Rorug06G0199500

F-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000399
Physical Location & Seq
Reverse (-)
32051254 .. 32053018
1765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0199500.1

Sequence Viewer

Length: 1518 bp
ATGAAACCTATTTTCATTCCTCTTTACCCTTCCAGCTTGTTTCTACTCTTCGTCACCCTACTGGTGGCCGGCGAGTCCGCACCTATCTACTCTCCATCCGATGATATTACCCTTAACTGCGGCTCTTCCGGCGACACGGTCAGTAATTATGATTTTCAAACTTGGACGGGGGACATCAACTCAAAGTTTTTCCCCGAAGCAGTTGGTAGCGCATCCCAAGTCGAGAAAGCACCACCGTCGTCCTCCATGGGCAGCCAAGTGCCATTCACCACAGCTCGGCTTTCGTATTCGGAATTCGCTTACATCTTTCCCGTAAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCCCAGCTACGTACAACGTGGACTTCGACCGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACAGACTTCTCAAGGACTTCAACGCTTCTCTCAGTAGTACAGTCTACGATGGCTATGAGACGATACTTAGGGAATTCTGCGTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACATTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTCGGCAGCCCAAGGCGATGGGGCTAGTTATCTCGGCAGCATCGATAGCAGATATTACGTTGAAAACAACACCGCTCTGGAGATGATCTTCCGAATCAACGTTGGTGGCAGCCCAGTATCTCCGAATGAAGACACCGGCATGTATCGCACCTGGGATCCAATCGACGAGTTCTACTTGGATGATCTAAGTAGAAATTTGAGCGTTGCACGAAGATATAATACTCCTCTCAATTTTGCAAGAATCCCTAACTACACTGCACCCGAAGAGGTGTACCGAACAGGCCGGACAATGGGAGGGAACAACACCATCAACAAGAGCTACAATCTCACCTGGATATTCCCTGTAGATCCCGACTTTTCCTACCTGGTGAGGCTCCATTTCTGTGAGATTGAACCGAATTTTACAAAGTCTCGAGATAGAATGTTTCAGATTTTCATAGCCAATTTAACAGCTGAACCGTTCGCGGACATAATCTTTTGGACTACAGAAAATGGAGAAGGAAATGGGATTCCCATATATAGGGACTACTTTGTGCCGATGCTGAATCTTGGAACCCAGAAGAAGGGTTCTGTTAATCTCTTTGTTGCACTACAAGCAAATCAAGACGATTACCAAACTCGATATAACGATGCGATCTTGAATGGGCTGGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGACCCATCCCCGAGCTACCGAATATCCCGCCAAAGGTGACGTCGGAAAGCTCTAGAAACTCGAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGGTGTAGTTTCGGCCTTACTTGTTCTTTCCTTCCTCGGGTTTTTAGTTTTCAGGCGTGGAGGAAAAGTCAAGGATTCCAACTCCAGCCACAGGATGACGACGTCAACCATGACCCTTAATTAG

Protein Analysis

505

Amino Acids

56.43

Weight (kDa)

5.18

Isoelectric Point (pI)

35.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 38 - 423 1.5e-28 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000399)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g21230 FvH4_2g22763 FvH4_2g23250 FvH4_3g19214 FvH4_5g01761 FvH4_5g02180 FvH4_5g23981 FvH4_7g21350 FvH4_7g21590
malus_domestica MD00G1040400.v1.1 MD00G1057500.v1.1 MD05G1079000.v1.1 MD05G1357500.v1.1 MD05G1357800.v1.1
