pycom11g13940

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000513
Physical Location & Seq
Forward (+)
13733141 .. 13736124
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g13940.15

Sequence Viewer

Length: 2235 bp
ATGAAAAATAAGAGTCAGTCAAGTGTTAAACGTTATGCATTAAAGGGTAGGGTATTACTTAACTACCTAAACCCTAAACGATACATCTCTTCGGCAAACAGTATACTTGAGTTTTATAAAAAAAAAAACTCAAGAACTATTTATGTTTGTTTCGTTGTGTGGTCGTTTTTGGAATTTGGTTGGTTGATTTTGGACCACAAACACACATCCACACTCATTCCTCTCTCTTTGCCCTGTCCCGTATCTGTCTCTCCTTCTCTCTCCTCTCTTCTCTTCACCATACATACGGACAACACCAAAACCATTGCTAACGTTGCGGATCGAGGAAACAAACTACATATTTGTGCTCGTGAGCTTCTTAGGAATTCAACCATACCCATTTCAGGTAAGGGAACCCTTGTTTTCACGTCGAACCCGAGAGGTGTAAATCGGGGTATTGTTCATGCACACCTTGGTGAGGTCCTTAGAAGGCTCGGGGTGGTTCGTTTGAAGGTTTTGGTCGTCGGGATCGTGAGTTGCAGGTTTGGCCGGAGTTGGTGTTTTCCCGGCGAGTTTTCGTTGGTTTTAGTGCTTGAAAGTGGTAAGGATTTGTTCCTATATGAGATACGAAGTTTGGAAGTTTTCCCGGTTTTCCGGCGACGGCGCCGGAGTTTGGCCGGAGAAGATGACGGAATATTCCTAATGGCGTTAACGGAATCTGTTAGACTTGACGGAATATTTCTGACGGCGTTAACTGACGCCGTCAATGTGCCAGGCACGTGCCTGCGCGTGGGCGGCGCGTGTGGCCATGCCTTGGCCCGTGCATGGGGGCGTGTACGGTGTCAGAAAATTATTTTAAAAATATGGGGATTTGAGCATTGTATGAGAAGTTGTTTCGTAATGTTGGTTATGCGCTTTAAAATTTATGTTTTTATAGTTGTTTCACATATAGGTGAGACCTATCCCGAGGACGAGTTGGGCTTTTGGTTTTCCGTATATACCTATATACTTGTGATTTTCCCAGAAAATGAAATTAAACGTTTATTTGTTTTATATGCCATGCATTATGTTTGCCTGGTTAATTATGCATTATTATTTGCATATATACATATGTTTGGTGCTGCGGACGCGCAGGTAAGTGCCAGGCATAGAGAGCTCATAACCTGCACCCCCGGTGTTAGTGCTCCCGCCCAGAGTAGGGCACAGTCCTTCACATGTTGTTCACCTCCCGCACCACATGCTTATCTTGGATCCAAGTTAGGTGCACAATCTTGTCGTACAGACCACTTTAGGTGGTTCCGACTCGTAGGTGACCCGCGATTATTCGCCTATTACACCCAGTCCTGTCGTGTAGACCACTTTAGGTGGTTTCGACTCGTGTGCAAGTGTAGTCACTACCTGAGTACTTGCATTCTATTTAGAGGCATACGACATGGCATATTTTATGAGCATGTTTTCTATATTATGTGTATATTCTATTTTTCTGGGAGGTATACTGTTCGAAAAACTTTGTTTTTACCCACTCACGCTTTCTGTTTTGCGCCCCTCCAGTTCTCGGCATATCTGACAGATTATCACCAGTGTAGGACCACCTTTGGGTGTGTTTATTTAGTGTTGTTTCTCCCAGACTGCACTAGGTCTTCCGTGTTATTTACTTTGTGTATAGCTAGGTTTGTATTTATTCGTACTTTTATTATTATTCTTAGCTTCCGCATTGTGCACATGGTTACGTCACTTCCACGTGACGGCCAGTATGCCCTAATCTCGGTCGGGGTGTTTATTGTAACATCCCACATCCACGAGCCCTTTTGGGAGCTCACTGGCTTCGAATTCCGTAGGAACTCCGAAGTTAATCGAGAAGGGGGCGAGAGCAATTCCATGATGGGTGACCCACTGGGAAGTTCGGACAATATCGTGCTACAGTGGTGGAGCGGGCCCGGGACGTACCATGATCGATCCGCCCCGGGCCGGGATGTGACATATTGTCTTTTAAGATATAGAATGAAGAGAAGAGTGGTTTCTTCAAGGTCTTTTATTCCTTATGCTTTGACTTCGGATTATAGATTGTTAAATCCTGGAAGATGGACGCCTACCGAACTACAAGCACAAGAGTCAGGACAAAATTCTGTCTTTAAGACATTGTATTTATGCAAGCCTCAATCTCTAAGTTTGTCAGTTTTTCTAACTATTTCTCTAGTTGTTTATGTTAATCTTATATATAATTGTTGTAGTGAATTTATTTATTATTATCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

745

Amino Acids

85.39

Weight (kDa)

9.45

Isoelectric Point (pI)

49.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 117
Acc36I ACCTGC 3 cut(s) 510, 1102, 1151
AccB1I GGYRCC 1 cut(s) 642
AccB7I CCANNNNNTGG 1 cut(s) 793
AccBSI CCGCTC 1 cut(s) 1911
AccI GTMKAC 3 cut(s) 103, 1332, 1472
AccII CGCG 4 cut(s) 768, 779, 1109, 1297
AciI CCGC 9 cut(s) 317, 774, 1103, 1167, 1209, 1295, 1690, 1911, 1938
AclI AACGTT 3 cut(s) 31, 312, 1018
AclWI GGATC 5 cut(s) 327, 515, 1224, 1237, 1929
AcoI YGGCCR 4 cut(s) 526, 654, 784, 1726
AcsI RAATTY 6 cut(s) 173, 364, 900, 1808, 2101, 2213
AcvI CACGTG 2 cut(s) 759, 1721
AcyI GRCGYC 3 cut(s) 643, 738, 2066
AfaI GTAC 5 cut(s) 816, 1258, 1384, 1666, 1925
AflIII ACRYGT 1 cut(s) 1193
AgsI TTSAA 4 cut(s) 369, 490, 575, 2004
AhdI GACNNNNNGTC 1 cut(s) 1962
AjiI CACGTC 1 cut(s) 408
AjnI CCWGG 4 cut(s) 751, 1053, 1121, 2053
AleI CACNNNNGTG 1 cut(s) 453
AluBI AGCT 5 cut(s) 355, 1135, 1646, 1686, 1795
AluI AGCT 5 cut(s) 355, 1135, 1646, 1686, 1795
Alw21I GWGCWC 6 cut(s) 349, 1137, 1165, 1246, 1701, 1797
Alw26I GTCTC 2 cut(s) 253, 929
Alw44I GTGCAC 2 cut(s) 1242, 1697
AlwI GGATC 5 cut(s) 327, 515, 1224, 1237, 1929
Ama87I CYCGRG 5 cut(s) 415, 473, 944, 1916, 1942
AoxI GGCC 7 cut(s) 526, 654, 784, 795, 1726, 1913, 1945
ApaI GGGCCC 1 cut(s) 1917
ApaLI GTGCAC 2 cut(s) 1242, 1697
ApeKI GCWGC 1 cut(s) 1100
ApoI RAATTY 6 cut(s) 173, 364, 900, 1808, 2101, 2213
AspLEI GCGC 6 cut(s) 645, 768, 779, 894, 1111, 1522
AspS9I GGNCC 7 cut(s) 193, 460, 796, 1566, 1913, 1914, 1945
AsuC2I CCSGG 8 cut(s) 546, 626, 1152, 1917, 1918, 1943, 1944, 1949
AsuHPI GGTGA 7 cut(s) 268, 467, 944, 1194, 1301, 1547, 1877
AsuII TTCGAA 2 cut(s) 1480, 1806
AvaI CYCGRG 5 cut(s) 415, 473, 944, 1916, 1942
AvaII GGWCC 3 cut(s) 193, 460, 1566
