCTTCTATATGCGGCAGTGTGGAATCAGGAATGCACTCTCAACAATCATTCAACTCAGACTTAGACAACAGAAGATCTACCTCCAATCAATCCTACTCAAGAACTCAGTTCATTGATATGAACTCCTCATTATCCTCAACTGAGAGTGGAAAATCATGGTCATCCCGAAATATGGAAGAAGTAGAAGAAGAGATGATGAGACTCAAGCTAGAGCTCAAGCAGACAATGGAGGTGTACAATACGGCCTGTAAGGAAACCCTAACATCAAAACAGAAGCAACTTGACCGATGGAAATGGGAAGAAGGACAAAGATTGGAAAGGGCACACCTAGGTCAGGAGTTTGCATTGGCACTTGTACAGAAAGAGGAAGCAAAATGTAGGGCAGCAATGGACGCAGAAAGAGCAGCTAAAAGGATTGCTGAATTGGAAGCAGAACAAAGGAGGAATTCAGAAATAAAGGGTCTGAAAGAAGCTGAAAAGAGGACGAACTCACTAGGAGGAAGGAGTTTTGATCCGCGGTACAGGAAATACACAATTGAAGAGATTAAAGCAGCAACGAACAGTTTTTCAAAAGCTCTTAAGATTGGAGAAGGTGGCTATGGGCCTGTGTATGTGGGTGAGCTGGACCACACACAAGTGGCAATAAAAGCTCTACGTCCAGATGCAGCTCAAGGACGTTCACAGTTCCAACAAGAGATTGAGGTTTTGAGCTGCATAAGACATCCAAACATGGTTCTCCTGCTTGGAGCCTGCCCAGAGTATGGTTGTCTGATCTATGAGTACATGGGTAATGGGAGCTTAGAAGACCGTCTGTTTCGACGAGGTAACACCCCAGTTATTCCTTGGCAGCTAAGGTTCCGAATCGCTGCAGAAATTGCCACGGGGCTTTTGTTCCTTCACCAGGCCAAGCCAGAACCCTTTGTACACCGTGACTTAAAGCCAGGAAACATTTTGCTAGACCATAACTATGTCAGCAAGATCAGTGATGTAGGTCTGGCCAGGCTTGTCCCTCCATCGGTAGCTGACTCAGTCACTCAGTATCACATGACATCAGCAGCTGGGACATTCTGTTATATCGACCCAGAGTATCAACAAACTGGCTTGCTTGGAACAAAATCTGATATCTACTCACTTGGGGTCATGCTTCTACAAATAATAACAGCCAAACCAGCAATGGGTTTGACTCATCTTGTTGAGCACGCGATTGAGATAGGGACCTTCGCTGAGATGCTTGACCCCGCTGTTCCTGACTGGCCTGTGGAGGAAGCCTTGAAGTTTGCCAAGTTAGCATTACAATGTGCCGAAATGAGGCGAAAAGACAGACCCGATCTTGGCAAGGTAGTGCTACCTGAGCTTAACAGATTGAGAGGACTCGGCGAAAAGGGTGGGATGCTTAATGGTGGGGGAGCATTCTTACTACAAAAGTGCTCAGTTTCCACAAAGCAAGAAGTGATGAATGACCCCCAATCTGGATATGCCAGTTCAGTGAGCAATTCGAGCACATCATCTTATGGAGGAAGAATATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr Usp

Protein Analysis

781

Amino Acids

86.9

Weight (kDa)

8.88

Isoelectric Point (pI)

47.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 463 - 714 3e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 466 - 719 4.3e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 397, 469, 666
AccB7I CCANNNNNTGG 1 cut(s) 1577
AccII CGCG 2 cut(s) 1333, 2018
AciI CCGC 6 cut(s) 50, 395, 828, 1331, 1333, 2055
AclWI GGATC 1 cut(s) 1322
AcoI YGGCCR 1 cut(s) 1812
AcsI RAATTY 1 cut(s) 1261
AfeI AGCGCT 1 cut(s) 676
AfiI CCNNNNNNNGG 9 cut(s) 988, 1150, 1577, 1717, 1831, 1991, 2124, 2147, 2285
AflII CTTAAG 1 cut(s) 1394
