pycom12g01950
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
1626167 .. 1631694
5528 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g01950.5

Sequence Viewer

Length: 2445 bp
ATGGCGACGGCTTTGGTGAGCGACGATCTGGCCCAGTCGACCAGCAGCCGGAGAAGCTGGGGGTTGGGAAGCAAGAGGAGCTGGGCGTCCACAAGTTTCGGGGAAGTGTGGCAGGCGCCGCCGGATGTGTTCAACAGGAGCGGGCGGCAGGATGAGGAGGAGGAGCTGCGGTGGGCAGCGATCGAGCGGCTGCCGACATATGACAGGTTGAAAAGAGGGATGCTGAGGCAGGTGCTGGACAACGGGAGGGTGGTGACTGATGAGGTGGACGTGACGAAGCTGGGAATGCAGGACAGGAAGCAATTAATGGAGAGTATATTGAAGGTTGTGGAAGATGATAACGAAAGGTTCTTGAGAAGACTTAGGGACAGAACTGATAGGGCAAGCCTATCTTGTCCATTGATCTCCTCTGCGATCCTTCAACGACTCGATCAAATGGGGACTCAAAAACCATCTCTCGATTCCAAAAACACGCCGTTGAGGCCGACCGAGGATTTTGGGCAAGGAGGCGCTGGGTGGTTTTTTTTTTTTTTTGGGGGGGGGGGGGTGATTGGGCTGAGGATGACCCTACTTTTGGGTCCTCCAGGTGCAGGCAAAACAACCTTGTTACTAGCACTTGCAGGAAAGCTTGATGATGATCTAAGAGTTTCTGGGAGAGTCACATATTGTGGCCATGAACTGCATGAGTTTGTTCCTAGAAGAACATGTGCTTACATTAGCCAGCATGATCTACACTCTGGAGAAATGACAGTGAGAAAGACGTTGGATTTCTCGGGACGTTGTTTGGGTGTCGGAACTCGATACCAACTGCTGGCTGAACTCTCAAGAAGAGAGAAAGAAGCCGGAATCAAGCCGGACCCCGAGATTGATGCATTCATGAAAGCCACCTCAGTCTCAGGCCAGAAGACTAGTTTAGTCACAGATTATGTTCTCAAGATACTTGGATTGGATACCTGTGCTGATATCTTAGTTGGTGATGATATGAGGAGGGGTATTTCCGGTGGCCAGAAAAAACGCGTGACCACCGGGGAGATGTTGGTAGGACCAGCAAAGGTTCTTCTAATGGATGAAATATCAACAGGGTTAGACAGTTCCACAACTTTTCAGATATGCAGATACATGAGGCAATTGGTTCACATAATGGATGTTACCATGGTCATCTCTCTTCTGCAGCCTGCGCCGGAGACATTTGAGCTCTTTGATGACCTAATCCTGCTTTCGGAAGGGCAGATCGTGTACCAAGGTCTGCGCGAGAGTGTCCTTGAGTTCTTCGAACACATGGGATTCAAGTGCCCAGAGAGGAAAGGAGTTGTTGATTTTTTGCAAGAAGTGACATCCAGGAAGGACCAAGAGCAGTATTGGTTCAAAAAAAGTCAACCTTACAGATATATTTCGGTTCCTGAGTTCGTGAAGGCTTTCAACTCTTTTCAGATTGGCCAACAGCTTGCAGCTGATCTCAGGGTTCCTTACGAAAAGTCCAGAGCTCATCCGGCTGCATTGGTCACAAAGAAATATGGCATTTCAAACTGGGAATTGTTCAAGGCATGTTTTTCGAGGGAGTGGCTGCTAATGAAGCGCAATTCATTCATGTACATATTTAAGACCACGCAGATAACGATAGTGTCATTGATCGCTTTGACTGTGTTCCTTAGAACAGAAATGCCTGTGGGGACAGTACAAGATGGAGGGAAATTTTTTGGAGCACTGTTCTTCAGTCTAATCAATGTGATGTTTAATGGTATGGCAGAACTGGCAATGACTGTTTTCAGACTTCCTGTTTTCTATAAGCAGAGGGATTTCTTGTTTTATCCTGCGTGGGCTTTCGGATTACCAATTTGGGTCCTCAGGATCCCGCTTTCATTCATGGAATCTGGGATCTGGATCATTCTTACCTATTACACCATTGGATTTGCTCCAGCTGCTAGCAGATTTTTCAAACAGTTCCTGGCATTCTTTGGCATACATCAGATGGCTCTATCCCTCTTTAGGTTCATTGCTGCACTTGGAAGAACACAAGTTGTTGCTAGCACGCTTGGTGCTTTTACCTTGCTAATGGTATTCGTTCTGGGAGGGTTTATTGTTTCCAAAATTCCGGAGCTGACACAACCTCCCATTCTTTTTTTTGTAAAACCAAAATTAGCTCTCGGGGATGCAAAAGCTGTTGTATCTGATGAAGAAAGTGAAGGAAAGAGAAAGAAGTCGTTAAGTGAAGAAATGACAGTGAAAAGTTCTTCAAAAATTGTTGGTGATTCAGATCATGCACCAAATAAAGGAATGGTTTTGCCCTTTCAACCCCTTTCACTTGTGTTTAACCATGTGAACTACTTCGTGGATATGCCCTCTGAAATGAAGACTCATGGAGTTGAAGAACGATCGTCTTCAATTGCTACGAGATGTCTGTGGTGCTTTCAGACCCGGAATATTGACAGCCCTTGTAGGTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

815

Amino Acids

91.81

Weight (kDa)

8.84

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 220
Acc36I ACCTGC 1 cut(s) 220
AccB1I GGYRCC 1 cut(s) 115
AccB7I CCANNNNNTGG 1 cut(s) 811
AccBSI CCGCTC 2 cut(s) 141, 187
AccI GTMKAC 1 cut(s) 38
AccII CGCG 2 cut(s) 1017, 1251
AccIII TCCGGA 1 cut(s) 2092
AciI CCGC 6 cut(s) 119, 141, 145, 169, 187, 1853
AclWI GGATC 5 cut(s) 409, 1843, 1856, 1883, 1889
AcoI YGGCCR 3 cut(s) 670, 1003, 1435
AcsI RAATTY 2 cut(s) 1691, 2088
AcuI CTGAAG 1 cut(s) 1696
AcyI GRCGYC 2 cut(s) 86, 116
AfaI GTAC 3 cut(s) 1238, 1592, 1677
AfiI CCNNNNNNNGG 7 cut(s) 48, 574, 590, 811, 1219, 1986, 2270
AflIII ACRYGT 2 cut(s) 704, 1015
AhlI ACTAGT 1 cut(s) 908
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 3 cut(s) 583, 1337, 1944
Alw21I GWGCWC 3 cut(s) 1197, 1486, 1705
Alw26I GTCTC 2 cut(s) 898, 1178
AlwI GGATC 5 cut(s) 409, 1843, 1856, 1883, 1889
AlwNI CAGNNNCTG 2 cut(s) 235, 1945
Ama87I CYCGRG 3 cut(s) 772, 860, 2144
Aor13HI TCCGGA 1 cut(s) 2092
AoxI GGCC 6 cut(s) 30, 482, 670, 898, 1003, 1435
ApoI RAATTY 2 cut(s) 1691, 2088
ArsI GACNNNNNNTTYG 2 cut(s) 556, 588
AseI ATTAAT 1 cut(s) 305
Asp700I GAANNNNTTC 2 cut(s) 1415, 2324
AspLEI GCGC 5 cut(s) 118, 512, 1180, 1251, 1578
AspS9I GGNCC 6 cut(s) 31, 578, 856, 1043, 1345, 1840
AsuC2I CCSGG 2 cut(s) 1027, 2416
AsuHPI GGTGA 5 cut(s) 28, 265, 559, 986, 2258
AsuII TTCGAA 1 cut(s) 1272
AsuNHI GCTAGC 2 cut(s) 1922, 2024
AvaI CYCGRG 3 cut(s) 772, 860, 2144
AvaII GGWCC 5 cut(s) 578, 856, 1043, 1345, 1840
AxyI CCTNAGG 1 cut(s) 1844
BaeGI GKGCMC 1 cut(s) 1295
BalI TGGCCA 3 cut(s) 672, 1005, 1437
BamHI GGATCC 1 cut(s) 1848
BanI GGYRCC 1 cut(s) 115
BanII GRGCYC 2 cut(s) 1197, 1486
BbsI GAAGAC 4 cut(s) 364, 911, 2357, 2370
Bbv12I GWGCWC 3 cut(s) 1197, 1486, 1705
BbvCI CCTCAGC 2 cut(s) 224, 557
BccI CCATC 3 cut(s) 460, 1676, 1963
BceAI ACGGC 2 cut(s) 24, 460