BaeGI GKGCMC 4 cut(s) 1183, 1246, 1701, 1917
BalI TGGCCA 1 cut(s) 786
BamHI GGATCC 1 cut(s) 1229
BanI GGYRCC 1 cut(s) 642
BanII GRGCYC 4 cut(s) 1137, 1785, 1797, 1917
BauI CACGAG 3 cut(s) 348, 1355, 1778
BbrPI CACGTG 2 cut(s) 759, 1721
BbsI GAAGAC 1 cut(s) 1611
Bbv12I GWGCWC 6 cut(s) 349, 1137, 1165, 1246, 1701, 1797
BbvI GCAGC 1 cut(s) 1087
BccI CCATC 2 cut(s) 1855, 2055
BceAI ACGGC 4 cut(s) 656, 725, 741, 1741
BcgI CGANNNNNNTGC 2 cut(s) 1341, 1375
BciT130I CCWGG 4 cut(s) 753, 1055, 1123, 2055
BcnI CCSGG 8 cut(s) 546, 626, 1152, 1917, 1918, 1943, 1944, 1949
BcoDI GTCTC 2 cut(s) 253, 929
BfaI CTAG 3 cut(s) 1614, 1647, 2174
BfmI CTRYAG 1 cut(s) 1898
BfoI RGCGCY 1 cut(s) 646
BfuAI ACCTGC 3 cut(s) 510, 1102, 1151
BisI GCNGC 2 cut(s) 775, 1101
BlsI GCNGC 2 cut(s) 776, 1102
BmcAI AGTACT 1 cut(s) 1384
Bme18I GGWCC 3 cut(s) 193, 460, 1566
BmeRI GACNNNNNGTC 1 cut(s) 1962
BmeT110I CYCGRG 5 cut(s) 415, 473, 944, 1916, 1942
BmgBI CACGTC 1 cut(s) 408
BmgT120I GGNCC 7 cut(s) 193, 460, 796, 1566, 1913, 1914, 1945
BmiI GGNNCC 5 cut(s) 394, 644, 1231, 1277, 1915
BmrI ACTGGG 2 cut(s) 1312, 1883
BmuI ACTGGG 2 cut(s) 1312, 1883
BpiI GAAGAC 1 cut(s) 1611
BpmI CTGGAG 1 cut(s) 1511
Bpu14I TTCGAA 2 cut(s) 1480, 1806
BpuEI CTTGAG 2 cut(s) 115, 128
BpuMI CCSGG 8 cut(s) 546, 626, 1152, 1917, 1918, 1943, 1944, 1949
Bsa29I ATCGAT 1 cut(s) 1933
BsaAI YACGTR 2 cut(s) 759, 1721
BsaHI GRCGYC 3 cut(s) 643, 738, 2066
BsaI GGTCTC 1 cut(s) 929
BsaJI CCNNGG 7 cut(s) 451, 792, 945, 1150, 1916, 1941, 1942
BsaXI ACNNNNNCTCC 2 cut(s) 523, 553
Bse1I ACTGG 6 cut(s) 1318, 1528, 1558, 1729, 1804, 1878
Bse3DI GCAATG 1 cut(s) 303
BseBI CCWGG 4 cut(s) 753, 1055, 1123, 2055
BseCI ATCGAT 1 cut(s) 1933
BseDI CCNNGG 7 cut(s) 451, 792, 945, 1150, 1916, 1941, 1942
BseGI GGATG 4 cut(s) 206, 1766, 1773, 1957
BseMI GCAATG 1 cut(s) 303
BseMII CTCAG 1 cut(s) 1370
BseNI ACTGG 6 cut(s) 1318, 1528, 1558, 1729, 1804, 1878
BseRI GAGGAG 1 cut(s) 253
BseSI GKGCMC 4 cut(s) 1183, 1246, 1701, 1917
BseXI GCAGC 1 cut(s) 1087
BsgI GTGCAG 2 cut(s) 1129, 1594
Bsh1236I CGCG 4 cut(s) 768, 779, 1109, 1297
Bsh1285I CGRYCG 1 cut(s) 1749
BshFI GGCC 7 cut(s) 528, 656, 786, 797, 1728, 1915, 1947