prunus_persica Prupe.4G213300_v2.0.a1 Prupe.8G190800_v2.0.a1 Prupe.8G190900_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0372911 RchiOBHm_Chr5g0006331 RchiOBHm_Chr5g0032291 RchiOBHm_Chr6g0287741 RchiOBHm_Chr6g0287791 RchiOBHm_Chr6g0289281 RchiOBHm_Chr6g0290581 RchiOBHm_Chr6g0290601 RchiOBHm_Chr7g0210061
rosa_laevigata RLG00000003898 RLG00000004101 RLG00000012190 RLG00000012194 RLG00000012196 RLG00000012198 RLG00000012199 RLG00000012200 RLG00000012278 RLG00000012316 RLG00000012346 RLG00000012468 RLG00000027389 RLG00000033378
rosa_multiflora Rmu_sc0000366.1_g000019 Rmu_sc0001082.1_g000011 Rmu_sc0001105.1_g000009 Rmu_sc0002290.1_g000001 Rmu_sc0003335.1_g000005 Rmu_sc0003335.1_g000007 Rmu_sc0003877.1_g000009 Rmu_sc0003877.1_g000011 Rmu_sc0004311.1_g000002 Rmu_sc0006266.1_g000019 Rmu_sc0006802.1_g000001 Rmu_sc0008789.1_g000004 Rmu_sc0010418.1_g000008 Rmu_sc0016104.1_g000004 Rmu_sc0022792.1_g000002 Rmu_sc0030012.1_g000001
rosa_roxburghii Rroxscaffold_3G00248640 Rroxscaffold_3G00258060 Rroxscaffold_4G00284630 Rroxscaffold_4G00291560 Rroxscaffold_7G00172250 Rroxscaffold_7G00176870 Rroxscaffold_7G00176900 Rroxscaffold_7G00176910 Rroxscaffold_7G00179370 Rroxscaffold_7G00181120 Rroxscaffold_7G00181140 Rroxscaffold_7G00181220
rosa_rugosa Rorug01G0324600 Rorug01G0324900 Rorug05G0130400 Rorug06G0191400 Rorug06G0191700 Rorug06G0192000 Rorug06G0192100 Rorug06G0199500 Rorug06G0199600 Rorug06G0210400 Rorug06G0213400 Rorug07G0044900
rosa_samantha Rh1BG289300 Rh5CG250500 Rh6DG111000 Rh6DG299100 Rh6DG299400 Rh6DG299700 Rh6DG300000 Rh6DG324600 Rh7BG171300
rosa_wichuraiana Rw0G015350 Rw1G029080 Rw1G029600 Rw5G020460 Rw6G026040 Rw6G028110 Rw6G028120 Rw6G028150 Rw6G031990 Rw7G014690 Rw7G014700 Rw7G015310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1340, 1499
AccBSI CCGCTC 2 cut(s) 381, 683
AccI GTMKAC 2 cut(s) 459, 1370
AccII CGCG 1 cut(s) 1073
AciI CCGC 9 cut(s) 78, 120, 337, 379, 517, 681, 1073, 1296, 1325
AclI AACGTT 1 cut(s) 708
AclWI GGATC 4 cut(s) 581, 758, 771, 950
AcoI YGGCCR 1 cut(s) 66
AcsI RAATTY 4 cut(s) 293, 488, 802, 1006
AcyI GRCGYC 2 cut(s) 1337, 1496
AfaI GTAC 3 cut(s) 362, 454, 881
AfiI CCNNNNNNNGG 9 cut(s) 64, 276, 548, 898, 1128, 1171, 1330, 1431, 1485
AgsI TTSAA 6 cut(s) 158, 436, 671, 1001, 1249, 1267