BcgI CGANNNNNNTGC 4 cut(s) 851, 885, 1533, 1567
BciT130I CCWGG 3 cut(s) 585, 1339, 1946
BciVI GTATCC 1 cut(s) 943
BcnI CCSGG 2 cut(s) 1027, 2416
BcoDI GTCTC 2 cut(s) 898, 1178
BcuI ACTAGT 1 cut(s) 908
BfaI CTAG 5 cut(s) 611, 696, 909, 1923, 2025
BfmI CTRYAG 1 cut(s) 1169
BfoI RGCGCY 2 cut(s) 119, 513
BfuAI ACCTGC 1 cut(s) 220
BfuI GTATCC 1 cut(s) 943
BglI GCCNNNNNGGC 1 cut(s) 481
Bme1390I CCNGG 5 cut(s) 585, 1027, 1339, 1946, 2416
Bme18I GGWCC 5 cut(s) 578, 856, 1043, 1345, 1840
BmeT110I CYCGRG 3 cut(s) 772, 860, 2144
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 6 cut(s) 31, 578, 856, 1043, 1345, 1840
BmiI GGNNCC 7 cut(s) 117, 579, 858, 1398, 1464, 1841, 1850
BmrFI CCNGG 5 cut(s) 585, 1027, 1339, 1946, 2416
BmrI ACTGGG 2 cut(s) 28, 1537
BmsI GCATC 3 cut(s) 210, 859, 2140
BmtI GCTAGC 2 cut(s) 1926, 2028
BmuI ACTGGG 2 cut(s) 28, 1537
BpiI GAAGAC 4 cut(s) 364, 911, 2357, 2370
BpmI CTGGAG 3 cut(s) 567, 759, 1899
Bpu10I CCTNAGC 2 cut(s) 224, 557
Bpu14I TTCGAA 1 cut(s) 1272
BpuEI CTTGAG 4 cut(s) 373, 808, 917, 1283
BpuMI CCSGG 2 cut(s) 1027, 2416
BsaBI GATNNNNATC 3 cut(s) 636, 1880, 2253
BsaHI GRCGYC 2 cut(s) 86, 116
BsaJI CCNNGG 4 cut(s) 489, 1026, 1152, 1240
BsaWI WCCGGW 2 cut(s) 998, 2092
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 2092, 2122
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 574, 590, 811, 1219, 1986, 2270
Bse1I ACTGG 3 cut(s) 34, 1532, 1755
Bse21I CCTNAGG 1 cut(s) 1844
Bse3DI GCAATG 2 cut(s) 1761, 1992
Bse8I GATNNNNATC 3 cut(s) 636, 1880, 2253
BseAI TCCGGA 1 cut(s) 2092
BseBI CCWGG 3 cut(s) 585, 1339, 1946
BseDI CCNNGG 4 cut(s) 489, 1026, 1152, 1240
BseGI GGATG 9 cut(s) 130, 157, 225, 567, 1072, 1150, 1334, 1486, 2155
BseJI GATNNNNATC 3 cut(s) 636, 1880, 2253
BseLI CCNNNNNNNGG 7 cut(s) 48, 574, 590, 811, 1219, 1986, 2270
BseMI GCAATG 2 cut(s) 1761, 1992
BseMII CTCAG 7 cut(s) 215, 548, 903, 909, 1392, 1471, 1858
BseNI ACTGG 3 cut(s) 34, 1532, 1755
BseRI GAGGAG 6 cut(s) 91, 170, 173, 176, 397, 1000
BseSI GKGCMC 1 cut(s) 1295
BseYI CCCAGC 4 cut(s) 57, 81, 280, 512
BsgI GTGCAG 2 cut(s) 609, 1983
Bsh1236I CGCG 2 cut(s) 1017, 1251
Bsh1285I CGRYCG 3 cut(s) 183, 489, 2375
BshFI GGCC 6 cut(s) 32, 484, 672, 900, 1005, 1437
BshNI GGYRCC 1 cut(s) 115
BsiEI CGRYCG 3 cut(s) 183, 489, 2375
