Prupe.2G073500_v2.0.a1

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000353
Physical Location & Seq
Reverse (-)
11108284 .. 11112751
4468 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G073500.2

Sequence Viewer

Length: 2244 bp
ATGGGAAGAGGGACAGCAGAAACTAAAGCAGCAGATGAGGCGGTGGCATTGGCAATAGACAAGGACAAAGGAAGTCAGCATGCTATCAAATGGGCTGTTGATCATCTTCTCACCAAGGGCCAACATCTCACCCTCCTCCATGTCAAACATACCCTTCCCAATCATGAGCTGTTTCTTCCCTTCCGTTCCTTTTGCAAGAAAAAGTTGATAAAGTGCCATGAAGTCGTAGTTGAGGCTGTCGATATACCGAAAGCCCTCATCAACTATGTTATCTCTAATTCAATTGAGATTTTGGTACTTGGTGCACCATCAAGACATAGTTTTTTCAGATCCTTCAAAGTAACAGATGTTCCCAGTTGTGTGATAAAAGGGCTACCGAATTTTTGCACTCTGTATGTCATTGGCAAAGGCAAGATCTCCTATGTGCAAACAGCTACCATTCCACCACCCAAAAAAGCTCGTAACCAAATTCATAAACAATCCAGCAAAGTTTCTGAATCAAATGGTACGCAATCCATGCATAAACAGCAACCAAGAGCATCAGGAAAGAGGACACATTCTGCACCCGATAGCCTGATGGTAGATGACACTGAAATCAAGTCACCCTTCACAAGAGGACGAGCTTCAATGAACAACTCATATGACCTTTCGCCAGAGAGTACCGATATATCGTTTGTGAGCAGTGGAAGGCCAAGTATTGATCGCATGTTCCCTTCGTTAACAACCCCTCAAAAATCGATTAGTCCAGAATTTGACAACCGAAGCTCTACGACATCTTACTCAAGACACCAGTTTATTGACAAGAGCTCTTCCCCACAAGACTTCTCATCATCCTCAATGGAAAGTGGAAAATCATGGTCATCATCACACAACATGGATGAAGTGGAAGCCGAGATGTGGAGGCTCAAGCTAGAGCTCAAGCAAACAATGGACGTGTATAAAATGGCCTGCAGGGAGGCGGTCACGTTAAATCATGAGGCACAGGAACTTGACCAATGGAAATCGGAGGGGGAACATAGATTAAATGAGGCACACATAACAGAGGAAGCTGCATTTGCACTAATAAAGAAGGAGAGAGAGAAATGTAAGGCAGCCATGGAGGCGGCAGAAGCAGCTCAAAGGATTGCTGAATTGGAAGCACATAAAAGGAGGAACGCAGAAATGAAAGCCCTTAAAGAAGCAGAAGAGAGGAACCAGGCAACAGAAGCAAGGGCATATAATCTAAGGTACAGGAAATACACAATTGAGGAGATTGAAGCAGGAACAAATAAATTTTCACACACTGACAAGATCGGAGAAGGAGGCTATGGTCCAGTATACAGGGGTGAACTGGATCACACACAAGTGGCAGTCAAAATTCTACGTCCAGGTGCAGCGCAAGGACATTCGCAGTTCCAACAAGAGGTTGAAGTATTGAGCTGCATACGACATCCGAACATGGTTCTCCTTCTTGGAGCCTGCCCAGAGTATGGCTGTCTGGTCTATGAGTACATGGCTAATGGGAGCTTAGAAGACCGTCTCTTCCAGCGAGGTAACACCCCAGTTATTCCTTGGCAGCTAAGGTTCCGAATCTCTGCAGAAATTGCCACTGGGCTTTTGTTCCTTCACCAGTCCAAGCCAGAGCCACTTGTACACCGTGACCTAAAACCCGGCAACATTTTGCTAGACCATAACTATGTTAGCAAGATTAGTGATGTAGGTCTGGCCAGGCTTGTTCCTCCATCAGTAGCCGACTCTGTCACTCAATATCGAATGACGTCAACAGCTGGAACATTCTGTTATATCGACCCAGAGTATCAGCAAACCGGCATGCTTGGAACAAAATCTGATATCTACTCGCTTGGGGTCATGCTTCTACAAATAATAACTGCCAAACCGCCGATGGGTTTGGCTCATCATGTTGAGCTGGCTATTGAGCTAGGGACCTTTGCTGAGATGCTTGACCCTGCTGTTCCTGACTGGCCAATTGAGGAAGCCTTGAGCTTTGCCAAGTTATCTTTACAGTGTACTGAAATGAGGCGAAAAGACAGACCTGATCTTGCCAAGATTGTGCTACCTGAGCTTAACAGATTGAGAGCACTCGCTGAAGATAGCATGCATTACAACATGCTTGGTGGTTGTGGTGGTGGAGTATACTTACCAAGACAAGGCTCAATTTCCAGAAAACAGGATGTGCTGAGTGACATGCATCTACCAAGATCTGGATATAATAGTTCAAGGAGCCATTCAAGCACATCATCTTAG

Protein Analysis

748

Amino Acids

83.45

Weight (kDa)

8.11

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000353)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G07020 AT5G35380
fragaria_vesca FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_1g27800 FvH4_6g28460 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29380 FvH4_6g29580 FvH4_6g29580 FvH4_6g29581
malus_domestica MD02G1258200.v1.1 MD09G1226500.v1.1 MD13G1232900.v1.1 MD13G1233000.v1.1 MD17G1212900.v1.1 MD17G1215300.v1.1 MD17G1215400.v1.1 MD17G1224800.v1.1
prunus_persica Prupe.1G064300_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.2G073500_v2.0.a1 Prupe.3G088300_v2.0.a1 Prupe.3G091100_v2.0.a1 Prupe.3G100600_v2.0.a1
pyrus_communis pycom02g21950 pycom09g14550 pycom13g20580 pycom17g21790 pycom17g21970 pycom17g22850
rosa_chinensis RchiOBHm_Chr1g0332091 RchiOBHm_Chr2g0132681 RchiOBHm_Chr2g0134781 RchiOBHm_Chr2g0135161 RchiOBHm_Chr2g0135181 RchiOBHm_Chr2g0135191 RchiOBHm_Chr2g0135201 RchiOBHm_Chr4g0397641 RchiOBHm_Chr4g0397651
rosa_laevigata RLG00000009421 RLG00000019421 RLG00000019446 RLG00000019447 RLG00000029693
rosa_multiflora Rmu_co8345215.1_g000001 Rmu_sc0000100.1_g000004 Rmu_sc0000718.1_g000015 Rmu_sc0002729.1_g000006 Rmu_sc0003358.1_g000008 Rmu_sc0004216.1_g000001 Rmu_sc0013462.1_g000001 Rmu_sc0013462.1_g000002 Rmu_sc0016837.1_g000002 Rmu_sc0021270.1_g000001 Rmu_sc0021634.1_g000001 Rmu_sc0024706.1_g000001
rosa_roxburghii Rroxscaffold_2G00109410 Rroxscaffold_2G00109420 Rroxscaffold_2G00109760 Rroxscaffold_4G00318390 Rroxscaffold_5G00342450 Rroxscaffold_5G00342460
rosa_rugosa Rorug01G0098200 Rorug01G0098300 Rorug02G0306000 Rorug02G0320000 Rorug02G0323800 Rorug02G0323800 Rorug03G0342000 Rorug03G0342100
