RLG00000034963

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
57725370 .. 57732233
6864 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034963

Sequence Viewer

Length: 4194 bp
ATGGCGGCTGCAATGGCCGGAGAAGACCTGATGAGGCAGTCGAGTAGCCGGAGGAGCTGGCGGTCGACGAGTGTGCGGGAAATGTGGAACGCGCCGGACGTGTTTCAGAGGAGTGGGAGGCAGCAGGCGGTGGATGAGGAGGAGGAGCTCAAGTGGGCCGCCATAGAGCGGTTGCCGACTTACGATAGGATGAGGAGGGGGATGTTGACTCAGGTGATGAGCAATGGTAGGATTATGCATGACACAGTTGATGTGGCGAATCTTGGGGCTCAGGATAAGAAGCAGTTGATGGAGAGCATACTCAAGGTTGTTGAGGATGATAACGAGAAGTTCTTGCAGAGACTCAGAGCCAGAAACGATAGGGTTGGTATTGAGGTTCCGAAAGTGGAGGTTCGATTCCAGAACTTAGAGATTGAGGGAGATGCGTATGTCGGCACAAGAGCTCTTCCAACTTTACTCAACTCTACTTTGAACGCACTGGAGGCATTAATTGGATTGGTTGGACTCTCACCGTCGAAGAAAAGAGTTGTTAAGATACTCCAAGATGTGAGCGGTATTGTGAAACCATCAAGGGTTACACTTCTTCTTGGACCTCCTTCTTCAGGAAAAACGACACTGCTAAAAGCTCTTGCTGGCAAACTCGATAAAGATCTAAGGGTAAATGGGACTGTTACCTACTGTGGCCATGAATTTAAGGAGTTTGTACCTCAGAGAACTTCCGCTTACATTAGTCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACAATGGATTTCTCCGGACGTTGCCTGGGAGTTGGAACCAGGTATGATATGCTGGTAGAGTTGTCTAGAAGGGAGAAAGATTCAGGTATCAAACCTGATCCTGAAATCGATGCATTCATGAAAGCCACATCTATGTCGGGCCAGGAAACCAGTTTGATCACAGATTATGTTCTCAAGATACTTGGACTAGATATCTGTGCTGATATTATGGTGGGTGACGACATGAGAAGGGGTATCTCTGGAGGGCAAAAGAAGCGTGTAACTACCGGAGAAATGTTGGTTGGACCAGCAAAAGCATTTTTCATGGATGAAATATCAACAGGACTGGACAGTTCCACCACCTTTCAGATTGTCAAGTTTATGAGACAGATGGTTCATATTATGGATGTATCAATGGTCATCTCTCTCTTGCAGCCTGCACCTGAGACATATGAGCTTTTTGATGACATTATTCTTATTTCTGAGGGTCAAATTGTCTACCAAGGCCCACGTGAGAATGTTCTTGAGTTTTTTGAACATATGGGATTCAAATGCCCAGATAGAAAGGGTGTAGCTGACTTCTTGCAAGAAGTGACCTCAAAGAAGGATCAAGAACAGTACTGGTATAAGAAGAACCAACCTTACAGATATGTCTCTGTACCTGATTTCGTAAGGGCTTTCACCTCTTTCCATGTTGGTCAACGGCTTGTGGAGGAACTAAGAGTTCCTTATGATAAAAGAACTACACATCCTGCTGCTTTGGTGAAAGAAAGGTATGGAATATCCAACATGGAGCTCTTCAAGGCATGTATGTCAAGGGAATGGCTGCTGATGAAGCGTAACTCTTTTGTGTACATCTTCAAAACTACCCAGATCACAATCATGGCTACAATTGCTTTGACTGTATTCTTAAGAACGGAAATGAAAGCTGGGACAGTAGAAGATTCTGCCAAATTTTGGGGAGCTCTGTTTTTCAGTCTCATTAATGTCATGTTTAACGGAATGGCAGAGCTTGCAATGACAGGTTTCAGGCTTCCCGTGTACTTTAAACAAAGAGATGCCTTGTTCTACCCTGGCTGGGCTTTTGGCTTGCCAATTTGGCTAACCAGAATTCCAATTTCACTGTTGGAATCTGGCATATGGATCATTTTTACATACTACACCATCGGATTTGCTCCTGCAGCCAGTAGGTTCTTTAAACAGTTCTTGGCTTTCTTCGGTATACATCAGATGGCACTCTCCCTCTTCCGTTTCATTGCTGCTCTTGGGAGATCAGAGGTTGTTTCAGGCACAATTGGTTCCTTTACCTTGCTAATGGTGTTTGTCCTAGGAGGTTTCATTGTTGCTAAAGTAGGAAAGCTACTTCTCAAGCAAAGAGGCCTCTATACTGAAGAGTATTGGTATTGGATTTGTGTTGGAGCGCTCTTCGCATTTTCTCTTCTGTTTAATGTTCTTTTCATCGCATGCTTGACCTTCTTAGATCCTCTCGGTGAAACTAAAACTTTGATTGAGAATGATGACGCTGAAAGCAAGAGGAAGCGACGATCCAATCCTGAAGGTATTGACATGCAAGTGAGAAACGCTCAAGGAGGTCAAGCCAAAAGAGGAATGGTCTTGCCTTTCCAGCCCCTTTCACTTGCTTTCAACCATGTGAATTACTATGTGGATATGCCTGCTGAAATGAAAAGCCAAGGGATTGAAGAGACCCGACTGCAACTACTGAGAGATATTAGTGGTGCATTTAGGCCAGGTGTTTTGACTGCATTAGTTGGTGTTAGTGGTGCCGGAAAGACCACCTTGATGGATGTCTTGGCTGGAAGAAAGACAGGGGGGTACATTGAAGGAAGTATTACCATCTCGGGTTATCCAAAGAACCAAGAGACATTTGCTCGGGTCAGCGGTTACTGTGAGCAGAATGACATTCATTCTCCATTTATTACTGTTTATGAATCTCTCTTATACTCTGCATGGCTGCGTCTTGCTAAAGATGTCAAGACGGAGACACGAAAGATGTTTGTTGATGAGGTTATGGACTTGGTCGAGCTTCATCCATTAAGGAATGCTTTAGTTGGACTTCCAGGAGTTGATGGACTTTCAACTGAGCAAAGGAAAAGGCTCACCATTGCTGTGGAATTGGTTGCAAATCCTTCTATCATCTTCATGGATGAGCCAACCTCAGGTCTTGATGCTAGAGCAGCTGCCATTGTTATGCGTACAGTAAGAAACACTGTGGATACAGGACGAACTGTTGTCTGCACGATTCATCAACCTAGCATTGACATTTTTGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGACTTATGCTGGACCTCTAGGTCGCCAATCTCACAAGCTTGTTGAATATTTTGAGGCTATACCAGGGGTCACCAAGATCAAAGATGGTTATAATCCTGCTACCTGGATGTTAGAGGTCAGCTCTTCAGCAATGGAAGCTCAACTTGACATTGACTTTGCAGAAGTATACGCGAACTCTGATCTCTATAGGAGAACTCAGGAACTGATCAAGGAGCTAAGCACACCGGAGCCTGGCTCTAAGGATCTTTACTTCCCCACCCAATACTCACAAAGCTATCTAACTCAATGCAAGGCTTGCTTCTGGAAACAACACTGGTCATACTGGAGAAACTCACGATACAATGCCATTAGGTTTTTCATGACGATTTGCATTGGTGGATTATTTGGTGTTATCTTCTGGAGCAAGGGAGACCAGATCCACAAACAACAGGACTTGATTAATCTTTTGGGAGCTACCTATGCTGCTGTTCTTTTCCTTGGAGCTAGCAATGCTTCTGCTGTGCAATCCGTGGTTGCAGTTGAGAGAACAGTTTTCTATCGTGAAAGAGCAGCGGGAATGTATTCAGAGTTGCCTTACGCATTTGCTCAGGTGGCTATTGAGACAATTTATGTTGCAATCCAAACCTTTATATATTCCTGTATTCTGTATTCCATGATCGGGTACACTTGGAAGGTGGAGAAGTTTTTCTACTTCTACTACTTCATTTTCATGTGCTTTACCTACTTCTCAATGTACGGAATGATGGTGGTTGCCCTAACTCCTGGCCATCAAATTGCTGCAATTGTTATGTCTTTCTTCCTGAGTTTCTGGAACTTGTTCTCTGGTTTCCTGATCCCTAGACCGCTCATCCCCATCTGGTGGAGGTGGTATTACTGGGGTTCTCCAGTTGCTTGGACCATCTATGGTATCTTCGGATCTCAAGTTGGGGACATGACAGCTGAAATCGATATGCCGACTGGGGATAAAGTAGCAATTAACAAATTCGTCAAGGCTTATTTAGGTTATGACTATGACTTCATGATCCCTGTTGTCATTGCTCATGTTGGTTGGGTCCTTCTCTTCTTCTTTGTCTTTGCCTATGGCATCAAGTTCCTCAACTTCCAAAGGAGATAA

Protein Analysis

1398

Amino Acids

158.66

Weight (kDa)

8.41

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 106 - 154 1.3e-08 ABC-transporter N-terminal
ABC_tran PF00005 180 - 361 7.6e-14 ABC transporter
ABC2_membrane_7 PF19055 395 - 448 6.5e-06 ABC-2 type transporter