AjnI CCWGG 5 cut(s) 319, 546, 758, 938, 972
AluBI AGCT 7 cut(s) 36, 275, 356, 927, 1061, 1312, 1347
AluI AGCT 7 cut(s) 36, 275, 356, 927, 1061, 1312, 1347
Alw26I GTCTC 2 cut(s) 467, 1023
AlwI GGATC 4 cut(s) 581, 758, 771, 950
Ama87I CYCGRG 3 cut(s) 1020, 1307, 1430
AoxI GGCC 4 cut(s) 66, 322, 889, 1407
ApeKI GCWGC 4 cut(s) 252, 614, 645, 717
ApoI RAATTY 4 cut(s) 293, 488, 802, 1006
ArsI GACNNNNNNTTYG 4 cut(s) 1322, 1352, 1354, 1384
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 1 cut(s) 1298
AsuHPI GGTGA 5 cut(s) 46, 259, 928, 988, 1345
AvaI CYCGRG 3 cut(s) 1020, 1307, 1430
AvaII GGWCC 1 cut(s) 1298
BamHI GGATCC 1 cut(s) 763
BarI GAAGNNNNNNTAC 2 cut(s) 811, 843
BbsI GAAGAC 1 cut(s) 744
BbvI GCAGC 4 cut(s) 264, 626, 657, 729
BccI CCATC 5 cut(s) 103, 458, 620, 923, 1310
BceAI ACGGC 1 cut(s) 1300
BcgI CGANNNNNNTGC 4 cut(s) 219, 253, 1360, 1394
BciT130I CCWGG 5 cut(s) 321, 548, 760, 940, 974
BciVI GTATCC 1 cut(s) 548
BcoDI GTCTC 2 cut(s) 467, 1023
BfaI CTAG 2 cut(s) 633, 1350
BfmI CTRYAG 3 cut(s) 415, 951, 1092
BfuI GTATCC 1 cut(s) 548
BisI GCNGC 5 cut(s) 121, 253, 615, 646, 718
BlsI GCNGC 5 cut(s) 122, 254, 616, 647, 719
Bme1390I CCNGG 5 cut(s) 321, 548, 760, 940, 974
Bme18I GGWCC 1 cut(s) 1298
BmeT110I CYCGRG 3 cut(s) 1020, 1307, 1430
BmgT120I GGNCC 1 cut(s) 1298
BmiI GGNNCC 4 cut(s) 765, 983, 1162, 1300
BmrFI CCNGG 5 cut(s) 321, 548, 760, 940, 974
BmrI ACTGGG 1 cut(s) 716
BmsI GCATC 4 cut(s) 221, 657, 1137, 1228
BmuI ACTGGG 1 cut(s) 716
BpiI GAAGAC 1 cut(s) 744
BpmI CTGGAG 2 cut(s) 707, 1462
BpuEI CTTGAG 1 cut(s) 410
Bsa29I ATCGAT 1 cut(s) 651
BsaAI YACGTR 1 cut(s) 360
BsaBI GATNNNNATC 1 cut(s) 578
BsaHI GRCGYC 2 cut(s) 1337, 1496
BsaJI CCNNGG 5 cut(s) 246, 547, 619, 759, 1429
BsaXI ACNNNNNCTCC 4 cut(s) 523, 553, 1446, 1476
Bsc4I CCNNNNNNNGG 9 cut(s) 64, 276, 548, 898, 1128, 1171, 1330, 1431, 1485
Bse118I RCCGGY 4 cut(s) 68, 407, 743, 1394
Bse1I ACTGG 2 cut(s) 66, 722
Bse8I GATNNNNATC 1 cut(s) 578
BseBI CCWGG 5 cut(s) 321, 548, 760, 940, 974
BseCI ATCGAT 1 cut(s) 651
BseDI CCNNGG 5 cut(s) 246, 547, 619, 759, 1429
BseGI GGATG 6 cut(s) 95, 212, 333, 793, 1302, 1494
BseJI GATNNNNATC 1 cut(s) 578
BseLI CCNNNNNNNGG 9 cut(s) 64, 276, 548, 898, 1128, 1171, 1330, 1431, 1485
BseMII CTCAG 1 cut(s) 460
BseNI ACTGG 2 cut(s) 66, 722
BseRI GAGGAG 1 cut(s) 822
