F-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 106 - 380 | 2.5e-47 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 354 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 816 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccII | CGCG | 1 cut(s) | 519 |
| AciI | CCGC | 1 cut(s) | 123 |
| AclWI | GGATC | 1 cut(s) | 702 |
| AcsI | RAATTY | 4 cut(s) | 372, 655, 794, 1181 |
| AcuI | CTGAAG | 1 cut(s) | 51 |
| AcyI | GRCGYC | 1 cut(s) | 1049 |
| AdeI | CACNNNGTG | 1 cut(s) | 903 |
| AfaI | GTAC | 3 cut(s) | 20, 504, 731 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 244, 293, 632 |
| AgsI | TTSAA | 4 cut(s) | 293, 301, 600, 1226 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 909, 941 |
| AluBI | AGCT | 6 cut(s) | 37, 231, 283, 493, 860, 993 |
| AluI | AGCT | 6 cut(s) | 37, 231, 283, 493, 860, 993 |
| Alw21I | GWGCWC | 1 cut(s) | 495 |
| Alw26I | GTCTC | 1 cut(s) | 464 |
| AlwI | GGATC | 1 cut(s) | 702 |
| Ama87I | CYCGRG | 1 cut(s) | 1167 |
| AoxI | GGCC | 1 cut(s) | 263 |
| ApeKI | GCWGC | 2 cut(s) | 930, 990 |
| ApoI | RAATTY | 4 cut(s) | 372, 655, 794, 1181 |
| AspS9I | GGNCC | 4 cut(s) | 217, 263, 712, 818 |
| AsuC2I | CCSGG | 1 cut(s) | 627 |
| AsuHPI | GGTGA | 3 cut(s) | 436, 647, 1156 |
| AvaI | CYCGRG | 1 cut(s) | 1167 |
| AvaII | GGWCC | 3 cut(s) | 217, 712, 818 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 2 cut(s) | 495, 563 |
| BauI | CACGAG | 1 cut(s) | 461 |
| Bbv12I | GWGCWC | 1 cut(s) | 495 |
| BbvI | GCAGC | 2 cut(s) | 917, 1002 |
| BccI | CCATC | 2 cut(s) | 411, 1148 |
| BcnI | CCSGG | 1 cut(s) | 627 |
| BcoDI | GTCTC | 1 cut(s) | 464 |
| BfaI | CTAG | 1 cut(s) | 228 |
| BfmI | CTRYAG | 1 cut(s) | 931 |
| BisI | GCNGC | 3 cut(s) | 123, 931, 991 |
| BlsI | GCNGC | 3 cut(s) | 124, 932, 992 |
| Bme1390I | CCNGG | 1 cut(s) | 627 |
| Bme18I | GGWCC | 3 cut(s) | 217, 712, 818 |
| BmeT110I | CYCGRG | 1 cut(s) | 1167 |
| BmgT120I | GGNCC | 4 cut(s) | 217, 263, 712, 818 |
| BmiI | GGNNCC | 3 cut(s) | 6, 249, 948 |
| BmrFI | CCNGG | 1 cut(s) | 627 |
| BmsI | GCATC | 1 cut(s) | 475 |
| BpmI | CTGGAG | 2 cut(s) | 221, 347 |
| BpuMI | CCSGG | 1 cut(s) | 627 |
| BsaHI | GRCGYC | 1 cut(s) | 1049 |
| BsaJI | CCNNGG | 2 cut(s) | 273, 626 |
| BsaWI | WCCGGW | 1 cut(s) | 244 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 244, 293, 632 |
| Bse118I | RCCGGY | 1 cut(s) | 219 |
| Bse1I | ACTGG | 2 cut(s) | 17, 715 |
| BseDI | CCNNGG | 2 cut(s) | 273, 626 |
| BseGI | GGATG | 3 cut(s) | 422, 466, 1159 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 244, 293, 632 |
| BseNI | ACTGG | 2 cut(s) | 17, 715 |
| BseRI | GAGGAG | 1 cut(s) | 258 |
| BseXI | GCAGC | 2 cut(s) | 917, 1002 |
| BseYI | CCCAGC | 2 cut(s) | 631, 860 |
| BsgI | GTGCAG | 1 cut(s) | 117 |
