pycom14g01620
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
1205933 .. 1206786
854 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g01620.3

Sequence Viewer

Length: 489 bp
ATGATTGACAAGTTATCCCCCCTTTTTTTGCAGGTGGCTATAGAGACGGTCTATTTTGCAATCCAAACATTTATATATACACTTCTTCTCTTCTCCATGATTGGATTCAAGTGGAAAGATGGTGGTTGCACTCACTCCGGGCCCCAGATTGCTGTCATTGTCATGTCCTTCTTCCTCTGTTTCTGGAACTTGTTTTCCGGCTTCCTCATTCCAAGACCGCAAATACCAATCTGGTGGAGGTGGAACTACTGGGCTTCCCCTGTGGCCTGGACAGTTTATGGCCTTGTGACATCCCAAGTGGGTGACAAGAATGCTGACCTTATCCTGCCTGGATATGGCACCATGCCATTGAAGAAGTTCCTGAAAGATGACTTTGGTTTTGAGTATGACTTCCTTCCGGCCGTCGCCGCGGCACACGTCGGCTGGGTTCTTCTTTTCTTCTTTGTGTTTGCCTATGGCATCAAGTTCCTCAACTTCCAAAGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

163

Amino Acids

18.78

Weight (kDa)

8.91

Isoelectric Point (pI)

