Prupe.6G121500_v2.0.a1

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
9034267 .. 9043523
9257 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G121500.1

Sequence Viewer

Length: 4356 bp
ATGGCGGCGTCTTTGGTGGGAGATGACTTAGCTAGGCAGAGTAGCAGCCGGAGGAGCTGGCGTTCTTCCAGTGTTAGAGAAATGTGGAACACACAGGATGTGTTCCAGCAGAGCAGCAGGCAGCAGACGGTGAATGAGGAGGAGGAGCTGAAGTGGGCCGCCATAGAGCGGTTGCCAACGTATGATAGGATGAAAAGGGGGATGCTCAGACAATATATGAGCAATGGGAGGGTTGTAGCTGAAGAAGTTGATGTTGCACACCTTGGAGATCATGACAAGAAACAGTTGATGGAGAGCATACTTAAGGTTGTTGAGGATGACAATGAGAGGTTCTTGAAGAGGCTCAGGGCTAGAAATGACAGGGTTGGTATTGACATTCCAAAGGTTGAGGTTAGATACCAGAATATATCAATAGAGGGAGATGCATATGTTGGCACCAGAGCACTTCCAACTCTGCTAAATTCCACCTTGAACCAACTAGAGGGACTGATTGGATTGATTGGACTCTCACCCTCAAAGAAAAGAGTTGTCAAGATACTTCATGATGTGAGCGGTATTGTTAAACCATCCAGGATGACACTGCTTCTGGGACCGCCATCGTCAGGAAAAACAACAATGCTAAAAGCACTTGCTGGCAAACTGGATAGGGATATAAGGGTAACTGGGAAAGTGACTTACTGTGGCCATGAATTCAATGAATTTGTGCCTCAGAGAACCTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACGTTGGATTTCTCTGGACGTTGCCTGGGAGTTGGAACAAGGTATGATATGCTAGTAGAGATGTCTAGACGAGAGAAAGATTCAGGTGTCAAACCAGATCCAGAAATCGATGCATTCATGAAAGCCACATCTATGTCAGGCAAGGAAACCAGTTTGATCACAGATTATGTTCTTAAGATACTTGGATTAGACATCTGTGCTGATATAATGGTGGGTGATGGCATGCGAAGGGGTATATCTGGTGGACAAAAGAAACGTGTAACTACCGGAGAAATGTTGGTTGGACCAGCGAAAGCTTTTTTCATGGATGAAATATCAACGGGGCTGGACAGTTCCACAACCTTTCAAATTGTCAAGTTCATGAGACAGATGGTTCATATTCTGGATGTGACAATGGTCATCTCTCTCTTGCAGCCTGCACCGGAGACGTATGATCTTTTTGATGACATTATCCTTCTTTCTGAGGGTCAAATTGTGTACCAAGGTCCACGTGAGAATGTGCTTGAATTCTTCGAATATATGGGGTTCAGATGCCCTGAAAGGAAAGGTGTTGCAGATTTCTTGCAAGAAGTGACCTCAAAGAAGGACCAAGAACAATACTGGTATAAGAAGAACCAAGCATACAGATATGTCTCAGTGTCTGACTTTGTACAGGCTTTCAGATCATTTCATGTTGGCCAACGACTTTTGGAAGACCTAAGGGTTCCATATGATAAAAGAGCAGCCCATCCTGCTGCCTTGGTGAAGGAAAAGTATGGAATATCGAATATGGAACTCTTCAAGGCATGCTTTGCAAGAGAATGGCTGCTGATGCAGCGTAACTCTTTTGTATACATATTCAAAACTACCCAGATAACAATTATGGCAACAATTGCTTTCACGGTATTCTTAAGGACAACAATGAAATACGGGGAAGAAAAGGATTCAGCAAGGTTTTGGGGAGCACTGTTTTTCAGTCTCATCAATGTCATGTTTAATGGAGTGGCAGAGCTTCCAATGACAGTTTTCCGGCTTCCTGTGTTCTTTAGGCAGAGGGATGCCTTGTTCTATCCTGGGTGGGCTTTTGGCTTGCCCATTTGGATAACCAGAATTCCCATTTCGCTGATGGAATCTTTTTTATGGACAGCCATAACATATTACACCATAGGATTTGCACCTGCTCCTAGTAGGTTCTTCAAACAGTTCTTGGCTTTCTTTGGTATACATCAGATGGCAGTCTCCCTCTTCCGTTTCATTGCTGGCCTTGGTAGAAGTGAGGTTGTTTCGGGCACAATCGGTTCCTTTTCACTGCTGTTGGTTTTTATTCTAGGAGGTTACATTGTTGCTAAAGATGATATTGAACCATGGATGATATGGGGATACTATGTTTCACCTATGATGTATGGACAAAATGCAATTGCTATCAATGAATTTCTTGACGACAGATGGAGCACTCCTATCAATAACTCCCGTATGCCCACTGTGGGAAAGACCCTTCTCAGGGAGAGAGGCCTGTATACAGAGGAATATTGGTATTGGATTTGTATTGGGGCACTCTTCGCGTTTTCAGTTCTTTTTAATGTTCTTTTCATTGCATCACTCACCTTCTTAAACCCTCTTGGCGAAACCAAAACTCTGATCGAGAATGATGACTCTGAAACAAAGAGGAAACAGCAATTGTCCAATTCAGAAGGTATTGATATGCAAGTTCGAAATGCTCAAGGAAGTAGTAGTTCAAATGTTAATGTTGCAAGCGGTCAAGCCAAACGAGGAATGGTTATGCCCTTCCAGCCCCTTTCACTTGCTTTCAACCATGTTAATTACTATGTGGATATGCCTGTGGAAATGAAGAGCGAAGGGATTGAAGAGACTCGACTGCAACTACTTCGAGATGTCAGTGGTGCATTTAGGCCGGGTATTCTGACTGCATTGGTTGGTGTTAGTGGTGCTGGAAAAACCACCTTGATGGATGTCTTAGCTGGAAGAAAGACTGGCGGGTACATTGAAGGAAGTATTAGTATCTCTGGATACCCAAAGAACCAAGCCACATTTACTCGGGTCAGCGGTTACTGTGAACAGAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTCGTATACTCTGCCTGGCTGCGTCTTTCAAGGGATGCTACGAAGGATAAACGAAAGATGTTTGTTGATGAGGTTATGGATTTGGTCGAGCTTAATCCATTGAGGAATTCTTTAGTTGGACTGCCAGGAGTTGATGGACTTTCAACTGAGCAGAGAAAGAGGCTCACTATTGCTGTAGAGTTGGTTGCAAATCCGTCCATCATCTTTATGGATGAGCCAACATCAGGTCTTGATGCTAGAGCAGCCGCTATTGTTATGCGTGCTGTAAGAAACACAGTTGATACAGGACGAACTGTTGTATGCACAATTCACCAACCGAGTATTGACATTTTTGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAGGTGATTTATGCTGGACCTCTAGGTCATCAGTCTCATGAGCTTGTTGAATATTTTGAGGCTATCCCTGGAGTTCCCAAGATCAAAGAAGGCTACAATCCTGCTACCTGGATGTTAGACGTCAGCTCTGCTGCAGTTGAGGCTCAAAATAACATTGACTTTGCAGAAGTATATGCAAACTCTGAGCTCTACAGGAGAAATGAGGAACTTATCAAGGGACTAAGCATTCCACTACCCGGCTCCAATGACCTTCACTTTCCCACCCAATTTTCTCAAAGCTTCATAGTTCAATGCAAGGCTTGCTTTTGGAAACAACACTGGTCATACTGGAGAAACTCGCGATACAATGCCATTAGGTTTTTCATGACGGCTGTCATTGGCATAATCTTTGGTGTAATCTTCTGGAGCAAAGGAGACTCGCTACATAAACAACAAGACCTGATCAATCTTTTGGGAGCTACCTATTCTGCTGTTCTTTTCCTTGGAGCTGGCAATGCTTCTGCTGTTCAATCCGTGATTGCAATTGAGAGAACAGTTTTCTACCGTGAAAGAGCAGCGGGAATGTATTCAGAGTTGCCTTATGCATTTGCACAGGTGGCTATTGAGACAATTTACGTTGCAATCCAAACCTTTATGTACTCGTGCATTCTGTATTCTATGATTGGGTACACTTGGAAGGTAGAAAAGTTTTTGTACTTCTACTACTTCGTATTCATGTGCTTCACCTACTTCACAATGAATGGAATGATGATGGTTGCACTAACTCCTAACTCTCAAATTGCTGCAATCGTTTCATCTTTCTTCACGAACTTCTGGAACTTGTTCTCTGGTTTCCTCATTGCCCGGCCGCTAATCCCAGTGTGGTGGAGGTGGTACTACTGGGGGTCTCCAATTGCTTGGACAATTTATGGCATCATGGCATCTCAATTTGGTGACGTTAAGACCTTTATTGATACTCCTGAAGGATCTCAGAGAGTGGATCTATACCTTAAGAAAAATCTAGGTTATGAACATGACTTTGTAGTACCTGTGTTCTTCGCTCATATAGGTTGGGTCCTGCTCTTCTTCTTTGTCTTTGCCTATGGTATCAAGTTCCTTAACTTCCAAAAGAGATAA

