pycom01g00660

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
669915 .. 675419
5505 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g00660.28

Sequence Viewer

Length: 3906 bp
ATGGGGTCATATGGCCAATTTAGTGTCGACCAACATGTAACGCCCCGAAAATTTTATACGGAATCTAACTACGTAACTGTACTAGCAATTCTCTCTTTGACGATTTTTCCACAAATATTTAATCTCGTTTATTTTATGGTTGCATCTAACTTCTCGTTAGACTACCTACGTACCATTTGGAGAGATCAAGCCAATCGTAGTTCACAATCCATTTTACACATTTTAGAAAACAACACTATTGGACCAAGTTTAGGCTCCCTCATGTTTTGTACTTTAAAAGCGTATAAAGTTTGCAGAAAATGGGGCTTTAAATTGGAATTGGTAGCTCGTGACCTAAGTTTAAATAAGGTTTTGATCAACCAAAACTCAATAGAACTGAGTGAAAACAATTGGCTTACGATCATGAACATATTTACTTTCAACACACTAAAAAATTTCTCCAAAGGAGCACATAAAGACCTAGAAATTAAGATAATTTTCTACAACTTACGTAACAACCCACTCCCAATTCATATAAGAAATCCCAAAATACTTCCAGGTAGTCCAGAAGTCACGTACACAACATCCAAAACTAACAAGTCGATCTACAAACCCAATTCGAATTACCCAACTCTAATTCATGTTCAGACTGGTGACGACCCGTCACTAATTTTTCAGGCAAGGATTTTGACTTTCATTGATTACGAACGCGTGGGTACAAGAGGATTTGAATTTGGAGCAAAAACAGGGATATTATGGAATTCGAAATGTAAGGGTATTTTAGTAAGTTCACAAATGGAGATATTTCTCCACTTTGGACACCACATGACTGACATGTGGCAACCCATTTCTGGTGCCATTTTTCTTTCCTCTCCCGTGATCTCTCCCTCGAGAACTCTCTCGTCTCTCGTTTCTCATCTCTGTCAACTCTTCCTATCTACCAGTTCAACCAAAACGCCACCATCCCTTGCCTTCTCTAGCGAGTTTCGCCACAGAACCACCATAACTTTCTCATCTCCAACTCTCTCTGCACCCATCGTGCATATGGTTAATTGTGTTAGCATGACTCCTCAGGATACTGGGTTCGAAAGGAAATGCTTCGGGACTTTCTCTTTCTCAATTCTCTGTGCACAACATTGTGCAACCATGGTGAGTCTTGAGACCCTCAAATTCTTCACGTTTCGAAGCCTTTTTAGTGAAGCAATCTGGGAAACAAAACCCGTGGCCCTTTGGCCATTTTCAGACCAAATTTTCGACCAACTCCGATATTCGTTGGGCCTCCTAAGGCTAAGAAAGTTGGGAAGAAAATTCCAAAAGTCTGGAAAGTTTGGCCGTGACCATCAGACCACTTTTAGGCCGTTCCCTTGTTCAACTCCGGCCACGATTGGACCCCGAACTAGTATAAACTTTTTCCCCACATTCCTAGCTTCTTCAGCCTTGGAAGTTAGGAAGAAAACCAACAAAATTATGACCTTCGTGAGGAAGGCGAATATTGATGTACTCGCTGCGTGTGTAGCGCGTGGCTGCCAATGCAGCCACTTTGTGGCGGTTTCTCGATGTGTCGGACTCGAATCCGCTCTCCGTTTTCTAAAATTTGATTGTTTTAAAATAGTTTCTTTATTAGCCGTACTTTGTACGAAATCGCGTTTATATATTAGTACGTTACGTATTTACCTAAATGAATTCGTTTCTAGGCGAAATGCATCAATCTGTGAGTGGGCATTTTGTTTATATATATATATATATATATATATATATGTCTTACGGTTTCCAAATATATTTAAATATTGCATTATGATGAGATTTGTGATTATGTCAAATGATCCTACGGAGGCGCAGGTAAGTTCAGGTGAGTTATTATCATTGCTGCACTCCGGTGTTAGTGCTCCCGCCCTGAGCCAGGGCATAGCCTTCATGTGTATGTTCACCTCCCACATCGCACACTCGCCTTGGATCCAAGTAGGTGCTAGTGACCCGCGATTTATCGCTAGCCATCACGTGATCGTAGCACTAGAGCGTACATATTTACACCCAGCTTGTTGTACAGGTCACAATAGAGGTCCAGTCTTACTGGTCACATTAGATATTGTGGCATGGCATGCTTTTGTTTTCACTGCACTCATGCATTCATTTTCGTACCTACGTAGTATTGTTTTACGGAGAGGGGTTAGTACTTTCAAAAAAGATAAAATGTGTTTTCTAAAGCTTTATTTTCCCCCACTCACCCTTCTGTTTTTCGCCCCTCCAGGTTTTTGTACCTTATCTTACCTTACTGTACTTTATTTATGCTCTGTAATCAAGTGTGAAATGAGTTCCTTCCCGCTCACCAGCGCACTCTTATATTTAGGCACTTTTAGGTTTAAATTTATTCACATTTTCCACATCACTACACTTTATGTCCTAGTGGACATACGAGGTCAGGGTGTGTCAAAGAACTCTAAATATATCATGGCAGTTTCAATTCAACTTAAGGAAATTAAATTCGAAAATCAAGATAATCAAGGAACAAGGAATTTACCCTTCAAATCTCTGAATCCTTCATTCACAATCAGGAAGAGAAATTTTCTTCTAAAAGCTATGGAAGAGCTACCTCCTCCCTATTTTTTTTGTCGCCCCTTTCCCCTTTTTCTTCCTTCTCATTTGTCTCCTCCCTTTTTTTTCCCCCCAGCCACAACCACACACGTGGCTTATCTCCACCAAGCCATTCCTCCAGCCAAATCTGGAGCTTTCCAGATTAGTGGTCAAATGACCATTTTACCCTTGCCTTTGATCGTTTATATCTCTTTCATTATAACTCTGTTTCTCAAATATGTCAAGAAATATAATAAAATATATGAGGATAAAATATGTTCTCGTATAATTACATTAAACCAACTCGGGGCATTTTTGTCATTTTCACTTATTGATAAATTTTACAATCGATTTATTTTCGATTTTCTCCACATTCATAATTATGAATATCTAATTCGTATATTTAAAATTTCGGGGTATTACATAGCACATCACGAACTTGTAACTTGTGTTATTGGGGTTGGGATGTGTCACACAACATCCATAACCCTTTTTTATTTGAGACATACCCTACAAACACACACTGTAACGCTCGAGGTTCCAGCTTACTTCTACGTTGTTTATGGAGATGAACAAAGGTCACACATCCAAACACATGAGGTGGAAGGTTGGGAATTGAAGGAACATCAACATATAAGGAGAAAGCCTGGAGCGTTTGGGGAAAAGCTCTCAGCTCAGCTGCATATCTCGTTAATTGTGTTCCATCCCGATCAGTCGATTTTCAAACAGTTCTCCAAGCTCTCTCCTCATATGTTGATGCTCTTGCATAGATACTCTTGCAGTGCCTCTTTCAAACACCGTTCTAGGCTCTCTCCTCATATGTTGATGCTCTTGCATATCCATGAGGAGGAGCATATCCATAAACTAGTTCAAAAGGAGCAGCCACAAAGTCCATTTCTTAGGTTGAGAACTCACAAAACATCGAAGATAAATTTCAACCCACCTGTTGACCACTTTTGTTGGGCCATCACTTTGGGGGTGAACCCCTTCCAAAAAGCATCACTTGGAAACACAGGGTCTCTGACACTAATAATTATAACTGGCATGCCCTGGAGTTTGAATATGTTAGCAACAAAAGAGTATGCCACTGTAGTTGTTGTATATGGGTGTGCCAGTGCAATAAAATGGGCATACTTACTCAACCTGTCAACCACAACCATGATTACAGATTTACCCTTGCTGAGAGGAAGGCCAACAATGAAATCCATGCTAATGTCAGTCCACACCTTCTCTAGAATGGGCAAAGGTTGCAATAAACCATGTGGGGAAATGGTTTCATACTTATTTTATGAGACCAGTAGAAACCCCTCTTTAGCCGTTGATAGAATTTCAATCTACAATAGGACTAAAGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1302

Amino Acids

148.84

Weight (kDa)

9.59

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2771, 3587
Acc36I ACCTGC 1 cut(s) 1807
AccB1I GGYRCC 1 cut(s) 833
AccB7I CCANNNNNTGG 1 cut(s) 1522
AccBSI CCGCTC 2 cut(s) 1556, 2302
AccI GTMKAC 1 cut(s) 27
AccII CGCG 4 cut(s) 690, 1498, 1624, 1957
AciI CCGC 5 cut(s) 1526, 1554, 1869, 1955, 2300
AclWI GGATC 3 cut(s) 1796, 1927, 1940
AcoI YGGCCR 4 cut(s) 13, 1211, 1309, 1356