BsiHKAI GWGCWC 3 cut(s) 1197, 1486, 1705
BsiHKCI CYCGRG 3 cut(s) 772, 860, 2144
BslFI GGGAC 4 cut(s) 380, 454, 789, 1684
BslI CCNNNNNNNGG 7 cut(s) 48, 574, 590, 811, 1219, 1986, 2270
BsmAI GTCTC 2 cut(s) 898, 1178
BsmFI GGGAC 4 cut(s) 380, 454, 789, 1684
BsmI GAATGC 3 cut(s) 291, 872, 1949
BsnI GGCC 6 cut(s) 32, 484, 672, 900, 1005, 1437
BsoBI CYCGRG 3 cut(s) 772, 860, 2144
Bsp119I TTCGAA 1 cut(s) 1272
Bsp1286I GDGCHC 4 cut(s) 1197, 1295, 1486, 1705
Bsp13I TCCGGA 1 cut(s) 2092
Bsp1407I TGTACA 1 cut(s) 1590
Bsp19I CCATGG 1 cut(s) 1152
BspACI CCGC 6 cut(s) 119, 141, 145, 169, 187, 1853
BspANI GGCC 6 cut(s) 32, 484, 672, 900, 1005, 1437
BspCNI CTCAG 7 cut(s) 216, 549, 902, 908, 1393, 1470, 1857
BspEI TCCGGA 1 cut(s) 2092
BspFNI CGCG 2 cut(s) 1017, 1251
BspHI TCATGA 1 cut(s) 876
BspLI GGNNCC 7 cut(s) 117, 579, 858, 1398, 1464, 1841, 1850
BspMAI CTGCAG 1 cut(s) 1173
BspMI ACCTGC 1 cut(s) 220
BspOI GCTAGC 2 cut(s) 1926, 2028
BspPI GGATC 5 cut(s) 409, 1843, 1856, 1883, 1889
BspT104I TTCGAA 1 cut(s) 1272
BspT107I GGYRCC 1 cut(s) 115
BsrBI CCGCTC 2 cut(s) 141, 187
BsrDI GCAATG 2 cut(s) 1761, 1992
BsrGI TGTACA 1 cut(s) 1590
BsrI ACTGG 3 cut(s) 34, 1532, 1755
BssECI CCNNGG 4 cut(s) 489, 1026, 1152, 1240
BssNI GRCGYC 2 cut(s) 86, 116
BssT1I CCWWGG 2 cut(s) 1152, 1240
Bst2UI CCWGG 3 cut(s) 585, 1339, 1946
Bst4CI ACNGT 8 cut(s) 751, 1091, 1642, 1675, 1707, 1762, 1941, 2221
Bst6I CTCTTC 2 cut(s) 823, 1170
BstACI GRCGYC 2 cut(s) 86, 116
BstAUI TGTACA 1 cut(s) 1590
BstBI TTCGAA 1 cut(s) 1272
BstDSI CCRYGG 1 cut(s) 1152
BstF5I GGATG 9 cut(s) 130, 157, 225, 567, 1072, 1150, 1334, 1486, 2155
BstFNI CGCG 2 cut(s) 1017, 1251
BstH2I RGCGCY 2 cut(s) 119, 513
BstHHI GCGC 5 cut(s) 118, 512, 1180, 1251, 1578
BstMAI GTCTC 2 cut(s) 898, 1178
BstMCI CGRYCG 3 cut(s) 183, 489, 2375
BstNI CCWGG 3 cut(s) 585, 1339, 1946
BstNSI RCATGY 2 cut(s) 708, 1548
BstSCI CCNGG 5 cut(s) 583, 1025, 1337, 1944, 2414
BstSFI CTRYAG 1 cut(s) 1169
BstSLI GKGCMC 1 cut(s) 1295
BstUI CGCG 2 cut(s) 1017, 1251
BstV2I GAAGAC 4 cut(s) 364, 911, 2357, 2370
BstX2I RGATCY 2 cut(s) 1848, 1875
BstYI RGATCY 2 cut(s) 1848, 1875
Bsu36I CCTNAGG 1 cut(s) 1844
BsuI GTATCC 1 cut(s) 943
BsuRI GGCC 6 cut(s) 32, 484, 672, 900, 1005, 1437
BtgI CCRYGG 1 cut(s) 1152