Protein Analysis

1452

Amino Acids

165.07

Weight (kDa)

8.14

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1936
AasI GACNNNNNNGTC 1 cut(s) 3264
AatII GACGTC 1 cut(s) 3363
Acc36I ACCTGC 1 cut(s) 1936
AccB1I GGYRCC 1 cut(s) 434
AccBSI CCGCTC 2 cut(s) 169, 552
AccI GTMKAC 4 cut(s) 1602, 1972, 2267, 2874
AccII CGCG 2 cut(s) 2312, 3580
AclI AACGTT 1 cut(s) 773
AclWI GGATC 3 cut(s) 863, 4213, 4227
AcoI YGGCCR 3 cut(s) 682, 1447, 4085
AcsI RAATTY 7 cut(s) 460, 689, 698, 1277, 1860, 2180, 2974
AcuI CTGAAG 3 cut(s) 170, 261, 4221
AcvI CACGTG 1 cut(s) 1262
AcyI GRCGYC 2 cut(s) 8, 3360
AfaI GTAC 8 cut(s) 1250, 1422, 2750, 3878, 3908, 3935, 4115, 4266
AfiI CCNNNNNNNGG 8 cut(s) 168, 481, 602, 2234, 2250, 2251, 3092, 3476
AflII CTTAAG 4 cut(s) 302, 944, 1660, 4229
AflIII ACRYGT 1 cut(s) 1027
AjnI CCWGG 7 cut(s) 569, 795, 1822, 2882, 2992, 3307, 3347
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AloI GAACNNNNNNTCC 4 cut(s) 46, 78, 1799, 1831
Alw21I GWGCWC 4 cut(s) 445, 1717, 2204, 3429
AlwI GGATC 3 cut(s) 863, 4213, 4227
AlwNI CAGNNNCTG 1 cut(s) 1412
Ama87I CYCGRG 1 cut(s) 2805
AoxI GGCC 7 cut(s) 156, 682, 1447, 2011, 2260, 2660, 4085
ApoI RAATTY 7 cut(s) 460, 689, 698, 1277, 1860, 2180, 2974
Asp700I GAANNNNTTC 2 cut(s) 3805, 4061
AspS9I GGNCC 7 cut(s) 156, 590, 1055, 1256, 1357, 3257, 4294
AsuC2I CCSGG 3 cut(s) 2664, 3477, 4084
AsuII TTCGAA 2 cut(s) 1284, 2461
AvaI CYCGRG 1 cut(s) 2805
AvaII GGWCC 6 cut(s) 590, 1055, 1256, 1357, 3257, 4294
AxyI CCTNAGG 1 cut(s) 1469
BaeGI GKGCMC 2 cut(s) 2042, 2305
BalI TGGCCA 2 cut(s) 684, 1449
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 1 cut(s) 3429
BauI CACGAG 1 cut(s) 3880
BbrPI CACGTG 1 cut(s) 1262
BbsI GAAGAC 1 cut(s) 1470
Bbv12I GWGCWC 4 cut(s) 445, 1717, 2204, 3429
BceAI ACGGC 1 cut(s) 3624
BcgI CGANNNNNNTGC 2 cut(s) 2618, 2652
BciT130I CCWGG 7 cut(s) 571, 797, 1824, 2884, 2994, 3309, 3349
BciVI GTATCC 2 cut(s) 2123, 2771
BclI TGATCA 2 cut(s) 927, 3681
BcnI CCSGG 3 cut(s) 2664, 3477, 4084
BfmI CTRYAG 3 cut(s) 3042, 3372, 3430
BfrI CTTAAG 4 cut(s) 302, 944, 1660, 4229
BfuAI ACCTGC 1 cut(s) 1936
BfuI GTATCC 2 cut(s) 2123, 2771