ABC2_membrane PF01061 516 - 698 8.2e-33 ABC-2 type transporter
PDR_assoc PF08370 700 - 753 4.9e-22 Plant PDR ABC transporter associated
ABC_tran PF00005 824 - 976 4.1e-20 ABC transporter
ABC2_membrane PF01061 1121 - 1333 3.2e-55 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3171
AasI GACNNNNNNGTC 1 cut(s) 3099
AccB1I GGYRCC 1 cut(s) 2531
AccB7I CCANNNNNTGG 2 cut(s) 1707, 3939
AccBSI CCGCTC 3 cut(s) 169, 552, 3925
AccI GTMKAC 4 cut(s) 65, 1248, 1972, 3246
AccII CGCG 2 cut(s) 92, 3251
AccIII TCCGGA 1 cut(s) 785
AcoI YGGCCR 3 cut(s) 15, 682, 3844
AcsI RAATTY 4 cut(s) 689, 1703, 1860, 4061
AcuI CTGAAG 4 cut(s) 585, 2160, 2325, 3189
AcvI CACGTG 1 cut(s) 1262
AfaI GTAC 9 cut(s) 705, 1370, 1410, 1604, 1793, 2585, 2965, 3743, 3815
AfeI AGCGCT 1 cut(s) 2172
AfiI CCNNNNNNNGG 8 cut(s) 168, 602, 1707, 1828, 2927, 3311, 3738, 3939
AflII CTTAAG 1 cut(s) 1660
AflIII ACRYGT 1 cut(s) 99
AjiI CACGTC 1 cut(s) 100
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AloI GAACNNNNNNTCC 2 cut(s) 1483, 1515
Alw21I GWGCWC 4 cut(s) 150, 445, 1548, 1717
AlwNI CAGNNNCTG 1 cut(s) 3283
Ama87I CYCGRG 2 cut(s) 2608, 2640
Aor13HI TCCGGA 1 cut(s) 785
Aor51HI AGCGCT 1 cut(s) 2172
AoxI GGCC 8 cut(s) 15, 156, 682, 910, 1255, 2128, 2495, 3844
ApoI RAATTY 4 cut(s) 689, 1703, 1860, 4061
ArsI GACNNNNNNTTYG 2 cut(s) 3218, 3250
AseI ATTAAT 3 cut(s) 488, 1734, 3519
Asp700I GAANNNNTTC 3 cut(s) 3640, 3764, 3896
AspA2I CCTAGG 1 cut(s) 2077
AspLEI GCGC 2 cut(s) 94, 2173
AspS9I GGNCC 8 cut(s) 156, 590, 910, 1055, 1256, 3092, 3975, 4132
AsuHPI GGTGA 9 cut(s) 226, 501, 764, 998, 1423, 1525, 2252, 2860, 3142
AsuNHI GCTAGC 1 cut(s) 3563
AvaI CYCGRG 2 cut(s) 2608, 2640
AvaII GGWCC 5 cut(s) 590, 1055, 3092, 3975, 4132
AvrII CCTAGG 1 cut(s) 2077
AxyI CCTNAGG 1 cut(s) 2926
BalI TGGCCA 2 cut(s) 684, 3846
BanI GGYRCC 1 cut(s) 2531
BanII GRGCYC 5 cut(s) 150, 271, 445, 1548, 1717
BarI GAAGNNNNNNTAC 2 cut(s) 3752, 3784
BbrPI CACGTG 1 cut(s) 1262
BbsI GAAGAC 1 cut(s) 30
Bbv12I GWGCWC 4 cut(s) 150, 445, 1548, 1717
BceAI ACGGC 1 cut(s) 1469
BcgI CGANNNNNNTGC 2 cut(s) 55, 89
BciVI GTATCC 1 cut(s) 2977
BclI TGATCA 2 cut(s) 927, 3285
BfaI CTAG 8 cut(s) 837, 959, 2078, 2940, 3021, 3098, 3564, 3918
BfmI CTRYAG 2 cut(s) 1929, 3265
BfoI RGCGCY 1 cut(s) 2174
BfrI CTTAAG 1 cut(s) 1660
BfuI GTATCC 1 cut(s) 2977
BglI GCCNNNNNGGC 1 cut(s) 1849
BglII AGATCT 1 cut(s) 649
BlnI CCTAGG 1 cut(s) 2077
BlpI GCTNAGC 1 cut(s) 3296