32.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 22
Acc36I ACCTGC 1 cut(s) 22
AccB1I GGYRCC 1 cut(s) 338
AccII CGCG 1 cut(s) 410
AciI CCGC 3 cut(s) 218, 408, 410
AcoI YGGCCR 1 cut(s) 399
AfiI CCNNNNNNNGG 1 cut(s) 335
AflIII ACRYGT 1 cut(s) 415
AgsI TTSAA 2 cut(s) 109, 352
AjiI CACGTC 1 cut(s) 418
AjnI CCWGG 2 cut(s) 266, 328
AloI GAACNNNNNNTCC 2 cut(s) 179, 211
Alw26I GTCTC 1 cut(s) 38
AoxI GGCC 4 cut(s) 140, 264, 280, 399
ApaI GGGCCC 1 cut(s) 144
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
Asp700I GAANNNNTTC 1 cut(s) 356
AspS9I GGNCC 2 cut(s) 140, 141
AsuC2I CCSGG 1 cut(s) 139
AsuHPI GGTGA 1 cut(s) 314
BaeGI GKGCMC 1 cut(s) 144
BanI GGYRCC 1 cut(s) 338
BanII GRGCYC 1 cut(s) 144
BccI CCATC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 386
BciT130I CCWGG 2 cut(s) 268, 330
BcnI CCSGG 1 cut(s) 139
BcoDI GTCTC 1 cut(s) 38
BfmI CTRYAG 1 cut(s) 39
BfuAI ACCTGC 1 cut(s) 22
BisI GCNGC 2 cut(s) 408, 411
BlsI GCNGC 2 cut(s) 409, 412
Bme1390I CCNGG 3 cut(s) 139, 268, 330
BmgBI CACGTC 1 cut(s) 418
BmgT120I GGNCC 2 cut(s) 140, 141
BmiI GGNNCC 3 cut(s) 142, 143, 340
BmrFI CCNGG 3 cut(s) 139, 268, 330
BmrI ACTGGG 1 cut(s) 259
BmsI GCATC 1 cut(s) 468
BmuI ACTGGG 1 cut(s) 259
BpuMI CCSGG 1 cut(s) 139
BsaJI CCNNGG 1 cut(s) 408
Bsc4I CCNNNNNNNGG 1 cut(s) 335
Bse1I ACTGG 1 cut(s) 254
BseBI CCWGG 2 cut(s) 268, 330
BseDI CCNNGG 1 cut(s) 408
BseGI GGATG 1 cut(s) 290
BseLI CCNNNNNNNGG 1 cut(s) 335
BseNI ACTGG 1 cut(s) 254
BseSI GKGCMC 1 cut(s) 144
BseX3I CGGCCG 1 cut(s) 399
BseYI CCCAGC 1 cut(s) 423
Bsh1236I CGCG 1 cut(s) 410
Bsh1285I CGRYCG 1 cut(s) 402
BshFI GGCC 4 cut(s) 142, 266, 282, 401
BshNI GGYRCC 1 cut(s) 338
BsiEI CGRYCG 1 cut(s) 402
BsiSI CCGG 3 cut(s) 138, 198, 398
BslI CCNNNNNNNGG 1 cut(s) 335
BsmAI GTCTC 1 cut(s) 38
BsmBI CGTCTC 1 cut(s) 38
BsmI GAATGC 1 cut(s) 316
BsnI GGCC 4 cut(s) 142, 266, 282, 401
Bsp120I GGGCCC 1 cut(s) 140
Bsp1286I GDGCHC 1 cut(s) 144
BspACI CCGC 3 cut(s) 218, 408, 410
BspANI GGCC 4 cut(s) 142, 266, 282, 401
BspFNI CGCG 1 cut(s) 410
BspLI GGNNCC 3 cut(s) 142, 143, 340
BspMI ACCTGC 1 cut(s) 22
BspT107I GGYRCC 1 cut(s) 338
BsrI ACTGG 1 cut(s) 254
BssECI CCNNGG 1 cut(s) 408
Bst2UI CCWGG 2 cut(s) 268, 330
Bst4CI ACNGT 2 cut(s) 49, 274
Bst6I CTCTTC 1 cut(s) 95
BstDSI CCRYGG 1 cut(s) 408
BstF5I GGATG 1 cut(s) 290
BstFNI CGCG 1 cut(s) 410
BstMAI GTCTC 1 cut(s) 38
BstMCI CGRYCG 1 cut(s) 402
BstMWI GCNNNNNNNGC 1 cut(s) 407
BstNI CCWGG 2 cut(s) 268, 330
BstSCI CCNGG 3 cut(s) 137, 266, 328
BstSFI CTRYAG 1 cut(s) 39
BstSLI GKGCMC 1 cut(s) 144
BstUI CGCG 1 cut(s) 410
BstXI CCANNNNNNTGG 1 cut(s) 234
BstZI CGGCCG 1 cut(s) 399
BsuRI GGCC 4 cut(s) 142, 266, 282, 401
BtgI CCRYGG 1 cut(s) 408
BtrI CACGTC 1 cut(s) 418
BtsCI GGATG 1 cut(s) 290
BveI ACCTGC 1 cut(s) 22
Cfr13I GGNCC 2 cut(s) 140, 141