AcuI CTGAAG 1 cut(s) 1395
AcvI CACGTG 2 cut(s) 1978, 2662
AdeI CACNNNGTG 1 cut(s) 1522
AfiI CCNNNNNNNGG 8 cut(s) 251, 830, 1332, 1458, 1522, 1879, 2857, 3397
AflII CTTAAG 1 cut(s) 2447
AflIII ACRYGT 4 cut(s) 34, 688, 813, 2659
AhdI GACNNNNNGTC 1 cut(s) 640
AhlI ACTAGT 2 cut(s) 1376, 3415
AjnI CCWGG 5 cut(s) 535, 1878, 2224, 3196, 3599
AleI CACNNNNGTG 2 cut(s) 1854, 2660
AloI GAACNNNNNNTCC 2 cut(s) 1046, 1078
Alw21I GWGCWC 3 cut(s) 451, 1111, 1867
Alw26I GTCTC 6 cut(s) 888, 1133, 2628, 3046, 3573, 3836
Alw44I GTGCAC 1 cut(s) 1107
AlwI GGATC 3 cut(s) 1796, 1927, 1940
Ama87I CYCGRG 3 cut(s) 868, 2855, 3083
AoxI GGCC 9 cut(s) 13, 1203, 1211, 1255, 1309, 1334, 1356, 3513, 3740
ApaLI GTGCAC 1 cut(s) 1107
ApeKI GCWGC 6 cut(s) 1484, 1503, 1512, 1846, 3229, 3430
ArsI GACNNNNNNTTYG 2 cut(s) 1214, 1246
Asp700I GAANNNNTTC 2 cut(s) 1076, 3536
AspLEI GCGC 3 cut(s) 1498, 1816, 2312
AspS9I GGNCC 6 cut(s) 242, 1204, 1255, 1367, 2039, 3513
AsuHPI GGTGA 7 cut(s) 644, 1141, 1841, 1897, 2194, 2296, 3541
AsuII TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
AsuNHI GCTAGC 1 cut(s) 1967
AvaI CYCGRG 3 cut(s) 868, 2855, 3083
AvaII GGWCC 3 cut(s) 242, 1367, 2039
AxyI CCTNAGG 2 cut(s) 1050, 1262
BaeGI GKGCMC 1 cut(s) 1111
BaeI ACNNNNGTAYC 2 cut(s) 154, 187
BalI TGGCCA 2 cut(s) 15, 1213
BamHI GGATCC 1 cut(s) 1932
BanI GGYRCC 1 cut(s) 833
BauI CACGAG 1 cut(s) 327
BbrPI CACGTG 2 cut(s) 1978, 2662
Bbv12I GWGCWC 3 cut(s) 451, 1111, 1867
BbvI GCAGC 6 cut(s) 1471, 1490, 1524, 1833, 3216, 3442
BccI CCATC 6 cut(s) 949, 1022, 1326, 1980, 3261, 3524
BceAI ACGGC 4 cut(s) 1296, 1321, 1589, 3851
BciT130I CCWGG 5 cut(s) 537, 1880, 2226, 3198, 3601
BciVI GTATCC 1 cut(s) 1048
BclI TGATCA 1 cut(s) 354
BcoDI GTCTC 6 cut(s) 888, 1133, 2628, 3046, 3573, 3836
BcuI ACTAGT 2 cut(s) 1376, 3415
BfmI CTRYAG 1 cut(s) 3639
BfrI CTTAAG 1 cut(s) 2447
BfuAI ACCTGC 1 cut(s) 1807
BfuI GTATCC 1 cut(s) 1048
BisI GCNGC 6 cut(s) 1485, 1504, 1513, 1847, 3230, 3431
BlpI GCTNAGC 1 cut(s) 3225
BlsI GCNGC 6 cut(s) 1486, 1505, 1514, 1848, 3231, 3432
BmcAI AGTACT 1 cut(s) 2152
Bme1390I CCNGG 5 cut(s) 537, 1880, 2226, 3198, 3601
Bme18I GGWCC 3 cut(s) 242, 1367, 2039
BmeRI GACNNNNNGTC 1 cut(s) 640
BmeT110I CYCGRG 3 cut(s) 868, 2855, 3083
BmgT120I GGNCC 6 cut(s) 242, 1204, 1255, 1367, 2039, 3513