rosa_samantha Rh1AG006500 Rh1AG122200 Rh1BG093600 Rh1CG116800 Rh2AG359000 Rh2AG371300 Rh2AG371400 Rh2AG373600 Rh2BG365600 Rh2BG377600 Rh2BG380100 Rh2BG380200 Rh2BG380300 Rh2CG342200 Rh2CG356000 Rh2CG359300 Rh2CG359600 Rh2DG382100 Rh2DG394600 Rh2DG396600 Rh2DG396700 Rh2DG396800 Rh2DG396900 Rh4BG077700 Rh4CG085500 Rh4DG072600
rosa_wichuraiana Rw1G009960 Rw2G029220 Rw2G030290 Rw2G030560 Rw2G030570 Rw4G006520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1760
AccB7I CCANNNNNTGG 2 cut(s) 1469, 2201
AccI GTMKAC 2 cut(s) 1317, 2133
AciI CCGC 4 cut(s) 41, 959, 1103, 1877
AclWI GGATC 2 cut(s) 324, 1341
AcoI YGGCCR 2 cut(s) 1704, 1961
AcsI RAATTY 5 cut(s) 379, 468, 749, 1271, 1356
AcuI CTGAAG 1 cut(s) 2106
AcyI GRCGYC 1 cut(s) 1757
AfaI GTAC 7 cut(s) 297, 508, 661, 1229, 1490, 1632, 2008
AfiI CCNNNNNNNGG 6 cut(s) 897, 1402, 1469, 1883, 2147, 2201
AflIII ACRYGT 1 cut(s) 933
AgsI TTSAA 7 cut(s) 282, 337, 627, 1256, 1409, 2217, 2229
AjiI CACGTC 1 cut(s) 934
AjnI CCWGG 3 cut(s) 1194, 1366, 1706
AleI CACNNNNGTG 1 cut(s) 1343
Alw21I GWGCWC 4 cut(s) 307, 809, 918, 2080
Alw26I GTCTC 1 cut(s) 1523
Alw44I GTGCAC 1 cut(s) 303
AlwI GGATC 2 cut(s) 324, 1341
AoxI GGCC 5 cut(s) 118, 689, 945, 1704, 1961
ApaLI GTGCAC 1 cut(s) 303
ApeKI GCWGC 7 cut(s) 29, 1049, 1091, 1112, 1373, 1419, 1555
ApoI RAATTY 5 cut(s) 379, 468, 749, 1271, 1356
AspLEI GCGC 1 cut(s) 1378
AspS9I GGNCC 3 cut(s) 118, 1310, 1923
AsuC2I CCSGG 1 cut(s) 1650
AsuHPI GGTGA 5 cut(s) 103, 121, 594, 1337, 1598
AvaII GGWCC 2 cut(s) 1310, 1923
BaeGI GKGCMC 1 cut(s) 307
BalI TGGCCA 2 cut(s) 1706, 1963
BanII GRGCYC 2 cut(s) 809, 918
BbsI GAAGAC 1 cut(s) 1518
Bbv12I GWGCWC 4 cut(s) 307, 809, 918, 2080
BbvI GCAGC 7 cut(s) 41, 1036, 1103, 1124, 1385, 1406, 1567
BccI CCATC 4 cut(s) 316, 571, 1729, 1876
BciT130I CCWGG 3 cut(s) 1196, 1368, 1708
BclI TGATCA 1 cut(s) 100
BcnI CCSGG 1 cut(s) 1650
BcoDI GTCTC 1 cut(s) 1523
BfaI CTAG 3 cut(s) 911, 1664, 1919
BfmI CTRYAG 2 cut(s) 949, 1575
BglI GCCNNNNNGGC 1 cut(s) 1100
BglII AGATCT 2 cut(s) 414, 2198
BisI GCNGC 8 cut(s) 30, 1050, 1092, 1104, 1113, 1374, 1420, 1556
BlsI GCNGC 8 cut(s) 31, 1051, 1093, 1105, 1114, 1375, 1421, 1557
Bme1390I CCNGG 4 cut(s) 1196, 1368, 1650, 1708
