Polyprotein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 2655, 2697, 2723, 3465 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1547 |
| AatII | GACGTC | 1 cut(s) | 1383 |
| Acc36I | ACCTGC | 3 cut(s) | 83, 1979, 3239 |
| AccB1I | GGYRCC | 1 cut(s) | 1515 |
| AccI | GTMKAC | 5 cut(s) | 49, 208, 2113, 2770, 3253 |
| AccII | CGCG | 2 cut(s) | 1647, 1887 |
| AciI | CCGC | 4 cut(s) | 941, 1840, 1885, 2398 |
| AclI | AACGTT | 1 cut(s) | 1737 |
| AclWI | GGATC | 4 cut(s) | 767, 1394, 1855, 1868 |
| AcoI | YGGCCR | 3 cut(s) | 871, 1639, 2434 |
| AcvI | CACGTG | 4 cut(s) | 1632, 1825, 1909, 2429 |
| AcyI | GRCGYC | 3 cut(s) | 1380, 1516, 1611 |
| AfaI | GTAC | 8 cut(s) | 591, 685, 842, 1004, 1164, 1215, 1956, 2980 |
| AflII | CTTAAG | 3 cut(s) | 43, 1708, 3176 |
| AflIII | ACRYGT | 1 cut(s) | 104 |
| AjiI | CACGTC | 1 cut(s) | 1287 |
| AjnI | CCWGG | 5 cut(s) | 154, 229, 1624, 1943, 2209 |
| AleI | CACNNNNGTG | 3 cut(s) | 383, 1332, 1661 |
| AluBI | AGCT | 8 cut(s) | 476, 1051, 2170, 2359, 2394, 2626, 2719, 3005 |
| AluI | AGCT | 8 cut(s) | 476, 1051, 2170, 2359, 2394, 2626, 2719, 3005 |
| Alw21I | GWGCWC | 3 cut(s) | 1877, 2046, 2409 |
| Alw26I | GTCTC | 1 cut(s) | 428 |
| Alw44I | GTGCAC | 2 cut(s) | 1873, 2405 |
| AlwI | GGATC | 4 cut(s) | 767, 1394, 1855, 1868 |
| Ama87I | CYCGRG | 2 cut(s) | 1294, 1352 |
| AoxI | GGCC | 5 cut(s) | 871, 1405, 1639, 1946, 2434 |
| ApaLI | GTGCAC | 2 cut(s) | 1873, 2405 |
| ApeKI | GCWGC | 1 cut(s) | 3491 |
| AseI | ATTAAT | 1 cut(s) | 32 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2617 |
| AspLEI | GCGC | 3 cut(s) | 1518, 1647, 2204 |
| AspS9I | GGNCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| AsuC2I | CCSGG | 2 cut(s) | 1428, 2258 |
| AsuHPI | GGTGA | 4 cut(s) | 742, 1093, 1346, 2270 |
| AsuNHI | GCTAGC | 1 cut(s) | 2224 |
| AvaI | CYCGRG | 2 cut(s) | 1294, 1352 |
| AvaII | GGWCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| AxyI | CCTNAGG | 2 cut(s) | 1343, 2246 |
| BaeGI | GKGCMC | 3 cut(s) | 1814, 1877, 2409 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1263, 1296 |
| BalI | TGGCCA | 1 cut(s) | 873 |
| BamHI | GGATCC | 1 cut(s) | 1860 |
| BanI | GGYRCC | 1 cut(s) | 1515 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 973, 1005 |
| BauI | CACGAG | 2 cut(s) | 1227, 1981 |
| BbrPI | CACGTG | 4 cut(s) | 1632, 1825, 1909, 2429 |
| BbsI | GAAGAC | 1 cut(s) | 1542 |
| Bbv12I | GWGCWC | 3 cut(s) | 1877, 2046, 2409 |
| BbvI | GCAGC | 1 cut(s) | 3503 |
| BccI | CCATC | 5 cut(s) | 1558, 2847, 3237, 3358, 3495 |
| BceAI | ACGGC | 4 cut(s) | 1543, 1598, 1614, 2449 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1967, 2001 |
