AT1G66950
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
24978121 .. 24984619
6499 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G66950.1

Sequence Viewer

Length: 4365 bp
ATGGCCGCAATGCTAGGACGAGATGAAGATCCGGTCGGAGCATTGAGTGGGAGAGTGAGTTTGGCCTCCACCAGTCACAGGAGTTTGGTCGGAGCTTCCAAAAGCTTTCGAGATGTGTTCATGCCTCAAACTGACGAGGTGTTTGGGAGGAGCGAACGTCGGGAGGAAGATGACATGGAGCTCCGATGGGCGGCGATTGAGAGATTGCCGACGTTTGATCGGCTACGTAAAGGGATGTTGCCGCAAACGTCGGCTAACGGGAAGATTGAGCTTGAGGATATTGACCTAACAAGGCTCGAACCTAAGGATAAGAAACACCTTATGGAAATGATTTTGAGTTTCGTTGAAGAAGACAATGAAAAGTTTCTACGTGATTTGAGAGAAAGAACAGATAGAGTGGGAATTGAAGTTCCAAAAATTGAAGTAAGGTATGAGAATATTTCAGTGGAAGGAGATGTGCGTAGTGCAAGTAGAGCGCTTCCTACTCTCTTCAACGTCACCTTGAATACATTGGAGAGCATTCTTGGATTCTTCCACCTCCTTCCATCTAAAAGGAAAAAGATTCAGATACTAAAAGATATCAGCGGCATTGTCAAACCATCAAGGATGACTTTATTACTTGGTCCACCAAGCTCAGGAAAAACAACTTTGTTACAAGCTTTGGCTGGGAAGCTCGATGACACTCTCCAGATGTCGGGGAGGATAACATATTGCGGTCATGAGTTTCGCGAGTTTGTACCTCAAAAGACGTGTGCATACATCAGTCAACATGACCTTCACTTTGGAGAAATGACGGTGAGAGAGATACTGGATTTTTCGGGACGATGTCTAGGTGTTGGAAGTCGGTACCAGTTGATGTCTGAGCTTTCAAGGAGGGAGAAAGAAGAGGGAATAAAGCCAGACCCTAAAATTGATGCATTCATGAAATCCATTGCTATATCAGGGCAAGAAACTAGCTTGGTTACAGATTATGTACTTAAGATACTTGGTCTAGACATTTGTGCTGACATACTTGCTGGAGACGTAATGAGAAGAGGTATTTCTGGTGGACAGAAGAAGCGTCTAACAACAGGAGAGATGTTGGTAGGACCTGCGAGAGCTCTTTTTATGGATGAAATATCAACAGGGTTGGATAGTTCCACAACATTTCAAATTTGCAAGTTCATGAGGCAACTAGTTCATATCTCGGATGTCACGATGATTATTTCGCTTCTACAACCAGCACCAGAGACATTCGAGCTTTTTGACGACATTATCTTGCTTTCCGAGGGCCAAATTGTCTACCAAGGCCCACGGGACAACGTTCTTGAGTTCTTTGAATACTTTGGTTTCCAATGTCCTGAAAGAAAAGGGGTTGCAGACTTTCTACAAGAAGTTACGTCTAAGAAGGACCAAGAACAGTATTGGAACAAGAGAGAACAACCTTATAACTATGTGTCCGTAAGTGATTTTTCAAGCGGCTTTAGTACTTTCCACACCGGGCAGAAACTTACTTCAGAATTCAGGGTTCCCTATGACAAAGCTAAAACTCATTCTGCTGCACTAGTCACACAAAAGTATGGTATATCAAACTGGGAGCTCTTCAAAGCATGCTTTGATAGGGAATGGTTGCTTATGAAACGCAACTCCTTTGTGTATGTGTTCAAGACCGTCCAGATAACAATCATGTCTTTGATTACCATGACGGTCTATCTTAGGACAGAAATGCATGTTGGTACCGTGCGAGATGGTCAAAAGTTTTATGGTGCTATGTTTTTCAGCTTGATCAATGTTATGTTTAATGGACTAGCTGAACTAGCATTCACAGTGATGAGGCTCCCGGTGTTCTACAAGCAGAGGGACTTCTTGTTCTACCCTCCATGGGCTTTTGCCTTACCTGCTTGGCTTCTGAAGATTCCATTATCTCTTATCGAATCAGGAATATGGATTGGTCTTACGTATTATACTATCGGTTTTGCTCCTTCCGCTGCAAGGTTTTTCCGGCAGTTGCTAGCATACTTCTGTGTGAATCAGATGGCCCTTTCTTTGTTTAGATTCCTTGGAGCCATTGGAAGAACAGAAGTAATCTCTAACTCAATCGGAACGTTCACATTGCTAATTGTATTTACTCTTGGAGGCTTCATTATTGCTAAAGATGACATTCGACCGTGGATGACTTGGGCTTATTATATGTCCCCTATGATGTATGGACAGACTGCTATTGTTATGAATGAATTTCTCGATGAGAGATGGAGCAGTCCCAACTATGATACCCGCATCAACGCGAAAACAGTTGGAGAAGTCCTACTAAAGAGCCGGGGCTTCTTTACGGAGCCATACTGGTTTTGGATATGTATTGTGGCACTACTTGGATTTTCTTTGTTGTTCAATCTCTTCTACATACTAGCCTTGATGTATTTGAACCCTCTTGGTAACTCCAAAGCTACAGTTGTGGAAGAAGGTAAAGACAAACAAAAAGGGGAAAACCGTGGAACAGAAGGTTCTGTTGTGGAACTTAATAGTTCTTCAAATAAAGGGCCAAAGAGAGGAATGGTTTTACCTTTTCAACCACTTTCTCTTGCATTCAACAATGTGAACTACTACGTTGATATGCCTTCAGAAATGAAGGCGCAAGGAGTGGAAGGCGATCGTCTTCAATTACTAAGAGACGTTGGTGGAGCTTTCAGGCCAGGCATATTGACAGCATTGGTTGGTGTCAGTGGTGCAGGTAAGACAACATTAATGGATGTCTTAGCCGGTAGGAAAACTGGAGGGTACATCGAAGGGAGTATAAGCATATCTGGTTACCCAAAGAACCAAACAACATTTGCTAGAGTCAGTGGTTACTGTGAACAAAATGACATCCATTCTCCACATGTTACCGTTTATGAATCCCTCATCTATTCAGCTTGGCTTCGTCTTTCCACCGATATAGACATCAAAACACGAGAGCTGTTTGTTGAAGAAGTAATGGAGTTGGTTGAGCTCAAACCTCTTAGAAACTCTATAGTTGGCCTTCCTGGAGTAGATGGTCTTTCAACCGAACAGAGGAAGAGGCTTACTATTGCGGTTGAATTGGTAGCTAACCCATCAATAATCTTCATGGATGAACCAACATCTGGTCTTGATGCAAGAGCTGCCGCTATTGTTATGCGTACTGTTAGGAATACCGTTGATACAGGGAGGACTGTTGTCTGTACAATTCACCAGCCTAGCATCGACATTTTCGAATCATTCGATGAGCTTTTGTTGATGAAACGTGGAGGCCAAGTTATATATGCTGGAAGTCTAGGGCATCACTCTCAGAAACTAGTTGAATATTTTGAGGCTGTTGAAGGGGTTCCAAAGATCAATGACGGATACAATCCTGCGACGTGGATGCTTGACGTTACTACTCCTTCAATGGAGTCACAAATGAGCCTGGACTTTGCTCAAATATTCTCCAACTCCTCTCTTTATCGGAGAAATCAAGAACTCATCAAAGATTTAAGTACTCCACCACCTGGATCAAAGGATGTCTACTTCAAAACAAAGTACGCGCAATCGTTTTCTACTCAAACCAAAGCTTGCTTCTGGAAACAGTATTGGTCATATTGGAGACATCCTCAGTACAATGCCATTCGGTTTCTCATGACAGTGGTCATTGGCGTCTTGTTTGGTCTAATTTTCTGGCAAATAGGAACAAAAACAGAAAACGAACAAGACCTGAATAATTTCTTTGGAGCCATGTACGCTGCTGTATTGTTCCTCGGTGCCTTAAACGCTGCAACAGTTCAGCCCGCAATTGCCATTGAGCGAACGGTCTTTTACCGCGAAAAAGCCGCTGGAATGTACTCCGCCATTCCATATGCAATTTCGCAGGTAGCAGTGGAAATCATGTACAACACGATACAAACCGGAGTTTACACGCTGATTCTATATTCAATGATCGGATGTAACTGGACTATGGCCAAATTCTTGTGGTTCTACTACTACATGTTAACAAGCTTCATCTACTTTACGCTATACGGTATGATGCTTATGGCCTTGACACCAAACTATCAGATTGCCGGAATCTGCATGTCCTTCTTCCTCAGTCTTTGGAACCTCTTCTCCGGTTTCCTCATCCCCAGACCGCAAATACCTATATGGTGGAGATGGTACTACTGGGCAACACCTGTGGCTTGGACATTGTATGGACTCATCACATCTCAAGTAGGAGACAAGGATTCAATGGTGCACATTAGTGGAATCGGAGACATAGATCTCAAAACGTTGCTCAAAGAAGGATTTGGGTTTGAACATGACTTCTTACCAGTTGTAGCAGTTGTTCACATCGCTTGGATCTTACTCTTTCTCTTTGTCTTCGCCTATGGTATCAAGTTTCTCAACTTCCAAAGAAGGTGA

Protein Analysis

1454

Amino Acids

165.19

Weight (kDa)

6.86

Isoelectric Point (pI)

39.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 117 - 166 4.8e-09 ABC-transporter N-terminal
ABC_tran PF00005 191 - 372 3e-13 ABC transporter
ABC2_membrane_7 PF19055 406 - 459 7.8e-06 ABC-2 type transporter
ABC2_membrane PF01061 527 - 739 9.3e-50 ABC-2 type transporter