BshNI GGYRCC 1 cut(s) 642
BshVI ATCGAT 1 cut(s) 1933
BsiEI CGRYCG 1 cut(s) 1749
BsiHKAI GWGCWC 6 cut(s) 349, 1137, 1165, 1246, 1701, 1797
BsiHKCI CYCGRG 5 cut(s) 415, 473, 944, 1916, 1942
BslFI GGGAC 2 cut(s) 222, 1933
BsmAI GTCTC 2 cut(s) 253, 929
BsmFI GGGAC 2 cut(s) 222, 1933
BsmI GAATGC 1 cut(s) 1389
BsnI GGCC 7 cut(s) 528, 656, 786, 797, 1728, 1915, 1947
Bso31I GGTCTC 1 cut(s) 929
BsoBI CYCGRG 5 cut(s) 415, 473, 944, 1916, 1942
Bsp119I TTCGAA 2 cut(s) 1480, 1806
Bsp120I GGGCCC 1 cut(s) 1913
Bsp1286I GDGCHC 9 cut(s) 349, 1137, 1165, 1183, 1246, 1701, 1785, 1797, 1917
Bsp143I GATC 5 cut(s) 319, 507, 1229, 1930, 1934
BspACI CCGC 9 cut(s) 317, 774, 1103, 1167, 1209, 1295, 1690, 1911, 1938
BspANI GGCC 7 cut(s) 528, 656, 786, 797, 1728, 1915, 1947
BspCNI CTCAG 1 cut(s) 1371
BspDI ATCGAT 1 cut(s) 1933
BspFNI CGCG 4 cut(s) 768, 779, 1109, 1297
BspLI GGNNCC 5 cut(s) 394, 644, 1231, 1277, 1915
BspMI ACCTGC 3 cut(s) 510, 1102, 1151
BspPI GGATC 5 cut(s) 327, 515, 1224, 1237, 1929
BspT104I TTCGAA 2 cut(s) 1480, 1806
BspT107I GGYRCC 1 cut(s) 642
BspTNI GGTCTC 1 cut(s) 929
BsrBI CCGCTC 1 cut(s) 1911
BsrDI GCAATG 1 cut(s) 303
BsrI ACTGG 6 cut(s) 1318, 1528, 1558, 1729, 1804, 1878
BssECI CCNNGG 7 cut(s) 451, 792, 945, 1150, 1916, 1941, 1942
BssMI GATC 5 cut(s) 319, 507, 1229, 1930, 1934
BssNAI GTATAC 2 cut(s) 104, 1473
BssNI GRCGYC 3 cut(s) 643, 738, 2066
BssSI CACGAG 3 cut(s) 348, 1355, 1778
BssT1I CCWWGG 2 cut(s) 451, 792
Bst1107I GTATAC 2 cut(s) 104, 1473
Bst2BI CACGAG 3 cut(s) 348, 1355, 1778
Bst2UI CCWGG 4 cut(s) 753, 1055, 1123, 2055
Bst4CI ACNGT 5 cut(s) 101, 819, 1185, 1477, 1902
Bst6I CTCTTC 5 cut(s) 94, 273, 278, 1979, 1984
BstACI GRCGYC 3 cut(s) 643, 738, 2066
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstBAI YACGTR 2 cut(s) 759, 1721
BstBI TTCGAA 2 cut(s) 1480, 1806
BstC8I GCNNGC 3 cut(s) 764, 1913, 2132
BstDEI CTNAG 5 cut(s) 359, 464, 1379, 1682, 2144
BstEII GGTNACC 2 cut(s) 1289, 1865
BstENI CCTNNNNNAGG 1 cut(s) 455
BstF5I GGATG 4 cut(s) 206, 1766, 1773, 1957
BstFNI CGCG 4 cut(s) 768, 779, 1109, 1297
BstH2I RGCGCY 1 cut(s) 646
BstHHI GCGC 6 cut(s) 645, 768, 779, 894, 1111, 1522