Bme18I GGWCC 6 cut(s) 590, 1055, 1256, 1357, 3257, 4294
BmeT110I CYCGRG 1 cut(s) 2805
BmgT120I GGNCC 7 cut(s) 156, 590, 1055, 1256, 1357, 3257, 4294
BmiI GGNNCC 6 cut(s) 436, 591, 1476, 2050, 3481, 4295
BmrI ACTGGG 3 cut(s) 672, 4091, 4129
BmuI ACTGGG 3 cut(s) 672, 4091, 4129
BoxI GACNNNNGTC 2 cut(s) 1166, 3611
BpiI GAAGAC 1 cut(s) 1470
BpmI CTGGAG 3 cut(s) 3330, 3589, 3664
Bpu10I CCTNAGC 1 cut(s) 344
Bpu14I TTCGAA 2 cut(s) 1284, 2461
BpuEI CTTGAG 1 cut(s) 2454
BpuMI CCSGG 3 cut(s) 2664, 3477, 4084
Bsa29I ATCGAT 1 cut(s) 879
BsaAI YACGTR 1 cut(s) 1262
BsaHI GRCGYC 2 cut(s) 8, 3360
BsaI GGTCTC 1 cut(s) 4131
BsaJI CCNNGG 9 cut(s) 262, 796, 1252, 1509, 1823, 2014, 2114, 3307, 3721
BsaWI WCCGGW 2 cut(s) 1037, 1192
BsaXI ACNNNNNCTCC 6 cut(s) 46, 76, 137, 167, 3228, 3258
Bsc4I CCNNNNNNNGG 8 cut(s) 168, 481, 602, 2234, 2250, 2251, 3092, 3476
Bse21I CCTNAGG 1 cut(s) 1469
Bse3DI GCAATG 5 cut(s) 229, 2004, 2340, 3739, 4077
BseBI CCWGG 7 cut(s) 571, 797, 1824, 2884, 2994, 3309, 3349
BseCI ATCGAT 1 cut(s) 879
BseDI CCNNGG 9 cut(s) 262, 796, 1252, 1509, 1823, 2014, 2114, 3307, 3721
BseLI CCNNNNNNNGG 8 cut(s) 168, 481, 602, 2234, 2250, 2251, 3092, 3476
BseMI GCAATG 5 cut(s) 229, 2004, 2340, 3739, 4077
BseMII CTCAG 9 cut(s) 220, 358, 722, 1224, 1419, 2263, 3006, 3414, 4223
BseRI GAGGAG 5 cut(s) 67, 152, 155, 158, 3249
BseSI GKGCMC 2 cut(s) 2042, 2305
BseX3I CGGCCG 1 cut(s) 4085
BsgI GTGCAG 1 cut(s) 1173
Bsh1236I CGCG 2 cut(s) 2312, 3580
Bsh1285I CGRYCG 1 cut(s) 4088
BshFI GGCC 7 cut(s) 158, 684, 1449, 2013, 2262, 2662, 4087
BshNI GGYRCC 1 cut(s) 434
BshVI ATCGAT 1 cut(s) 879
BsiEI CGRYCG 1 cut(s) 4088
BsiHKAI GWGCWC 4 cut(s) 445, 1717, 2204, 3429
BsiHKCI CYCGRG 1 cut(s) 2805
BsiSI CCGG 7 cut(s) 49, 1038, 1193, 1780, 2663, 3477, 4084
BslFI GGGAC 3 cut(s) 498, 603, 3471
BslI CCNNNNNNNGG 8 cut(s) 168, 481, 602, 2234, 2250, 2251, 3092, 3476
BsmBI CGTCTC 1 cut(s) 1190
BsmFI GGGAC 3 cut(s) 498, 603, 3471
BsmI GAATGC 3 cut(s) 884, 3465, 3885
BsnI GGCC 7 cut(s) 158, 684, 1449, 2013, 2262, 2662, 4087
Bso31I GGTCTC 1 cut(s) 4131
BsoBI CYCGRG 1 cut(s) 2805
Bsp119I TTCGAA 2 cut(s) 1284, 2461
Bsp1286I GDGCHC 6 cut(s) 445, 1717, 2042, 2204, 2305, 3429
Bsp1407I TGTACA 1 cut(s) 1420
Bsp19I CCATGG 1 cut(s) 2114
