F-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 105 - 379 | 1.2e-44 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 699 |
| AccB1I | GGYRCC | 2 cut(s) | 4, 122 |
| AciI | CCGC | 2 cut(s) | 269, 733 |
| AclWI | GGATC | 2 cut(s) | 693, 1063 |
| AcsI | RAATTY | 2 cut(s) | 785, 1172 |
| AcuI | CTGAAG | 1 cut(s) | 344 |
| AcyI | GRCGYC | 2 cut(s) | 5, 123 |
| AdeI | CACNNNGTG | 1 cut(s) | 894 |
| AfaI | GTAC | 2 cut(s) | 20, 501 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 638 |
| AgsI | TTSAA | 4 cut(s) | 277, 298, 602, 1217 |
| AjnI | CCWGG | 2 cut(s) | 514, 631 |
| AluBI | AGCT | 3 cut(s) | 37, 490, 984 |
| AluI | AGCT | 3 cut(s) | 37, 490, 984 |
| Alw21I | GWGCWC | 2 cut(s) | 492, 723 |
| Alw26I | GTCTC | 2 cut(s) | 1102, 1155 |
| Alw44I | GTGCAC | 1 cut(s) | 719 |
| AlwI | GGATC | 2 cut(s) | 693, 1063 |
| Ama87I | CYCGRG | 1 cut(s) | 1158 |
| AoxI | GGCC | 3 cut(s) | 221, 266, 629 |
| ApaLI | GTGCAC | 1 cut(s) | 719 |
| ApeKI | GCWGC | 2 cut(s) | 519, 921 |
| ApoI | RAATTY | 2 cut(s) | 785, 1172 |
| AspLEI | GCGC | 2 cut(s) | 7, 125 |
| AspS9I | GGNCC | 3 cut(s) | 238, 809, 937 |
| AsuHPI | GGTGA | 3 cut(s) | 433, 653, 1147 |
| AvaI | CYCGRG | 1 cut(s) | 1158 |
| AvaII | GGWCC | 3 cut(s) | 238, 809, 937 |
| BaeGI | GKGCMC | 1 cut(s) | 723 |
| BanI | GGYRCC | 2 cut(s) | 4, 122 |
| BanII | GRGCYC | 2 cut(s) | 492, 569 |
| BbsI | GAAGAC | 1 cut(s) | 906 |
| Bbv12I | GWGCWC | 2 cut(s) | 492, 723 |
| BbvI | GCAGC | 2 cut(s) | 531, 908 |
| BccI | CCATC | 3 cut(s) | 239, 408, 1082 |
| BceAI | ACGGC | 2 cut(s) | 74, 236 |
| BciT130I | CCWGG | 2 cut(s) | 516, 633 |
| BcoDI | GTCTC | 2 cut(s) | 1102, 1155 |
| BfaI | CTAG | 1 cut(s) | 638 |
| BfmI | CTRYAG | 1 cut(s) | 922 |
| BfoI | RGCGCY | 2 cut(s) | 8, 126 |
| BisI | GCNGC | 4 cut(s) | 269, 520, 733, 922 |
| BlsI | GCNGC | 4 cut(s) | 270, 521, 734, 923 |
| Bme1390I | CCNGG | 2 cut(s) | 516, 633 |
| Bme18I | GGWCC | 3 cut(s) | 238, 809, 937 |
| BmeT110I | CYCGRG | 1 cut(s) | 1158 |
| BmgT120I | GGNCC | 3 cut(s) | 238, 809, 937 |
| BmiI | GGNNCC | 3 cut(s) | 6, 124, 939 |
| BmrFI | CCNGG | 2 cut(s) | 516, 633 |
| BmsI | GCATC | 2 cut(s) | 472, 1049 |
| BpiI | GAAGAC | 1 cut(s) | 906 |
| BpmI | CTGGAG | 1 cut(s) | 765 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 123 |
| BsaJI | CCNNGG | 2 cut(s) | 632, 904 |
| BsaWI | WCCGGW | 1 cut(s) | 537 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 638 |