BstKTI GATC 5 cut(s) 322, 510, 1232, 1933, 1937
BstMAI GTCTC 2 cut(s) 253, 929
BstMBI GATC 5 cut(s) 319, 507, 1229, 1930, 1934
BstMCI CGRYCG 1 cut(s) 1749
BstMWI GCNNNNNNNGC 7 cut(s) 314, 525, 774, 783, 1106, 1132, 1217
BstNI CCWGG 4 cut(s) 753, 1055, 1123, 2055
BstNSI RCATGY 3 cut(s) 1197, 1220, 1433
BstPI GGTNACC 2 cut(s) 1289, 1865
BstSFI CTRYAG 1 cut(s) 1898
BstSLI GKGCMC 4 cut(s) 1183, 1246, 1701, 1917
BstUI CGCG 4 cut(s) 768, 779, 1109, 1297
BstV1I GCAGC 1 cut(s) 1087
BstV2I GAAGAC 1 cut(s) 1611
BstX2I RGATCY 1 cut(s) 1229
BstYI RGATCY 1 cut(s) 1229
BstZ17I GTATAC 2 cut(s) 104, 1473
Bsu15I ATCGAT 1 cut(s) 1933
BsuRI GGCC 7 cut(s) 528, 656, 786, 797, 1728, 1915, 1947
BsuTUI ATCGAT 1 cut(s) 1933
BtrI CACGTC 1 cut(s) 408
BtsCI GGATG 4 cut(s) 206, 1766, 1773, 1957
BtsIMutI CAGTG 4 cut(s) 1565, 1797, 1871, 1907
BveI ACCTGC 3 cut(s) 510, 1102, 1151
Cac8I GCNNGC 3 cut(s) 764, 1913, 2132
CfoI GCGC 6 cut(s) 645, 768, 779, 894, 1111, 1522
Cfr13I GGNCC 7 cut(s) 193, 460, 796, 1566, 1913, 1914, 1945
Cfr9I CCCGGG 2 cut(s) 1916, 1942
ClaI ATCGAT 1 cut(s) 1933
CseI GACGC 3 cut(s) 746, 1115, 2074
Csp6I GTAC 5 cut(s) 815, 1257, 1383, 1665, 1924
CviQI GTAC 5 cut(s) 815, 1257, 1383, 1665, 1924
DdeI CTNAG 5 cut(s) 359, 464, 1379, 1682, 2144
DinI GGCGCC 1 cut(s) 644
DpnI GATC 5 cut(s) 321, 509, 1231, 1932, 1936
DpnII GATC 5 cut(s) 319, 507, 1229, 1930, 1934
DraI TTTAAA 2 cut(s) 837, 898
DriI GACNNNNNGTC 1 cut(s) 1962
EaeI YGGCCR 4 cut(s) 526, 654, 784, 1726
Eam1104I CTCTTC 5 cut(s) 94, 273, 278, 1979, 1984
Eam1105I GACNNNNNGTC 1 cut(s) 1962
EarI CTCTTC 5 cut(s) 94, 273, 278, 1979, 1984
EciI GGCGGA 1 cut(s) 1927
Ecl136II GAGCTC 2 cut(s) 1135, 1795
Eco130I CCWWGG 2 cut(s) 451, 792
Eco24I GRGCYC 4 cut(s) 1137, 1785, 1797, 1917
Eco31I GGTCTC 1 cut(s) 929
Eco47I GGWCC 3 cut(s) 193, 460, 1566
Eco53kI GAGCTC 2 cut(s) 1135, 1795
Eco72I CACGTG 2 cut(s) 759, 1721
Eco88I CYCGRG 5 cut(s) 415, 473, 944, 1916, 1942
Eco91I GGTNACC 2 cut(s) 1289, 1865
EcoICRI GAGCTC 2 cut(s) 1135, 1795
EcoNI CCTNNNNNAGG 1 cut(s) 455
EcoO109I RGGNCCY 1 cut(s) 460
EcoO65I GGTNACC 2 cut(s) 1289, 1865
EcoRI GAATTC 2 cut(s) 364, 1808
EcoRII CCWGG 4 cut(s) 751, 1053, 1121, 2053