BmiI GGNNCC 5 cut(s) 256, 835, 1369, 1934, 3090
BmrFI CCNGG 5 cut(s) 537, 1880, 2226, 3198, 3601
BmrI ACTGGG 1 cut(s) 1068
BmsI GCATC 5 cut(s) 152, 1691, 3297, 3366, 3557
BmtI GCTAGC 1 cut(s) 1971
BmuI ACTGGG 1 cut(s) 1068
BpmI CTGGAG 5 cut(s) 2208, 2673, 2721, 3219, 3622
Bpu10I CCTNAGC 1 cut(s) 1874
Bpu1102I GCTNAGC 1 cut(s) 3225
Bpu14I TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
BpuEI CTTGAG 1 cut(s) 1157
Bsa29I ATCGAT 1 cut(s) 2899
BsaAI YACGTR 8 cut(s) 73, 170, 491, 555, 1646, 1978, 2123, 2662
BsaI GGTCTC 3 cut(s) 1133, 3573, 3836
BsaJI CCNNGG 6 cut(s) 1125, 1200, 1416, 1879, 1928, 3599
BsaWI WCCGGW 1 cut(s) 1853
Bsc4I CCNNNNNNNGG 8 cut(s) 251, 830, 1332, 1458, 1522, 1879, 2857, 3397
Bse1I ACTGG 8 cut(s) 634, 921, 1063, 2042, 2055, 3595, 3663, 3846
Bse21I CCTNAGG 2 cut(s) 1050, 1262
Bse3DI GCAATG 1 cut(s) 1841
BseBI CCWGG 5 cut(s) 537, 1880, 2226, 3198, 3601
BseCI ATCGAT 1 cut(s) 2899
BseDI CCNNGG 6 cut(s) 1125, 1200, 1416, 1879, 1928, 3599
BseGI GGATG 6 cut(s) 563, 941, 3021, 3029, 3135, 3253
BseLI CCNNNNNNNGG 8 cut(s) 251, 830, 1332, 1458, 1522, 1879, 2857, 3397
BseMI GCAATG 1 cut(s) 1841
BseMII CTCAG 6 cut(s) 368, 1064, 1865, 3234, 3239, 3722
BseNI ACTGG 8 cut(s) 634, 921, 1063, 2042, 2055, 3595, 3663, 3846
BseRI GAGGAG 7 cut(s) 1038, 2562, 2616, 3285, 3354, 3410, 3413
BseSI GKGCMC 1 cut(s) 1111
BseXI GCAGC 6 cut(s) 1471, 1490, 1524, 1833, 3216, 3442
BseYI CCCAGC 2 cut(s) 2011, 2644
BsgI GTGCAG 3 cut(s) 993, 1832, 2079
Bsh1236I CGCG 4 cut(s) 690, 1498, 1624, 1957
BshFI GGCC 9 cut(s) 15, 1205, 1213, 1257, 1311, 1336, 1358, 3515, 3742
BshNI GGYRCC 1 cut(s) 833
BshVI ATCGAT 1 cut(s) 2899
BsiHKAI GWGCWC 3 cut(s) 451, 1111, 1867
BsiHKCI CYCGRG 3 cut(s) 868, 2855, 3083
BsiSI CCGG 2 cut(s) 1355, 1854
BslFI GGGAC 1 cut(s) 1096
BslI CCNNNNNNNGG 8 cut(s) 251, 830, 1332, 1458, 1522, 1879, 2857, 3397
BsmAI GTCTC 6 cut(s) 888, 1133, 2628, 3046, 3573, 3836
BsmBI CGTCTC 1 cut(s) 888
BsmFI GGGAC 1 cut(s) 1096
BsmI GAATGC 1 cut(s) 2104
BsnI GGCC 9 cut(s) 15, 1205, 1213, 1257, 1311, 1336, 1358, 3515, 3742
Bso31I GGTCTC 3 cut(s) 1133, 3573, 3836
BsoBI CYCGRG 3 cut(s) 868, 2855, 3083
Bsp119I TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
Bsp1286I GDGCHC 3 cut(s) 451, 1111, 1867
Bsp1407I TGTACA 1 cut(s) 2021
Bsp1720I GCTNAGC 1 cut(s) 3225
Bsp19I CCATGG 1 cut(s) 1125