| BciT130I | CCWGG | 5 cut(s) | 156, 231, 1626, 1945, 2211 |
| BciVI | GTATCC | 2 cut(s) | 1264, 1292 |
| BclI | TGATCA | 4 cut(s) | 88, 664, 817, 2955 |
| BcnI | CCSGG | 2 cut(s) | 1428, 2258 |
| BcoDI | GTCTC | 1 cut(s) | 428 |
| BfoI | RGCGCY | 1 cut(s) | 1519 |
| BfrI | CTTAAG | 3 cut(s) | 43, 1708, 3176 |
| BfuAI | ACCTGC | 3 cut(s) | 83, 1979, 3239 |
| BfuI | GTATCC | 2 cut(s) | 1264, 1292 |
| BglII | AGATCT | 1 cut(s) | 532 |
| BisI | GCNGC | 1 cut(s) | 3492 |
| BlsI | GCNGC | 1 cut(s) | 3493 |
| Bme1390I | CCNGG | 7 cut(s) | 156, 231, 1428, 1626, 1945, 2211, 2258 |
| Bme18I | GGWCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| BmeT110I | CYCGRG | 2 cut(s) | 1294, 1352 |
| BmgBI | CACGTC | 1 cut(s) | 1287 |
| BmgT120I | GGNCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| BmiI | GGNNCC | 4 cut(s) | 1517, 1523, 1862, 1975 |
| BmrFI | CCNGG | 7 cut(s) | 156, 231, 1428, 1626, 1945, 2211, 2258 |
| BmsI | GCATC | 2 cut(s) | 1128, 1784 |
| BmtI | GCTAGC | 1 cut(s) | 2228 |
| BpiI | GAAGAC | 1 cut(s) | 1542 |
| BpmI | CTGGAG | 1 cut(s) | 2193 |
| BpuEI | CTTGAG | 3 cut(s) | 460, 1943, 2060 |
| BpuMI | CCSGG | 2 cut(s) | 1428, 2258 |
| Bsa29I | ATCGAT | 1 cut(s) | 2842 |
| BsaAI | YACGTR | 5 cut(s) | 1632, 1825, 1909, 2429, 3413 |
| BsaBI | GATNNNNATC | 3 cut(s) | 2453, 3313, 3349 |
| BsaHI | GRCGYC | 3 cut(s) | 1380, 1516, 1611 |
| BsaI | GGTCTC | 1 cut(s) | 428 |
| BsaJI | CCNNGG | 5 cut(s) | 1330, 1439, 1636, 1943, 2256 |
| BsaWI | WCCGGW | 1 cut(s) | 2975 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1069, 1099 |
| Bse118I | RCCGGY | 1 cut(s) | 1641 |
| Bse1I | ACTGG | 4 cut(s) | 753, 1779, 2281, 3337 |
| Bse21I | CCTNAGG | 2 cut(s) | 1343, 2246 |
| Bse8I | GATNNNNATC | 3 cut(s) | 2453, 3313, 3349 |
| BseBI | CCWGG | 5 cut(s) | 156, 231, 1626, 1945, 2211 |
| BseCI | ATCGAT | 1 cut(s) | 2842 |
| BseDI | CCNNGG | 5 cut(s) | 1330, 1439, 1636, 1943, 2256 |
| BseGI | GGATG | 4 cut(s) | 349, 1119, 2719, 2972 |
| BseJI | GATNNNNATC | 3 cut(s) | 2453, 3313, 3349 |
| BseMII | CTCAG | 2 cut(s) | 1400, 2237 |
| BseNI | ACTGG | 4 cut(s) | 753, 1779, 2281, 3337 |
| BseSI | GKGCMC | 3 cut(s) | 1814, 1877, 2409 |
| BseXI | GCAGC | 1 cut(s) | 3503 |
| BseYI | CCCAGC | 1 cut(s) | 1898 |
| BsgI | GTGCAG | 1 cut(s) | 2007 |
| Bsh1236I | CGCG | 2 cut(s) | 1647, 1887 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2457 |
| BshFI | GGCC | 5 cut(s) | 873, 1407, 1641, 1948, 2436 |
| BshNI | GGYRCC | 1 cut(s) | 1515 |
| BshVI | ATCGAT | 1 cut(s) | 2842 |
| BsiEI | CGRYCG | 1 cut(s) | 2457 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1877, 2046, 2409 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1294, 1352 |