BmcAI AGTACT 1 cut(s) 1370
Bme18I GGWCC 5 cut(s) 590, 1055, 3092, 3975, 4132
BmeT110I CYCGRG 2 cut(s) 2608, 2640
BmgBI CACGTC 1 cut(s) 100
BmgT120I GGNCC 8 cut(s) 156, 590, 910, 1055, 1256, 3092, 3975, 4132
BmiI GGNNCC 6 cut(s) 378, 808, 2050, 2533, 3309, 4133
BmrI ACTGGG 2 cut(s) 3964, 4047
BmsI GCATC 5 cut(s) 412, 871, 1798, 2926, 4173
BmtI GCTAGC 1 cut(s) 3567
BmuI ACTGGG 2 cut(s) 3964, 4047
BpiI GAAGAC 1 cut(s) 30
BplI GAGNNNNNCTC 8 cut(s) 2317, 2349, 2909, 2941, 3185, 3217, 3299, 3331
BpmI CTGGAG 5 cut(s) 500, 1032, 3424, 3499, 3948
Bpu10I CCTNAGC 2 cut(s) 270, 3666
Bpu1102I GCTNAGC 1 cut(s) 3296
BpuEI CTTGAG 7 cut(s) 134, 287, 929, 1295, 2102, 2319, 3984
Bsa29I ATCGAT 2 cut(s) 879, 4026
BsaAI YACGTR 1 cut(s) 1262
BsaBI GATNNNNATC 2 cut(s) 648, 1628
BsaI GGTCTC 2 cut(s) 2447, 3483
BsaJI CCNNGG 8 cut(s) 796, 1252, 1822, 2077, 2440, 3143, 3556, 3588
BsaWI WCCGGW 3 cut(s) 785, 1037, 3304
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 3063, 3093
Bsc4I CCNNNNNNNGG 8 cut(s) 168, 602, 1707, 1828, 2927, 3311, 3738, 3939
Bse21I CCTNAGG 1 cut(s) 2926
Bse3DI GCAATG 8 cut(s) 18, 229, 1773, 2004, 2871, 3216, 3574, 4113
Bse8I GATNNNNATC 2 cut(s) 648, 1628
BseAI TCCGGA 1 cut(s) 785
BseCI ATCGAT 2 cut(s) 879, 4026
BseDI CCNNGG 8 cut(s) 796, 1252, 1822, 2077, 2440, 3143, 3556, 3588
BseJI GATNNNNATC 2 cut(s) 648, 1628
BseLI CCNNNNNNNGG 8 cut(s) 168, 602, 1707, 1828, 2927, 3311, 3738, 3939
BseMI GCAATG 8 cut(s) 18, 229, 1773, 2004, 2871, 3216, 3574, 4113
BseRI GAGGAG 7 cut(s) 67, 124, 152, 155, 158, 208, 3084
BseYI CCCAGC 2 cut(s) 1679, 1827
BsgI GTGCAG 2 cut(s) 1173, 2989
Bsh1236I CGCG 2 cut(s) 92, 3251
Bsh1285I CGRYCG 1 cut(s) 65
BshFI GGCC 8 cut(s) 17, 158, 684, 912, 1257, 2130, 2497, 3846
BshNI GGYRCC 1 cut(s) 2531
BshVI ATCGAT 2 cut(s) 879, 4026
BsiEI CGRYCG 1 cut(s) 65
BsiHKAI GWGCWC 4 cut(s) 150, 445, 1548, 1717
BsiHKCI CYCGRG 2 cut(s) 2608, 2640
BsiSI CCGG 7 cut(s) 18, 49, 95, 786, 1038, 2535, 3305
BslFI GGGAC 3 cut(s) 679, 1696, 4022
BslI CCNNNNNNNGG 8 cut(s) 168, 602, 1707, 1828, 2927, 3311, 3738, 3939
BsmFI GGGAC 3 cut(s) 679, 1696, 4022
BsmI GAATGC 2 cut(s) 884, 2815
BsnI GGCC 8 cut(s) 17, 158, 684, 912, 1257, 2130, 2497, 3846
Bso31I GGTCTC 2 cut(s) 2447, 3483
BsoBI CYCGRG 2 cut(s) 2608, 2640
Bsp1286I GDGCHC 5 cut(s) 150, 271, 445, 1548, 1717
Bsp13I TCCGGA 1 cut(s) 785
Bsp1407I TGTACA 1 cut(s) 1602