BspACI CCGC 5 cut(s) 1526, 1554, 1869, 1955, 2300
BspANI GGCC 9 cut(s) 15, 1205, 1213, 1257, 1311, 1336, 1358, 3515, 3742
BspCNI CTCAG 6 cut(s) 369, 1063, 1866, 3233, 3238, 3723
BspDI ATCGAT 1 cut(s) 2899
BspFNI CGCG 4 cut(s) 690, 1498, 1624, 1957
BspHI TCATGA 1 cut(s) 402
BspLI GGNNCC 5 cut(s) 256, 835, 1369, 1934, 3090
BspMI ACCTGC 1 cut(s) 1807
BspOI GCTAGC 1 cut(s) 1971
BspPI GGATC 3 cut(s) 1796, 1927, 1940
BspQI GCTCTTC 1 cut(s) 2556
BspT104I TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
BspT107I GGYRCC 1 cut(s) 833
BspTI CTTAAG 1 cut(s) 2447
BspTNI GGTCTC 3 cut(s) 1133, 3573, 3836
BsrBI CCGCTC 2 cut(s) 1556, 2302
BsrDI GCAATG 1 cut(s) 1841
BsrGI TGTACA 1 cut(s) 2021
BsrI ACTGG 8 cut(s) 634, 921, 1063, 2042, 2055, 3595, 3663, 3846
BssECI CCNNGG 6 cut(s) 1125, 1200, 1416, 1879, 1928, 3599
BssSI CACGAG 1 cut(s) 327
BssT1I CCWWGG 3 cut(s) 1125, 1416, 1928
Bst2BI CACGAG 1 cut(s) 327
Bst2UI CCWGG 5 cut(s) 537, 1880, 2226, 3198, 3601
Bst4CI ACNGT 7 cut(s) 79, 1746, 2254, 3076, 3279, 3350, 3640
Bst6I CTCTTC 3 cut(s) 914, 2528, 2556
BstAFI CTTAAG 1 cut(s) 2447
BstAPI GCANNNNNTGC 2 cut(s) 2078, 3798
BstAUI TGTACA 1 cut(s) 2021
BstBAI YACGTR 8 cut(s) 73, 170, 491, 555, 1646, 1978, 2123, 2662
BstBI TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
BstC8I GCNNGC 3 cut(s) 1969, 2079, 3596
BstDSI CCRYGG 2 cut(s) 1125, 1200
BstENI CCTNNNNNAGG 2 cut(s) 1456, 1877
BstF5I GGATG 6 cut(s) 563, 941, 3021, 3029, 3135, 3253
BstFNI CGCG 4 cut(s) 690, 1498, 1624, 1957
BstHHI GCGC 3 cut(s) 1498, 1816, 2312
BstMAI GTCTC 6 cut(s) 888, 1133, 2628, 3046, 3573, 3836
BstMWI GCNNNNNNNGC 7 cut(s) 966, 1412, 1493, 1509, 1512, 2078, 3798
BstNI CCWGG 5 cut(s) 537, 1880, 2226, 3198, 3601
BstNSI RCATGY 4 cut(s) 38, 817, 2081, 3598
BstSCI CCNGG 5 cut(s) 535, 1878, 2224, 3196, 3599
BstSFI CTRYAG 1 cut(s) 3639
BstSLI GKGCMC 1 cut(s) 1111
BstSNI TACGTA 5 cut(s) 73, 170, 491, 1646, 2123
BstUI CGCG 4 cut(s) 690, 1498, 1624, 1957
BstV1I GCAGC 6 cut(s) 1471, 1490, 1524, 1833, 3216, 3442
BstX2I RGATCY 1 cut(s) 1932
BstXI CCANNNNNNTGG 4 cut(s) 1298, 2662, 2717, 3523
BstYI RGATCY 1 cut(s) 1932
Bsu15I ATCGAT 1 cut(s) 2899
Bsu36I CCTNAGG 2 cut(s) 1050, 1262
BsuI GTATCC 1 cut(s) 1048
BsuRI GGCC 9 cut(s) 15, 1205, 1213, 1257, 1311, 1336, 1358, 3515, 3742
BsuTUI ATCGAT 1 cut(s) 2899