AflIII ACRYGT 2 cut(s) 142, 810
AgsI TTSAA 7 cut(s) 375, 405, 430, 868, 1355, 1386, 2089
AjnI CCWGG 4 cut(s) 160, 1716, 1756, 1814
AleI CACNNNNGTG 1 cut(s) 1451
Alw21I GWGCWC 4 cut(s) 1032, 2016, 2246, 2318
Alw26I GTCTC 2 cut(s) 134, 1009
AlwI GGATC 1 cut(s) 1322
AlwNI CAGNNNCTG 1 cut(s) 1874
Aor51HI AGCGCT 1 cut(s) 676
AoxI GGCC 7 cut(s) 121, 163, 1059, 1418, 1719, 1812, 2069
ApeKI GCWGC 8 cut(s) 1199, 1220, 1367, 1481, 1527, 1663, 1682, 1871
ApoI RAATTY 1 cut(s) 1261
ArsI GACNNNNNNTTYG 2 cut(s) 84, 116
AspA2I CCTAGG 1 cut(s) 1144
AspLEI GCGC 1 cut(s) 677
AspS9I GGNCC 4 cut(s) 121, 1418, 1441, 2031
AsuHPI GGTGA 5 cut(s) 124, 706, 747, 1445, 1706
AvaII GGWCC 2 cut(s) 1441, 2031
AvrII CCTAGG 1 cut(s) 1144
BaeGI GKGCMC 2 cut(s) 472, 1141
BaeI ACNNNNGTAYC 2 cut(s) 321, 354
BalI TGGCCA 1 cut(s) 1814
BanI GGYRCC 3 cut(s) 397, 469, 666
BanII GRGCYC 1 cut(s) 1032
BbsI GAAGAC 2 cut(s) 799, 1626
Bbv12I GWGCWC 4 cut(s) 1032, 2016, 2246, 2318
BbvI GCAGC 8 cut(s) 1211, 1232, 1379, 1493, 1514, 1669, 1675, 1883
BccI CCATC 2 cut(s) 1098, 1837
BceAI ACGGC 1 cut(s) 1074
BciT130I CCWGG 4 cut(s) 162, 1718, 1758, 1816
BclI TGATCA 1 cut(s) 805
BcoDI GTCTC 2 cut(s) 134, 1009
BfaI CTAG 4 cut(s) 1025, 1145, 1310, 1772
BfmI CTRYAG 2 cut(s) 438, 1683
BfoI RGCGCY 1 cut(s) 678
BfrI CTTAAG 1 cut(s) 1394
BglII AGATCT 2 cut(s) 750, 890
BlnI CCTAGG 1 cut(s) 1144
Bme1390I CCNGG 4 cut(s) 162, 1718, 1758, 1816
Bme18I GGWCC 2 cut(s) 1441, 2031
BmgT120I GGNCC 4 cut(s) 121, 1418, 1441, 2031
BmiI GGNNCC 6 cut(s) 399, 471, 668, 1564, 1673, 2032
BmrFI CCNGG 4 cut(s) 162, 1718, 1758, 1816
BmrI ACTGGG 1 cut(s) 1643
BmsI GCATC 6 cut(s) 115, 235, 647, 1468, 2034, 2196
BmuI ACTGGG 1 cut(s) 1643
BpiI GAAGAC 2 cut(s) 799, 1626
Bpu10I CCTNAGC 2 cut(s) 1667, 2166
BpuEI CTTGAG 5 cut(s) 583, 898, 1004, 1016, 1470
BsaJI CCNNGG 4 cut(s) 1144, 1331, 1658, 1695
BsaWI WCCGGW 1 cut(s) 472
Bsc4I CCNNNNNNNGG 9 cut(s) 988, 1150, 1577, 1717, 1831, 1991, 2124, 2147, 2285
Bse118I RCCGGY 1 cut(s) 663
Bse1I ACTGG 4 cut(s) 1649, 1918, 2072, 2295
Bse3DI GCAATG 3 cut(s) 592, 1209, 1995
BseBI CCWGG 4 cut(s) 162, 1718, 1758, 1816
BseDI CCNNGG 4 cut(s) 1144, 1331, 1658, 1695
BseGI GGATG 3 cut(s) 977, 1537, 2211