Bme18I GGWCC 2 cut(s) 1310, 1923
BmgBI CACGTC 1 cut(s) 934
BmgT120I GGNCC 3 cut(s) 118, 1310, 1923
BmiI GGNNCC 5 cut(s) 1193, 1456, 1565, 1924, 2222
BmrFI CCNGG 4 cut(s) 1196, 1368, 1650, 1708
BmrI ACTGGG 3 cut(s) 348, 1535, 1599
BmsI GCATC 3 cut(s) 548, 1926, 2197
BmuI ACTGGG 3 cut(s) 348, 1535, 1599
BpiI GAAGAC 1 cut(s) 1518
Bpu10I CCTNAGC 2 cut(s) 1559, 2058
BpuEI CTTGAG 4 cut(s) 766, 890, 902, 1999
BpuMI CCSGG 1 cut(s) 1650
Bsa29I ATCGAT 1 cut(s) 737
BsaHI GRCGYC 1 cut(s) 1757
BsaJI CCNNGG 3 cut(s) 114, 1095, 1550
Bsc4I CCNNNNNNNGG 6 cut(s) 897, 1402, 1469, 1883, 2147, 2201
Bse118I RCCGGY 1 cut(s) 1805
Bse1I ACTGG 8 cut(s) 354, 790, 1313, 1335, 1541, 1594, 1609, 1964
BseBI CCWGG 3 cut(s) 1196, 1368, 1708
BseCI ATCGAT 1 cut(s) 737
BseDI CCNNGG 3 cut(s) 114, 1095, 1550
BseGI GGATG 4 cut(s) 830, 883, 1429, 2176
BseLI CCNNNNNNNGG 6 cut(s) 897, 1402, 1469, 1883, 2147, 2201
BseMII CTCAG 3 cut(s) 1923, 2049, 2168
BseNI ACTGG 8 cut(s) 354, 790, 1313, 1335, 1541, 1594, 1609, 1964
BseRI GAGGAG 2 cut(s) 125, 1262
BseSI GKGCMC 1 cut(s) 307
BseXI GCAGC 7 cut(s) 41, 1036, 1103, 1124, 1385, 1406, 1567
BsgI GTGCAG 2 cut(s) 546, 1392
BshFI GGCC 5 cut(s) 120, 691, 947, 1706, 1963
BshVI ATCGAT 1 cut(s) 737
BsiHKAI GWGCWC 4 cut(s) 307, 809, 918, 2080
BsiSI CCGG 2 cut(s) 1650, 1806
BslFI GGGAC 2 cut(s) 25, 1936
BslI CCNNNNNNNGG 6 cut(s) 897, 1402, 1469, 1883, 2147, 2201
BsmAI GTCTC 1 cut(s) 1523
BsmBI CGTCTC 1 cut(s) 1523
BsmFI GGGAC 2 cut(s) 25, 1936
BsnI GGCC 5 cut(s) 120, 691, 947, 1706, 1963
Bsp1286I GDGCHC 4 cut(s) 307, 809, 918, 2080
Bsp1407I TGTACA 1 cut(s) 1630
Bsp143I GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
Bsp19I CCATGG 1 cut(s) 1095
BspACI CCGC 4 cut(s) 41, 959, 1103, 1877
BspANI GGCC 5 cut(s) 120, 691, 947, 1706, 1963
BspCNI CTCAG 3 cut(s) 1924, 2050, 2169
BspDI ATCGAT 1 cut(s) 737
BspHI TCATGA 2 cut(s) 163, 973
BspLI GGNNCC 5 cut(s) 1193, 1456, 1565, 1924, 2222
BspMAI CTGCAG 2 cut(s) 953, 1579
BspPI GGATC 2 cut(s) 324, 1341
BspQI GCTCTTC 1 cut(s) 814
BsrFI RCCGGY 1 cut(s) 1805
BsrGI TGTACA 1 cut(s) 1630
BsrI ACTGG 8 cut(s) 354, 790, 1313, 1335, 1541, 1594, 1609, 1964
BssAI RCCGGY 1 cut(s) 1805
