F-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 140 - 369 | 3.1e-38 | KIB1-4 beta-propeller |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 669 |
| AccB1I | GGYRCC | 2 cut(s) | 82, 200 |
| AciI | CCGC | 3 cut(s) | 347, 703, 821 |
| AclWI | GGATC | 2 cut(s) | 663, 1033 |
| AcsI | RAATTY | 2 cut(s) | 755, 1142 |
| AcuI | CTGAAG | 2 cut(s) | 21, 422 |
| AcyI | GRCGYC | 2 cut(s) | 83, 201 |
| AdeI | CACNNNGTG | 1 cut(s) | 864 |
| AfaI | GTAC | 2 cut(s) | 98, 471 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 325, 608, 1180 |
| AflIII | ACRYGT | 1 cut(s) | 1132 |
| AgsI | TTSAA | 6 cut(s) | 355, 376, 572, 905, 1150, 1187 |
| AjnI | CCWGG | 2 cut(s) | 484, 601 |
| AluBI | AGCT | 2 cut(s) | 115, 954 |
| AluI | AGCT | 2 cut(s) | 115, 954 |
| Alw21I | GWGCWC | 2 cut(s) | 693, 804 |
| Alw26I | GTCTC | 1 cut(s) | 1072 |
| Alw44I | GTGCAC | 1 cut(s) | 689 |
| AlwI | GGATC | 2 cut(s) | 663, 1033 |
| AoxI | GGCC | 3 cut(s) | 299, 344, 599 |
| ApaLI | GTGCAC | 1 cut(s) | 689 |
| ApeKI | GCWGC | 2 cut(s) | 489, 891 |
| ApoI | RAATTY | 2 cut(s) | 755, 1142 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 355, 387 |
| AspLEI | GCGC | 2 cut(s) | 85, 203 |
| AspS9I | GGNCC | 2 cut(s) | 316, 779 |
| AsuC2I | CCSGG | 1 cut(s) | 326 |
| AsuHPI | GGTGA | 2 cut(s) | 623, 1117 |
| AvaII | GGWCC | 2 cut(s) | 316, 779 |
| BaeGI | GKGCMC | 1 cut(s) | 693 |
| BanI | GGYRCC | 2 cut(s) | 82, 200 |
| BanII | GRGCYC | 1 cut(s) | 539 |
| Bbv12I | GWGCWC | 2 cut(s) | 693, 804 |
| BbvI | GCAGC | 2 cut(s) | 501, 878 |
| BccI | CCATC | 3 cut(s) | 73, 317, 1052 |
| BceAI | ACGGC | 2 cut(s) | 152, 314 |
| BciT130I | CCWGG | 2 cut(s) | 486, 603 |
| BclI | TGATCA | 1 cut(s) | 7 |
| BcnI | CCSGG | 1 cut(s) | 326 |
| BcoDI | GTCTC | 1 cut(s) | 1072 |
| BfaI | CTAG | 3 cut(s) | 47, 608, 699 |
| BfmI | CTRYAG | 1 cut(s) | 892 |
| BfoI | RGCGCY | 2 cut(s) | 86, 204 |
| BisI | GCNGC | 4 cut(s) | 347, 490, 703, 892 |
| BlsI | GCNGC | 4 cut(s) | 348, 491, 704, 893 |
| Bme1390I | CCNGG | 3 cut(s) | 326, 486, 603 |
| Bme18I | GGWCC | 2 cut(s) | 316, 779 |
| BmgT120I | GGNCC | 2 cut(s) | 316, 779 |
| BmiI | GGNNCC | 4 cut(s) | 84, 148, 202, 330 |
| BmrFI | CCNGG | 3 cut(s) | 326, 486, 603 |
| BmsI | GCATC | 2 cut(s) | 442, 1019 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 17, 49 |
| BpmI | CTGGAG | 1 cut(s) | 735 |
| BpuMI | CCSGG | 1 cut(s) | 326 |
| BsaHI | GRCGYC | 2 cut(s) | 83, 201 |
| BsaJI | CCNNGG | 3 cut(s) | 20, 602, 874 |