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 9 cut(s) 130, 157, 225, 567, 1072, 1150, 1334, 1486, 2155
BtsIMutI CAGTG 3 cut(s) 756, 1703, 2226
BveI ACCTGC 1 cut(s) 220
CaiI CAGNNNCTG 2 cut(s) 235, 1945
CciI TCATGA 1 cut(s) 876
CfoI GCGC 5 cut(s) 118, 512, 1180, 1251, 1578
Cfr13I GGNCC 6 cut(s) 31, 578, 856, 1043, 1345, 1840
CseI GACGC 1 cut(s) 75
Csp6I GTAC 3 cut(s) 1237, 1591, 1676
CviQI GTAC 3 cut(s) 1237, 1591, 1676
DinI GGCGCC 1 cut(s) 117
EaeI YGGCCR 3 cut(s) 670, 1003, 1435
Eam1104I CTCTTC 2 cut(s) 823, 1170
EarI CTCTTC 2 cut(s) 823, 1170
Ecl136II GAGCTC 2 cut(s) 1195, 1484
Eco130I CCWWGG 2 cut(s) 1152, 1240
Eco24I GRGCYC 2 cut(s) 1197, 1486
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 5 cut(s) 578, 856, 1043, 1345, 1840
Eco53kI GAGCTC 2 cut(s) 1195, 1484
Eco57I CTGAAG 1 cut(s) 1696
Eco81I CCTNAGG 1 cut(s) 1844
Eco88I CYCGRG 3 cut(s) 772, 860, 2144
EcoICRI GAGCTC 2 cut(s) 1195, 1484
EcoO109I RGGNCCY 2 cut(s) 578, 1840
EcoRII CCWGG 3 cut(s) 583, 1337, 1944
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 2 cut(s) 1152, 1240
EcoT22I ATGCAT 1 cut(s) 874
EcoT38I GRGCYC 2 cut(s) 1197, 1486
EgeI GGCGCC 1 cut(s) 117
EheI GGCGCC 1 cut(s) 117
ErhI CCWWGG 2 cut(s) 1152, 1240
FalI AAGNNNNNCTT 4 cut(s) 376, 408, 1363, 1395
FaqI GGGAC 4 cut(s) 380, 454, 789, 1684
FauI CCCGC 2 cut(s) 134, 1860
FauNDI CATATG 1 cut(s) 199
FblI GTMKAC 1 cut(s) 38
FokI GGATG 9 cut(s) 137, 164, 232, 574, 1079, 1157, 1321, 1473, 2162
FriOI GRGCYC 2 cut(s) 1197, 1486
FspBI CTAG 5 cut(s) 611, 696, 909, 1923, 2025
GlaI GCGC 5 cut(s) 117, 511, 1179, 1250, 1577
GsaI CCCAGC 4 cut(s) 61, 85, 284, 516
GsuI CTGGAG 3 cut(s) 567, 759, 1899
HaeII RGCGCY 2 cut(s) 119, 513
HaeIII GGCC 6 cut(s) 32, 484, 672, 900, 1005, 1437
HgaI GACGC 1 cut(s) 75
HhaI GCGC 5 cut(s) 118, 512, 1180, 1251, 1578
Hin1I GRCGYC 2 cut(s) 86, 116
Hin6I GCGC 5 cut(s) 116, 510, 1178, 1249, 1576
HinP1I GCGC 5 cut(s) 116, 510, 1178, 1249, 1576
HincII GTYRAC 2 cut(s) 39, 1376
HindII GTYRAC 2 cut(s) 39, 1376
HindIII AAGCTT 1 cut(s) 626
HinfI GANTC 9 cut(s) 426, 442, 461, 657, 846, 1284, 1868, 2249, 2353
HphI GGTGA 5 cut(s) 28, 265, 559, 986, 2258
Hpy166II GTNNAC 7 cut(s) 39, 90, 268, 1135, 1237, 1376, 2320
Hpy8I GTNNAC 7 cut(s) 39, 90, 268, 1135, 1237, 1376, 2320
Hpy99I CGWCG 2 cut(s) 10, 26