EcoT14I CCWWGG 2 cut(s) 451, 792
EcoT22I ATGCAT 3 cut(s) 40, 1044, 1069
EcoT38I GRGCYC 4 cut(s) 1137, 1785, 1797, 1917
EgeI GGCGCC 1 cut(s) 644
EheI GGCGCC 1 cut(s) 644
ErhI CCWWGG 2 cut(s) 451, 792
FaqI GGGAC 2 cut(s) 222, 1933
FauI CCCGC 4 cut(s) 1174, 1216, 1302, 1904
FauNDI CATATG 1 cut(s) 1089
FblI GTMKAC 3 cut(s) 103, 1332, 1472
Fnu4HI GCNGC 2 cut(s) 775, 1101
FokI GGATG 4 cut(s) 193, 1753, 1760, 1964
FriOI GRGCYC 4 cut(s) 1137, 1785, 1797, 1917
Fsp4HI GCNGC 2 cut(s) 775, 1101
FspBI CTAG 3 cut(s) 1614, 1647, 2174
GlaI GCGC 6 cut(s) 644, 767, 778, 893, 1110, 1521
GluI GCNGC 2 cut(s) 775, 1101
GsuI CTGGAG 1 cut(s) 1511
HaeII RGCGCY 1 cut(s) 646
HaeIII GGCC 7 cut(s) 528, 656, 786, 797, 1728, 1915, 1947
HgaI GACGC 3 cut(s) 746, 1115, 2074
HhaI GCGC 6 cut(s) 645, 768, 779, 894, 1111, 1522
Hin1I GRCGYC 3 cut(s) 643, 738, 2066
Hin6I GCGC 6 cut(s) 643, 766, 777, 892, 1109, 1520
HinP1I GCGC 6 cut(s) 643, 766, 777, 892, 1109, 1520
HincII GTYRAC 2 cut(s) 690, 732
HindII GTYRAC 2 cut(s) 690, 732
HinfI GANTC 5 cut(s) 13, 695, 1281, 1353, 2090
HpaI GTTAAC 2 cut(s) 690, 732
HphI GGTGA 7 cut(s) 268, 467, 944, 1194, 1301, 1547, 1877
Hpy166II GTNNAC 9 cut(s) 104, 690, 732, 815, 1202, 1244, 1333, 1473, 1699
Hpy188I TCNGA 7 cut(s) 723, 825, 1280, 1545, 1825, 1885, 2035
Hpy188III TCNNGA 7 cut(s) 132, 350, 505, 511, 944, 1835, 2094
Hpy8I GTNNAC 9 cut(s) 104, 690, 732, 815, 1202, 1244, 1333, 1473, 1699
Hpy99I CGWCG 3 cut(s) 412, 506, 642
HpyAV CCTTC 5 cut(s) 264, 462, 484, 1198, 1832
HpyCH4III ACNGT 5 cut(s) 101, 819, 1185, 1477, 1902
HpyCH4IV ACGT 8 cut(s) 31, 312, 407, 758, 1018, 1709, 1720, 1922
HpyF10VI GCNNNNNNNGC 7 cut(s) 314, 525, 774, 783, 1106, 1132, 1217
HpyF3I CTNAG 5 cut(s) 359, 464, 1379, 1682, 2144
HpySE526I ACGT 8 cut(s) 31, 312, 407, 758, 1018, 1709, 1720, 1922
Hsp92I GRCGYC 3 cut(s) 643, 738, 2066
HspAI GCGC 6 cut(s) 643, 766, 777, 892, 1109, 1520
KasI GGCGCC 1 cut(s) 642
KspAI GTTAAC 2 cut(s) 690, 732
Kzo9I GATC 5 cut(s) 319, 507, 1229, 1930, 1934
LmnI GCTCC 3 cut(s) 1168, 1792, 1908
Lsp1109I GCAGC 1 cut(s) 1087
MaeI CTAG 3 cut(s) 1614, 1647, 2174
MaeII ACGT 8 cut(s) 31, 312, 407, 758, 1018, 1709, 1720, 1922