| Bsh1236I | CGCG | 1 cut(s) | 519 |
| BshFI | GGCC | 1 cut(s) | 265 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 1 cut(s) | 495 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1167 |
| BsiSI | CCGG | 3 cut(s) | 220, 245, 626 |
| BsiWI | CGTACG | 1 cut(s) | 18 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 244, 293, 632 |
| BsmAI | GTCTC | 1 cut(s) | 464 |
| BsnI | GGCC | 1 cut(s) | 265 |
| BsoBI | CYCGRG | 1 cut(s) | 1167 |
| Bsp1286I | GDGCHC | 2 cut(s) | 495, 563 |
| Bsp1407I | TGTACA | 1 cut(s) | 502 |
| Bsp143I | GATC | 3 cut(s) | 116, 345, 694 |
| BspACI | CCGC | 1 cut(s) | 123 |
| BspANI | GGCC | 1 cut(s) | 265 |
| BspFNI | CGCG | 1 cut(s) | 519 |
| BspHI | TCATGA | 1 cut(s) | 1092 |
| BspLI | GGNNCC | 3 cut(s) | 6, 249, 948 |
| BspMAI | CTGCAG | 1 cut(s) | 935 |
| BspPI | GGATC | 1 cut(s) | 702 |
| BspQI | GCTCTTC | 1 cut(s) | 27 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BsrFI | RCCGGY | 1 cut(s) | 219 |
| BsrGI | TGTACA | 1 cut(s) | 502 |
| BsrI | ACTGG | 2 cut(s) | 17, 715 |
| BssAI | RCCGGY | 1 cut(s) | 219 |
| BssECI | CCNNGG | 2 cut(s) | 273, 626 |
| BssMI | GATC | 3 cut(s) | 116, 345, 694 |
| BssNI | GRCGYC | 1 cut(s) | 1049 |
| BssSI | CACGAG | 1 cut(s) | 461 |
| Bst2BI | CACGAG | 1 cut(s) | 461 |
| Bst4CI | ACNGT | 4 cut(s) | 130, 323, 507, 669 |
| Bst6I | CTCTTC | 1 cut(s) | 27 |
| BstACI | GRCGYC | 1 cut(s) | 1049 |
| BstAUI | TGTACA | 1 cut(s) | 502 |
| BstC8I | GCNNGC | 1 cut(s) | 1073 |
| BstDEI | CTNAG | 1 cut(s) | 1016 |
| BstDSI | CCRYGG | 1 cut(s) | 273 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 291 |
| BstF5I | GGATG | 3 cut(s) | 422, 466, 1159 |
| BstFNI | CGCG | 1 cut(s) | 519 |
| BstKTI | GATC | 3 cut(s) | 119, 348, 697 |
| BstMAI | GTCTC | 1 cut(s) | 464 |
| BstMBI | GATC | 3 cut(s) | 116, 345, 694 |
| BstSCI | CCNGG | 1 cut(s) | 625 |
| BstSFI | CTRYAG | 1 cut(s) | 931 |
| BstUI | CGCG | 1 cut(s) | 519 |
| BstV1I | GCAGC | 2 cut(s) | 917, 1002 |
| BstX2I | RGATCY | 1 cut(s) | 694 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 740 |
| BstYI | RGATCY | 1 cut(s) | 694 |
| BsuRI | GGCC | 1 cut(s) | 265 |
| BtgI | CCRYGG | 1 cut(s) | 273 |
| BtsCI | GGATG | 3 cut(s) | 422, 466, 1159 |
| BtsIMutI | CAGTG | 1 cut(s) | 126 |
| Cac8I | GCNNGC | 1 cut(s) | 1073 |
| CciI | TCATGA | 1 cut(s) | 1092 |
| Cfr10I | RCCGGY | 1 cut(s) | 219 |
| Cfr13I | GGNCC | 4 cut(s) | 217, 263, 712, 818 |
| CseI | GACGC | 1 cut(s) | 1038 |
| Csp6I | GTAC | 3 cut(s) | 19, 503, 730 |
| CviAII | CATG | 6 cut(s) | 43, 111, 397, 479, 589, 1093 |
| CviQI | GTAC | 3 cut(s) | 19, 503, 730 |
| DdeI | CTNAG | 1 cut(s) | 1016 |
| DpnI | GATC | 3 cut(s) | 118, 347, 696 |
| DpnII | GATC | 3 cut(s) | 116, 345, 694 |
| DraI | TTTAAA | 2 cut(s) | 474, 1143 |