BseXI GCAGC 4 cut(s) 264, 626, 657, 729
BseYI CCCAGC 2 cut(s) 352, 542
BsgI GTGCAG 1 cut(s) 849
Bsh1236I CGCG 1 cut(s) 1073
Bsh1285I CGRYCG 1 cut(s) 379
BshFI GGCC 4 cut(s) 68, 324, 891, 1409
BshVI ATCGAT 1 cut(s) 651
BsiEI CGRYCG 1 cut(s) 379
BsiHKCI CYCGRG 3 cut(s) 1020, 1307, 1430
BsiSI CCGG 6 cut(s) 69, 129, 408, 744, 892, 1395
BslFI GGGAC 2 cut(s) 185, 1145
BslI CCNNNNNNNGG 9 cut(s) 64, 276, 548, 898, 1128, 1171, 1330, 1431, 1485
BsmAI GTCTC 2 cut(s) 467, 1023
BsmBI CGTCTC 1 cut(s) 467
BsmFI GGGAC 2 cut(s) 185, 1145
BsnI GGCC 4 cut(s) 68, 324, 891, 1409
BsoBI CYCGRG 3 cut(s) 1020, 1307, 1430
Bsp143I GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
Bsp19I CCATGG 1 cut(s) 246
BspACI CCGC 9 cut(s) 78, 120, 337, 379, 517, 681, 1073, 1296, 1325
BspANI GGCC 4 cut(s) 68, 324, 891, 1409
BspCNI CTCAG 1 cut(s) 459
BspDI ATCGAT 1 cut(s) 651
BspFNI CGCG 1 cut(s) 1073
BspLI GGNNCC 4 cut(s) 765, 983, 1162, 1300
BspPI GGATC 4 cut(s) 581, 758, 771, 950
BspQI GCTCTTC 1 cut(s) 130
BsrBI CCGCTC 2 cut(s) 381, 683
BsrFI RCCGGY 4 cut(s) 68, 407, 743, 1394
BsrI ACTGG 2 cut(s) 66, 722
BssAI RCCGGY 4 cut(s) 68, 407, 743, 1394
BssECI CCNNGG 5 cut(s) 246, 547, 619, 759, 1429
BssMI GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
BssNI GRCGYC 2 cut(s) 1337, 1496
BssT1I CCWWGG 2 cut(s) 246, 619
Bst2UI CCWGG 5 cut(s) 321, 548, 760, 940, 974
Bst4CI ACNGT 4 cut(s) 139, 237, 457, 1068
Bst6I CTCTTC 3 cut(s) 53, 130, 867
BstACI GRCGYC 2 cut(s) 1337, 1496
BstBAI YACGTR 1 cut(s) 360
BstC8I GCNNGC 2 cut(s) 70, 1383
BstDEI CTNAG 3 cut(s) 446, 482, 794
BstDSI CCRYGG 1 cut(s) 246
BstF5I GGATG 6 cut(s) 95, 212, 333, 793, 1302, 1494
BstFNI CGCG 1 cut(s) 1073
BstHHI GCGC 1 cut(s) 212
BstKTI GATC 7 cut(s) 514, 576, 696, 766, 793, 958, 1245
BstMAI GTCTC 2 cut(s) 467, 1023
BstMBI GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
BstMCI CGRYCG 1 cut(s) 379
BstMWI GCNNNNNNNGC 7 cut(s) 129, 514, 654, 753, 1202, 1293, 1391
BstNI CCWGG 5 cut(s) 321, 548, 760, 940, 974
BstNSI RCATGY 1 cut(s) 751
BstSCI CCNGG 5 cut(s) 319, 546, 758, 938, 972
BstSFI CTRYAG 3 cut(s) 415, 951, 1092
BstSNI TACGTA 1 cut(s) 360
BstUI CGCG 1 cut(s) 1073
BstV1I GCAGC 4 cut(s) 264, 626, 657, 729
BstV2I GAAGAC 1 cut(s) 744
BstX2I RGATCY 2 cut(s) 763, 955
BstXI CCANNNNNNTGG 1 cut(s) 626
BstYI RGATCY 2 cut(s) 763, 955