Bsp68I TCGCGA 1 cut(s) 3580
BspANI GGCC 7 cut(s) 158, 684, 1449, 2013, 2262, 2662, 4087
BspCNI CTCAG 9 cut(s) 219, 357, 721, 1225, 1418, 2262, 3007, 3415, 4222
BspDI ATCGAT 1 cut(s) 879
BspFNI CGCG 2 cut(s) 2312, 3580
BspHI TCATGA 6 cut(s) 271, 541, 888, 1131, 3277, 3603
BspLI GGNNCC 6 cut(s) 436, 591, 1476, 2050, 3481, 4295
BspMAI CTGCAG 1 cut(s) 3376
BspMI ACCTGC 1 cut(s) 1936
BspPI GGATC 3 cut(s) 863, 4213, 4227
BspQI GCTCTTC 2 cut(s) 2594, 4307
BspT104I TTCGAA 2 cut(s) 1284, 2461
BspT107I GGYRCC 1 cut(s) 434
BspTI CTTAAG 4 cut(s) 302, 944, 1660, 4229
BspTNI GGTCTC 1 cut(s) 4131
BsrBI CCGCTC 2 cut(s) 169, 552
BsrDI GCAATG 5 cut(s) 229, 2004, 2340, 3739, 4077
BsrGI TGTACA 1 cut(s) 1420
BssECI CCNNGG 9 cut(s) 262, 796, 1252, 1509, 1823, 2014, 2114, 3307, 3721
BssNAI GTATAC 4 cut(s) 1603, 1973, 2268, 2875
BssNI GRCGYC 2 cut(s) 8, 3360
BssSI CACGAG 1 cut(s) 3880
BssT1I CCWWGG 6 cut(s) 262, 1252, 1509, 2014, 2114, 3721
Bst1107I GTATAC 4 cut(s) 1603, 1973, 2268, 2875
Bst2BI CACGAG 1 cut(s) 3880
Bst2UI CCWGG 7 cut(s) 571, 797, 1824, 2884, 2994, 3309, 3349
Bst6I CTCTTC 7 cut(s) 332, 1553, 2000, 2312, 2594, 2610, 4307
BstACI GRCGYC 2 cut(s) 8, 3360
BstAFI CTTAAG 4 cut(s) 302, 944, 1660, 4229
BstAPI GCANNNNNTGC 3 cut(s) 1562, 1643, 3540
BstAUI TGTACA 1 cut(s) 1420
BstBAI YACGTR 1 cut(s) 1262
BstBI TTCGAA 2 cut(s) 1284, 2461
BstDSI CCRYGG 1 cut(s) 2114
BstFNI CGCG 2 cut(s) 2312, 3580
BstMCI CGRYCG 1 cut(s) 4088
BstNI CCWGG 7 cut(s) 571, 797, 1824, 2884, 2994, 3309, 3349
BstNSI RCATGY 2 cut(s) 997, 1560
BstPAI GACNNNNGTC 2 cut(s) 1166, 3611
BstSFI CTRYAG 3 cut(s) 3042, 3372, 3430
BstSLI GKGCMC 2 cut(s) 2042, 2305
BstUI CGCG 2 cut(s) 2312, 3580
BstV2I GAAGAC 1 cut(s) 1470
BstX2I RGATCY 3 cut(s) 868, 4205, 4219
BstXI CCANNNNNNTGG 3 cut(s) 2716, 4104, 4137
BstYI RGATCY 3 cut(s) 868, 4205, 4219
BstZ17I GTATAC 4 cut(s) 1603, 1973, 2268, 2875
BstZI CGGCCG 1 cut(s) 4085
Bsu15I ATCGAT 1 cut(s) 879
Bsu36I CCTNAGG 1 cut(s) 1469
BsuI GTATCC 2 cut(s) 2123, 2771
BsuRI GGCC 7 cut(s) 158, 684, 1449, 2013, 2262, 2662, 4087
BsuTUI ATCGAT 1 cut(s) 879
BtgI CCRYGG 1 cut(s) 2114
BtsI GCAGTG 2 cut(s) 578, 2057
BtsIMutI CAGTG 9 cut(s) 76, 578, 1413, 1715, 2057, 2229, 2653, 3556, 4104
BtuMI TCGCGA 1 cut(s) 3580
BveI ACCTGC 1 cut(s) 1936