BtgI CCRYGG 2 cut(s) 1125, 1200
BtgZI GCGATG 1 cut(s) 1900
BtsCI GGATG 6 cut(s) 563, 941, 3021, 3029, 3135, 3253
BtsI GCAGTG 2 cut(s) 2091, 3337
BtsIMutI CAGTG 5 cut(s) 2091, 3072, 3337, 3636, 3670
BveI ACCTGC 1 cut(s) 1807
Cac8I GCNNGC 3 cut(s) 1969, 2079, 3596
CciI TCATGA 1 cut(s) 402
CfoI GCGC 3 cut(s) 1498, 1816, 2312
Cfr13I GGNCC 6 cut(s) 242, 1204, 1255, 1367, 2039, 3513
ClaI ATCGAT 1 cut(s) 2899
CspCI CAANNNNNGTGG 6 cut(s) 1182, 1217, 3491, 3526, 3625, 3660
DraI TTTAAA 7 cut(s) 276, 310, 342, 1585, 1762, 2341, 2956
DraIII CACNNNGTG 1 cut(s) 1522
DriI GACNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 4 cut(s) 13, 1211, 1309, 1356
Eam1104I CTCTTC 3 cut(s) 914, 2528, 2556
Eam1105I GACNNNNNGTC 1 cut(s) 640
EarI CTCTTC 3 cut(s) 914, 2528, 2556
Eco105I TACGTA 5 cut(s) 73, 170, 491, 1646, 2123
Eco130I CCWWGG 3 cut(s) 1125, 1416, 1928
Eco31I GGTCTC 3 cut(s) 1133, 3573, 3836
Eco47I GGWCC 3 cut(s) 242, 1367, 2039
Eco57I CTGAAG 1 cut(s) 1395
Eco72I CACGTG 2 cut(s) 1978, 2662
Eco81I CCTNAGG 2 cut(s) 1050, 1262
Eco88I CYCGRG 3 cut(s) 868, 2855, 3083
EcoNI CCTNNNNNAGG 2 cut(s) 1456, 1877
EcoRI GAATTC 2 cut(s) 739, 1661
EcoRII CCWGG 5 cut(s) 535, 1878, 2224, 3196, 3599
EcoT14I CCWWGG 3 cut(s) 1125, 1416, 1928
EcoT22I ATGCAT 2 cut(s) 1684, 2106
ErhI CCWWGG 3 cut(s) 1125, 1416, 1928
Esp3I CGTCTC 1 cut(s) 888
FalI AAGNNNNNCTT 2 cut(s) 3537, 3569
FaqI GGGAC 1 cut(s) 1096
FauI CCCGC 3 cut(s) 1876, 1962, 2307
FauNDI CATATG 4 cut(s) 10, 1023, 3300, 3369
FbaI TGATCA 1 cut(s) 354
FblI GTMKAC 1 cut(s) 27
Fnu4HI GCNGC 6 cut(s) 1485, 1504, 1513, 1847, 3230, 3431
FokI GGATG 6 cut(s) 550, 928, 3016, 3028, 3122, 3240
Fsp4HI GCNGC 6 cut(s) 1485, 1504, 1513, 1847, 3230, 3431
GlaI GCGC 3 cut(s) 1497, 1815, 2311
GluI GCNGC 6 cut(s) 1485, 1504, 1513, 1847, 3230, 3431
GsaI CCCAGC 2 cut(s) 2015, 2648
GsuI CTGGAG 5 cut(s) 2208, 2673, 2721, 3219, 3622
HaeIII GGCC 9 cut(s) 15, 1205, 1213, 1257, 1311, 1336, 1358, 3515, 3742
HapII CCGG 2 cut(s) 1355, 1854
HhaI GCGC 3 cut(s) 1498, 1816, 2312
Hin6I GCGC 3 cut(s) 1496, 1814, 2310
HinP1I GCGC 3 cut(s) 1496, 1814, 2310
HincII GTYRAC 4 cut(s) 28, 905, 3499, 3699
HindII GTYRAC 4 cut(s) 28, 905, 3499, 3699
HindIII AAGCTT 1 cut(s) 2183
HinfI GANTC 6 cut(s) 62, 1045, 1132, 1545, 1550, 2512
HpaII CCGG 2 cut(s) 1355, 1854