Bsu15I ATCGAT 1 cut(s) 651
BsuI GTATCC 1 cut(s) 548
BsuRI GGCC 4 cut(s) 68, 324, 891, 1409
BsuTUI ATCGAT 1 cut(s) 651
BtgI CCRYGG 1 cut(s) 246
BtgZI GCGATG 1 cut(s) 639
BtsCI GGATG 6 cut(s) 95, 212, 333, 793, 1302, 1494
BtsI GCAGTG 1 cut(s) 861
BtsIMutI CAGTG 1 cut(s) 861
Cac8I GCNNGC 2 cut(s) 70, 1383
CfoI GCGC 1 cut(s) 212
Cfr10I RCCGGY 4 cut(s) 68, 407, 743, 1394
Cfr13I GGNCC 1 cut(s) 1298
ClaI ATCGAT 1 cut(s) 651
CseI GACGC 1 cut(s) 484
CsiI ACCWGGT 1 cut(s) 972
Csp6I GTAC 3 cut(s) 361, 453, 880
CspCI CAANNNNNGTGG 4 cut(s) 391, 426, 694, 729
CviAII CATG 5 cut(s) 247, 583, 589, 748, 1504
CviQI GTAC 3 cut(s) 361, 453, 880
DdeI CTNAG 3 cut(s) 446, 482, 794
DpnI GATC 7 cut(s) 513, 575, 695, 765, 792, 957, 1244
DpnII GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
EaeI YGGCCR 1 cut(s) 66
Eam1104I CTCTTC 3 cut(s) 53, 130, 867
EarI CTCTTC 3 cut(s) 53, 130, 867
EciI GGCGGA 1 cut(s) 1311
Eco105I TACGTA 1 cut(s) 360
Eco130I CCWWGG 2 cut(s) 246, 619
Eco47I GGWCC 1 cut(s) 1298
Eco88I CYCGRG 3 cut(s) 1020, 1307, 1430
EcoRI GAATTC 2 cut(s) 293, 488
EcoRII CCWGG 5 cut(s) 319, 546, 758, 938, 972
EcoT14I CCWWGG 2 cut(s) 246, 619
ErhI CCWWGG 2 cut(s) 246, 619
Esp3I CGTCTC 1 cut(s) 467
FaeI CATG 5 cut(s) 250, 586, 592, 751, 1507
FaqI GGGAC 2 cut(s) 185, 1145
FatI CATG 5 cut(s) 246, 582, 588, 747, 1503
FauI CCCGC 1 cut(s) 1332
FblI GTMKAC 2 cut(s) 459, 1370
Fnu4HI GCNGC 5 cut(s) 121, 253, 615, 646, 718
FokI GGATG 6 cut(s) 82, 199, 320, 800, 1289, 1501
Fsp4HI GCNGC 5 cut(s) 121, 253, 615, 646, 718
FspBI CTAG 2 cut(s) 633, 1350
GlaI GCGC 1 cut(s) 211
GluI GCNGC 5 cut(s) 121, 253, 615, 646, 718
GsaI CCCAGC 2 cut(s) 356, 546
GsuI CTGGAG 2 cut(s) 707, 1462
HaeIII GGCC 4 cut(s) 68, 324, 891, 1409
HapII CCGG 6 cut(s) 69, 129, 408, 744, 892, 1395
HgaI GACGC 1 cut(s) 484
HhaI GCGC 1 cut(s) 212
Hin1I GRCGYC 2 cut(s) 1337, 1496
Hin1II CATG 5 cut(s) 250, 586, 592, 751, 1507
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HincII GTYRAC 3 cut(s) 499, 1371, 1500
HindII GTYRAC 3 cut(s) 499, 1371, 1500
HinfI GANTC 8 cut(s) 74, 520, 702, 849, 1117, 1153, 1372, 1469
HpaII CCGG 6 cut(s) 69, 129, 408, 744, 892, 1395
HphI GGTGA 5 cut(s) 46, 259, 928, 988, 1345
Hpy166II GTNNAC 6 cut(s) 370, 460, 499, 880, 1371, 1500
Hpy188I TCNGA 7 cut(s) 100, 292, 525, 701, 732, 1038, 1342