Bsp1720I GCTNAGC 1 cut(s) 3296
BspANI GGCC 8 cut(s) 17, 158, 684, 912, 1257, 2130, 2497, 3846
BspDI ATCGAT 2 cut(s) 879, 4026
BspEI TCCGGA 1 cut(s) 785
BspFNI CGCG 2 cut(s) 92, 3251
BspHI TCATGA 3 cut(s) 888, 3438, 4098
BspLI GGNNCC 6 cut(s) 378, 808, 2050, 2533, 3309, 4133
BspMAI CTGCAG 1 cut(s) 1933
BspOI GCTAGC 1 cut(s) 3567
BspQI GCTCTTC 4 cut(s) 450, 1553, 2180, 3208
BspT107I GGYRCC 1 cut(s) 2531
BspTI CTTAAG 1 cut(s) 1660
BspTNI GGTCTC 2 cut(s) 2447, 3483
BsrBI CCGCTC 3 cut(s) 169, 552, 3925
BsrDI GCAATG 8 cut(s) 18, 229, 1773, 2004, 2871, 3216, 3574, 4113
BsrGI TGTACA 1 cut(s) 1602
BssECI CCNNGG 8 cut(s) 796, 1252, 1822, 2077, 2440, 3143, 3556, 3588
BssNAI GTATAC 2 cut(s) 1973, 3247
BssT1I CCWWGG 4 cut(s) 1252, 2077, 2440, 3556
Bst1107I GTATAC 2 cut(s) 1973, 3247
Bst6I CTCTTC 9 cut(s) 450, 1553, 2000, 2136, 2180, 2193, 2445, 3208, 4145
BstAFI CTTAAG 1 cut(s) 1660
BstAPI GCANNNNNTGC 2 cut(s) 1763, 3375
BstAUI TGTACA 1 cut(s) 1602
BstBAI YACGTR 1 cut(s) 1262
BstDSI CCRYGG 1 cut(s) 3588
BstEII GGTNACC 1 cut(s) 3148
BstENI CCTNNNNNAGG 1 cut(s) 600
BstFNI CGCG 2 cut(s) 92, 3251
BstH2I RGCGCY 1 cut(s) 2174
BstHHI GCGC 2 cut(s) 94, 2173
BstMCI CGRYCG 1 cut(s) 65
BstNSI RCATGY 3 cut(s) 1560, 2217, 2320
BstPI GGTNACC 1 cut(s) 3148
BstSFI CTRYAG 2 cut(s) 1929, 3265
BstUI CGCG 2 cut(s) 92, 3251
BstV2I GAAGAC 1 cut(s) 30
BstX2I RGATCY 5 cut(s) 649, 2230, 3322, 3495, 3995
BstXI CCANNNNNNTGG 3 cut(s) 2551, 2878, 3972
BstYI RGATCY 5 cut(s) 649, 2230, 3322, 3495, 3995
BstZ17I GTATAC 2 cut(s) 1973, 3247
Bsu15I ATCGAT 2 cut(s) 879, 4026
Bsu36I CCTNAGG 1 cut(s) 2926
BsuI GTATCC 1 cut(s) 2977
BsuRI GGCC 8 cut(s) 17, 158, 684, 912, 1257, 2130, 2497, 3846
BsuTUI ATCGAT 2 cut(s) 879, 4026
BtgI CCRYGG 1 cut(s) 3588
BtgZI GCGATG 1 cut(s) 2194
BtrI CACGTC 1 cut(s) 100
BtsI GCAGTG 1 cut(s) 614
BtsIMutI CAGTG 5 cut(s) 476, 614, 1871, 2976, 3391
CaiI CAGNNNCTG 1 cut(s) 3283
CciI TCATGA 3 cut(s) 888, 3438, 4098
CfoI GCGC 2 cut(s) 94, 2173
Cfr13I GGNCC 8 cut(s) 156, 590, 910, 1055, 1256, 3092, 3975, 4132
ClaI ATCGAT 2 cut(s) 879, 4026
CseI GACGC 2 cut(s) 2279, 2714
CsiI ACCWGGT 1 cut(s) 809
Csp6I GTAC 9 cut(s) 704, 1369, 1409, 1603, 1792, 2584, 2964, 3742, 3814
CviQI GTAC 9 cut(s) 704, 1369, 1409, 1603, 1792, 2584, 2964, 3742, 3814
DraI TTTAAA 2 cut(s) 1798, 1948
DrdI GACNNNNNNGTC 1 cut(s) 3099
DseDI GACNNNNNNGTC 1 cut(s) 3099
EaeI YGGCCR 3 cut(s) 15, 682, 3844