BssECI CCNNGG 3 cut(s) 114, 1095, 1550
BssMI GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
BssNAI GTATAC 2 cut(s) 1318, 2134
BssNI GRCGYC 1 cut(s) 1757
BssT1I CCWWGG 3 cut(s) 114, 1095, 1550
Bst1107I GTATAC 2 cut(s) 1318, 2134
Bst2UI CCWGG 3 cut(s) 1196, 1368, 1708
Bst4CI ACNGT 3 cut(s) 1517, 1637, 2004
Bst6I CTCTTC 3 cut(s) 814, 1179, 1526
BstACI GRCGYC 1 cut(s) 1757
BstAPI GCANNNNNTGC 2 cut(s) 517, 1583
BstAUI TGTACA 1 cut(s) 1630
BstC8I GCNNGC 6 cut(s) 81, 949, 1459, 1811, 1908, 2096
BstDEI CTNAG 7 cut(s) 1223, 1507, 1559, 1932, 2058, 2177, 2241
BstDSI CCRYGG 1 cut(s) 1095
BstF5I GGATG 4 cut(s) 830, 883, 1429, 2176
BstHHI GCGC 1 cut(s) 1378
BstKTI GATC 8 cut(s) 103, 332, 417, 703, 1293, 1336, 2038, 2201
BstMAI GTCTC 1 cut(s) 1523
BstMBI GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
BstNI CCWGG 3 cut(s) 1196, 1368, 1708
BstNSI RCATGY 6 cut(s) 83, 709, 1813, 2098, 2110, 2188
BstSCI CCNGG 4 cut(s) 1194, 1366, 1648, 1706
BstSFI CTRYAG 2 cut(s) 949, 1575
BstSLI GKGCMC 1 cut(s) 307
BstV1I GCAGC 7 cut(s) 41, 1036, 1103, 1124, 1385, 1406, 1567
BstV2I GAAGAC 1 cut(s) 1518
BstX2I RGATCY 3 cut(s) 329, 414, 2198
BstYI RGATCY 3 cut(s) 329, 414, 2198
BstZ17I GTATAC 2 cut(s) 1318, 2134
Bsu15I ATCGAT 1 cut(s) 737
BsuRI GGCC 5 cut(s) 120, 691, 947, 1706, 1963
BsuTUI ATCGAT 1 cut(s) 737
BtgI CCRYGG 1 cut(s) 1095
BtrI CACGTC 1 cut(s) 934
BtsCI GGATG 4 cut(s) 830, 883, 1429, 2176
BtsI GCAGTG 1 cut(s) 688
BtsIMutI CAGTG 5 cut(s) 588, 688, 1281, 1587, 2009
Cac8I GCNNGC 6 cut(s) 81, 949, 1459, 1811, 1908, 2096
CciI TCATGA 2 cut(s) 163, 973
CfoI GCGC 1 cut(s) 1378
Cfr10I RCCGGY 1 cut(s) 1805
Cfr13I GGNCC 3 cut(s) 118, 1310, 1923
ClaI ATCGAT 1 cut(s) 737
Csp6I GTAC 7 cut(s) 296, 507, 660, 1228, 1489, 1631, 2007
CviQI GTAC 7 cut(s) 296, 507, 660, 1228, 1489, 1631, 2007
DdeI CTNAG 7 cut(s) 1223, 1507, 1559, 1932, 2058, 2177, 2241
DpnI GATC 8 cut(s) 102, 331, 416, 702, 1292, 1335, 2037, 2200
DpnII GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
EaeI YGGCCR 2 cut(s) 1704, 1961
Eam1104I CTCTTC 3 cut(s) 814, 1179, 1526
EarI CTCTTC 3 cut(s) 814, 1179, 1526
Ecl136II GAGCTC 2 cut(s) 807, 916