PDR_assoc PF08370 744 - 810 4e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 882 - 1033 5e-20 ABC transporter
ABC2_membrane PF01061 1178 - 1391 5.4e-58 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1428
Acc36I ACCTGC 4 cut(s) 1099, 1885, 2696, 3829
Acc65I GGTACC 2 cut(s) 846, 1715
AccB1I GGYRCC 3 cut(s) 846, 1715, 3731
AccB7I CCANNNNNTGG 2 cut(s) 3098, 3482
AccI GTMKAC 2 cut(s) 1281, 3498
AccII CGCG 4 cut(s) 729, 2264, 3518, 3792
AclI AACGTT 3 cut(s) 1302, 2084, 4232
AclWI GGATC 3 cut(s) 23, 3493, 4310
AcoI YGGCCR 2 cut(s) 3, 3927
AcsI RAATTY 4 cut(s) 1152, 1499, 2213, 3932
AcuI CTGAAG 3 cut(s) 1479, 1910, 2580
AcyI GRCGYC 1 cut(s) 3627
AfeI AGCGCT 1 cut(s) 477
AflII CTTAAG 1 cut(s) 977
AflIII ACRYGT 3 cut(s) 749, 2854, 3954
AhlI ACTAGT 3 cut(s) 1174, 1543, 3289
AjiI CACGTC 2 cut(s) 750, 3354
AjnI CCWGG 4 cut(s) 2668, 2998, 3399, 3481
AjuI GAANNNNNNNTTGG 4 cut(s) 1695, 1727, 3533, 3565
AleI CACNNNNGTG 1 cut(s) 4203
AloI GAACNNNNNNTCC 6 cut(s) 393, 425, 1832, 1864, 4055, 4087
Alw21I GWGCWC 5 cut(s) 183, 1102, 1581, 2967, 4200
Alw26I GTCTC 6 cut(s) 1014, 1223, 2640, 3571, 4173, 4209
Alw44I GTGCAC 1 cut(s) 4196
AlwI GGATC 3 cut(s) 23, 3493, 4310
Aor51HI AGCGCT 1 cut(s) 477
ApaLI GTGCAC 1 cut(s) 4196
ApeKI GCWGC 5 cut(s) 1538, 1967, 3116, 3713, 3743
ApoI RAATTY 4 cut(s) 1152, 1499, 2213, 3932
ArsI GACNNNNNNTTYG 4 cut(s) 125, 157, 764, 796
AseI ATTAAT 1 cut(s) 2720
Asp700I GAANNNNTTC 4 cut(s) 363, 3318, 3692, 4067
Asp718I GGTACC 2 cut(s) 846, 1715
AspLEI GCGC 3 cut(s) 478, 2611, 3520
AspS9I GGNCC 7 cut(s) 623, 1088, 1270, 1289, 1390, 2017, 2516
AsuC2I CCSGG 3 cut(s) 1480, 1820, 2297
AsuHPI GGTGA 3 cut(s) 490, 808, 3176
AsuII TTCGAA 1 cut(s) 3207
AsuNHI GCTAGC 1 cut(s) 1990
AvaII GGWCC 3 cut(s) 623, 1088, 1390
AxyI CCTNAGG 1 cut(s) 303
BaeGI GKGCMC 1 cut(s) 4200
BalI TGGCCA 1 cut(s) 3929
BanI GGYRCC 3 cut(s) 846, 1715, 3731
BanII GRGCYC 4 cut(s) 183, 1102, 1581, 2967
BauI CACGAG 1 cut(s) 2925
BbsI GAAGAC 3 cut(s) 357, 2624, 4315
Bbv12I GWGCWC 5 cut(s) 183, 1102, 1581, 2967, 4200
BbvI GCAGC 5 cut(s) 1525, 1954, 3103, 3700, 3730
BccI CCATC 9 cut(s) 180, 553, 607, 1721, 2008, 2223, 3002, 3076, 4110
BcgI CGANNNNNNTGC 2 cut(s) 3340, 3374
BciT130I CCWGG 4 cut(s) 2670, 3000, 3401, 3483
BciVI GTATCC 1 cut(s) 3332
BclI TGATCA 1 cut(s) 1764
BcnI CCSGG 3 cut(s) 1480, 1820, 2297
BcoDI GTCTC 6 cut(s) 1014, 1223, 2640, 3571, 4173, 4209
BcuI ACTAGT 3 cut(s) 1174, 1543, 3289
BfmI CTRYAG 2 cut(s) 2424, 2985
BfoI RGCGCY 1 cut(s) 479
BfrI CTTAAG 1 cut(s) 977
BfuAI ACCTGC 4 cut(s) 1099, 1885, 2696, 3829