| BsaWI | WCCGGW | 1 cut(s) | 507 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 325, 608, 1180 |
| Bse1I | ACTGG | 1 cut(s) | 95 |
| BseBI | CCWGG | 2 cut(s) | 486, 603 |
| BseDI | CCNNGG | 3 cut(s) | 20, 602, 874 |
| BseGI | GGATG | 2 cut(s) | 10, 433 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 325, 608, 1180 |
| BseMII | CTCAG | 2 cut(s) | 198, 357 |
| BseNI | ACTGG | 1 cut(s) | 95 |
| BseRI | GAGGAG | 1 cut(s) | 294 |
| BseSI | GKGCMC | 1 cut(s) | 693 |
| BseXI | GCAGC | 2 cut(s) | 501, 878 |
| BsgI | GTGCAG | 1 cut(s) | 195 |
| BshFI | GGCC | 3 cut(s) | 301, 346, 601 |
| BshNI | GGYRCC | 2 cut(s) | 82, 200 |
| BsiHKAI | GWGCWC | 2 cut(s) | 693, 804 |
| BsiSI | CCGG | 2 cut(s) | 326, 508 |
| BsiWI | CGTACG | 1 cut(s) | 96 |
| BslFI | GGGAC | 1 cut(s) | 893 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 325, 608, 1180 |
| BsmAI | GTCTC | 1 cut(s) | 1072 |
| BsmFI | GGGAC | 1 cut(s) | 893 |
| BsnI | GGCC | 3 cut(s) | 301, 346, 601 |
| Bsp1286I | GDGCHC | 3 cut(s) | 539, 693, 804 |
| Bsp143I | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| BspACI | CCGC | 3 cut(s) | 347, 703, 821 |
| BspANI | GGCC | 3 cut(s) | 301, 346, 601 |
| BspCNI | CTCAG | 2 cut(s) | 199, 358 |
| BspHI | TCATGA | 1 cut(s) | 1053 |
| BspLI | GGNNCC | 4 cut(s) | 84, 148, 202, 330 |
| BspMAI | CTGCAG | 1 cut(s) | 896 |
| BspPI | GGATC | 2 cut(s) | 663, 1033 |
| BspQI | GCTCTTC | 1 cut(s) | 105 |
| BspT107I | GGYRCC | 2 cut(s) | 82, 200 |
| BsrI | ACTGG | 1 cut(s) | 95 |
| BssECI | CCNNGG | 3 cut(s) | 20, 602, 874 |
| BssMI | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| BssNI | GRCGYC | 2 cut(s) | 83, 201 |
| BssT1I | CCWWGG | 1 cut(s) | 874 |
| Bst2UI | CCWGG | 2 cut(s) | 486, 603 |
| Bst4CI | ACNGT | 2 cut(s) | 398, 678 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 61, 105 |
| BstACI | GRCGYC | 2 cut(s) | 83, 201 |
| BstC8I | GCNNGC | 1 cut(s) | 599 |
| BstDEI | CTNAG | 4 cut(s) | 207, 366, 659, 977 |
| BstDSI | CCRYGG | 1 cut(s) | 20 |
| BstF5I | GGATG | 2 cut(s) | 10, 433 |
| BstH2I | RGCGCY | 2 cut(s) | 86, 204 |
| BstHHI | GCGC | 2 cut(s) | 85, 203 |
| BstKTI | GATC | 6 cut(s) | 10, 103, 197, 460, 658, 1028 |
| BstMAI | GTCTC | 1 cut(s) | 1072 |
| BstMBI | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| BstNI | CCWGG | 2 cut(s) | 486, 603 |
| BstSCI | CCNGG | 3 cut(s) | 324, 484, 601 |
| BstSFI | CTRYAG | 1 cut(s) | 892 |
| BstSLI | GKGCMC | 1 cut(s) | 693 |
| BstV1I | GCAGC | 2 cut(s) | 501, 878 |