CaiI CAGNNNCTG 1 cut(s) 1412
CciI TCATGA 6 cut(s) 271, 541, 888, 1131, 3277, 3603
Cfr13I GGNCC 7 cut(s) 156, 590, 1055, 1256, 1357, 3257, 4294
ClaI ATCGAT 1 cut(s) 879
CseI GACGC 1 cut(s) 2879
Csp6I GTAC 8 cut(s) 1249, 1421, 2749, 3877, 3907, 3934, 4114, 4265
CviQI GTAC 8 cut(s) 1249, 1421, 2749, 3877, 3907, 3934, 4114, 4265
DrdI GACNNNNNNGTC 1 cut(s) 3264
DseDI GACNNNNNNGTC 1 cut(s) 3264
EaeI YGGCCR 3 cut(s) 682, 1447, 4085
EagI CGGCCG 1 cut(s) 4085
Eam1104I CTCTTC 7 cut(s) 332, 1553, 2000, 2312, 2594, 2610, 4307
EarI CTCTTC 7 cut(s) 332, 1553, 2000, 2312, 2594, 2610, 4307
Ecl136II GAGCTC 1 cut(s) 3427
EclXI CGGCCG 1 cut(s) 4085
Eco130I CCWWGG 6 cut(s) 262, 1252, 1509, 2014, 2114, 3721
Eco147I AGGCCT 1 cut(s) 2262
Eco24I GRGCYC 1 cut(s) 3429
Eco31I GGTCTC 1 cut(s) 4131
Eco47I GGWCC 6 cut(s) 590, 1055, 1256, 1357, 3257, 4294
Eco52I CGGCCG 1 cut(s) 4085
Eco53kI GAGCTC 1 cut(s) 3427
Eco57I CTGAAG 3 cut(s) 170, 261, 4221
Eco72I CACGTG 1 cut(s) 1262
Eco81I CCTNAGG 1 cut(s) 1469
Eco88I CYCGRG 1 cut(s) 2805
EcoICRI GAGCTC 1 cut(s) 3427
EcoO109I RGGNCCY 1 cut(s) 4294
EcoRI GAATTC 4 cut(s) 689, 1277, 1860, 2974
EcoRII CCWGG 7 cut(s) 569, 795, 1822, 2882, 2992, 3307, 3347
EcoT14I CCWWGG 6 cut(s) 262, 1252, 1509, 2014, 2114, 3721
EcoT22I ATGCAT 3 cut(s) 427, 886, 3826
EcoT38I GRGCYC 1 cut(s) 3429
ErhI CCWWGG 6 cut(s) 262, 1252, 1509, 2014, 2114, 3721
Esp3I CGTCTC 1 cut(s) 1190
FalI AAGNNNNNCTT 4 cut(s) 1544, 1576, 3527, 3559
FaqI GGGAC 3 cut(s) 498, 603, 3471
FauI CCCGC 2 cut(s) 2738, 3790
FauNDI CATATG 3 cut(s) 427, 1480, 2848
FbaI TGATCA 2 cut(s) 927, 3681
FblI GTMKAC 4 cut(s) 1602, 1972, 2267, 2874
FriOI GRGCYC 1 cut(s) 3429
GsuI CTGGAG 3 cut(s) 3330, 3589, 3664
HaeIII GGCC 7 cut(s) 158, 684, 1449, 2013, 2262, 2662, 4087
HapII CCGG 7 cut(s) 49, 1038, 1193, 1780, 2663, 3477, 4084
HgaI GACGC 1 cut(s) 2879
Hin1I GRCGYC 2 cut(s) 8, 3360
HindIII AAGCTT 3 cut(s) 1065, 3204, 3517
HinfI GANTC 8 cut(s) 504, 851, 1694, 1880, 2402, 2620, 2864, 3656
HpaII CCGG 7 cut(s) 49, 1038, 1193, 1780, 2663, 3477, 4084
Hpy166II GTNNAC 9 cut(s) 1016, 1249, 1259, 1603, 1973, 2268, 2825, 2875, 3909
Hpy8I GTNNAC 9 cut(s) 1016, 1249, 1259, 1603, 1973, 2268, 2825, 2875, 3909
HpyCH4IV ACGT 9 cut(s) 179, 773, 790, 1027, 1199, 1261, 3360, 3855, 4176