BfuI GTATCC 1 cut(s) 3332
BglII AGATCT 1 cut(s) 4222
BmcAI AGTACT 2 cut(s) 1468, 3472
Bme1390I CCNGG 7 cut(s) 1480, 1820, 2297, 2670, 3000, 3401, 3483
Bme18I GGWCC 3 cut(s) 623, 1088, 1390
BmgBI CACGTC 2 cut(s) 750, 3354
BmgT120I GGNCC 7 cut(s) 623, 1088, 1270, 1289, 1390, 2017, 2516
BmrFI CCNGG 7 cut(s) 1480, 1820, 2297, 2670, 3000, 3401, 3483
BmrI ACTGGG 2 cut(s) 1582, 4135
BmsI GCATC 7 cut(s) 904, 2265, 3097, 3204, 3283, 3348, 3984
BmtI GCTAGC 1 cut(s) 1994
BmuI ACTGGG 2 cut(s) 1582, 4135
BoxI GACNNNNGTC 2 cut(s) 3170, 3617
BpiI GAAGAC 3 cut(s) 357, 2624, 4315
BplI GAGNNNNNCTC 2 cut(s) 3568, 3600
BpmI CTGGAG 4 cut(s) 671, 1038, 2769, 3021
Bpu10I CCTNAGC 1 cut(s) 634
Bpu14I TTCGAA 1 cut(s) 3207
BpuEI CTTGAG 3 cut(s) 293, 1328, 4155
BpuMI CCSGG 3 cut(s) 1480, 1820, 2297
BsaAI YACGTR 3 cut(s) 227, 371, 1938
BsaBI GATNNNNATC 2 cut(s) 27, 1661
BsaHI GRCGYC 1 cut(s) 3627
BsaJI CCNNGG 9 cut(s) 1266, 1285, 1292, 1859, 2038, 2147, 2296, 2467, 3727
BsaWI WCCGGW 3 cut(s) 31, 3875, 4073
BsaXI ACNNNNNCTCC 8 cut(s) 43, 73, 142, 172, 3234, 3264, 4055, 4085
Bse118I RCCGGY 1 cut(s) 2735
Bse1I ACTGG 9 cut(s) 72, 813, 850, 1577, 2324, 2752, 3923, 4130, 4274
Bse21I CCTNAGG 1 cut(s) 303
Bse3DI GCAATG 3 cut(s) 15, 930, 2090
Bse8I GATNNNNATC 2 cut(s) 27, 1661
BseBI CCWGG 4 cut(s) 2670, 3000, 3401, 3483
BseDI CCNNGG 9 cut(s) 1266, 1285, 1292, 1859, 2038, 2147, 2296, 2467, 3727
BseJI GATNNNNATC 2 cut(s) 27, 1661
BseMI GCAATG 3 cut(s) 15, 930, 2090
BseMII CTCAG 5 cut(s) 648, 852, 3296, 3599, 4066
BseNI ACTGG 9 cut(s) 72, 813, 850, 1577, 2324, 2752, 3923, 4130, 4274
BseRI GAGGAG 2 cut(s) 163, 3418
BseSI GKGCMC 1 cut(s) 4200
BseXI GCAGC 5 cut(s) 1525, 1954, 3103, 3700, 3730
BseYI CCCAGC 1 cut(s) 665
BsgI GTGCAG 2 cut(s) 1524, 2724
Bsh1236I CGCG 4 cut(s) 729, 2264, 3518, 3792
Bsh1285I CGRYCG 3 cut(s) 36, 2147, 2629
BshNI GGYRCC 3 cut(s) 846, 1715, 3731
BsiEI CGRYCG 3 cut(s) 36, 2147, 2629
BsiHKAI GWGCWC 5 cut(s) 183, 1102, 1581, 2967, 4200
BsiSI CCGG 9 cut(s) 32, 1479, 1820, 1981, 2296, 2736, 3876, 4029, 4074
BslFI GGGAC 5 cut(s) 834, 1310, 1853, 2158, 2223
BsmAI GTCTC 6 cut(s) 1014, 1223, 2640, 3571, 4173, 4209
BsmBI CGTCTC 2 cut(s) 1014, 2640
BsmFI GGGAC 5 cut(s) 834, 1310, 1853, 2158, 2223
BsmI GAATGC 4 cut(s) 519, 917, 1799, 2561
Bsp119I TTCGAA 1 cut(s) 3207
Bsp1286I GDGCHC 5 cut(s) 183, 1102, 1581, 2967, 4200
Bsp1407I TGTACA 2 cut(s) 3176, 3858
Bsp143I GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
Bsp19I CCATGG 1 cut(s) 1859