Eam1104I CTCTTC 9 cut(s) 450, 1553, 2000, 2136, 2180, 2193, 2445, 3208, 4145
EarI CTCTTC 9 cut(s) 450, 1553, 2000, 2136, 2180, 2193, 2445, 3208, 4145
Ecl136II GAGCTC 4 cut(s) 148, 443, 1546, 1715
Eco130I CCWWGG 4 cut(s) 1252, 2077, 2440, 3556
Eco147I AGGCCT 1 cut(s) 2130
Eco24I GRGCYC 5 cut(s) 150, 271, 445, 1548, 1717
Eco31I GGTCTC 2 cut(s) 2447, 3483
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 5 cut(s) 590, 1055, 3092, 3975, 4132
Eco47III AGCGCT 1 cut(s) 2172
Eco53kI GAGCTC 4 cut(s) 148, 443, 1546, 1715
Eco57I CTGAAG 4 cut(s) 585, 2160, 2325, 3189
Eco72I CACGTG 1 cut(s) 1262
Eco81I CCTNAGG 1 cut(s) 2926
Eco88I CYCGRG 2 cut(s) 2608, 2640
Eco91I GGTNACC 1 cut(s) 3148
EcoICRI GAGCTC 4 cut(s) 148, 443, 1546, 1715
EcoNI CCTNNNNNAGG 1 cut(s) 600
EcoO109I RGGNCCY 1 cut(s) 4132
EcoO65I GGTNACC 1 cut(s) 3148
EcoRI GAATTC 1 cut(s) 1860
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 4 cut(s) 1252, 2077, 2440, 3556
EcoT22I ATGCAT 2 cut(s) 240, 886
EcoT38I GRGCYC 5 cut(s) 150, 271, 445, 1548, 1717
ErhI CCWWGG 4 cut(s) 1252, 2077, 2440, 3556
FaqI GGGAC 3 cut(s) 679, 1696, 4022
FauI CCCGC 2 cut(s) 69, 3625
FauNDI CATATG 3 cut(s) 1201, 1290, 1889
FbaI TGATCA 2 cut(s) 927, 3285
FblI GTMKAC 4 cut(s) 65, 1248, 1972, 3246
FriOI GRGCYC 5 cut(s) 150, 271, 445, 1548, 1717
FspBI CTAG 8 cut(s) 837, 959, 2078, 2940, 3021, 3098, 3564, 3918
GlaI GCGC 2 cut(s) 93, 2172
GsaI CCCAGC 2 cut(s) 1683, 1831
GsuI CTGGAG 5 cut(s) 500, 1032, 3424, 3499, 3948
HaeII RGCGCY 1 cut(s) 2174
HaeIII GGCC 8 cut(s) 17, 158, 684, 912, 1257, 2130, 2497, 3846
HapII CCGG 7 cut(s) 18, 49, 95, 786, 1038, 2535, 3305
HgaI GACGC 2 cut(s) 2279, 2714
HhaI GCGC 2 cut(s) 94, 2173
Hin6I GCGC 2 cut(s) 92, 2171
HinP1I GCGC 2 cut(s) 92, 2171
HincII GTYRAC 3 cut(s) 66, 207, 1451
HindII GTYRAC 3 cut(s) 66, 207, 1451
HindIII AAGCTT 2 cut(s) 3039, 3116
HpaII CCGG 7 cut(s) 18, 49, 95, 786, 1038, 2535, 3305
HphI GGTGA 9 cut(s) 226, 501, 764, 998, 1423, 1525, 2252, 2860, 3142
Hpy166II GTNNAC 9 cut(s) 66, 207, 1249, 1451, 1603, 1792, 1973, 3247, 3744
Hpy8I GTNNAC 9 cut(s) 66, 207, 1249, 1451, 1603, 1792, 1973, 3247, 3744
Hpy99I CGWCG 3 cut(s) 70, 517, 2295
HpyCH4IV ACGT 3 cut(s) 99, 790, 1261
HpySE526I ACGT 3 cut(s) 99, 790, 1261
HspAI GCGC 2 cut(s) 92, 2171
Kpn2I TCCGGA 1 cut(s) 785
Ksp22I TGATCA 2 cut(s) 927, 3285
LguI GCTCTTC 4 cut(s) 450, 1553, 2180, 3208