BseLI CCNNNNNNNGG 9 cut(s) 988, 1150, 1577, 1717, 1831, 1991, 2124, 2147, 2285
BseMI GCAATG 3 cut(s) 592, 1209, 1995
BseNI ACTGG 4 cut(s) 1649, 1918, 2072, 2295
BseRI GAGGAG 1 cut(s) 931
BseSI GKGCMC 2 cut(s) 472, 1141
BseXI GCAGC 8 cut(s) 1211, 1232, 1379, 1493, 1514, 1669, 1675, 1883
BseYI CCCAGC 1 cut(s) 1874
BsgI GTGCAG 1 cut(s) 466
Bsh1236I CGCG 2 cut(s) 1333, 2018
BshFI GGCC 7 cut(s) 123, 165, 1061, 1420, 1721, 1814, 2071
BshNI GGYRCC 3 cut(s) 397, 469, 666
BsiHKAI GWGCWC 4 cut(s) 1032, 2016, 2246, 2318
BsiSI CCGG 2 cut(s) 473, 664
BslFI GGGAC 3 cut(s) 1808, 1891, 2044
BslI CCNNNNNNNGG 9 cut(s) 988, 1150, 1577, 1717, 1831, 1991, 2124, 2147, 2285
BsmAI GTCTC 2 cut(s) 134, 1009
BsmFI GGGAC 3 cut(s) 1808, 1891, 2044
BsmI GAATGC 2 cut(s) 852, 2225
BsnI GGCC 7 cut(s) 123, 165, 1061, 1420, 1721, 1814, 2071
Bsp1286I GDGCHC 6 cut(s) 472, 1032, 1141, 2016, 2246, 2318
Bsp1407I TGTACA 4 cut(s) 139, 1050, 1171, 1738
BspACI CCGC 6 cut(s) 50, 395, 828, 1331, 1333, 2055
BspANI GGCC 7 cut(s) 123, 165, 1061, 1420, 1721, 1814, 2071
BspFNI CGCG 2 cut(s) 1333, 2018
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 6 cut(s) 399, 471, 668, 1564, 1673, 2032
BspMAI CTGCAG 1 cut(s) 1687
BspPI GGATC 1 cut(s) 1322
BspT107I GGYRCC 3 cut(s) 397, 469, 666
BspTI CTTAAG 1 cut(s) 1394
BsrDI GCAATG 3 cut(s) 592, 1209, 1995
BsrFI RCCGGY 1 cut(s) 663
BsrGI TGTACA 4 cut(s) 139, 1050, 1171, 1738
BsrI ACTGG 4 cut(s) 1649, 1918, 2072, 2295
BssAI RCCGGY 1 cut(s) 663
BssECI CCNNGG 4 cut(s) 1144, 1331, 1658, 1695
BssT1I CCWWGG 2 cut(s) 1144, 1658
Bst2UI CCWGG 4 cut(s) 162, 1718, 1758, 1816
Bst4CI ACNGT 7 cut(s) 100, 487, 671, 1379, 1500, 1625, 1745
Bst6I CTCTTC 3 cut(s) 33, 999, 1350
BstAFI CTTAAG 1 cut(s) 1394
BstAPI GCANNNNNTGC 1 cut(s) 1691
BstAUI TGTACA 4 cut(s) 139, 1050, 1171, 1738
BstC8I GCNNGC 3 cut(s) 1567, 1919, 2016
BstDSI CCRYGG 2 cut(s) 1331, 1695
BstENI CCTNNNNNAGG 2 cut(s) 1148, 1715
BstF5I GGATG 3 cut(s) 977, 1537, 2211
BstFNI CGCG 2 cut(s) 1333, 2018
BstH2I RGCGCY 1 cut(s) 678
BstHHI GCGC 1 cut(s) 677
BstMAI GTCTC 2 cut(s) 134, 1009
BstMWI GCNNNNNNNGC 9 cut(s) 625, 1208, 1217, 1463, 1691, 1985, 2102, 2167, 2313
BstNI CCWGG 4 cut(s) 162, 1718, 1758, 1816
BstNSI RCATGY 2 cut(s) 146, 814
BstSCI CCNGG 4 cut(s) 160, 1716, 1756, 1814