MaeIII GTNAC 8 cut(s) 1289, 1370, 1705, 1710, 1721, 1762, 1865, 1954
MalI GATC 5 cut(s) 321, 509, 1231, 1932, 1936
MbiI CCGCTC 1 cut(s) 1911
MboI GATC 5 cut(s) 319, 507, 1229, 1930, 1934
MboII GAAGA 9 cut(s) 81, 260, 265, 674, 1611, 1992, 1996, 2001, 2070
MflI RGATCY 1 cut(s) 1229
MhlI GDGCHC 9 cut(s) 349, 1137, 1165, 1183, 1246, 1701, 1785, 1797, 1917
MlsI TGGCCA 1 cut(s) 786
MluNI TGGCCA 1 cut(s) 786
Mly113I GGCGCC 1 cut(s) 643
MlyI GAGTC 4 cut(s) 22, 1275, 1347, 2099
MmeI TCCRAC 1 cut(s) 1303
Mox20I TGGCCA 1 cut(s) 786
Mph1103I ATGCAT 3 cut(s) 40, 1044, 1069
MscI TGGCCA 1 cut(s) 786
MslI CAYNNNNRTG 3 cut(s) 342, 453, 930
Msp20I TGGCCA 1 cut(s) 786
Mva1269I GAATGC 1 cut(s) 1389
MvaI CCWGG 4 cut(s) 753, 1055, 1123, 2055
MvnI CGCG 4 cut(s) 768, 779, 1109, 1297
MwoI GCNNNNNNNGC 7 cut(s) 314, 525, 774, 783, 1106, 1132, 1217
NarI GGCGCC 1 cut(s) 643
NciI CCSGG 8 cut(s) 546, 626, 1152, 1917, 1918, 1943, 1944, 1949
NdeI CATATG 1 cut(s) 1089
NdeII GATC 5 cut(s) 319, 507, 1229, 1930, 1934
NlaIV GGNNCC 5 cut(s) 394, 644, 1231, 1277, 1915
NmeAIII GCCGAG 1 cut(s) 1514
NmuCI GTSAC 6 cut(s) 1289, 1370, 1710, 1721, 1865, 1954
NsiI ATGCAT 3 cut(s) 40, 1044, 1069
NspI RCATGY 3 cut(s) 1197, 1220, 1433
NspV TTCGAA 2 cut(s) 1480, 1806
OliI CACNNNNGTG 1 cut(s) 453
PciI ACATGT 1 cut(s) 1193
PcsI WCGNNNNNNNCGW 2 cut(s) 413, 507
PctI GAATGC 1 cut(s) 1389
PfeI GAWTC 1 cut(s) 695
PflFI GACNNNGTC 1 cut(s) 740
PflMI CCANNNNNTGG 1 cut(s) 793
PfoI TCCNGGA 1 cut(s) 2053
PkrI GCNGC 2 cut(s) 776, 1102
PleI GAGTC 4 cut(s) 21, 1275, 1347, 2098
PluTI GGCGCC 1 cut(s) 646
PmaCI CACGTG 2 cut(s) 759, 1721
PmlI CACGTG 2 cut(s) 759, 1721
PpsI GAGTC 4 cut(s) 21, 1275, 1347, 2098
Ppu21I YACGTR 2 cut(s) 759, 1721
PpuMI RGGWCCY 1 cut(s) 460
PscI ACATGT 1 cut(s) 1193
PsiI TTATAA 1 cut(s) 117
Psp124BI GAGCTC 2 cut(s) 1137, 1797
Psp1406I AACGTT 3 cut(s) 31, 312, 1018
Psp5II RGGWCCY 1 cut(s) 460
Psp6I CCWGG 4 cut(s) 751, 1053, 1121, 2053
PspCI CACGTG 2 cut(s) 759, 1721
PspEI GGTNACC 2 cut(s) 1289, 1865
PspGI CCWGG 4 cut(s) 751, 1053, 1121, 2053
PspN4I GGNNCC 5 cut(s) 394, 644, 1231, 1277, 1915
PspOMI GGGCCC 1 cut(s) 1913