Hpy188III TCNNGA 8 cut(s) 223, 686, 959, 1020, 1022, 1211, 1246, 1350
Hpy8I GTNNAC 6 cut(s) 370, 460, 499, 880, 1371, 1500
Hpy99I CGWCG 4 cut(s) 241, 776, 1342, 1498
HpyAV CCTTC 4 cut(s) 39, 1100, 1165, 1435
HpyCH4III ACNGT 4 cut(s) 139, 237, 457, 1068
HpyCH4IV ACGT 6 cut(s) 359, 366, 666, 708, 1337, 1496
HpyCH4V TGCA 4 cut(s) 815, 845, 866, 1196
HpyF10VI GCNNNNNNNGC 7 cut(s) 129, 514, 654, 753, 1202, 1293, 1391
HpyF3I CTNAG 3 cut(s) 446, 482, 794
HpySE526I ACGT 6 cut(s) 359, 366, 666, 708, 1337, 1496
Hsp92I GRCGYC 2 cut(s) 1337, 1496
Hsp92II CATG 5 cut(s) 250, 586, 592, 751, 1507
HspAI GCGC 1 cut(s) 210
KroI GCCGGC 1 cut(s) 68
KroNI GCCGGC 1 cut(s) 70
Kzo9I GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
LguI GCTCTTC 1 cut(s) 130
LmnI GCTCC 1 cut(s) 987
Lsp1109I GCAGC 4 cut(s) 264, 626, 657, 729
LweI GCATC 4 cut(s) 221, 657, 1137, 1228
MabI ACCWGGT 1 cut(s) 972
MaeI CTAG 2 cut(s) 633, 1350
MaeII ACGT 6 cut(s) 359, 366, 666, 708, 1337, 1496
MaeIII GTNAC 2 cut(s) 52, 1333
MalI GATC 7 cut(s) 513, 575, 695, 765, 792, 957, 1244
MbiI CCGCTC 2 cut(s) 381, 683
MboI GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
MflI RGATCY 2 cut(s) 763, 955
MluCI AATT 8 cut(s) 145, 293, 488, 802, 838, 1006, 1051, 1513
MlyI GAGTC 3 cut(s) 83, 529, 1366
MmeI TCCRAC 2 cut(s) 1320, 1497
MnlI CCTC 9 cut(s) 30, 253, 843, 868, 896, 972, 1400, 1439, 1448
MroNI GCCGGC 1 cut(s) 68
MseI TTAA 5 cut(s) 114, 567, 1055, 1182, 1512
MslI CAYNNNNRTG 3 cut(s) 587, 746, 990
MspA1I CMGCKG 2 cut(s) 517, 1061
MspI CCGG 6 cut(s) 69, 129, 408, 744, 892, 1395
MspR9I CCNGG 5 cut(s) 321, 548, 760, 940, 974
MvaI CCWGG 5 cut(s) 321, 548, 760, 940, 974
MvnI CGCG 1 cut(s) 1073
MwoI GCNNNNNNNGC 7 cut(s) 129, 514, 654, 753, 1202, 1293, 1391
NaeI GCCGGC 1 cut(s) 70
NcoI CCATGG 1 cut(s) 246
NdeII GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
NgoMIV GCCGGC 1 cut(s) 68
NlaIII CATG 5 cut(s) 250, 586, 592, 751, 1507
NlaIV GGNNCC 4 cut(s) 765, 983, 1162, 1300
NmeAIII GCCGAG 4 cut(s) 256, 590, 621, 1272
NmuCI GTSAC 2 cut(s) 52, 1333
NspI RCATGY 1 cut(s) 751
PaeR7I CTCGAG 1 cut(s) 1020
PciSI GCTCTTC 1 cut(s) 130
PcsI WCGNNNNNNNCGW 2 cut(s) 372, 648
PdiI GCCGGC 1 cut(s) 70
PfeI GAWTC 5 cut(s) 702, 849, 1117, 1153, 1469
PflFI GACNNNGTC 2 cut(s) 137, 1495
PkrI GCNGC 5 cut(s) 122, 254, 616, 647, 719