| BsiSI | CCGG | 7 cut(s) | 1428, 1519, 1530, 1642, 2003, 2258, 2976 |
| BslFI | GGGAC | 1 cut(s) | 1111 |
| BsmAI | GTCTC | 1 cut(s) | 428 |
| BsmFI | GGGAC | 1 cut(s) | 1111 |
| BsmI | GAATGC | 1 cut(s) | 3395 |
| BsnI | GGCC | 5 cut(s) | 873, 1407, 1641, 1948, 2436 |
| Bso31I | GGTCTC | 1 cut(s) | 428 |
| BsoBI | CYCGRG | 2 cut(s) | 1294, 1352 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1814, 1877, 2046, 2409 |
| BspACI | CCGC | 4 cut(s) | 941, 1840, 1885, 2398 |
| BspANI | GGCC | 5 cut(s) | 873, 1407, 1641, 1948, 2436 |
| BspCNI | CTCAG | 2 cut(s) | 1401, 2238 |
| BspDI | ATCGAT | 1 cut(s) | 2842 |
| BspFNI | CGCG | 2 cut(s) | 1647, 1887 |
| BspHI | TCATGA | 1 cut(s) | 667 |
| BspLI | GGNNCC | 4 cut(s) | 1517, 1523, 1862, 1975 |
| BspMI | ACCTGC | 3 cut(s) | 83, 1979, 3239 |
| BspOI | GCTAGC | 1 cut(s) | 2228 |
| BspPI | GGATC | 4 cut(s) | 767, 1394, 1855, 1868 |
| BspT107I | GGYRCC | 1 cut(s) | 1515 |
| BspTI | CTTAAG | 3 cut(s) | 43, 1708, 3176 |
| BspTNI | GGTCTC | 1 cut(s) | 428 |
| BsrFI | RCCGGY | 1 cut(s) | 1641 |
| BsrI | ACTGG | 4 cut(s) | 753, 1779, 2281, 3337 |
| BssAI | RCCGGY | 1 cut(s) | 1641 |
| BssECI | CCNNGG | 5 cut(s) | 1330, 1439, 1636, 1943, 2256 |
| BssNAI | GTATAC | 2 cut(s) | 2114, 3254 |
| BssNI | GRCGYC | 3 cut(s) | 1380, 1516, 1611 |
| BssSI | CACGAG | 2 cut(s) | 1227, 1981 |
| BssT1I | CCWWGG | 2 cut(s) | 1330, 1636 |
| Bst1107I | GTATAC | 2 cut(s) | 2114, 3254 |
| Bst2BI | CACGAG | 2 cut(s) | 1227, 1981 |
| Bst2UI | CCWGG | 5 cut(s) | 156, 231, 1626, 1945, 2211 |
| Bst4CI | ACNGT | 8 cut(s) | 60, 636, 958, 1318, 1816, 1879, 2404, 3052 |
| Bst6I | CTCTTC | 3 cut(s) | 439, 855, 2730 |
| BstACI | GRCGYC | 3 cut(s) | 1380, 1516, 1611 |
| BstAFI | CTTAAG | 3 cut(s) | 43, 1708, 3176 |
| BstBAI | YACGTR | 5 cut(s) | 1632, 1825, 1909, 2429, 3413 |
| BstC8I | GCNNGC | 7 cut(s) | 130, 1622, 1643, 1649, 2226, 2438, 2442 |
| BstDEI | CTNAG | 5 cut(s) | 461, 1343, 1409, 2246, 3016 |
| BstDSI | CCRYGG | 1 cut(s) | 1439 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1334 |
| BstF5I | GGATG | 4 cut(s) | 349, 1119, 2719, 2972 |
| BstFNI | CGCG | 2 cut(s) | 1647, 1887 |
| BstH2I | RGCGCY | 1 cut(s) | 1519 |
| BstHHI | GCGC | 3 cut(s) | 1518, 1647, 2204 |
| BstMAI | GTCTC | 1 cut(s) | 428 |
| BstMCI | CGRYCG | 1 cut(s) | 2457 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 1626, 1653, 1848, 2814 |
| BstNI | CCWGG | 5 cut(s) | 156, 231, 1626, 1945, 2211 |
| BstNSI | RCATGY | 2 cut(s) | 108, 2444 |
| BstSCI | CCNGG | 7 cut(s) | 154, 229, 1426, 1624, 1943, 2209, 2256 |
| BstSLI | GKGCMC | 3 cut(s) | 1814, 1877, 2409 |
| BstSNI | TACGTA | 1 cut(s) | 3413 |