LweI GCATC 5 cut(s) 412, 871, 1798, 2926, 4173
MabI ACCWGGT 1 cut(s) 809
MaeI CTAG 8 cut(s) 837, 959, 2078, 2940, 3021, 3098, 3564, 3918
MaeII ACGT 3 cut(s) 99, 790, 1261
MaeIII GTNAC 9 cut(s) 574, 670, 986, 1030, 1342, 1589, 2651, 3079, 3148
MbiI CCGCTC 3 cut(s) 169, 552, 3925
MfeI CAATTG 3 cut(s) 1641, 2043, 3861
MflI RGATCY 5 cut(s) 649, 2230, 3322, 3495, 3995
MhlI GDGCHC 5 cut(s) 150, 271, 445, 1548, 1717
MlsI TGGCCA 2 cut(s) 684, 3846
MluNI TGGCCA 2 cut(s) 684, 3846
MlyI GAGTC 3 cut(s) 202, 336, 498
MmeI TCCRAC 8 cut(s) 473, 481, 784, 1033, 1560, 1857, 2146, 2800
Mox20I TGGCCA 2 cut(s) 684, 3846
Mph1103I ATGCAT 2 cut(s) 240, 886
MroI TCCGGA 1 cut(s) 785
MroXI GAANNNNTTC 3 cut(s) 3640, 3764, 3896
MscI TGGCCA 2 cut(s) 684, 3846
MslI CAYNNNNRTG 9 cut(s) 750, 902, 1631, 2321, 2549, 2876, 2909, 2957, 3788
Msp20I TGGCCA 2 cut(s) 684, 3846
MspA1I CMGCKG 4 cut(s) 2649, 2948, 3632, 4019
MspCI CTTAAG 1 cut(s) 1660
MspI CCGG 7 cut(s) 18, 49, 95, 786, 1038, 2535, 3305
MunI CAATTG 3 cut(s) 1641, 2043, 3861
Mva1269I GAATGC 2 cut(s) 884, 2815
MvnI CGCG 2 cut(s) 92, 3251
NdeI CATATG 3 cut(s) 1201, 1290, 1889
NheI GCTAGC 1 cut(s) 3563
NlaIV GGNNCC 6 cut(s) 378, 808, 2050, 2533, 3309, 4133
NmuCI GTSAC 4 cut(s) 986, 1342, 3079, 3148
NsiI ATGCAT 2 cut(s) 240, 886
NspI RCATGY 3 cut(s) 1560, 2217, 2320
PaeI GCATGC 1 cut(s) 2217
PagI TCATGA 3 cut(s) 888, 3438, 4098
PceI AGGCCT 1 cut(s) 2130
PciSI GCTCTTC 4 cut(s) 450, 1553, 2180, 3208
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 2 cut(s) 884, 2815
PdmI GAANNNNTTC 3 cut(s) 3640, 3764, 3896
PfeI GAWTC 8 cut(s) 259, 396, 851, 1296, 1694, 1880, 2699, 3010
PflFI GACNNNGTC 1 cut(s) 2786
PflMI CCANNNNNTGG 2 cut(s) 1707, 3939
PfoI TCCNGGA 1 cut(s) 2827
PleI GAGTC 3 cut(s) 202, 336, 498
PmaCI CACGTG 1 cut(s) 1262
PmlI CACGTG 1 cut(s) 1262
PpsI GAGTC 3 cut(s) 202, 336, 498
Ppu21I YACGTR 1 cut(s) 1262
PpuMI RGGWCCY 1 cut(s) 4132
PshBI ATTAAT 3 cut(s) 488, 1734, 3519
PsiI TTATAA 1 cut(s) 3171
Psp124BI GAGCTC 4 cut(s) 150, 445, 1548, 1717
Psp5II RGGWCCY 1 cut(s) 4132
PspCI CACGTG 1 cut(s) 1262
PspEI GGTNACC 1 cut(s) 3148
PspFI CCCAGC 2 cut(s) 1679, 1827
PspN4I GGNNCC 6 cut(s) 378, 808, 2050, 2533, 3309, 4133
PspPI GGNCC 8 cut(s) 156, 590, 910, 1055, 1256, 3092, 3975, 4132
PspPPI RGGWCCY 1 cut(s) 4132
PsrI GAACNNNNNNTAC 2 cut(s) 1376, 1408
PstI CTGCAG 1 cut(s) 1933
PstNI CAGNNNCTG 1 cut(s) 3283