PleI GAGTC 3 cut(s) 82, 528, 1366
PpsI GAGTC 3 cut(s) 82, 528, 1366
Ppu21I YACGTR 1 cut(s) 360
Psp1406I AACGTT 1 cut(s) 708
Psp6I CCWGG 5 cut(s) 319, 546, 758, 938, 972
PspFI CCCAGC 2 cut(s) 352, 542
PspGI CCWGG 5 cut(s) 319, 546, 758, 938, 972
PspN4I GGNNCC 4 cut(s) 765, 983, 1162, 1300
PspPI GGNCC 1 cut(s) 1298
PsuI RGATCY 2 cut(s) 763, 955
PsyI GACNNNGTC 2 cut(s) 137, 1495
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 3 cut(s) 362, 454, 881
RsaNI GTAC 3 cut(s) 361, 453, 880
RseI CAYNNNNRTG 3 cut(s) 587, 746, 990
SalI GTCGAC 1 cut(s) 1369
SapI GCTCTTC 1 cut(s) 130
SaqAI TTAA 5 cut(s) 114, 567, 1055, 1182, 1512
SatI GCNGC 5 cut(s) 121, 253, 615, 646, 718
Sau3AI GATC 7 cut(s) 511, 573, 693, 763, 790, 955, 1242
Sau96I GGNCC 1 cut(s) 1298
SchI GAGTC 3 cut(s) 83, 529, 1366
ScrFI CCNGG 5 cut(s) 321, 548, 760, 940, 974
SexAI ACCWGGT 1 cut(s) 972
SfaNI GCATC 4 cut(s) 221, 657, 1137, 1228
SfcI CTRYAG 3 cut(s) 415, 951, 1092
Sfr274I CTCGAG 1 cut(s) 1020
SgrAI CRCCGGYG 1 cut(s) 1394
SinI GGWCC 1 cut(s) 1298
SlaI CTCGAG 1 cut(s) 1020
SmiMI CAYNNNNRTG 3 cut(s) 587, 746, 990
SmlI CTYRAG 2 cut(s) 425, 1020
SmoI CTYRAG 2 cut(s) 425, 1020
SnaBI TACGTA 1 cut(s) 360
Sse9I AATT 8 cut(s) 145, 293, 488, 802, 838, 1006, 1051, 1513
SsiI CCGC 9 cut(s) 78, 120, 337, 379, 517, 681, 1073, 1296, 1325
SspMI CTAG 2 cut(s) 633, 1350
StyD4I CCNGG 5 cut(s) 319, 546, 758, 938, 972
StyI CCWWGG 2 cut(s) 246, 619
TaaI ACNGT 4 cut(s) 139, 237, 457, 1068
TaiI ACGT 6 cut(s) 362, 369, 669, 711, 1340, 1499
TasI AATT 8 cut(s) 145, 293, 488, 802, 838, 1006, 1051, 1513
TatI WGTACW 1 cut(s) 452
TauI GCSGC 1 cut(s) 123
TfiI GAWTC 5 cut(s) 702, 849, 1117, 1153, 1469
Tru1I TTAA 5 cut(s) 114, 567, 1055, 1182, 1512
Tru9I TTAA 5 cut(s) 114, 567, 1055, 1182, 1512
TscAI CASTG 1 cut(s) 868
TseFI GTSAC 2 cut(s) 52, 1333
TseI GCWGC 4 cut(s) 252, 614, 645, 717
Tsp45I GTSAC 2 cut(s) 52, 1333
TspDTI ATGAA 5 cut(s) 4, 17, 322, 750, 1033
TspRI CASTG 1 cut(s) 868
Tth111I GACNNNGTC 2 cut(s) 137, 1495
VpaK11BI GGWCC 1 cut(s) 1298
XapI RAATTY 4 cut(s) 293, 488, 802, 1006
XbaI TCTAGA 1 cut(s) 1349
XceI RCATGY 1 cut(s) 751
XhoI CTCGAG 1 cut(s) 1020
XmiI GTMKAC 2 cut(s) 459, 1370
XspI CTAG 2 cut(s) 633, 1350
ZraI GACGTC 2 cut(s) 1338, 1497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.