| BstUI | CGCG | 2 cut(s) | 1647, 1887 |
| BstV1I | GCAGC | 1 cut(s) | 3503 |
| BstV2I | GAAGAC | 1 cut(s) | 1542 |
| BstX2I | RGATCY | 2 cut(s) | 532, 1860 |
| BstYI | RGATCY | 2 cut(s) | 532, 1860 |
| BstZ17I | GTATAC | 2 cut(s) | 2114, 3254 |
| Bsu15I | ATCGAT | 1 cut(s) | 2842 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1343, 2246 |
| BsuI | GTATCC | 2 cut(s) | 1264, 1292 |
| BsuRI | GGCC | 5 cut(s) | 873, 1407, 1641, 1948, 2436 |
| BsuTUI | ATCGAT | 1 cut(s) | 2842 |
| BtgI | CCRYGG | 1 cut(s) | 1439 |
| BtrI | CACGTC | 1 cut(s) | 1287 |
| BtsCI | GGATG | 4 cut(s) | 349, 1119, 2719, 2972 |
| BtsIMutI | CAGTG | 4 cut(s) | 1314, 1884, 2288, 2400 |
| BveI | ACCTGC | 3 cut(s) | 83, 1979, 3239 |
| Cac8I | GCNNGC | 7 cut(s) | 130, 1622, 1643, 1649, 2226, 2438, 2442 |
| CciI | TCATGA | 1 cut(s) | 667 |
| CfoI | GCGC | 3 cut(s) | 1518, 1647, 2204 |
| Cfr10I | RCCGGY | 1 cut(s) | 1641 |
| Cfr13I | GGNCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| ClaI | ATCGAT | 1 cut(s) | 2842 |
| CseI | GACGC | 2 cut(s) | 1619, 1662 |
| CsiI | ACCWGGT | 1 cut(s) | 229 |
| Csp6I | GTAC | 8 cut(s) | 590, 684, 841, 1003, 1163, 1214, 1955, 2979 |
| CviAII | CATG | 8 cut(s) | 95, 105, 668, 1223, 1322, 2018, 2410, 2441 |
| CviQI | GTAC | 8 cut(s) | 590, 684, 841, 1003, 1163, 1214, 1955, 2979 |
| DdeI | CTNAG | 5 cut(s) | 461, 1343, 1409, 2246, 3016 |
| DinI | GGCGCC | 1 cut(s) | 1517 |
| DraI | TTTAAA | 4 cut(s) | 651, 778, 1729, 3541 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1547 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1547 |
| EaeI | YGGCCR | 3 cut(s) | 871, 1639, 2434 |
| Eam1104I | CTCTTC | 3 cut(s) | 439, 855, 2730 |
| EarI | CTCTTC | 3 cut(s) | 439, 855, 2730 |
| Eco105I | TACGTA | 1 cut(s) | 3413 |
| Eco130I | CCWWGG | 2 cut(s) | 1330, 1636 |
| Eco147I | AGGCCT | 1 cut(s) | 1948 |
| Eco31I | GGTCTC | 1 cut(s) | 428 |
| Eco47I | GGWCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| Eco72I | CACGTG | 4 cut(s) | 1632, 1825, 1909, 2429 |
| Eco81I | CCTNAGG | 2 cut(s) | 1343, 2246 |
| Eco88I | CYCGRG | 2 cut(s) | 1294, 1352 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1334 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1339 |
| EcoRII | CCWGG | 5 cut(s) | 154, 229, 1624, 1943, 2209 |
| EcoT14I | CCWWGG | 2 cut(s) | 1330, 1636 |
| EcoT22I | ATGCAT | 1 cut(s) | 1799 |
| EgeI | GGCGCC | 1 cut(s) | 1517 |
| EheI | GGCGCC | 1 cut(s) | 1517 |
| ErhI | CCWWGG | 2 cut(s) | 1330, 1636 |
| FaeI | CATG | 8 cut(s) | 98, 108, 671, 1226, 1325, 2021, 2413, 2444 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1259, 1291 |
| FaqI | GGGAC | 1 cut(s) | 1111 |