| DraIII | CACNNNGTG | 1 cut(s) | 903 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 816 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 816 |
| Eam1104I | CTCTTC | 1 cut(s) | 27 |
| EarI | CTCTTC | 1 cut(s) | 27 |
| Ecl136II | GAGCTC | 1 cut(s) | 493 |
| Eco24I | GRGCYC | 2 cut(s) | 495, 563 |
| Eco47I | GGWCC | 3 cut(s) | 217, 712, 818 |
| Eco53kI | GAGCTC | 1 cut(s) | 493 |
| Eco57I | CTGAAG | 1 cut(s) | 51 |
| Eco88I | CYCGRG | 1 cut(s) | 1167 |
| EcoICRI | GAGCTC | 1 cut(s) | 493 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 291 |
| EcoO109I | RGGNCCY | 1 cut(s) | 818 |
| EcoT38I | GRGCYC | 2 cut(s) | 495, 563 |
| FaeI | CATG | 6 cut(s) | 46, 114, 400, 482, 592, 1096 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 533, 565 |
| FatI | CATG | 6 cut(s) | 42, 110, 396, 478, 588, 1092 |
| Fnu4HI | GCNGC | 3 cut(s) | 123, 931, 991 |
| FokI | GGATG | 3 cut(s) | 429, 453, 1166 |
| FriOI | GRGCYC | 2 cut(s) | 495, 563 |
| Fsp4HI | GCNGC | 3 cut(s) | 123, 931, 991 |
| FspBI | CTAG | 1 cut(s) | 228 |
| GluI | GCNGC | 3 cut(s) | 123, 931, 991 |
| GsaI | CCCAGC | 2 cut(s) | 635, 864 |
| GsuI | CTGGAG | 2 cut(s) | 221, 347 |
| HaeIII | GGCC | 1 cut(s) | 265 |
| HapII | CCGG | 3 cut(s) | 220, 245, 626 |
| HgaI | GACGC | 1 cut(s) | 1038 |
| Hin1I | GRCGYC | 1 cut(s) | 1049 |
| Hin1II | CATG | 6 cut(s) | 46, 114, 400, 482, 592, 1096 |
| HinfI | GANTC | 8 cut(s) | 68, 241, 457, 854, 977, 1199, 1209, 1222 |
| HpaII | CCGG | 3 cut(s) | 220, 245, 626 |
| HphI | GGTGA | 3 cut(s) | 436, 647, 1156 |
| Hpy166II | GTNNAC | 1 cut(s) | 885 |
| Hpy188I | TCNGA | 4 cut(s) | 436, 577, 982, 1054 |
| Hpy188III | TCNNGA | 8 cut(s) | 29, 238, 290, 326, 800, 1062, 1093, 1203 |
| Hpy8I | GTNNAC | 1 cut(s) | 885 |
| HpyAV | CCTTC | 3 cut(s) | 287, 573, 1045 |
| HpyCH4III | ACNGT | 4 cut(s) | 130, 323, 507, 669 |
| HpyCH4V | TGCA | 9 cut(s) | 76, 98, 105, 161, 466, 621, 933, 1071, 1083 |
| HpyF3I | CTNAG | 1 cut(s) | 1016 |
| Hsp92I | GRCGYC | 1 cut(s) | 1049 |
| Hsp92II | CATG | 6 cut(s) | 46, 114, 400, 482, 592, 1096 |
| Kzo9I | GATC | 3 cut(s) | 116, 345, 694 |
| LguI | GCTCTTC | 1 cut(s) | 27 |
| LmnI | GCTCC | 3 cut(s) | 288, 498, 793 |
| Lsp1109I | GCAGC | 2 cut(s) | 917, 1002 |
| LweI | GCATC | 1 cut(s) | 475 |
| MaeI | CTAG | 1 cut(s) | 228 |
| MalI | GATC | 3 cut(s) | 118, 347, 696 |
| MboI | GATC | 3 cut(s) | 116, 345, 694 |
| MboII | GAAGA | 5 cut(s) | 44, 399, 782, 1023, 1208 |
| MfeI | CAATTG | 1 cut(s) | 1078 |
| MflI | RGATCY | 1 cut(s) | 694 |
| MhlI | GDGCHC | 2 cut(s) | 495, 563 |
| MlyI | GAGTC | 2 cut(s) | 466, 971 |
| MmeI | TCCRAC | 1 cut(s) | 954 |
| MseI | TTAA | 6 cut(s) | 173, 360, 473, 834, 1142, 1188 |
| MslI | CAYNNNNRTG | 2 cut(s) | 587, 738 |
| MspA1I | CMGCKG | 1 cut(s) | 860 |