HpySE526I ACGT 9 cut(s) 179, 773, 790, 1027, 1199, 1261, 3360, 3855, 4176
Hsp92I GRCGYC 2 cut(s) 8, 3360
Ksp22I TGATCA 2 cut(s) 927, 3681
LguI GCTCTTC 2 cut(s) 2594, 4307
LmnI GCTCC 9 cut(s) 54, 145, 1712, 1936, 2199, 3485, 3645, 3695, 3725
MaeII ACGT 9 cut(s) 179, 773, 790, 1027, 1199, 1261, 3360, 3855, 4176
MbiI CCGCTC 2 cut(s) 169, 552
MfeI CAATTG 5 cut(s) 1641, 2166, 2426, 3762, 4131
MflI RGATCY 3 cut(s) 868, 4205, 4219
MhlI GDGCHC 6 cut(s) 445, 1717, 2042, 2204, 2305, 3429
MlsI TGGCCA 2 cut(s) 684, 1449
MluNI TGGCCA 2 cut(s) 684, 1449
MlyI GAGTC 4 cut(s) 498, 2396, 2614, 3650
MmeI TCCRAC 5 cut(s) 473, 756, 784, 1033, 2965
Mox20I TGGCCA 2 cut(s) 684, 1449
Mph1103I ATGCAT 3 cut(s) 427, 886, 3826
MroXI GAANNNNTTC 2 cut(s) 3805, 4061
MscI TGGCCA 2 cut(s) 684, 1449
MslI CAYNNNNRTG 4 cut(s) 750, 902, 2714, 3074
Msp20I TGGCCA 2 cut(s) 684, 1449
MspA1I CMGCKG 2 cut(s) 2814, 3797
MspCI CTTAAG 4 cut(s) 302, 944, 1660, 4229
MspI CCGG 7 cut(s) 49, 1038, 1193, 1780, 2663, 3477, 4084
MunI CAATTG 5 cut(s) 1641, 2166, 2426, 3762, 4131
Mva1269I GAATGC 3 cut(s) 884, 3465, 3885
MvaI CCWGG 7 cut(s) 571, 797, 1824, 2884, 2994, 3309, 3349
MvnI CGCG 2 cut(s) 2312, 3580
NciI CCSGG 3 cut(s) 2664, 3477, 4084
NcoI CCATGG 1 cut(s) 2114
NdeI CATATG 3 cut(s) 427, 1480, 2848
NlaIV GGNNCC 6 cut(s) 436, 591, 1476, 2050, 3481, 4295
NmuCI GTSAC 4 cut(s) 670, 1159, 1342, 4172
NruI TCGCGA 1 cut(s) 3580
NsiI ATGCAT 3 cut(s) 427, 886, 3826
NspI RCATGY 2 cut(s) 997, 1560
NspV TTCGAA 2 cut(s) 1284, 2461
PaeI GCATGC 2 cut(s) 997, 1560
PagI TCATGA 6 cut(s) 271, 541, 888, 1131, 3277, 3603
PaqCI CACCTGC 1 cut(s) 1936
PceI AGGCCT 1 cut(s) 2262
PciSI GCTCTTC 2 cut(s) 2594, 4307
PctI GAATGC 3 cut(s) 884, 3465, 3885
PdmI GAANNNNTTC 2 cut(s) 3805, 4061
PfeI GAWTC 4 cut(s) 851, 1694, 1880, 2864
PfoI TCCNGGA 1 cut(s) 569
PleI GAGTC 4 cut(s) 498, 2396, 2614, 3650
PmaCI CACGTG 1 cut(s) 1262
PmlI CACGTG 1 cut(s) 1262
PpsI GAGTC 4 cut(s) 498, 2396, 2614, 3650
Ppu21I YACGTR 1 cut(s) 1262
PpuMI RGGWCCY 1 cut(s) 4294
PshAI GACNNNNGTC 2 cut(s) 1166, 3611
Psp124BI GAGCTC 1 cut(s) 3429
Psp1406I AACGTT 1 cut(s) 773
Psp5II RGGWCCY 1 cut(s) 4294
Psp6I CCWGG 7 cut(s) 569, 795, 1822, 2882, 2992, 3307, 3347
PspCI CACGTG 1 cut(s) 1262