| FatI | CATG | 8 cut(s) | 94, 104, 667, 1222, 1321, 2017, 2409, 2440 |
| FauI | CCCGC | 3 cut(s) | 948, 1847, 1892 |
| FauNDI | CATATG | 1 cut(s) | 2683 |
| FbaI | TGATCA | 4 cut(s) | 88, 664, 817, 2955 |
| FblI | GTMKAC | 5 cut(s) | 49, 208, 2113, 2770, 3253 |
| Fnu4HI | GCNGC | 1 cut(s) | 3492 |
| FokI | GGATG | 4 cut(s) | 336, 1106, 2726, 2959 |
| Fsp4HI | GCNGC | 1 cut(s) | 3492 |
| GlaI | GCGC | 3 cut(s) | 1517, 1646, 2203 |
| GluI | GCNGC | 1 cut(s) | 3492 |
| GsaI | CCCAGC | 1 cut(s) | 1902 |
| GsuI | CTGGAG | 1 cut(s) | 2193 |
| HaeII | RGCGCY | 1 cut(s) | 1519 |
| HaeIII | GGCC | 5 cut(s) | 873, 1407, 1641, 1948, 2436 |
| HapII | CCGG | 7 cut(s) | 1428, 1519, 1530, 1642, 2003, 2258, 2976 |
| HgaI | GACGC | 2 cut(s) | 1619, 1662 |
| HhaI | GCGC | 3 cut(s) | 1518, 1647, 2204 |
| Hin1I | GRCGYC | 3 cut(s) | 1380, 1516, 1611 |
| Hin1II | CATG | 8 cut(s) | 98, 108, 671, 1226, 1325, 2021, 2413, 2444 |
| Hin6I | GCGC | 3 cut(s) | 1516, 1645, 2202 |
| HinP1I | GCGC | 3 cut(s) | 1516, 1645, 2202 |
| HincII | GTYRAC | 3 cut(s) | 218, 1582, 1605 |
| HindII | GTYRAC | 3 cut(s) | 218, 1582, 1605 |
| HindIII | AAGCTT | 1 cut(s) | 2168 |
| HpaI | GTTAAC | 2 cut(s) | 1582, 1605 |
| HpaII | CCGG | 7 cut(s) | 1428, 1519, 1530, 1642, 2003, 2258, 2976 |
| HphI | GGTGA | 4 cut(s) | 742, 1093, 1346, 2270 |
| Hpy188I | TCNGA | 6 cut(s) | 712, 922, 1978, 2268, 2623, 3264 |
| Hpy99I | CGWCG | 5 cut(s) | 1035, 1291, 1385, 1544, 1656 |
| HpyCH4III | ACNGT | 8 cut(s) | 60, 636, 958, 1318, 1816, 1879, 2404, 3052 |
| HpyCH4V | TGCA | 9 cut(s) | 78, 388, 1119, 1325, 1797, 1875, 1988, 2050, 2407 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 1626, 1653, 1848, 2814 |
| HpyF3I | CTNAG | 5 cut(s) | 461, 1343, 1409, 2246, 3016 |
| Hsp92I | GRCGYC | 3 cut(s) | 1380, 1516, 1611 |
| Hsp92II | CATG | 8 cut(s) | 98, 108, 671, 1226, 1325, 2021, 2413, 2444 |
| HspAI | GCGC | 3 cut(s) | 1516, 1645, 2202 |
| KasI | GGCGCC | 1 cut(s) | 1515 |
| KroI | GCCGGC | 1 cut(s) | 1641 |
| KroNI | GCCGGC | 1 cut(s) | 1643 |
| Ksp22I | TGATCA | 4 cut(s) | 88, 664, 817, 2955 |
| KspAI | GTTAAC | 2 cut(s) | 1582, 1605 |
| LmnI | GCTCC | 2 cut(s) | 1521, 2841 |
| Lsp1109I | GCAGC | 1 cut(s) | 3503 |
| LweI | GCATC | 2 cut(s) | 1128, 1784 |
| MabI | ACCWGGT | 1 cut(s) | 229 |
| MflI | RGATCY | 2 cut(s) | 532, 1860 |
| MhlI | GDGCHC | 4 cut(s) | 1814, 1877, 2046, 2409 |
| MlsI | TGGCCA | 1 cut(s) | 873 |
| MluNI | TGGCCA | 1 cut(s) | 873 |
| Mly113I | GGCGCC | 1 cut(s) | 1516 |
| MlyI | GAGTC | 5 cut(s) | 160, 872, 1973, 1993, 3287 |
| MmeI | TCCRAC | 1 cut(s) | 2001 |
| Mox20I | TGGCCA | 1 cut(s) | 873 |
| Mph1103I | ATGCAT | 1 cut(s) | 1799 |