Bsp68I TCGCGA 1 cut(s) 729
BspCNI CTCAG 5 cut(s) 647, 853, 3295, 3598, 4065
BspFNI CGCG 4 cut(s) 729, 2264, 3518, 3792
BspHI TCATGA 4 cut(s) 718, 921, 1164, 3609
BspMI ACCTGC 4 cut(s) 1099, 1885, 2696, 3829
BspOI GCTAGC 1 cut(s) 1994
BspPI GGATC 3 cut(s) 23, 3493, 4310
BspQI GCTCTTC 1 cut(s) 1586
BspT104I TTCGAA 1 cut(s) 3207
BspT107I GGYRCC 3 cut(s) 846, 1715, 3731
BspTI CTTAAG 1 cut(s) 977
BsrDI GCAATG 3 cut(s) 15, 930, 2090
BsrFI RCCGGY 1 cut(s) 2735
BsrGI TGTACA 2 cut(s) 3176, 3858
BsrI ACTGG 9 cut(s) 72, 813, 850, 1577, 2324, 2752, 3923, 4130, 4274
BssAI RCCGGY 1 cut(s) 2735
BssECI CCNNGG 9 cut(s) 1266, 1285, 1292, 1859, 2038, 2147, 2296, 2467, 3727
BssMI GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
BssNI GRCGYC 1 cut(s) 3627
BssSI CACGAG 1 cut(s) 2925
BssT1I CCWWGG 3 cut(s) 1285, 1859, 2038
Bst2BI CACGAG 1 cut(s) 2925
Bst2UI CCWGG 4 cut(s) 2670, 3000, 3401, 3483
Bst6I CTCTTC 7 cut(s) 494, 879, 1027, 1586, 2378, 3026, 4073
BstACI GRCGYC 1 cut(s) 3627
BstAFI CTTAAG 1 cut(s) 977
BstAPI GCANNNNNTGC 1 cut(s) 3116
BstAUI TGTACA 2 cut(s) 3176, 3858
BstBAI YACGTR 3 cut(s) 227, 371, 1938
BstBI TTCGAA 1 cut(s) 3207
BstC8I GCNNGC 4 cut(s) 1591, 1992, 3547, 3759
BstDSI CCRYGG 4 cut(s) 1292, 1859, 2147, 2467
BstEII GGTNACC 1 cut(s) 2783
BstFNI CGCG 4 cut(s) 729, 2264, 3518, 3792
BstH2I RGCGCY 1 cut(s) 479
BstHHI GCGC 3 cut(s) 478, 2611, 3520
BstKTI GATC 9 cut(s) 31, 220, 1767, 2629, 3330, 3488, 3909, 4225, 4305
BstMAI GTCTC 6 cut(s) 1014, 1223, 2640, 3571, 4173, 4209
BstMBI GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
BstMCI CGRYCG 3 cut(s) 36, 2147, 2629
BstMWI GCNNNNNNNGC 7 cut(s) 473, 1796, 1877, 1964, 3116, 3710, 3740
BstNI CCWGG 4 cut(s) 2670, 3000, 3401, 3483
BstNSI RCATGY 5 cut(s) 1593, 1712, 2858, 3958, 4042
BstPAI GACNNNNGTC 2 cut(s) 3170, 3617
BstPI GGTNACC 1 cut(s) 2783
BstSCI CCNGG 7 cut(s) 1478, 1818, 2295, 2668, 2998, 3399, 3481
BstSFI CTRYAG 2 cut(s) 2424, 2985
BstSLI GKGCMC 1 cut(s) 4200
BstSNI TACGTA 2 cut(s) 227, 1938
BstUI CGCG 4 cut(s) 729, 2264, 3518, 3792
BstV1I GCAGC 5 cut(s) 1525, 1954, 3103, 3700, 3730
BstV2I GAAGAC 3 cut(s) 357, 2624, 4315
BstX2I RGATCY 3 cut(s) 28, 4222, 4302
BstYI RGATCY 3 cut(s) 28, 4222, 4302
Bsu36I CCTNAGG 1 cut(s) 303
BsuI GTATCC 1 cut(s) 3332
BtgI CCRYGG 4 cut(s) 1292, 1859, 2147, 2467
BtgZI GCGATG 1 cut(s) 4279
BtrI CACGTC 2 cut(s) 750, 3354
BtsI GCAGTG 1 cut(s) 3852
BtsIMutI CAGTG 6 cut(s) 450, 1812, 2704, 2824, 3621, 3852
BtuMI TCGCGA 1 cut(s) 729
BveI ACCTGC 4 cut(s) 1099, 1885, 2696, 3829