| BstX2I | RGATCY | 1 cut(s) | 655 |
| BstYI | RGATCY | 1 cut(s) | 655 |
| BsuRI | GGCC | 3 cut(s) | 301, 346, 601 |
| BtgI | CCRYGG | 1 cut(s) | 20 |
| BtsCI | GGATG | 2 cut(s) | 10, 433 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 1 cut(s) | 599 |
| CciI | TCATGA | 1 cut(s) | 1053 |
| CfoI | GCGC | 2 cut(s) | 85, 203 |
| Cfr13I | GGNCC | 2 cut(s) | 316, 779 |
| Csp6I | GTAC | 2 cut(s) | 97, 470 |
| CviAII | CATG | 5 cut(s) | 189, 565, 636, 1029, 1054 |
| CviQI | GTAC | 2 cut(s) | 97, 470 |
| DdeI | CTNAG | 4 cut(s) | 207, 366, 659, 977 |
| DinI | GGCGCC | 2 cut(s) | 84, 202 |
| DpnI | GATC | 6 cut(s) | 9, 102, 196, 459, 657, 1027 |
| DpnII | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| DraI | TTTAAA | 1 cut(s) | 441 |
| DraIII | CACNNNGTG | 1 cut(s) | 864 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 61, 105 |
| EarI | CTCTTC | 3 cut(s) | 40, 61, 105 |
| Eco130I | CCWWGG | 1 cut(s) | 874 |
| Eco24I | GRGCYC | 1 cut(s) | 539 |
| Eco47I | GGWCC | 2 cut(s) | 316, 779 |
| Eco57I | CTGAAG | 2 cut(s) | 21, 422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 779 |
| EcoRII | CCWGG | 2 cut(s) | 484, 601 |
| EcoT14I | CCWWGG | 1 cut(s) | 874 |
| EcoT22I | ATGCAT | 1 cut(s) | 629 |
| EcoT38I | GRGCYC | 1 cut(s) | 539 |
| EgeI | GGCGCC | 2 cut(s) | 84, 202 |
| EheI | GGCGCC | 2 cut(s) | 84, 202 |
| ErhI | CCWWGG | 1 cut(s) | 874 |
| FaeI | CATG | 5 cut(s) | 192, 568, 639, 1032, 1057 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 509, 541 |
| FaqI | GGGAC | 1 cut(s) | 893 |
| FatI | CATG | 5 cut(s) | 188, 564, 635, 1028, 1053 |
| FauI | CCCGC | 1 cut(s) | 814 |
| FbaI | TGATCA | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 4 cut(s) | 347, 490, 703, 892 |
| FokI | GGATG | 2 cut(s) | 17, 420 |
| FriOI | GRGCYC | 1 cut(s) | 539 |
| Fsp4HI | GCNGC | 4 cut(s) | 347, 490, 703, 892 |
| FspBI | CTAG | 3 cut(s) | 47, 608, 699 |
| GlaI | GCGC | 2 cut(s) | 84, 202 |
| GluI | GCNGC | 4 cut(s) | 347, 490, 703, 892 |
| GsuI | CTGGAG | 1 cut(s) | 735 |
| HaeII | RGCGCY | 2 cut(s) | 86, 204 |
| HaeIII | GGCC | 3 cut(s) | 301, 346, 601 |
| HapII | CCGG | 2 cut(s) | 326, 508 |
| HhaI | GCGC | 2 cut(s) | 85, 203 |
| Hin1I | GRCGYC | 2 cut(s) | 83, 201 |
| Hin1II | CATG | 5 cut(s) | 192, 568, 639, 1032, 1057 |
| Hin6I | GCGC | 2 cut(s) | 83, 201 |
| HinP1I | GCGC | 2 cut(s) | 83, 201 |
| HincII | GTYRAC | 2 cut(s) | 846, 1138 |
| HindII | GTYRAC | 2 cut(s) | 846, 1138 |
| HinfI | GANTC | 6 cut(s) | 26, 424, 815, 938, 1160, 1170 |