BstSFI CTRYAG 2 cut(s) 438, 1683
BstSLI GKGCMC 2 cut(s) 472, 1141
BstUI CGCG 2 cut(s) 1333, 2018
BstV1I GCAGC 8 cut(s) 1211, 1232, 1379, 1493, 1514, 1669, 1675, 1883
BstV2I GAAGAC 2 cut(s) 799, 1626
BstX2I RGATCY 2 cut(s) 750, 890
BstYI RGATCY 2 cut(s) 750, 890
BsuRI GGCC 7 cut(s) 123, 165, 1061, 1420, 1721, 1814, 2071
BtgI CCRYGG 2 cut(s) 1331, 1695
BtgZI GCGATG 1 cut(s) 780
BtsCI GGATG 3 cut(s) 977, 1537, 2211
BtsI GCAGTG 1 cut(s) 838
BtsIMutI CAGTG 4 cut(s) 483, 838, 1804, 2307
Cac8I GCNNGC 3 cut(s) 1567, 1919, 2016
CaiI CAGNNNCTG 1 cut(s) 1874
CciI TCATGA 1 cut(s) 688
CfoI GCGC 1 cut(s) 677
Cfr10I RCCGGY 1 cut(s) 663
Cfr13I GGNCC 4 cut(s) 121, 1418, 1441, 2031
Cfr42I CCGCGG 1 cut(s) 1334
CseI GACGC 1 cut(s) 1217
EaeI YGGCCR 1 cut(s) 1812
Eam1104I CTCTTC 3 cut(s) 33, 999, 1350
EarI CTCTTC 3 cut(s) 33, 999, 1350
Ecl136II GAGCTC 1 cut(s) 1030
Eco130I CCWWGG 2 cut(s) 1144, 1658
Eco147I AGGCCT 1 cut(s) 165
Eco24I GRGCYC 1 cut(s) 1032
Eco32I GATATC 1 cut(s) 1939
Eco47I GGWCC 2 cut(s) 1441, 2031
Eco47III AGCGCT 1 cut(s) 676
Eco53kI GAGCTC 1 cut(s) 1030
EcoICRI GAGCTC 1 cut(s) 1030
EcoNI CCTNNNNNAGG 2 cut(s) 1148, 1715
EcoO109I RGGNCCY 1 cut(s) 2031
EcoRI GAATTC 1 cut(s) 1261
EcoRII CCWGG 4 cut(s) 160, 1716, 1756, 1814
EcoRV GATATC 1 cut(s) 1939
EcoT14I CCWWGG 2 cut(s) 1144, 1658
EcoT38I GRGCYC 1 cut(s) 1032
ErhI CCWWGG 2 cut(s) 1144, 1658
FaqI GGGAC 3 cut(s) 1808, 1891, 2044
FauI CCCGC 1 cut(s) 2062
FbaI TGATCA 1 cut(s) 805
FokI GGATG 3 cut(s) 964, 1524, 2218
FriOI GRGCYC 1 cut(s) 1032
FspBI CTAG 4 cut(s) 1025, 1145, 1310, 1772
GlaI GCGC 1 cut(s) 676
GsaI CCCAGC 1 cut(s) 1878
HaeII RGCGCY 1 cut(s) 678
HaeIII GGCC 7 cut(s) 123, 165, 1061, 1420, 1721, 1814, 2071
HapII CCGG 2 cut(s) 473, 664
HgaI GACGC 1 cut(s) 1217
HhaI GCGC 1 cut(s) 677
Hin6I GCGC 1 cut(s) 675
HinP1I GCGC 1 cut(s) 675
HindIII AAGCTT 2 cut(s) 296, 726
HinfI GANTC 8 cut(s) 596, 699, 839, 1017, 1677, 1841, 1999, 2187
HpaII CCGG 2 cut(s) 473, 664
HphI GGTGA 5 cut(s) 124, 706, 747, 1445, 1706
Hpy166II GTNNAC 3 cut(s) 1051, 1496, 1741
Hpy188III TCNNGA 9 cut(s) 689, 703, 843, 915, 981, 1151, 1475, 2063, 2286
Hpy8I GTNNAC 3 cut(s) 1051, 1496, 1741
Hpy99I CGWCG 1 cut(s) 1638
HpyCH4III ACNGT 7 cut(s) 100, 487, 671, 1379, 1500, 1625, 1745