HpyAV CCTTC 6 cut(s) 316, 428, 1217, 1336, 1405, 2177
HpyCH4III ACNGT 8 cut(s) 751, 1091, 1642, 1675, 1707, 1762, 1941, 2221
HpyCH4IV ACGT 3 cut(s) 270, 761, 778
HpySE526I ACGT 3 cut(s) 270, 761, 778
Hsp92I GRCGYC 2 cut(s) 86, 116
HspAI GCGC 5 cut(s) 116, 510, 1178, 1249, 1576
KasI GGCGCC 1 cut(s) 115
Kpn2I TCCGGA 1 cut(s) 2092
LmnI GCTCC 6 cut(s) 78, 138, 163, 1700, 1918, 2095
LweI GCATC 3 cut(s) 210, 859, 2140
MaeI CTAG 5 cut(s) 611, 696, 909, 1923, 2025
MaeII ACGT 3 cut(s) 270, 761, 778
MaeIII GTNAC 9 cut(s) 253, 271, 606, 658, 916, 1018, 1147, 1330, 1501
MbiI CCGCTC 2 cut(s) 141, 187
MfeI CAATTG 2 cut(s) 1127, 2382
MflI RGATCY 2 cut(s) 1848, 1875
MhlI GDGCHC 4 cut(s) 1197, 1295, 1486, 1705
MlsI TGGCCA 3 cut(s) 672, 1005, 1437
MluI ACGCGT 1 cut(s) 1015
MluNI TGGCCA 3 cut(s) 672, 1005, 1437
Mly113I GGCGCC 1 cut(s) 116
MlyI GAGTC 4 cut(s) 420, 436, 666, 2347
MmeI TCCRAC 2 cut(s) 744, 772
Mox20I TGGCCA 3 cut(s) 672, 1005, 1437
Mph1103I ATGCAT 1 cut(s) 874
MroI TCCGGA 1 cut(s) 2092
MroXI GAANNNNTTC 2 cut(s) 1415, 2324
MscI TGGCCA 3 cut(s) 672, 1005, 1437
MseI TTAA 5 cut(s) 305, 1599, 1734, 2204, 2310
Msp20I TGGCCA 3 cut(s) 672, 1005, 1437
MspA1I CMGCKG 2 cut(s) 1451, 1919
MspR9I CCNGG 5 cut(s) 585, 1027, 1339, 1946, 2416
MunI CAATTG 2 cut(s) 1127, 2382
Mva1269I GAATGC 3 cut(s) 291, 872, 1949
MvaI CCWGG 3 cut(s) 585, 1339, 1946
MvnI CGCG 2 cut(s) 1017, 1251
NarI GGCGCC 1 cut(s) 116
NciI CCSGG 2 cut(s) 1027, 2416
NcoI CCATGG 1 cut(s) 1152
NdeI CATATG 1 cut(s) 199
NheI GCTAGC 2 cut(s) 1922, 2024
NlaIV GGNNCC 7 cut(s) 117, 579, 858, 1398, 1464, 1841, 1850
NmuCI GTSAC 7 cut(s) 253, 271, 658, 916, 1018, 1330, 1501
NsiI ATGCAT 1 cut(s) 874
NspI RCATGY 2 cut(s) 708, 1548
NspV TTCGAA 1 cut(s) 1272
PagI TCATGA 1 cut(s) 876
PaqCI CACCTGC 1 cut(s) 220
PciI ACATGT 1 cut(s) 704
PcsI WCGNNNNNNNCGW 1 cut(s) 1613
PctI GAATGC 3 cut(s) 291, 872, 1949
PdmI GAANNNNTTC 2 cut(s) 1415, 2324
PfeI GAWTC 5 cut(s) 461, 846, 1284, 1868, 2249
PflMI CCANNNNNTGG 1 cut(s) 811
PfoI TCCNGGA 1 cut(s) 1337
Ple19I CGATCG 2 cut(s) 183, 2375
PleI GAGTC 4 cut(s) 420, 436, 665, 2347
PluTI GGCGCC 1 cut(s) 119
PpsI GAGTC 4 cut(s) 420, 436, 665, 2347
PpuMI RGGWCCY 2 cut(s) 578, 1840
PscI ACATGT 1 cut(s) 704
PshBI ATTAAT 1 cut(s) 305
Psp124BI GAGCTC 2 cut(s) 1197, 1486