Cfr42I CCGCGG 1 cut(s) 411
CviAII CATG 3 cut(s) 97, 163, 343
CviJI RGCY 8 cut(s) 38, 142, 201, 254, 266, 282, 401, 423
CviKI_1 RGCY 8 cut(s) 38, 142, 201, 254, 266, 282, 401, 423
EaeI YGGCCR 1 cut(s) 399
EagI CGGCCG 1 cut(s) 399
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
EclXI CGGCCG 1 cut(s) 399
Eco24I GRGCYC 1 cut(s) 144
Eco52I CGGCCG 1 cut(s) 399
EcoO109I RGGNCCY 1 cut(s) 141
EcoRII CCWGG 2 cut(s) 266, 328
EcoT38I GRGCYC 1 cut(s) 144
Esp3I CGTCTC 1 cut(s) 38
FaeI CATG 3 cut(s) 100, 166, 346
FatI CATG 3 cut(s) 96, 162, 342
Fnu4HI GCNGC 2 cut(s) 408, 411
FokI GGATG 1 cut(s) 277
FriOI GRGCYC 1 cut(s) 144
Fsp4HI GCNGC 2 cut(s) 408, 411
GluI GCNGC 2 cut(s) 408, 411
GsaI CCCAGC 1 cut(s) 427
HaeIII GGCC 4 cut(s) 142, 266, 282, 401
HapII CCGG 3 cut(s) 138, 198, 398
Hin1II CATG 3 cut(s) 100, 166, 346
HinfI GANTC 1 cut(s) 105
HpaII CCGG 3 cut(s) 138, 198, 398
HphI GGTGA 1 cut(s) 314
Hpy188III TCNNGA 2 cut(s) 184, 361
Hpy99I CGWCG 2 cut(s) 407, 422
HpyAV CCTTC 2 cut(s) 178, 404
HpyCH4III ACNGT 2 cut(s) 49, 274
HpyCH4IV ACGT 1 cut(s) 417
HpyCH4V TGCA 3 cut(s) 31, 59, 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 407
HpySE526I ACGT 1 cut(s) 417
Hsp92II CATG 3 cut(s) 100, 166, 346
KspI CCGCGG 1 cut(s) 411
LweI GCATC 1 cut(s) 468
MaeII ACGT 1 cut(s) 417
MaeIII GTNAC 2 cut(s) 286, 302
MboII GAAGA 6 cut(s) 77, 82, 163, 364, 422, 430
MhlI GDGCHC 1 cut(s) 144
MnlI CCTC 4 cut(s) 185, 215, 231, 479
MroXI GAANNNNTTC 1 cut(s) 356
MslI CAYNNNNRTG 1 cut(s) 161
MspA1I CMGCKG 1 cut(s) 410
MspI CCGG 3 cut(s) 138, 198, 398
MspR9I CCNGG 3 cut(s) 139, 268, 330
Mva1269I GAATGC 1 cut(s) 316
MvaI CCWGG 2 cut(s) 268, 330
MvnI CGCG 1 cut(s) 410
MwoI GCNNNNNNNGC 1 cut(s) 407
NciI CCSGG 1 cut(s) 139
NlaIII CATG 3 cut(s) 100, 166, 346
NlaIV GGNNCC 3 cut(s) 142, 143, 340
NmuCI GTSAC 2 cut(s) 286, 302
PaqCI CACCTGC 1 cut(s) 22
PctI GAATGC 1 cut(s) 316
PdmI GAANNNNTTC 1 cut(s) 356
PfeI GAWTC 1 cut(s) 105
PkrI GCNGC 2 cut(s) 409, 412
Psp6I CCWGG 2 cut(s) 266, 328
PspFI CCCAGC 1 cut(s) 423
PspGI CCWGG 2 cut(s) 266, 328
PspN4I GGNNCC 3 cut(s) 142, 143, 340
PspOMI GGGCCC 1 cut(s) 140
PspPI GGNCC 2 cut(s) 140, 141
RseI CAYNNNNRTG 1 cut(s) 161
SacII CCGCGG 1 cut(s) 411
SatI GCNGC 2 cut(s) 408, 411
Sau96I GGNCC 2 cut(s) 140, 141
ScrFI CCNGG 3 cut(s) 139, 268, 330
SduI GDGCHC 1 cut(s) 144
SetI ASST 4 cut(s) 36, 242, 321, 420
SfaNI GCATC 1 cut(s) 468
SfcI CTRYAG 1 cut(s) 39
Sfr303I CCGCGG 1 cut(s) 411
SgrBI CCGCGG 1 cut(s) 411
SmiMI CAYNNNNRTG 1 cut(s) 161
SsiI CCGC 3 cut(s) 218, 408, 410
StyD4I CCNGG 3 cut(s) 137, 266, 328
TaaI ACNGT 2 cut(s) 49, 274
TaiI ACGT 1 cut(s) 420
TauI GCSGC 2 cut(s) 410, 413
TfiI GAWTC 1 cut(s) 105
TseFI GTSAC 2 cut(s) 286, 302
Tsp45I GTSAC 2 cut(s) 286, 302
XmnI GAANNNNTTC 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.