HpyCH4IV ACGT 2 cut(s) 1471, 1492
HpyCH4V TGCA 8 cut(s) 231, 483, 523, 850, 1160, 1481, 1530, 1685
HpyF10VI GCNNNNNNNGC 9 cut(s) 625, 1208, 1217, 1463, 1691, 1985, 2102, 2167, 2313
HpySE526I ACGT 2 cut(s) 1471, 1492
HspAI GCGC 1 cut(s) 675
Ksp22I TGATCA 1 cut(s) 805
KspI CCGCGG 1 cut(s) 1334
LmnI GCTCC 3 cut(s) 1562, 1611, 2222
Lsp1109I GCAGC 8 cut(s) 1211, 1232, 1379, 1493, 1514, 1669, 1675, 1883
LweI GCATC 6 cut(s) 115, 235, 647, 1468, 2034, 2196
MaeI CTAG 4 cut(s) 1025, 1145, 1310, 1772
MaeII ACGT 2 cut(s) 1471, 1492
MaeIII GTNAC 4 cut(s) 620, 1640, 1745, 1846
MfeI CAATTG 2 cut(s) 375, 1350
MflI RGATCY 2 cut(s) 750, 890
MhlI GDGCHC 6 cut(s) 472, 1032, 1141, 2016, 2246, 2318
MlsI TGGCCA 1 cut(s) 1814
MluNI TGGCCA 1 cut(s) 1814
MlyI GAGTC 5 cut(s) 590, 1011, 1835, 1993, 2181
MmeI TCCRAC 1 cut(s) 1528
Mox20I TGGCCA 1 cut(s) 1814
MscI TGGCCA 1 cut(s) 1814
MseI TTAA 8 cut(s) 147, 206, 324, 1362, 1395, 1751, 2172, 2211
MslI CAYNNNNRTG 4 cut(s) 932, 1451, 1782, 2110
Msp20I TGGCCA 1 cut(s) 1814
MspA1I CMGCKG 3 cut(s) 1333, 1874, 2057
MspCI CTTAAG 1 cut(s) 1394
MspI CCGG 2 cut(s) 473, 664
MspR9I CCNGG 4 cut(s) 162, 1718, 1758, 1816
MunI CAATTG 2 cut(s) 375, 1350
Mva1269I GAATGC 2 cut(s) 852, 2225
MvaI CCWGG 4 cut(s) 162, 1718, 1758, 1816
MvnI CGCG 2 cut(s) 1333, 2018
MwoI GCNNNNNNNGC 9 cut(s) 625, 1208, 1217, 1463, 1691, 1985, 2102, 2167, 2313
NlaIV GGNNCC 6 cut(s) 399, 471, 668, 1564, 1673, 2032
NmeAIII GCCGAG 1 cut(s) 2169
NmuCI GTSAC 2 cut(s) 1745, 1846
NspI RCATGY 2 cut(s) 146, 814
OliI CACNNNNGTG 1 cut(s) 1451
PagI TCATGA 1 cut(s) 688
PceI AGGCCT 1 cut(s) 165
PciI ACATGT 2 cut(s) 142, 810
PctI GAATGC 2 cut(s) 852, 2225
PfeI GAWTC 3 cut(s) 699, 839, 1677
PflFI GACNNNGTC 1 cut(s) 1844
PflMI CCANNNNNTGG 1 cut(s) 1577
PleI GAGTC 5 cut(s) 590, 1011, 1835, 1993, 2181
PpsI GAGTC 5 cut(s) 590, 1011, 1835, 1993, 2181
PpuMI RGGWCCY 1 cut(s) 2031
PscI ACATGT 2 cut(s) 142, 810
Psp124BI GAGCTC 1 cut(s) 1032
Psp5II RGGWCCY 1 cut(s) 2031
Psp6I CCWGG 4 cut(s) 160, 1716, 1756, 1814
PspFI CCCAGC 1 cut(s) 1874
PspGI CCWGG 4 cut(s) 160, 1716, 1756, 1814
PspN4I GGNNCC 6 cut(s) 399, 471, 668, 1564, 1673, 2032
PspPI GGNCC 4 cut(s) 121, 1418, 1441, 2031