Eco130I CCWWGG 3 cut(s) 114, 1095, 1550
Eco24I GRGCYC 2 cut(s) 809, 918
Eco32I GATATC 1 cut(s) 1831
Eco47I GGWCC 2 cut(s) 1310, 1923
Eco53kI GAGCTC 2 cut(s) 807, 916
Eco57I CTGAAG 1 cut(s) 2106
EcoICRI GAGCTC 2 cut(s) 807, 916
EcoO109I RGGNCCY 1 cut(s) 1923
EcoRII CCWGG 3 cut(s) 1194, 1366, 1706
EcoRV GATATC 1 cut(s) 1831
EcoT14I CCWWGG 3 cut(s) 114, 1095, 1550
EcoT22I ATGCAT 3 cut(s) 522, 2100, 2190
EcoT38I GRGCYC 2 cut(s) 809, 918
ErhI CCWWGG 3 cut(s) 114, 1095, 1550
Esp3I CGTCTC 1 cut(s) 1523
FalI AAGNNNNNCTT 2 cut(s) 590, 622
FaqI GGGAC 2 cut(s) 25, 1936
FauNDI CATATG 1 cut(s) 640
FbaI TGATCA 1 cut(s) 100
FblI GTMKAC 2 cut(s) 1317, 2133
Fnu4HI GCNGC 8 cut(s) 30, 1050, 1092, 1104, 1113, 1374, 1420, 1556
FokI GGATG 4 cut(s) 817, 890, 1416, 2183
FriOI GRGCYC 2 cut(s) 809, 918
Fsp4HI GCNGC 8 cut(s) 30, 1050, 1092, 1104, 1113, 1374, 1420, 1556
FspBI CTAG 3 cut(s) 911, 1664, 1919
GlaI GCGC 1 cut(s) 1377
GluI GCNGC 8 cut(s) 30, 1050, 1092, 1104, 1113, 1374, 1420, 1556
HaeIII GGCC 5 cut(s) 120, 691, 947, 1706, 1963
HapII CCGG 2 cut(s) 1650, 1806
HhaI GCGC 1 cut(s) 1378
Hin1I GRCGYC 1 cut(s) 1757
Hin6I GCGC 1 cut(s) 1376
HinP1I GCGC 1 cut(s) 1376
HincII GTYRAC 2 cut(s) 720, 1761
HindII GTYRAC 2 cut(s) 720, 1761
HinfI GANTC 3 cut(s) 497, 1569, 1733
HpaI GTTAAC 1 cut(s) 720
HpaII CCGG 2 cut(s) 1650, 1806
HphI GGTGA 5 cut(s) 103, 121, 594, 1337, 1598
Hpy166II GTNNAC 8 cut(s) 305, 720, 1318, 1328, 1633, 1761, 2007, 2134
Hpy188I TCNGA 7 cut(s) 329, 496, 1006, 1295, 1434, 1568, 1828
Hpy188III TCNNGA 9 cut(s) 164, 312, 543, 746, 783, 974, 1955, 2160, 2202
Hpy8I GTNNAC 8 cut(s) 305, 720, 1318, 1328, 1633, 1761, 2007, 2134
HpyCH4III ACNGT 3 cut(s) 1517, 1637, 2004
HpyCH4IV ACGT 4 cut(s) 933, 965, 1363, 1757
HpyF3I CTNAG 7 cut(s) 1223, 1507, 1559, 1932, 2058, 2177, 2241
HpySE526I ACGT 4 cut(s) 933, 965, 1363, 1757
Hsp92I GRCGYC 1 cut(s) 1757
HspAI GCGC 1 cut(s) 1376
Ksp22I TGATCA 1 cut(s) 100
KspAI GTTAAC 1 cut(s) 720
Kzo9I GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
LguI GCTCTTC 1 cut(s) 814
LmnI GCTCC 3 cut(s) 1454, 1503, 2220
Lsp1109I GCAGC 7 cut(s) 41, 1036, 1103, 1124, 1385, 1406, 1567