| Bse1I | ACTGG | 1 cut(s) | 17 |
| BseBI | CCWGG | 2 cut(s) | 516, 633 |
| BseDI | CCNNGG | 2 cut(s) | 632, 904 |
| BseGI | GGATG | 3 cut(s) | 399, 419, 463 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 638 |
| BseMII | CTCAG | 1 cut(s) | 120 |
| BseNI | ACTGG | 1 cut(s) | 17 |
| BseRI | GAGGAG | 1 cut(s) | 216 |
| BseSI | GKGCMC | 1 cut(s) | 723 |
| BseXI | GCAGC | 2 cut(s) | 531, 908 |
| BsgI | GTGCAG | 1 cut(s) | 117 |
| BshFI | GGCC | 3 cut(s) | 223, 268, 631 |
| BshNI | GGYRCC | 2 cut(s) | 4, 122 |
| BsiHKAI | GWGCWC | 2 cut(s) | 492, 723 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1158 |
| BsiSI | CCGG | 1 cut(s) | 538 |
| BsiWI | CGTACG | 1 cut(s) | 18 |
| BslFI | GGGAC | 1 cut(s) | 923 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 638 |
| BsmAI | GTCTC | 2 cut(s) | 1102, 1155 |
| BsmFI | GGGAC | 1 cut(s) | 923 |
| BsnI | GGCC | 3 cut(s) | 223, 268, 631 |
| BsoBI | CYCGRG | 1 cut(s) | 1158 |
| Bsp1286I | GDGCHC | 3 cut(s) | 492, 569, 723 |
| Bsp143I | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| BspACI | CCGC | 2 cut(s) | 269, 733 |
| BspANI | GGCC | 3 cut(s) | 223, 268, 631 |
| BspCNI | CTCAG | 1 cut(s) | 121 |
| BspHI | TCATGA | 1 cut(s) | 1083 |
| BspLI | GGNNCC | 3 cut(s) | 6, 124, 939 |
| BspMAI | CTGCAG | 1 cut(s) | 926 |
| BspPI | GGATC | 2 cut(s) | 693, 1063 |
| BspQI | GCTCTTC | 1 cut(s) | 27 |
| BspT107I | GGYRCC | 2 cut(s) | 4, 122 |
| BsrI | ACTGG | 1 cut(s) | 17 |
| BssECI | CCNNGG | 2 cut(s) | 632, 904 |
| BssMI | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| BssNI | GRCGYC | 2 cut(s) | 5, 123 |
| BssT1I | CCWWGG | 1 cut(s) | 904 |
| Bst2UI | CCWGG | 2 cut(s) | 516, 633 |
| Bst4CI | ACNGT | 2 cut(s) | 320, 708 |
| Bst6I | CTCTTC | 1 cut(s) | 27 |
| BstACI | GRCGYC | 2 cut(s) | 5, 123 |
| BstC8I | GCNNGC | 1 cut(s) | 629 |
| BstDEI | CTNAG | 3 cut(s) | 129, 689, 1007 |
| BstF5I | GGATG | 3 cut(s) | 399, 419, 463 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 126 |
| BstHHI | GCGC | 2 cut(s) | 7, 125 |
| BstKTI | GATC | 5 cut(s) | 25, 119, 345, 688, 1058 |
| BstMAI | GTCTC | 2 cut(s) | 1102, 1155 |
| BstMBI | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| BstNI | CCWGG | 2 cut(s) | 516, 633 |
| BstSCI | CCNGG | 2 cut(s) | 514, 631 |
| BstSFI | CTRYAG | 1 cut(s) | 922 |
| BstSLI | GKGCMC | 1 cut(s) | 723 |
| BstV1I | GCAGC | 2 cut(s) | 531, 908 |
| BstV2I | GAAGAC | 1 cut(s) | 906 |
| BstX2I | RGATCY | 1 cut(s) | 685 |