PspPPI RGGWCCY 1 cut(s) 2031
PsrI GAACNNNNNNTAC 2 cut(s) 1722, 1754
PstI CTGCAG 1 cut(s) 1687
PstNI CAGNNNCTG 1 cut(s) 1874
PsuI RGATCY 2 cut(s) 750, 890
PsyI GACNNNGTC 1 cut(s) 1844
PvuII CAGCTG 1 cut(s) 1874
RseI CAYNNNNRTG 4 cut(s) 932, 1451, 1782, 2110
SacI GAGCTC 1 cut(s) 1032
SacII CCGCGG 1 cut(s) 1334
SaqAI TTAA 8 cut(s) 147, 206, 324, 1362, 1395, 1751, 2172, 2211
Sau96I GGNCC 4 cut(s) 121, 1418, 1441, 2031
SchI GAGTC 5 cut(s) 590, 1011, 1835, 1993, 2181
ScrFI CCNGG 4 cut(s) 162, 1718, 1758, 1816
SduI GDGCHC 6 cut(s) 472, 1032, 1141, 2016, 2246, 2318
SfaNI GCATC 6 cut(s) 115, 235, 647, 1468, 2034, 2196
SfcI CTRYAG 2 cut(s) 438, 1683
Sfr303I CCGCGG 1 cut(s) 1334
SgrBI CCGCGG 1 cut(s) 1334
SinI GGWCC 2 cut(s) 1441, 2031
SmiMI CAYNNNNRTG 4 cut(s) 932, 1451, 1782, 2110
SmlI CTYRAG 6 cut(s) 598, 913, 1019, 1031, 1394, 1485
SmoI CTYRAG 6 cut(s) 598, 913, 1019, 1031, 1394, 1485
SseBI AGGCCT 1 cut(s) 165
SsiI CCGC 6 cut(s) 50, 395, 828, 1331, 1333, 2055
SspI AATATT 1 cut(s) 2340
SspMI CTAG 4 cut(s) 1025, 1145, 1310, 1772
SstI GAGCTC 1 cut(s) 1032
StuI AGGCCT 1 cut(s) 165
StyD4I CCNGG 4 cut(s) 160, 1716, 1756, 1814
StyI CCWWGG 2 cut(s) 1144, 1658
TaaI ACNGT 7 cut(s) 100, 487, 671, 1379, 1500, 1625, 1745
TaiI ACGT 2 cut(s) 1474, 1495
TaqI TCGA 6 cut(s) 102, 365, 461, 1633, 1893, 2312
TaqII GACCGA 1 cut(s) 1116
TatI WGTACW 5 cut(s) 139, 1050, 1171, 1596, 1738
TauI GCSGC 2 cut(s) 398, 831
TfiI GAWTC 3 cut(s) 699, 839, 1677
Tru1I TTAA 8 cut(s) 147, 206, 324, 1362, 1395, 1751, 2172, 2211
Tru9I TTAA 8 cut(s) 147, 206, 324, 1362, 1395, 1751, 2172, 2211
TscAI CASTG 4 cut(s) 490, 838, 1804, 2307
TseFI GTSAC 2 cut(s) 1745, 1846
TseI GCWGC 8 cut(s) 1199, 1220, 1367, 1481, 1527, 1663, 1682, 1871
Tsp45I GTSAC 2 cut(s) 1745, 1846
TspDTI ATGAA 5 cut(s) 42, 720, 916, 950, 2285
TspRI CASTG 4 cut(s) 490, 838, 1804, 2307
Tth111I GACNNNGTC 1 cut(s) 1844
Van91I CCANNNNNTGG 1 cut(s) 1577
Vha464I CTTAAG 1 cut(s) 1394
VpaK11BI GGWCC 2 cut(s) 1441, 2031
XagI CCTNNNNNAGG 2 cut(s) 1148, 1715
XapI RAATTY 1 cut(s) 1261
XceI RCATGY 2 cut(s) 146, 814
XcmI CCANNNNNNNNNTGG 2 cut(s) 1656, 1987
XmaJI CCTAGG 1 cut(s) 1144
XspI CTAG 4 cut(s) 1025, 1145, 1310, 1772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.