Cac8I GCNNGC 4 cut(s) 1591, 1992, 3547, 3759
CciI TCATGA 4 cut(s) 718, 921, 1164, 3609
CfoI GCGC 3 cut(s) 478, 2611, 3520
Cfr10I RCCGGY 1 cut(s) 2735
Cfr13I GGNCC 7 cut(s) 623, 1088, 1270, 1289, 1390, 2017, 2516
CseI GACGC 2 cut(s) 1049, 3616
CspCI CAANNNNNGTGG 2 cut(s) 4119, 4154
DpnI GATC 9 cut(s) 30, 219, 1766, 2628, 3329, 3487, 3908, 4224, 4304
DpnII GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
EaeI YGGCCR 2 cut(s) 3, 3927
Eam1104I CTCTTC 7 cut(s) 494, 879, 1027, 1586, 2378, 3026, 4073
EarI CTCTTC 7 cut(s) 494, 879, 1027, 1586, 2378, 3026, 4073
EciI GGCGGA 1 cut(s) 3805
Ecl136II GAGCTC 4 cut(s) 181, 1100, 1579, 2965
Eco105I TACGTA 2 cut(s) 227, 1938
Eco130I CCWWGG 3 cut(s) 1285, 1859, 2038
Eco24I GRGCYC 4 cut(s) 183, 1102, 1581, 2967
Eco32I GATATC 1 cut(s) 580
Eco47I GGWCC 3 cut(s) 623, 1088, 1390
Eco47III AGCGCT 1 cut(s) 477
Eco53kI GAGCTC 4 cut(s) 181, 1100, 1579, 2965
Eco57I CTGAAG 3 cut(s) 1479, 1910, 2580
Eco81I CCTNAGG 1 cut(s) 303
Eco91I GGTNACC 1 cut(s) 2783
EcoICRI GAGCTC 4 cut(s) 181, 1100, 1579, 2965
EcoO109I RGGNCCY 1 cut(s) 1088
EcoO65I GGTNACC 1 cut(s) 2783
EcoRI GAATTC 1 cut(s) 1499
EcoRII CCWGG 4 cut(s) 2668, 2998, 3399, 3481
EcoRV GATATC 1 cut(s) 580
EcoT14I CCWWGG 3 cut(s) 1285, 1859, 2038
EcoT22I ATGCAT 2 cut(s) 919, 1710
EcoT38I GRGCYC 4 cut(s) 183, 1102, 1581, 2967
ErhI CCWWGG 3 cut(s) 1285, 1859, 2038
Esp3I CGTCTC 2 cut(s) 1014, 2640
FalI AAGNNNNNCTT 2 cut(s) 595, 627
FaqI GGGAC 5 cut(s) 834, 1310, 1853, 2158, 2223
FauI CCCGC 2 cut(s) 2261, 3766
FauNDI CATATG 1 cut(s) 3826
FbaI TGATCA 1 cut(s) 1764
FblI GTMKAC 2 cut(s) 1281, 3498
FriOI GRGCYC 4 cut(s) 183, 1102, 1581, 2967
GlaI GCGC 3 cut(s) 477, 2610, 3519
GsaI CCCAGC 1 cut(s) 669
GsuI CTGGAG 4 cut(s) 671, 1038, 2769, 3021
HaeII RGCGCY 1 cut(s) 479
HapII CCGG 9 cut(s) 32, 1479, 1820, 1981, 2296, 2736, 3876, 4029, 4074
HgaI GACGC 2 cut(s) 1049, 3616
HhaI GCGC 3 cut(s) 478, 2611, 3520
Hin1I GRCGYC 1 cut(s) 3627
Hin6I GCGC 3 cut(s) 476, 2609, 3518
HinP1I GCGC 3 cut(s) 476, 2609, 3518
HincII GTYRAC 2 cut(s) 767, 3960
HindII GTYRAC 2 cut(s) 767, 3960
HindIII AAGCTT 4 cut(s) 103, 657, 3543, 3964
HpaI GTTAAC 1 cut(s) 3960
HpaII CCGG 9 cut(s) 32, 1479, 1820, 1981, 2296, 2736, 3876, 4029, 4074
HphI GGTGA 3 cut(s) 490, 808, 3176
Hpy99I CGWCG 4 cut(s) 162, 214, 253, 3355
HpyF10VI GCNNNNNNNGC 7 cut(s) 473, 1796, 1877, 1964, 3116, 3710, 3740
Hsp92I GRCGYC 1 cut(s) 3627
HspAI GCGC 3 cut(s) 476, 2609, 3518
KpnI GGTACC 2 cut(s) 850, 1719