HphI GGTGA 7 cut(s) 644, 1141, 1841, 1897, 2194, 2296, 3541
Hpy188I TCNGA 7 cut(s) 627, 1222, 1244, 1323, 1544, 2511, 3573
HpyCH4III ACNGT 7 cut(s) 79, 1746, 2254, 3076, 3279, 3350, 3640
HpyF10VI GCNNNNNNNGC 7 cut(s) 966, 1412, 1493, 1509, 1512, 2078, 3798
HspAI GCGC 3 cut(s) 1496, 1814, 2310
Ksp22I TGATCA 1 cut(s) 354
LguI GCTCTTC 1 cut(s) 2556
LmnI GCTCC 8 cut(s) 260, 446, 716, 1870, 2702, 3200, 3400, 3427
Lsp1109I GCAGC 6 cut(s) 1471, 1490, 1524, 1833, 3216, 3442
LweI GCATC 5 cut(s) 152, 1691, 3297, 3366, 3557
MbiI CCGCTC 2 cut(s) 1556, 2302
MfeI CAATTG 1 cut(s) 388
MflI RGATCY 1 cut(s) 1932
MhlI GDGCHC 3 cut(s) 451, 1111, 1867
MlsI TGGCCA 2 cut(s) 15, 1213
MluI ACGCGT 1 cut(s) 688
MluNI TGGCCA 2 cut(s) 15, 1213
MlyI GAGTC 3 cut(s) 1039, 1141, 1539
MmeI TCCRAC 2 cut(s) 1022, 1522
Mox20I TGGCCA 2 cut(s) 15, 1213
Mph1103I ATGCAT 2 cut(s) 1684, 2106
MroXI GAANNNNTTC 2 cut(s) 1076, 3536
MscI TGGCCA 2 cut(s) 15, 1213
MslI CAYNNNNRTG 8 cut(s) 1775, 1854, 1898, 2660, 2931, 3390, 3707, 3761
Msp20I TGGCCA 2 cut(s) 15, 1213
MspA1I CMGCKG 1 cut(s) 3229
MspCI CTTAAG 1 cut(s) 2447
MspI CCGG 2 cut(s) 1355, 1854
MspR9I CCNGG 5 cut(s) 537, 1880, 2226, 3198, 3601
MunI CAATTG 1 cut(s) 388
Mva1269I GAATGC 1 cut(s) 2104
MvaI CCWGG 5 cut(s) 537, 1880, 2226, 3198, 3601
MvnI CGCG 4 cut(s) 690, 1498, 1624, 1957
MwoI GCNNNNNNNGC 7 cut(s) 966, 1412, 1493, 1509, 1512, 2078, 3798
NcoI CCATGG 1 cut(s) 1125
NdeI CATATG 4 cut(s) 10, 1023, 3300, 3369
NheI GCTAGC 1 cut(s) 1967
NlaIV GGNNCC 5 cut(s) 256, 835, 1369, 1934, 3090
NsiI ATGCAT 2 cut(s) 1684, 2106
NspI RCATGY 4 cut(s) 38, 817, 2081, 3598
NspV TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
OliI CACNNNNGTG 2 cut(s) 1854, 2660
PaeI GCATGC 2 cut(s) 2081, 3598
PaeR7I CTCGAG 2 cut(s) 868, 3083
PagI TCATGA 1 cut(s) 402
PciI ACATGT 2 cut(s) 34, 813
PciSI GCTCTTC 1 cut(s) 2556
PctI GAATGC 1 cut(s) 2104
PdmI GAANNNNTTC 2 cut(s) 1076, 3536
PfeI GAWTC 3 cut(s) 62, 1550, 2512
PflMI CCANNNNNTGG 1 cut(s) 1522
PkrI GCNGC 6 cut(s) 1486, 1505, 1514, 1848, 3231, 3432
PleI GAGTC 3 cut(s) 1039, 1140, 1539
PmaCI CACGTG 2 cut(s) 1978, 2662
PmlI CACGTG 2 cut(s) 1978, 2662
PpsI GAGTC 3 cut(s) 1039, 1140, 1539
Ppu21I YACGTR 8 cut(s) 73, 170, 491, 555, 1646, 1978, 2123, 2662
PscI ACATGT 2 cut(s) 34, 813
PsiI TTATAA 2 cut(s) 2771, 3587