| MspI | CCGG | 3 cut(s) | 220, 245, 626 |
| MspR9I | CCNGG | 1 cut(s) | 627 |
| MunI | CAATTG | 1 cut(s) | 1078 |
| MvnI | CGCG | 1 cut(s) | 519 |
| NciI | CCSGG | 1 cut(s) | 627 |
| NdeII | GATC | 3 cut(s) | 116, 345, 694 |
| NlaIII | CATG | 6 cut(s) | 46, 114, 400, 482, 592, 1096 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 249, 948 |
| PagI | TCATGA | 1 cut(s) | 1092 |
| PciSI | GCTCTTC | 1 cut(s) | 27 |
| PfeI | GAWTC | 6 cut(s) | 68, 241, 854, 1199, 1209, 1222 |
| Pfl23II | CGTACG | 1 cut(s) | 18 |
| PkrI | GCNGC | 3 cut(s) | 124, 932, 992 |
| PleI | GAGTC | 2 cut(s) | 465, 971 |
| PpsI | GAGTC | 2 cut(s) | 465, 971 |
| PpuMI | RGGWCCY | 1 cut(s) | 818 |
| PsiI | TTATAA | 1 cut(s) | 354 |
| Psp124BI | GAGCTC | 1 cut(s) | 495 |
| Psp5II | RGGWCCY | 1 cut(s) | 818 |
| PspFI | CCCAGC | 2 cut(s) | 631, 860 |
| PspLI | CGTACG | 1 cut(s) | 18 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 249, 948 |
| PspPI | GGNCC | 4 cut(s) | 217, 263, 712, 818 |
| PspPPI | RGGWCCY | 1 cut(s) | 818 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1012, 1044 |
| PstI | CTGCAG | 1 cut(s) | 935 |
| PsuI | RGATCY | 1 cut(s) | 694 |
| PvuII | CAGCTG | 1 cut(s) | 860 |
| RsaI | GTAC | 3 cut(s) | 20, 504, 731 |
| RsaNI | GTAC | 3 cut(s) | 19, 503, 730 |
| RseI | CAYNNNNRTG | 2 cut(s) | 587, 738 |
| SacI | GAGCTC | 1 cut(s) | 495 |
| SapI | GCTCTTC | 1 cut(s) | 27 |
| SaqAI | TTAA | 6 cut(s) | 173, 360, 473, 834, 1142, 1188 |
| SatI | GCNGC | 3 cut(s) | 123, 931, 991 |
| Sau3AI | GATC | 3 cut(s) | 116, 345, 694 |
| Sau96I | GGNCC | 4 cut(s) | 217, 263, 712, 818 |
| SchI | GAGTC | 2 cut(s) | 466, 971 |
| ScrFI | CCNGG | 1 cut(s) | 627 |
| SduI | GDGCHC | 2 cut(s) | 495, 563 |
| SfaNI | GCATC | 1 cut(s) | 475 |
| SfcI | CTRYAG | 1 cut(s) | 931 |
| SinI | GGWCC | 3 cut(s) | 217, 712, 818 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 587, 738 |
| SsiI | CCGC | 1 cut(s) | 123 |
| SspMI | CTAG | 1 cut(s) | 228 |
| SstI | GAGCTC | 1 cut(s) | 495 |
| StyD4I | CCNGG | 1 cut(s) | 625 |
| TaaI | ACNGT | 4 cut(s) | 130, 323, 507, 669 |
| TaqI | TCGA | 3 cut(s) | 312, 557, 1044 |
| TatI | WGTACW | 1 cut(s) | 502 |
| TauI | GCSGC | 1 cut(s) | 125 |
| TfiI | GAWTC | 6 cut(s) | 68, 241, 854, 1199, 1209, 1222 |
| Tru1I | TTAA | 6 cut(s) | 173, 360, 473, 834, 1142, 1188 |
| Tru9I | TTAA | 6 cut(s) | 173, 360, 473, 834, 1142, 1188 |
| TscAI | CASTG | 1 cut(s) | 133 |
| TseI | GCWGC | 2 cut(s) | 930, 990 |
| TspDTI | ATGAA | 4 cut(s) | 584, 1081, 1109, 1209 |
| TspGWI | ACGGA | 1 cut(s) | 290 |
| TspRI | CASTG | 1 cut(s) | 133 |
| VpaK11BI | GGWCC | 3 cut(s) | 217, 712, 818 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 291 |
| XapI | RAATTY | 4 cut(s) | 372, 655, 794, 1181 |
| XspI | CTAG | 1 cut(s) | 228 |