| HpaII | CCGG | 2 cut(s) | 326, 508 |
| HphI | GGTGA | 2 cut(s) | 623, 1117 |
| Hpy166II | GTNNAC | 4 cut(s) | 52, 691, 846, 1138 |
| Hpy188I | TCNGA | 7 cut(s) | 12, 402, 553, 937, 943, 1015, 1077 |
| Hpy188III | TCNNGA | 6 cut(s) | 107, 752, 761, 1023, 1054, 1164 |
| Hpy8I | GTNNAC | 4 cut(s) | 52, 691, 846, 1138 |
| HpyAV | CCTTC | 6 cut(s) | 53, 397, 549, 1006, 1082, 1105 |
| HpyCH4III | ACNGT | 2 cut(s) | 398, 678 |
| HpyCH4IV | ACGT | 1 cut(s) | 1134 |
| HpyCH4V | TGCA | 9 cut(s) | 154, 176, 183, 239, 433, 597, 627, 691, 894 |
| HpyF3I | CTNAG | 4 cut(s) | 207, 366, 659, 977 |
| HpySE526I | ACGT | 1 cut(s) | 1134 |
| Hsp92I | GRCGYC | 2 cut(s) | 83, 201 |
| Hsp92II | CATG | 5 cut(s) | 192, 568, 639, 1032, 1057 |
| HspAI | GCGC | 2 cut(s) | 83, 201 |
| KasI | GGCGCC | 2 cut(s) | 82, 200 |
| Ksp22I | TGATCA | 1 cut(s) | 7 |
| Kzo9I | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| LguI | GCTCTTC | 1 cut(s) | 105 |
| LmnI | GCTCC | 2 cut(s) | 754, 951 |
| Lsp1109I | GCAGC | 2 cut(s) | 501, 878 |
| LweI | GCATC | 2 cut(s) | 442, 1019 |
| MaeI | CTAG | 3 cut(s) | 47, 608, 699 |
| MaeII | ACGT | 1 cut(s) | 1134 |
| MaeIII | GTNAC | 1 cut(s) | 320 |
| MalI | GATC | 6 cut(s) | 9, 102, 196, 459, 657, 1027 |
| MboI | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| MboII | GAAGA | 9 cut(s) | 27, 78, 95, 122, 522, 743, 984, 1138, 1169 |
| MflI | RGATCY | 1 cut(s) | 655 |
| MhlI | GDGCHC | 3 cut(s) | 539, 693, 804 |
| MluCI | AATT | 7 cut(s) | 72, 336, 616, 755, 1039, 1142, 1150 |
| Mly113I | GGCGCC | 2 cut(s) | 83, 201 |
| MlyI | GAGTC | 3 cut(s) | 35, 433, 932 |
| MmeI | TCCRAC | 1 cut(s) | 915 |
| Mph1103I | ATGCAT | 1 cut(s) | 629 |
| MseI | TTAA | 6 cut(s) | 251, 440, 647, 795, 881, 1104 |
| MslI | CAYNNNNRTG | 1 cut(s) | 563 |
| MspA1I | CMGCKG | 1 cut(s) | 821 |
| MspI | CCGG | 2 cut(s) | 326, 508 |
| MspR9I | CCNGG | 3 cut(s) | 326, 486, 603 |
| MvaI | CCWGG | 2 cut(s) | 486, 603 |
| NarI | GGCGCC | 2 cut(s) | 83, 201 |
| NciI | CCSGG | 1 cut(s) | 326 |
| NdeII | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| NlaIII | CATG | 5 cut(s) | 192, 568, 639, 1032, 1057 |
| NlaIV | GGNNCC | 4 cut(s) | 84, 148, 202, 330 |
| NsiI | ATGCAT | 1 cut(s) | 629 |
| PagI | TCATGA | 1 cut(s) | 1053 |
| PciSI | GCTCTTC | 1 cut(s) | 105 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PfeI | GAWTC | 3 cut(s) | 815, 1160, 1170 |
| Pfl23II | CGTACG | 1 cut(s) | 96 |
| PkrI | GCNGC | 4 cut(s) | 348, 491, 704, 893 |