PsuI RGATCY 5 cut(s) 649, 2230, 3322, 3495, 3995
PsyI GACNNNGTC 1 cut(s) 2786
PvuII CAGCTG 2 cut(s) 2948, 4019
RsaI GTAC 9 cut(s) 705, 1370, 1410, 1604, 1793, 2585, 2965, 3743, 3815
RsaNI GTAC 9 cut(s) 704, 1369, 1409, 1603, 1792, 2584, 2964, 3742, 3814
RseI CAYNNNNRTG 9 cut(s) 750, 902, 1631, 2321, 2549, 2876, 2909, 2957, 3788
SacI GAGCTC 4 cut(s) 150, 445, 1548, 1717
SalI GTCGAC 1 cut(s) 64
SapI GCTCTTC 4 cut(s) 450, 1553, 2180, 3208
Sau96I GGNCC 8 cut(s) 156, 590, 910, 1055, 1256, 3092, 3975, 4132
ScaI AGTACT 1 cut(s) 1370
SchI GAGTC 3 cut(s) 202, 336, 498
SduI GDGCHC 5 cut(s) 150, 271, 445, 1548, 1717
SexAI ACCWGGT 1 cut(s) 809
SfaNI GCATC 5 cut(s) 412, 871, 1798, 2926, 4173
SfcI CTRYAG 2 cut(s) 1929, 3265
SinI GGWCC 5 cut(s) 590, 1055, 3092, 3975, 4132
SmiMI CAYNNNNRTG 9 cut(s) 750, 902, 1631, 2321, 2549, 2876, 2909, 2957, 3788
SmlI CTYRAG 8 cut(s) 149, 302, 944, 1274, 1660, 2117, 2334, 3999
SmoI CTYRAG 8 cut(s) 149, 302, 944, 1274, 1660, 2117, 2334, 3999
SphI GCATGC 1 cut(s) 2217
SseBI AGGCCT 1 cut(s) 2130
SspI AATATT 1 cut(s) 3128
SspMI CTAG 8 cut(s) 837, 959, 2078, 2940, 3021, 3098, 3564, 3918
SstI GAGCTC 4 cut(s) 150, 445, 1548, 1717
StuI AGGCCT 1 cut(s) 2130
StyI CCWWGG 4 cut(s) 1252, 2077, 2440, 3556
TaiI ACGT 3 cut(s) 102, 793, 1264
TaqI TCGA 8 cut(s) 41, 65, 394, 515, 642, 879, 2790, 4026
TatI WGTACW 3 cut(s) 1368, 1602, 1791
TauI GCSGC 2 cut(s) 8, 161
TfiI GAWTC 8 cut(s) 259, 396, 851, 1296, 1694, 1880, 2699, 3010
TscAI CASTG 5 cut(s) 483, 621, 1878, 2983, 3398
TseFI GTSAC 4 cut(s) 986, 1342, 3079, 3148
Tsp45I GTSAC 4 cut(s) 986, 1342, 3079, 3148
TspGWI ACGGA 6 cut(s) 1682, 1764, 1988, 2762, 3577, 3831
TspRI CASTG 5 cut(s) 483, 621, 1878, 2983, 3398
Tth111I GACNNNGTC 1 cut(s) 2786
Van91I CCANNNNNTGG 2 cut(s) 1707, 3939
Vha464I CTTAAG 1 cut(s) 1660
VpaK11BI GGWCC 5 cut(s) 590, 1055, 3092, 3975, 4132
VspI ATTAAT 3 cut(s) 488, 1734, 3519
XagI CCTNNNNNAGG 1 cut(s) 600
XapI RAATTY 4 cut(s) 689, 1703, 1860, 4061
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 3 cut(s) 1560, 2217, 2320
XcmI CCANNNNNNNNNTGG 1 cut(s) 2356
XmaJI CCTAGG 1 cut(s) 2077
XmiI GTMKAC 4 cut(s) 65, 1248, 1972, 3246
XmnI GAANNNNTTC 3 cut(s) 3640, 3764, 3896
XspI CTAG 8 cut(s) 837, 959, 2078, 2940, 3021, 3098, 3564, 3918
ZrmI AGTACT 1 cut(s) 1370
Zsp2I ATGCAT 2 cut(s) 240, 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.