| MroNI | GCCGGC | 1 cut(s) | 1641 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2617 |
| MscI | TGGCCA | 1 cut(s) | 873 |
| MslI | CAYNNNNRTG | 6 cut(s) | 383, 1221, 1227, 1332, 1661, 3241 |
| Msp20I | TGGCCA | 1 cut(s) | 873 |
| MspCI | CTTAAG | 3 cut(s) | 43, 1708, 3176 |
| MspI | CCGG | 7 cut(s) | 1428, 1519, 1530, 1642, 2003, 2258, 2976 |
| MspR9I | CCNGG | 7 cut(s) | 156, 231, 1428, 1626, 1945, 2211, 2258 |
| Mva1269I | GAATGC | 1 cut(s) | 3395 |
| MvaI | CCWGG | 5 cut(s) | 156, 231, 1626, 1945, 2211 |
| MvnI | CGCG | 2 cut(s) | 1647, 1887 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 1626, 1653, 1848, 2814 |
| NaeI | GCCGGC | 1 cut(s) | 1643 |
| NarI | GGCGCC | 1 cut(s) | 1516 |
| NciI | CCSGG | 2 cut(s) | 1428, 2258 |
| NdeI | CATATG | 1 cut(s) | 2683 |
| NgoMIV | GCCGGC | 1 cut(s) | 1641 |
| NheI | GCTAGC | 1 cut(s) | 2224 |
| NlaIII | CATG | 8 cut(s) | 98, 108, 671, 1226, 1325, 2021, 2413, 2444 |
| NlaIV | GGNNCC | 4 cut(s) | 1517, 1523, 1862, 1975 |
| NmeAIII | GCCGAG | 1 cut(s) | 603 |
| NmuCI | GTSAC | 5 cut(s) | 1879, 1996, 2418, 2429, 3279 |
| NsiI | ATGCAT | 1 cut(s) | 1799 |
| NspI | RCATGY | 2 cut(s) | 108, 2444 |
| OliI | CACNNNNGTG | 3 cut(s) | 383, 1332, 1661 |
| PaeI | GCATGC | 1 cut(s) | 2444 |
| PagI | TCATGA | 1 cut(s) | 667 |
| PceI | AGGCCT | 1 cut(s) | 1948 |
| PciI | ACATGT | 1 cut(s) | 104 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 1234, 1301, 1386, 1395, 1617 |
| PctI | GAATGC | 1 cut(s) | 3395 |
| PdiI | GCCGGC | 1 cut(s) | 1643 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2617 |
| PfeI | GAWTC | 6 cut(s) | 722, 917, 1435, 1568, 2139, 3518 |
| PflFI | GACNNNGTC | 2 cut(s) | 213, 1613 |
| PkrI | GCNGC | 1 cut(s) | 3493 |
| Ple19I | CGATCG | 1 cut(s) | 2457 |
| PleI | GAGTC | 5 cut(s) | 160, 871, 1973, 1993, 3286 |
| PluTI | GGCGCC | 1 cut(s) | 1519 |
| PmaCI | CACGTG | 4 cut(s) | 1632, 1825, 1909, 2429 |
| PmlI | CACGTG | 4 cut(s) | 1632, 1825, 1909, 2429 |
| PpsI | GAGTC | 5 cut(s) | 160, 871, 1973, 1993, 3286 |
| Ppu21I | YACGTR | 5 cut(s) | 1632, 1825, 1909, 2429, 3413 |
| PpuMI | RGGWCCY | 1 cut(s) | 1339 |
| PscI | ACATGT | 1 cut(s) | 104 |
| PshBI | ATTAAT | 1 cut(s) | 32 |
| PsiI | TTATAA | 4 cut(s) | 2655, 2697, 2723, 3465 |
| Psp1406I | AACGTT | 1 cut(s) | 1737 |
| Psp5II | RGGWCCY | 1 cut(s) | 1339 |
| Psp6I | CCWGG | 5 cut(s) | 154, 229, 1624, 1943, 2209 |
| PspCI | CACGTG | 4 cut(s) | 1632, 1825, 1909, 2429 |
| PspFI | CCCAGC | 1 cut(s) | 1898 |
| PspGI | CCWGG | 5 cut(s) | 154, 229, 1624, 1943, 2209 |
| PspN4I | GGNNCC | 4 cut(s) | 1517, 1523, 1862, 1975 |
| PspPI | GGNCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| PspPPI | RGGWCCY | 1 cut(s) | 1339 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1283, 1315 |