| BstYI | RGATCY | 1 cut(s) | 685 |
| BsuRI | GGCC | 3 cut(s) | 223, 268, 631 |
| BtsCI | GGATG | 3 cut(s) | 399, 419, 463 |
| BtsIMutI | CAGTG | 1 cut(s) | 126 |
| Cac8I | GCNNGC | 1 cut(s) | 629 |
| CciI | TCATGA | 1 cut(s) | 1083 |
| CfoI | GCGC | 2 cut(s) | 7, 125 |
| Cfr13I | GGNCC | 3 cut(s) | 238, 809, 937 |
| Csp6I | GTAC | 2 cut(s) | 19, 500 |
| CviAII | CATG | 6 cut(s) | 111, 476, 595, 666, 1059, 1084 |
| CviQI | GTAC | 2 cut(s) | 19, 500 |
| DdeI | CTNAG | 3 cut(s) | 129, 689, 1007 |
| DinI | GGCGCC | 2 cut(s) | 6, 124 |
| DpnI | GATC | 5 cut(s) | 24, 118, 344, 687, 1057 |
| DpnII | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| DraI | TTTAAA | 1 cut(s) | 471 |
| DraIII | CACNNNGTG | 1 cut(s) | 894 |
| Eam1104I | CTCTTC | 1 cut(s) | 27 |
| EarI | CTCTTC | 1 cut(s) | 27 |
| Ecl136II | GAGCTC | 1 cut(s) | 490 |
| Eco130I | CCWWGG | 1 cut(s) | 904 |
| Eco24I | GRGCYC | 2 cut(s) | 492, 569 |
| Eco47I | GGWCC | 3 cut(s) | 238, 809, 937 |
| Eco53kI | GAGCTC | 1 cut(s) | 490 |
| Eco57I | CTGAAG | 1 cut(s) | 344 |
| Eco88I | CYCGRG | 1 cut(s) | 1158 |
| EcoICRI | GAGCTC | 1 cut(s) | 490 |
| EcoO109I | RGGNCCY | 2 cut(s) | 809, 937 |
| EcoRII | CCWGG | 2 cut(s) | 514, 631 |
| EcoT14I | CCWWGG | 1 cut(s) | 904 |
| EcoT22I | ATGCAT | 1 cut(s) | 659 |
| EcoT38I | GRGCYC | 2 cut(s) | 492, 569 |
| EgeI | GGCGCC | 2 cut(s) | 6, 124 |
| EheI | GGCGCC | 2 cut(s) | 6, 124 |
| ErhI | CCWWGG | 1 cut(s) | 904 |
| FaeI | CATG | 6 cut(s) | 114, 479, 598, 669, 1062, 1087 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 539, 571 |
| FaqI | GGGAC | 1 cut(s) | 923 |
| FatI | CATG | 6 cut(s) | 110, 475, 594, 665, 1058, 1083 |
| Fnu4HI | GCNGC | 4 cut(s) | 269, 520, 733, 922 |
| FokI | GGATG | 3 cut(s) | 406, 426, 450 |
| FriOI | GRGCYC | 2 cut(s) | 492, 569 |
| Fsp4HI | GCNGC | 4 cut(s) | 269, 520, 733, 922 |
| FspBI | CTAG | 1 cut(s) | 638 |
| GlaI | GCGC | 2 cut(s) | 6, 124 |
| GluI | GCNGC | 4 cut(s) | 269, 520, 733, 922 |
| GsuI | CTGGAG | 1 cut(s) | 765 |
| HaeII | RGCGCY | 2 cut(s) | 8, 126 |
| HaeIII | GGCC | 3 cut(s) | 223, 268, 631 |
| HapII | CCGG | 1 cut(s) | 538 |
| HhaI | GCGC | 2 cut(s) | 7, 125 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 123 |
| Hin1II | CATG | 6 cut(s) | 114, 479, 598, 669, 1062, 1087 |
| Hin6I | GCGC | 2 cut(s) | 5, 123 |
| HinP1I | GCGC | 2 cut(s) | 5, 123 |
| HinfI | GANTC | 7 cut(s) | 68, 454, 845, 968, 1190, 1200, 1213 |