PspPI GGNCC 7 cut(s) 193, 460, 796, 1566, 1913, 1914, 1945
PspPPI RGGWCCY 1 cut(s) 460
PsuI RGATCY 1 cut(s) 1229
PsyI GACNNNGTC 1 cut(s) 740
RsaI GTAC 5 cut(s) 816, 1258, 1384, 1666, 1925
RsaNI GTAC 5 cut(s) 815, 1257, 1383, 1665, 1924
RseI CAYNNNNRTG 3 cut(s) 342, 453, 930
SacI GAGCTC 2 cut(s) 1137, 1797
SatI GCNGC 2 cut(s) 775, 1101
Sau3AI GATC 5 cut(s) 319, 507, 1229, 1930, 1934
Sau96I GGNCC 7 cut(s) 193, 460, 796, 1566, 1913, 1914, 1945
ScaI AGTACT 1 cut(s) 1384
SchI GAGTC 4 cut(s) 22, 1275, 1347, 2099
SduI GDGCHC 9 cut(s) 349, 1137, 1165, 1183, 1246, 1701, 1785, 1797, 1917
SfcI CTRYAG 1 cut(s) 1898
SfoI GGCGCC 1 cut(s) 644
SfuI TTCGAA 2 cut(s) 1480, 1806
SinI GGWCC 3 cut(s) 193, 460, 1566
SmaI CCCGGG 2 cut(s) 1918, 1944
SmiMI CAYNNNNRTG 3 cut(s) 342, 453, 930
SmlI CTYRAG 2 cut(s) 107, 130
SmoI CTYRAG 2 cut(s) 107, 130
SsiI CCGC 9 cut(s) 317, 774, 1103, 1167, 1209, 1295, 1690, 1911, 1938
SspDI GGCGCC 1 cut(s) 642
SspI AATATT 2 cut(s) 675, 717
SspMI CTAG 3 cut(s) 1614, 1647, 2174
SstI GAGCTC 2 cut(s) 1137, 1797
StyI CCWWGG 2 cut(s) 451, 792
TaaI ACNGT 5 cut(s) 101, 819, 1185, 1477, 1902
TaiI ACGT 8 cut(s) 34, 315, 410, 761, 1021, 1712, 1723, 1925
TaqI TCGA 7 cut(s) 322, 410, 1351, 1480, 1806, 1834, 1933
TaqII GACCGA 1 cut(s) 1735
TatI WGTACW 1 cut(s) 1382
TauI GCSGC 1 cut(s) 777
TfiI GAWTC 1 cut(s) 695
TscAI CASTG 4 cut(s) 1565, 1804, 1878, 1907
TseFI GTSAC 6 cut(s) 1289, 1370, 1710, 1721, 1865, 1954
TseI GCWGC 1 cut(s) 1100
Tsp45I GTSAC 6 cut(s) 1289, 1370, 1710, 1721, 1865, 1954
TspDTI ATGAA 4 cut(s) 17, 431, 1023, 1997
TspGWI ACGGA 7 cut(s) 302, 684, 707, 726, 961, 1612, 1802
TspMI CCCGGG 2 cut(s) 1916, 1942
TspRI CASTG 4 cut(s) 1565, 1804, 1878, 1907
Tth111I GACNNNGTC 1 cut(s) 740
Van91I CCANNNNNTGG 1 cut(s) 793
VneI GTGCAC 2 cut(s) 1242, 1697
VpaK11BI GGWCC 3 cut(s) 193, 460, 1566
XagI CCTNNNNNAGG 1 cut(s) 455
XapI RAATTY 6 cut(s) 173, 364, 900, 1808, 2101, 2213
XceI RCATGY 3 cut(s) 1197, 1220, 1433
XmaI CCCGGG 2 cut(s) 1916, 1942
XmiI GTMKAC 3 cut(s) 103, 1332, 1472
XspI CTAG 3 cut(s) 1614, 1647, 2174
ZrmI AGTACT 1 cut(s) 1384
Zsp2I ATGCAT 3 cut(s) 40, 1044, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.