LweI GCATC 3 cut(s) 548, 1926, 2197
MaeI CTAG 3 cut(s) 911, 1664, 1919
MaeII ACGT 4 cut(s) 933, 965, 1363, 1757
MaeIII GTNAC 8 cut(s) 340, 461, 600, 961, 1532, 1637, 1738, 2180
MalI GATC 8 cut(s) 102, 331, 416, 702, 1292, 1335, 2037, 2200
MboI GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
MboII GAAGA 8 cut(s) 18, 98, 167, 801, 1196, 1513, 1523, 2099
MfeI CAATTG 3 cut(s) 282, 1242, 1965
MflI RGATCY 3 cut(s) 329, 414, 2198
MhlI GDGCHC 4 cut(s) 307, 809, 918, 2080
MlsI TGGCCA 2 cut(s) 1706, 1963
MluNI TGGCCA 2 cut(s) 1706, 1963
MlyI GAGTC 1 cut(s) 1727
MmeI TCCRAC 1 cut(s) 1420
Mox20I TGGCCA 2 cut(s) 1706, 1963
Mph1103I ATGCAT 3 cut(s) 522, 2100, 2190
MscI TGGCCA 2 cut(s) 1706, 1963
MseI TTAA 5 cut(s) 719, 968, 1022, 1173, 2064
MslI CAYNNNNRTG 2 cut(s) 1343, 1674
Msp20I TGGCCA 2 cut(s) 1706, 1963
MspA1I CMGCKG 1 cut(s) 1766
MspI CCGG 2 cut(s) 1650, 1806
MspR9I CCNGG 4 cut(s) 1196, 1368, 1650, 1708
MunI CAATTG 3 cut(s) 282, 1242, 1965
MvaI CCWGG 3 cut(s) 1196, 1368, 1708
NciI CCSGG 1 cut(s) 1650
NcoI CCATGG 1 cut(s) 1095
NdeI CATATG 1 cut(s) 640
NdeII GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
NlaIV GGNNCC 5 cut(s) 1193, 1456, 1565, 1924, 2222
NmeAIII GCCGAG 1 cut(s) 916
NmuCI GTSAC 5 cut(s) 600, 961, 1637, 1738, 2180
NsiI ATGCAT 3 cut(s) 522, 2100, 2190
NspI RCATGY 6 cut(s) 83, 709, 1813, 2098, 2110, 2188
OliI CACNNNNGTG 1 cut(s) 1343
PaeI GCATGC 3 cut(s) 83, 1813, 2098
PagI TCATGA 2 cut(s) 163, 973
PciSI GCTCTTC 1 cut(s) 814
PfeI GAWTC 2 cut(s) 497, 1569
PflFI GACNNNGTC 1 cut(s) 1736
PflMI CCANNNNNTGG 2 cut(s) 1469, 2201
PkrI GCNGC 8 cut(s) 31, 1051, 1093, 1105, 1114, 1375, 1421, 1557
PleI GAGTC 1 cut(s) 1727
PpsI GAGTC 1 cut(s) 1727
PpuMI RGGWCCY 1 cut(s) 1923
Psp124BI GAGCTC 2 cut(s) 809, 918
Psp5II RGGWCCY 1 cut(s) 1923
Psp6I CCWGG 3 cut(s) 1194, 1366, 1706
PspGI CCWGG 3 cut(s) 1194, 1366, 1706
PspN4I GGNNCC 5 cut(s) 1193, 1456, 1565, 1924, 2222
PspPI GGNCC 3 cut(s) 118, 1310, 1923
PspPPI RGGWCCY 1 cut(s) 1923
PsrI GAACNNNNNNTAC 2 cut(s) 333, 365
PstI CTGCAG 2 cut(s) 953, 1579
PsuI RGATCY 3 cut(s) 329, 414, 2198
PsyI GACNNNGTC 1 cut(s) 1736
PvuII CAGCTG 1 cut(s) 1766