Psp5II RGGWCCY 2 cut(s) 578, 1840
Psp6I CCWGG 3 cut(s) 583, 1337, 1944
PspFI CCCAGC 4 cut(s) 57, 81, 280, 512
PspGI CCWGG 3 cut(s) 583, 1337, 1944
PspN4I GGNNCC 7 cut(s) 117, 579, 858, 1398, 1464, 1841, 1850
PspPI GGNCC 6 cut(s) 31, 578, 856, 1043, 1345, 1840
PspPPI RGGWCCY 2 cut(s) 578, 1840
PstI CTGCAG 1 cut(s) 1173
PstNI CAGNNNCTG 2 cut(s) 235, 1945
PsuI RGATCY 2 cut(s) 1848, 1875
PvuI CGATCG 2 cut(s) 183, 2375
PvuII CAGCTG 2 cut(s) 1451, 1919
RsaI GTAC 3 cut(s) 1238, 1592, 1677
RsaNI GTAC 3 cut(s) 1237, 1591, 1676
SacI GAGCTC 2 cut(s) 1197, 1486
SalI GTCGAC 1 cut(s) 37
SaqAI TTAA 5 cut(s) 305, 1599, 1734, 2204, 2310
Sau96I GGNCC 6 cut(s) 31, 578, 856, 1043, 1345, 1840
SchI GAGTC 4 cut(s) 420, 436, 666, 2347
ScrFI CCNGG 5 cut(s) 585, 1027, 1339, 1946, 2416
SduI GDGCHC 4 cut(s) 1197, 1295, 1486, 1705
SfaNI GCATC 3 cut(s) 210, 859, 2140
SfcI CTRYAG 1 cut(s) 1169
SfoI GGCGCC 1 cut(s) 117
SfuI TTCGAA 1 cut(s) 1272
SinI GGWCC 5 cut(s) 578, 856, 1043, 1345, 1840
SmlI CTYRAG 4 cut(s) 352, 823, 932, 1262
SmoI CTYRAG 4 cut(s) 352, 823, 932, 1262
SpeI ACTAGT 1 cut(s) 908
SsiI CCGC 6 cut(s) 119, 141, 145, 169, 187, 1853
SspDI GGCGCC 1 cut(s) 115
SspI AATATT 1 cut(s) 2422
SspMI CTAG 5 cut(s) 611, 696, 909, 1923, 2025
SstI GAGCTC 2 cut(s) 1197, 1486
StyD4I CCNGG 5 cut(s) 583, 1025, 1337, 1944, 2414
StyI CCWWGG 2 cut(s) 1152, 1240
TaaI ACNGT 8 cut(s) 751, 1091, 1642, 1675, 1707, 1762, 1941, 2221
TaiI ACGT 3 cut(s) 273, 764, 781
TaqI TCGA 7 cut(s) 38, 183, 429, 459, 799, 1272, 1553
TaqII GACCGA 1 cut(s) 503
TatI WGTACW 2 cut(s) 1590, 1675
TauI GCSGC 3 cut(s) 121, 148, 190
TfiI GAWTC 5 cut(s) 461, 846, 1284, 1868, 2249
Tru1I TTAA 5 cut(s) 305, 1599, 1734, 2204, 2310
Tru9I TTAA 5 cut(s) 305, 1599, 1734, 2204, 2310
TscAI CASTG 3 cut(s) 756, 1710, 2226
TseFI GTSAC 7 cut(s) 253, 271, 658, 916, 1018, 1330, 1501
Tsp45I GTSAC 7 cut(s) 253, 271, 658, 916, 1018, 1330, 1501
TspRI CASTG 3 cut(s) 756, 1710, 2226
Van91I CCANNNNNTGG 1 cut(s) 811
VpaK11BI GGWCC 5 cut(s) 578, 856, 1043, 1345, 1840
VspI ATTAAT 1 cut(s) 305
XapI RAATTY 2 cut(s) 1691, 2088
XceI RCATGY 2 cut(s) 708, 1548
XmiI GTMKAC 1 cut(s) 38
XmnI GAANNNNTTC 2 cut(s) 1415, 2324
XspI CTAG 5 cut(s) 611, 696, 909, 1923, 2025
Zsp2I ATGCAT 1 cut(s) 874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.