Ksp22I TGATCA 1 cut(s) 1764
KspAI GTTAAC 1 cut(s) 3960
Kzo9I GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
LguI GCTCTTC 1 cut(s) 1586
Lsp1109I GCAGC 5 cut(s) 1525, 1954, 3103, 3700, 3730
LweI GCATC 7 cut(s) 904, 2265, 3097, 3204, 3283, 3348, 3984
MalI GATC 9 cut(s) 30, 219, 1766, 2628, 3329, 3487, 3908, 4224, 4304
MboI GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
MfeI CAATTG 1 cut(s) 3762
MflI RGATCY 3 cut(s) 28, 4222, 4302
MhlI GDGCHC 5 cut(s) 183, 1102, 1581, 2967, 4200
MlsI TGGCCA 1 cut(s) 3929
MluNI TGGCCA 1 cut(s) 3929
MlyI GAGTC 3 cut(s) 2823, 3395, 4152
MmeI TCCRAC 6 cut(s) 16, 70, 817, 1110, 2254, 3447
Mox20I TGGCCA 1 cut(s) 3929
Mph1103I ATGCAT 2 cut(s) 919, 1710
MroXI GAANNNNTTC 4 cut(s) 363, 3318, 3692, 4067
MscI TGGCCA 1 cut(s) 3929
MseI TTAA 7 cut(s) 978, 1779, 2496, 2720, 3467, 3737, 3959
MslI CAYNNNNRTG 3 cut(s) 1808, 3614, 4203
Msp20I TGGCCA 1 cut(s) 3929
MspA1I CMGCKG 3 cut(s) 585, 1967, 3803
MspCI CTTAAG 1 cut(s) 977
MspI CCGG 9 cut(s) 32, 1479, 1820, 1981, 2296, 2736, 3876, 4029, 4074
MspR9I CCNGG 7 cut(s) 1480, 1820, 2297, 2670, 3000, 3401, 3483
MunI CAATTG 1 cut(s) 3762
Mva1269I GAATGC 4 cut(s) 519, 917, 1799, 2561
MvaI CCWGG 4 cut(s) 2670, 3000, 3401, 3483
MvnI CGCG 4 cut(s) 729, 2264, 3518, 3792
MwoI GCNNNNNNNGC 7 cut(s) 473, 1796, 1877, 1964, 3116, 3710, 3740
NciI CCSGG 3 cut(s) 1480, 1820, 2297
NcoI CCATGG 1 cut(s) 1859
NdeI CATATG 1 cut(s) 3826
NdeII GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
NheI GCTAGC 1 cut(s) 1990
NmuCI GTSAC 5 cut(s) 74, 496, 1192, 1546, 3387
NruI TCGCGA 1 cut(s) 729
NsiI ATGCAT 2 cut(s) 919, 1710
NspI RCATGY 5 cut(s) 1593, 1712, 2858, 3958, 4042
NspV TTCGAA 1 cut(s) 3207
OliI CACNNNNGTG 1 cut(s) 4203
PaeI GCATGC 1 cut(s) 1593
PagI TCATGA 4 cut(s) 718, 921, 1164, 3609
PciI ACATGT 2 cut(s) 2854, 3954
PciSI GCTCTTC 1 cut(s) 1586
PcsI WCGNNNNNNNCGW 3 cut(s) 1193, 3204, 3213
PctI GAATGC 4 cut(s) 519, 917, 1799, 2561
PdmI GAANNNNTTC 4 cut(s) 363, 3318, 3692, 4067
PflFI GACNNNGTC 1 cut(s) 825
PflMI CCANNNNNTGG 2 cut(s) 3098, 3482
PfoI TCCNGGA 1 cut(s) 2998
Ple19I CGATCG 1 cut(s) 2629
PleI GAGTC 3 cut(s) 2822, 3394, 4152
PpsI GAGTC 3 cut(s) 2822, 3394, 4152
Ppu21I YACGTR 3 cut(s) 227, 371, 1938
PpuMI RGGWCCY 1 cut(s) 1088
PscI ACATGT 2 cut(s) 2854, 3954
PshAI GACNNNNGTC 2 cut(s) 3170, 3617
PshBI ATTAAT 1 cut(s) 2720
PsiI TTATAA 1 cut(s) 1428
Psp124BI GAGCTC 4 cut(s) 183, 1102, 1581, 2967
Psp1406I AACGTT 3 cut(s) 1302, 2084, 4232
Psp5II RGGWCCY 1 cut(s) 1088