| PsuI | RGATCY | 2 cut(s) | 532, 1860 |
| PsyI | GACNNNGTC | 2 cut(s) | 213, 1613 |
| PvuI | CGATCG | 1 cut(s) | 2457 |
| RsaI | GTAC | 8 cut(s) | 591, 685, 842, 1004, 1164, 1215, 1956, 2980 |
| RsaNI | GTAC | 8 cut(s) | 590, 684, 841, 1003, 1163, 1214, 1955, 2979 |
| RseI | CAYNNNNRTG | 6 cut(s) | 383, 1221, 1227, 1332, 1661, 3241 |
| SatI | GCNGC | 1 cut(s) | 3492 |
| Sau96I | GGNCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| SchI | GAGTC | 5 cut(s) | 160, 872, 1973, 1993, 3287 |
| ScrFI | CCNGG | 7 cut(s) | 156, 231, 1428, 1626, 1945, 2211, 2258 |
| SduI | GDGCHC | 4 cut(s) | 1814, 1877, 2046, 2409 |
| SexAI | ACCWGGT | 1 cut(s) | 229 |
| SfaNI | GCATC | 2 cut(s) | 1128, 1784 |
| SfoI | GGCGCC | 1 cut(s) | 1517 |
| SinI | GGWCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 383, 1221, 1227, 1332, 1661, 3241 |
| SmlI | CTYRAG | 6 cut(s) | 43, 439, 1708, 1922, 2039, 3176 |
| SmoI | CTYRAG | 6 cut(s) | 43, 439, 1708, 1922, 2039, 3176 |
| SnaBI | TACGTA | 1 cut(s) | 3413 |
| SphI | GCATGC | 1 cut(s) | 2444 |
| SseBI | AGGCCT | 1 cut(s) | 1948 |
| SsiI | CCGC | 4 cut(s) | 941, 1840, 1885, 2398 |
| SspDI | GGCGCC | 1 cut(s) | 1515 |
| SspI | AATATT | 8 cut(s) | 730, 829, 952, 1590, 2487, 2747, 3119, 3423 |
| StuI | AGGCCT | 1 cut(s) | 1948 |
| StyD4I | CCNGG | 7 cut(s) | 154, 229, 1426, 1624, 1943, 2209, 2256 |
| StyI | CCWWGG | 2 cut(s) | 1330, 1636 |
| TaaI | ACNGT | 8 cut(s) | 60, 636, 958, 1318, 1816, 1879, 2404, 3052 |
| TaqI | TCGA | 6 cut(s) | 1201, 1289, 1363, 1398, 2453, 2842 |
| TatI | WGTACW | 3 cut(s) | 589, 683, 1213 |
| TfiI | GAWTC | 6 cut(s) | 722, 917, 1435, 1568, 2139, 3518 |
| TscAI | CASTG | 4 cut(s) | 1321, 1884, 2288, 2407 |
| TseFI | GTSAC | 5 cut(s) | 1879, 1996, 2418, 2429, 3279 |
| TseI | GCWGC | 1 cut(s) | 3491 |
| Tsp45I | GTSAC | 5 cut(s) | 1879, 1996, 2418, 2429, 3279 |
| TspGWI | ACGGA | 6 cut(s) | 1180, 1226, 1428, 1557, 1561, 1599 |
| TspRI | CASTG | 4 cut(s) | 1321, 1884, 2288, 2407 |
| Tth111I | GACNNNGTC | 2 cut(s) | 213, 1613 |
| Vha464I | CTTAAG | 3 cut(s) | 43, 1708, 3176 |
| VneI | GTGCAC | 2 cut(s) | 1873, 2405 |
| VpaK11BI | GGWCC | 4 cut(s) | 1070, 1234, 1339, 2289 |
| VspI | ATTAAT | 1 cut(s) | 32 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1334 |
| XbaI | TCTAGA | 1 cut(s) | 3025 |
| XceI | RCATGY | 2 cut(s) | 108, 2444 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2217 |
| XmiI | GTMKAC | 5 cut(s) | 49, 208, 2113, 2770, 3253 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2617 |
| ZraI | GACGTC | 1 cut(s) | 1381 |
| Zsp2I | ATGCAT | 1 cut(s) | 1799 |