| PleI | GAGTC | 3 cut(s) | 34, 432, 932 |
| PluTI | GGCGCC | 2 cut(s) | 86, 204 |
| PpsI | GAGTC | 3 cut(s) | 34, 432, 932 |
| PpuMI | RGGWCCY | 1 cut(s) | 779 |
| PsiI | TTATAA | 1 cut(s) | 669 |
| Psp5II | RGGWCCY | 1 cut(s) | 779 |
| Psp6I | CCWGG | 2 cut(s) | 484, 601 |
| PspGI | CCWGG | 2 cut(s) | 484, 601 |
| PspLI | CGTACG | 1 cut(s) | 96 |
| PspN4I | GGNNCC | 4 cut(s) | 84, 148, 202, 330 |
| PspPI | GGNCC | 2 cut(s) | 316, 779 |
| PspPPI | RGGWCCY | 1 cut(s) | 779 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 973, 1005 |
| PstI | CTGCAG | 1 cut(s) | 896 |
| PsuI | RGATCY | 1 cut(s) | 655 |
| RsaI | GTAC | 2 cut(s) | 98, 471 |
| RsaNI | GTAC | 2 cut(s) | 97, 470 |
| RseI | CAYNNNNRTG | 1 cut(s) | 563 |
| SapI | GCTCTTC | 1 cut(s) | 105 |
| SaqAI | TTAA | 6 cut(s) | 251, 440, 647, 795, 881, 1104 |
| SatI | GCNGC | 4 cut(s) | 347, 490, 703, 892 |
| Sau3AI | GATC | 6 cut(s) | 7, 100, 194, 457, 655, 1025 |
| Sau96I | GGNCC | 2 cut(s) | 316, 779 |
| SchI | GAGTC | 3 cut(s) | 35, 433, 932 |
| ScrFI | CCNGG | 3 cut(s) | 326, 486, 603 |
| SduI | GDGCHC | 3 cut(s) | 539, 693, 804 |
| SfaNI | GCATC | 2 cut(s) | 442, 1019 |
| SfcI | CTRYAG | 1 cut(s) | 892 |
| SfoI | GGCGCC | 2 cut(s) | 84, 202 |
| SinI | GGWCC | 2 cut(s) | 316, 779 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 563 |
| Sse9I | AATT | 7 cut(s) | 72, 336, 616, 755, 1039, 1142, 1150 |
| SsiI | CCGC | 3 cut(s) | 347, 703, 821 |
| SspDI | GGCGCC | 2 cut(s) | 82, 200 |
| SspI | AATATT | 1 cut(s) | 235 |
| SspMI | CTAG | 3 cut(s) | 47, 608, 699 |
| StyD4I | CCNGG | 3 cut(s) | 324, 484, 601 |
| StyI | CCWWGG | 1 cut(s) | 874 |
| TaaI | ACNGT | 2 cut(s) | 398, 678 |
| TaiI | ACGT | 1 cut(s) | 1137 |
| TaqI | TCGA | 3 cut(s) | 77, 533, 1005 |
| TasI | AATT | 7 cut(s) | 72, 336, 616, 755, 1039, 1142, 1150 |
| TauI | GCSGC | 2 cut(s) | 349, 705 |
| TfiI | GAWTC | 3 cut(s) | 815, 1160, 1170 |
| Tru1I | TTAA | 6 cut(s) | 251, 440, 647, 795, 881, 1104 |
| Tru9I | TTAA | 6 cut(s) | 251, 440, 647, 795, 881, 1104 |
| TscAI | CASTG | 1 cut(s) | 211 |
| TseI | GCWGC | 2 cut(s) | 489, 891 |
| TspDTI | ATGAA | 4 cut(s) | 1042, 1070, 1124, 1170 |
| TspGWI | ACGGA | 1 cut(s) | 308 |
| TspRI | CASTG | 1 cut(s) | 211 |
| VneI | GTGCAC | 1 cut(s) | 689 |
| VpaK11BI | GGWCC | 2 cut(s) | 316, 779 |
| XapI | RAATTY | 2 cut(s) | 755, 1142 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 288 |
| XspI | CTAG | 3 cut(s) | 47, 608, 699 |
| Zsp2I | ATGCAT | 1 cut(s) | 629 |