PspGI CCWGG 7 cut(s) 569, 795, 1822, 2882, 2992, 3307, 3347
PspN4I GGNNCC 6 cut(s) 436, 591, 1476, 2050, 3481, 4295
PspPI GGNCC 7 cut(s) 156, 590, 1055, 1256, 1357, 3257, 4294
PspPPI RGGWCCY 1 cut(s) 4294
PsrI GAACNNNNNNTAC 2 cut(s) 1376, 1408
PstI CTGCAG 1 cut(s) 3376
PstNI CAGNNNCTG 1 cut(s) 1412
PsuI RGATCY 3 cut(s) 868, 4205, 4219
RruI TCGCGA 1 cut(s) 3580
RsaI GTAC 8 cut(s) 1250, 1422, 2750, 3878, 3908, 3935, 4115, 4266
RsaNI GTAC 8 cut(s) 1249, 1421, 2749, 3877, 3907, 3934, 4114, 4265
RseI CAYNNNNRTG 4 cut(s) 750, 902, 2714, 3074
SacI GAGCTC 1 cut(s) 3429
SapI GCTCTTC 2 cut(s) 2594, 4307
Sau96I GGNCC 7 cut(s) 156, 590, 1055, 1256, 1357, 3257, 4294
SchI GAGTC 4 cut(s) 498, 2396, 2614, 3650
SduI GDGCHC 6 cut(s) 445, 1717, 2042, 2204, 2305, 3429
SfcI CTRYAG 3 cut(s) 3042, 3372, 3430
SfuI TTCGAA 2 cut(s) 1284, 2461
SinI GGWCC 6 cut(s) 590, 1055, 1256, 1357, 3257, 4294
SmiMI CAYNNNNRTG 4 cut(s) 750, 902, 2714, 3074
SmlI CTYRAG 5 cut(s) 302, 944, 1660, 2469, 4229
SmoI CTYRAG 5 cut(s) 302, 944, 1660, 2469, 4229
SphI GCATGC 2 cut(s) 997, 1560
SseBI AGGCCT 1 cut(s) 2262
SspI AATATT 2 cut(s) 2279, 3293
SstI GAGCTC 1 cut(s) 3429
StuI AGGCCT 1 cut(s) 2262
StyI CCWWGG 6 cut(s) 262, 1252, 1509, 2014, 2114, 3721
TaiI ACGT 9 cut(s) 182, 776, 793, 1030, 1202, 1264, 3363, 3858, 4179
TaqI TCGA 8 cut(s) 879, 1284, 1535, 2391, 2461, 2623, 2638, 2955
TatI WGTACW 3 cut(s) 1420, 3876, 3933
TauI GCSGC 4 cut(s) 8, 161, 3116, 4090
TfiI GAWTC 4 cut(s) 851, 1694, 1880, 2864
TscAI CASTG 9 cut(s) 76, 585, 1413, 1722, 2064, 2236, 2653, 3563, 4104
TseFI GTSAC 4 cut(s) 670, 1159, 1342, 4172
Tsp45I GTSAC 4 cut(s) 670, 1159, 1342, 4172
TspGWI ACGGA 3 cut(s) 1988, 3051, 3742
TspRI CASTG 9 cut(s) 76, 585, 1413, 1722, 2064, 2236, 2653, 3563, 4104
Vha464I CTTAAG 4 cut(s) 302, 944, 1660, 4229
VpaK11BI GGWCC 6 cut(s) 590, 1055, 1256, 1357, 3257, 4294
XapI RAATTY 7 cut(s) 460, 689, 698, 1277, 1860, 2180, 2974
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 2 cut(s) 997, 1560
XcmI CCANNNNNNNNNTGG 4 cut(s) 1873, 2121, 2521, 3073
XmiI GTMKAC 4 cut(s) 1602, 1972, 2267, 2874
XmnI GAANNNNTTC 2 cut(s) 3805, 4061
ZraI GACGTC 1 cut(s) 3361
Zsp2I ATGCAT 3 cut(s) 427, 886, 3826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.