RsaI GTAC 7 cut(s) 297, 508, 661, 1229, 1490, 1632, 2008
RsaNI GTAC 7 cut(s) 296, 507, 660, 1228, 1489, 1631, 2007
RseI CAYNNNNRTG 2 cut(s) 1343, 1674
SacI GAGCTC 2 cut(s) 809, 918
SapI GCTCTTC 1 cut(s) 814
SaqAI TTAA 5 cut(s) 719, 968, 1022, 1173, 2064
SatI GCNGC 8 cut(s) 30, 1050, 1092, 1104, 1113, 1374, 1420, 1556
Sau3AI GATC 8 cut(s) 100, 329, 414, 700, 1290, 1333, 2035, 2198
Sau96I GGNCC 3 cut(s) 118, 1310, 1923
SbfI CCTGCAGG 1 cut(s) 953
SchI GAGTC 1 cut(s) 1727
ScrFI CCNGG 4 cut(s) 1196, 1368, 1650, 1708
SdaI CCTGCAGG 1 cut(s) 953
SduI GDGCHC 4 cut(s) 307, 809, 918, 2080
SfaNI GCATC 3 cut(s) 548, 1926, 2197
SfcI CTRYAG 2 cut(s) 949, 1575
SinI GGWCC 2 cut(s) 1310, 1923
SmiMI CAYNNNNRTG 2 cut(s) 1343, 1674
SmlI CTYRAG 4 cut(s) 781, 905, 917, 1978
SmoI CTYRAG 4 cut(s) 781, 905, 917, 1978
SphI GCATGC 3 cut(s) 83, 1813, 2098
Sse8387I CCTGCAGG 1 cut(s) 953
SsiI CCGC 4 cut(s) 41, 959, 1103, 1877
SspMI CTAG 3 cut(s) 911, 1664, 1919
SstI GAGCTC 2 cut(s) 809, 918
StyD4I CCNGG 4 cut(s) 1194, 1366, 1648, 1706
StyI CCWWGG 3 cut(s) 114, 1095, 1550
TaaI ACNGT 3 cut(s) 1517, 1637, 2004
TaiI ACGT 4 cut(s) 936, 968, 1366, 1760
TaqI TCGA 4 cut(s) 240, 737, 1750, 1785
TatI WGTACW 3 cut(s) 1488, 1630, 2006
TauI GCSGC 1 cut(s) 1106
TfiI GAWTC 2 cut(s) 497, 1569
Tru1I TTAA 5 cut(s) 719, 968, 1022, 1173, 2064
Tru9I TTAA 5 cut(s) 719, 968, 1022, 1173, 2064
TscAI CASTG 5 cut(s) 595, 688, 1288, 1594, 2009
TseFI GTSAC 5 cut(s) 600, 961, 1637, 1738, 2180
TseI GCWGC 7 cut(s) 29, 1049, 1091, 1112, 1373, 1419, 1555
Tsp45I GTSAC 5 cut(s) 600, 961, 1637, 1738, 2180
TspDTI ATGAA 5 cut(s) 234, 461, 644, 894, 1178
TspGWI ACGGA 1 cut(s) 173
TspRI CASTG 5 cut(s) 595, 688, 1288, 1594, 2009
Tth111I GACNNNGTC 1 cut(s) 1736
Van91I CCANNNNNTGG 2 cut(s) 1469, 2201
VneI GTGCAC 1 cut(s) 303
VpaK11BI GGWCC 2 cut(s) 1310, 1923
XapI RAATTY 5 cut(s) 379, 468, 749, 1271, 1356
XceI RCATGY 6 cut(s) 83, 709, 1813, 2098, 2110, 2188
XcmI CCANNNNNNNNNTGG 2 cut(s) 1548, 1879
XmiI GTMKAC 2 cut(s) 1317, 2133
XspI CTAG 3 cut(s) 911, 1664, 1919
ZraI GACGTC 1 cut(s) 1758
Zsp2I ATGCAT 3 cut(s) 522, 2100, 2190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.