Psp6I CCWGG 4 cut(s) 2668, 2998, 3399, 3481
PspEI GGTNACC 1 cut(s) 2783
PspFI CCCAGC 1 cut(s) 665
PspGI CCWGG 4 cut(s) 2668, 2998, 3399, 3481
PspPI GGNCC 7 cut(s) 623, 1088, 1270, 1289, 1390, 2017, 2516
PspPPI RGGWCCY 1 cut(s) 1088
PsrI GAACNNNNNNTAC 2 cut(s) 4272, 4304
PsuI RGATCY 3 cut(s) 28, 4222, 4302
PsyI GACNNNGTC 1 cut(s) 825
PvuI CGATCG 1 cut(s) 2629
RruI TCGCGA 1 cut(s) 729
RseI CAYNNNNRTG 3 cut(s) 1808, 3614, 4203
SacI GAGCTC 4 cut(s) 183, 1102, 1581, 2967
SapI GCTCTTC 1 cut(s) 1586
SaqAI TTAA 7 cut(s) 978, 1779, 2496, 2720, 3467, 3737, 3959
Sau3AI GATC 9 cut(s) 28, 217, 1764, 2626, 3327, 3485, 3906, 4222, 4302
Sau96I GGNCC 7 cut(s) 623, 1088, 1270, 1289, 1390, 2017, 2516
ScaI AGTACT 2 cut(s) 1468, 3472
SchI GAGTC 3 cut(s) 2823, 3395, 4152
ScrFI CCNGG 7 cut(s) 1480, 1820, 2297, 2670, 3000, 3401, 3483
SduI GDGCHC 5 cut(s) 183, 1102, 1581, 2967, 4200
SfaNI GCATC 7 cut(s) 904, 2265, 3097, 3204, 3283, 3348, 3984
SfcI CTRYAG 2 cut(s) 2424, 2985
SfuI TTCGAA 1 cut(s) 3207
SinI GGWCC 3 cut(s) 623, 1088, 1390
SmiMI CAYNNNNRTG 3 cut(s) 1808, 3614, 4203
SmlI CTYRAG 4 cut(s) 272, 977, 1307, 4170
SmoI CTYRAG 4 cut(s) 272, 977, 1307, 4170
SnaBI TACGTA 2 cut(s) 227, 1938
SpeI ACTAGT 3 cut(s) 1174, 1543, 3289
SphI GCATGC 1 cut(s) 1593
SspI AATATT 3 cut(s) 439, 3299, 3417
SstI GAGCTC 4 cut(s) 183, 1102, 1581, 2967
StyD4I CCNGG 7 cut(s) 1478, 1818, 2295, 2668, 2998, 3399, 3481
StyI CCWWGG 3 cut(s) 1285, 1859, 2038
TatI WGTACW 7 cut(s) 973, 1466, 3176, 3470, 3588, 3810, 3858
TauI GCSGC 7 cut(s) 8, 194, 244, 588, 1461, 3122, 3803
Tru1I TTAA 7 cut(s) 978, 1779, 2496, 2720, 3467, 3737, 3959
Tru9I TTAA 7 cut(s) 978, 1779, 2496, 2720, 3467, 3737, 3959
TscAI CASTG 6 cut(s) 450, 1812, 2704, 2824, 3621, 3852
TseFI GTSAC 5 cut(s) 74, 496, 1192, 1546, 3387
TseI GCWGC 5 cut(s) 1538, 1967, 3116, 3713, 3743
Tsp45I GTSAC 5 cut(s) 74, 496, 1192, 1546, 3387
TspGWI ACGGA 3 cut(s) 1429, 2324, 3351
TspRI CASTG 6 cut(s) 450, 1812, 2704, 2824, 3621, 3852
Tth111I GACNNNGTC 1 cut(s) 825
Van91I CCANNNNNTGG 2 cut(s) 3098, 3482
Vha464I CTTAAG 1 cut(s) 977
VneI GTGCAC 1 cut(s) 4196
VpaK11BI GGWCC 3 cut(s) 623, 1088, 1390
VspI ATTAAT 1 cut(s) 2720
XapI RAATTY 4 cut(s) 1152, 1499, 2213, 3932
XbaI TCTAGA 1 cut(s) 991
XceI RCATGY 5 cut(s) 1593, 1712, 2858, 3958, 4042
XcmI CCANNNNNNNNNTGG 1 cut(s) 2322
XmiI GTMKAC 2 cut(s) 1281, 3498
XmnI GAANNNNTTC 4 cut(s) 363, 3318, 3692, 4067
ZrmI AGTACT 2 cut(s) 1468, 3472
Zsp2I ATGCAT 2 cut(s) 919, 1710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.