| HpaII | CCGG | 1 cut(s) | 538 |
| HphI | GGTGA | 3 cut(s) | 433, 653, 1147 |
| Hpy166II | GTNNAC | 2 cut(s) | 721, 876 |
| Hpy188I | TCNGA | 6 cut(s) | 324, 583, 967, 973, 1045, 1107 |
| Hpy188III | TCNNGA | 6 cut(s) | 29, 782, 791, 1053, 1084, 1194 |
| Hpy8I | GTNNAC | 2 cut(s) | 721, 876 |
| HpyAV | CCTTC | 5 cut(s) | 319, 579, 1036, 1112, 1135 |
| HpyCH4III | ACNGT | 2 cut(s) | 320, 708 |
| HpyCH4V | TGCA | 9 cut(s) | 76, 98, 105, 161, 463, 627, 657, 721, 924 |
| HpyF3I | CTNAG | 3 cut(s) | 129, 689, 1007 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 123 |
| Hsp92II | CATG | 6 cut(s) | 114, 479, 598, 669, 1062, 1087 |
| HspAI | GCGC | 2 cut(s) | 5, 123 |
| KasI | GGCGCC | 2 cut(s) | 4, 122 |
| Kzo9I | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| LguI | GCTCTTC | 1 cut(s) | 27 |
| LmnI | GCTCC | 3 cut(s) | 495, 784, 981 |
| Lsp1109I | GCAGC | 2 cut(s) | 531, 908 |
| LweI | GCATC | 2 cut(s) | 472, 1049 |
| MaeI | CTAG | 1 cut(s) | 638 |
| MaeIII | GTNAC | 2 cut(s) | 242, 347 |
| MalI | GATC | 5 cut(s) | 24, 118, 344, 687, 1057 |
| MboI | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| MboII | GAAGA | 6 cut(s) | 17, 44, 773, 911, 1014, 1199 |
| MflI | RGATCY | 1 cut(s) | 685 |
| MhlI | GDGCHC | 3 cut(s) | 492, 569, 723 |
| MluCI | AATT | 6 cut(s) | 258, 646, 785, 1069, 1172, 1180 |
| Mly113I | GGCGCC | 2 cut(s) | 5, 123 |
| MlyI | GAGTC | 3 cut(s) | 62, 463, 962 |
| MmeI | TCCRAC | 2 cut(s) | 391, 945 |
| Mph1103I | ATGCAT | 1 cut(s) | 659 |
| MseI | TTAA | 9 cut(s) | 150, 173, 357, 470, 677, 825, 911, 1134, 1179 |
| MslI | CAYNNNNRTG | 1 cut(s) | 593 |
| MspI | CCGG | 1 cut(s) | 538 |
| MspR9I | CCNGG | 2 cut(s) | 516, 633 |
| MvaI | CCWGG | 2 cut(s) | 516, 633 |
| NarI | GGCGCC | 2 cut(s) | 5, 123 |
| NdeII | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| NlaIII | CATG | 6 cut(s) | 114, 479, 598, 669, 1062, 1087 |
| NlaIV | GGNNCC | 3 cut(s) | 6, 124, 939 |
| NsiI | ATGCAT | 1 cut(s) | 659 |
| PagI | TCATGA | 1 cut(s) | 1083 |
| PciSI | GCTCTTC | 1 cut(s) | 27 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 27 |
| PfeI | GAWTC | 4 cut(s) | 845, 1190, 1200, 1213 |
| Pfl23II | CGTACG | 1 cut(s) | 18 |
| PkrI | GCNGC | 4 cut(s) | 270, 521, 734, 923 |
| PleI | GAGTC | 3 cut(s) | 62, 462, 962 |
| PluTI | GGCGCC | 2 cut(s) | 8, 126 |
| PpsI | GAGTC | 3 cut(s) | 62, 462, 962 |
| PpuMI | RGGWCCY | 2 cut(s) | 809, 937 |
| PsiI | TTATAA | 1 cut(s) | 699 |