Psp6I CCWGG 5 cut(s) 535, 1878, 2224, 3196, 3599
PspCI CACGTG 2 cut(s) 1978, 2662
PspFI CCCAGC 2 cut(s) 2011, 2644
PspGI CCWGG 5 cut(s) 535, 1878, 2224, 3196, 3599
PspN4I GGNNCC 5 cut(s) 256, 835, 1369, 1934, 3090
PspPI GGNCC 6 cut(s) 242, 1204, 1255, 1367, 2039, 3513
PspXI VCTCGAGB 1 cut(s) 3083
PsuI RGATCY 1 cut(s) 1932
PvuII CAGCTG 1 cut(s) 3229
RseI CAYNNNNRTG 8 cut(s) 1775, 1854, 1898, 2660, 2931, 3390, 3707, 3761
SalI GTCGAC 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 2556
SatI GCNGC 6 cut(s) 1485, 1504, 1513, 1847, 3230, 3431
Sau96I GGNCC 6 cut(s) 242, 1204, 1255, 1367, 2039, 3513
ScaI AGTACT 1 cut(s) 2152
SchI GAGTC 3 cut(s) 1039, 1141, 1539
ScrFI CCNGG 5 cut(s) 537, 1880, 2226, 3198, 3601
SduI GDGCHC 3 cut(s) 451, 1111, 1867
SfaNI GCATC 5 cut(s) 152, 1691, 3297, 3366, 3557
SfcI CTRYAG 1 cut(s) 3639
Sfr274I CTCGAG 2 cut(s) 868, 3083
SfuI TTCGAA 5 cut(s) 599, 743, 1065, 1162, 2463
SinI GGWCC 3 cut(s) 242, 1367, 2039
SlaI CTCGAG 2 cut(s) 868, 3083
SmiI ATTTAAAT 1 cut(s) 1762
SmiMI CAYNNNNRTG 8 cut(s) 1775, 1854, 1898, 2660, 2931, 3390, 3707, 3761
SmlI CTYRAG 4 cut(s) 868, 1136, 2447, 3083
SmoI CTYRAG 4 cut(s) 868, 1136, 2447, 3083
SnaBI TACGTA 5 cut(s) 73, 170, 491, 1646, 2123
SpeI ACTAGT 2 cut(s) 1376, 3415
SphI GCATGC 2 cut(s) 2081, 3598
SsiI CCGC 5 cut(s) 1526, 1554, 1869, 1955, 2300
SspI AATATT 3 cut(s) 117, 1471, 1766
StyD4I CCNGG 5 cut(s) 535, 1878, 2224, 3196, 3599
StyI CCWWGG 3 cut(s) 1125, 1416, 1928
SwaI ATTTAAAT 1 cut(s) 1762
TaaI ACNGT 7 cut(s) 79, 1746, 2254, 3076, 3279, 3350, 3640
TatI WGTACW 6 cut(s) 79, 269, 1477, 2021, 2150, 2254
TfiI GAWTC 3 cut(s) 62, 1550, 2512
TscAI CASTG 5 cut(s) 2098, 3079, 3337, 3643, 3670
TseI GCWGC 6 cut(s) 1484, 1503, 1512, 1846, 3229, 3430
TspGWI ACGGA 4 cut(s) 74, 1550, 1823, 2152
TspRI CASTG 5 cut(s) 2098, 3079, 3337, 3643, 3670
Van91I CCANNNNNTGG 1 cut(s) 1522
Vha464I CTTAAG 1 cut(s) 2447
VneI GTGCAC 1 cut(s) 1107
VpaK11BI GGWCC 3 cut(s) 242, 1367, 2039
XagI CCTNNNNNAGG 2 cut(s) 1456, 1877
XbaI TCTAGA 1 cut(s) 3782
XceI RCATGY 4 cut(s) 38, 817, 2081, 3598
XcmI CCANNNNNNNNNTGG 1 cut(s) 1021
XhoI CTCGAG 2 cut(s) 868, 3083
XmiI GTMKAC 1 cut(s) 27
XmnI GAANNNNTTC 2 cut(s) 1076, 3536
ZrmI AGTACT 1 cut(s) 2152
Zsp2I ATGCAT 2 cut(s) 1684, 2106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.