| Psp124BI | GAGCTC | 1 cut(s) | 492 |
| Psp5II | RGGWCCY | 2 cut(s) | 809, 937 |
| Psp6I | CCWGG | 2 cut(s) | 514, 631 |
| PspGI | CCWGG | 2 cut(s) | 514, 631 |
| PspLI | CGTACG | 1 cut(s) | 18 |
| PspN4I | GGNNCC | 3 cut(s) | 6, 124, 939 |
| PspPI | GGNCC | 3 cut(s) | 238, 809, 937 |
| PspPPI | RGGWCCY | 2 cut(s) | 809, 937 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1003, 1035 |
| PstI | CTGCAG | 1 cut(s) | 926 |
| PsuI | RGATCY | 1 cut(s) | 685 |
| RsaI | GTAC | 2 cut(s) | 20, 501 |
| RsaNI | GTAC | 2 cut(s) | 19, 500 |
| RseI | CAYNNNNRTG | 1 cut(s) | 593 |
| SacI | GAGCTC | 1 cut(s) | 492 |
| SapI | GCTCTTC | 1 cut(s) | 27 |
| SaqAI | TTAA | 9 cut(s) | 150, 173, 357, 470, 677, 825, 911, 1134, 1179 |
| SatI | GCNGC | 4 cut(s) | 269, 520, 733, 922 |
| Sau3AI | GATC | 5 cut(s) | 22, 116, 342, 685, 1055 |
| Sau96I | GGNCC | 3 cut(s) | 238, 809, 937 |
| SchI | GAGTC | 3 cut(s) | 62, 463, 962 |
| ScrFI | CCNGG | 2 cut(s) | 516, 633 |
| SduI | GDGCHC | 3 cut(s) | 492, 569, 723 |
| SfaNI | GCATC | 2 cut(s) | 472, 1049 |
| SfcI | CTRYAG | 1 cut(s) | 922 |
| SfoI | GGCGCC | 2 cut(s) | 6, 124 |
| SinI | GGWCC | 3 cut(s) | 238, 809, 937 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 593 |
| Sse9I | AATT | 6 cut(s) | 258, 646, 785, 1069, 1172, 1180 |
| SsiI | CCGC | 2 cut(s) | 269, 733 |
| SspDI | GGCGCC | 2 cut(s) | 4, 122 |
| SspI | AATATT | 3 cut(s) | 157, 372, 1049 |
| SspMI | CTAG | 1 cut(s) | 638 |
| SstI | GAGCTC | 1 cut(s) | 492 |
| StyD4I | CCNGG | 2 cut(s) | 514, 631 |
| StyI | CCWWGG | 1 cut(s) | 904 |
| TaaI | ACNGT | 2 cut(s) | 320, 708 |
| TaqI | TCGA | 2 cut(s) | 563, 1035 |
| TasI | AATT | 6 cut(s) | 258, 646, 785, 1069, 1172, 1180 |
| TauI | GCSGC | 2 cut(s) | 271, 735 |
| TfiI | GAWTC | 4 cut(s) | 845, 1190, 1200, 1213 |
| Tru1I | TTAA | 9 cut(s) | 150, 173, 357, 470, 677, 825, 911, 1134, 1179 |
| Tru9I | TTAA | 9 cut(s) | 150, 173, 357, 470, 677, 825, 911, 1134, 1179 |
| TscAI | CASTG | 1 cut(s) | 133 |
| TseI | GCWGC | 2 cut(s) | 519, 921 |
| TspDTI | ATGAA | 5 cut(s) | 393, 1072, 1100, 1154, 1200 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| TspRI | CASTG | 1 cut(s) | 133 |
| VneI | GTGCAC | 1 cut(s) | 719 |
| VpaK11BI | GGWCC | 3 cut(s) | 238, 809, 937 |
| XapI | RAATTY | 2 cut(s) | 785, 1172 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 210 |
| XspI | CTAG | 1 cut(s) | 638 |
| Zsp2I | ATGCAT | 1 cut(s) | 659 |