pycom12g01980
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
1681059 .. 1685646
4588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g01980.2

Sequence Viewer

Length: 2661 bp
ATGGCGGCCACTTCGGTGAGCGACGATCTGGCCCAGTCGACAAGCAGCCGGAGAAGCTTGGGGTTGGGAAGCAAGAGGAGCTGGGCGTCCACAAGTTTCGGTGAAGTGTGGCAGGCGCCGCCGGATGTGTTCAACAGGAGTGGGCGGCAGGATGAGGAGGAGGAGCTGCGGTGGGCGGCGATCGAGCGGCTGCCGACGTATGACAGGTTGAAAAGAGGGATGCTGAGGCGGGTCCTGGACAATGGGAGGGTGGTGACTGATGAGGTGGACGTGACGAAGCTGGGAATGCAGGACAGGAAGCAGTTGATGGAGAGTATACTGAAGGTTGTGGGAGATGATAACGAAAGGTTCTTGAGAAGCCTTAGGGACAGAACTGATAGTGTGGGGATCGAAATTCCGAAGATTGAAGTCCGATATGAGAACTTGTCTATAGATGGGGATGTGTATGTTGGGAGCAGGGCATTGCCTACTCTACTTAATGCTACCTTGAACACCATTGAGAGTGTTCTGGGATTAATTAAGCTTGCTCCATCAAAAAAGAGAAAGATCCAGATACTTAAAGATGTCAGTGGAATCGTCAGACCTTCCAGGATGACCCTACTTTTGGGTCCTCCAGGTGCAGGCAAAACTACCTTGTTACTAGCACTTGCAGGAAAGCTTGATGATGATCTAAGAGTTTCTGGGAAAGTCACATATTGTGGCCATGAACTGCATGAGTTTGTTCCTAGAAGAACATGTGCTTACATTAGTCAGCATGATCTTCACTGTGGAGAAATGACAGTGAGAGAGACGTTGGATTTCTCGGGACGTTGTTTAGGTGTCGGAACTCGATACCAAATACTGGTTGAACTCTCAAGAAGAGAGAAAGAAGCCGGAATCAAGCCAGACCCCGAGATTGATGCATTCATGAAAGCCACCTCAGTCTCAGGCCAGAAGACTAGTTTGGTCACAGATTATGTTCTCAAGATACTTGGATTGGATACCTGTGCTGATATCTTGGTTGGTGATGATATGAGGAGGGGTATTTCCGGTGGCCAGAAAAAACGCCTGACCACCGGGGAGATGTTGGTAGGACCAGCAAAGGTTCTTCTGATGGATGAAATATCAACAGGGTTAGACAGTTCCACAACTTTTCAGATATGCAGATACATGAGGCAATTGGTTCACATAATGGATGTTACCATGGTCATCTCTCTTCTGCAGCCTGCGCCGGAGACATTTGAGCTCTTTGATGACCTAATCCTGCTTTCGGAAGGGCAAATCGTGTACCAAGGTCTGCGCGAGAATGTCCTCGAGTTCTTCGAATGCATGGGATTCAAGTGCCCAGAGAGGAAAGGAGTTGTTGATTTTTTGCAAGAAGTGACATCCAGGAAGGACCAAGAGCAGTATTGGTTAAAAAAAGGTCAACCTTACAGATATATTTCGGTTCCTGAGTTCGTGGAGGCCTTCAACTCTTTTCGAATTGGCCAACAGCTTGTAGCTGATCTCGGAGTTCCTTACGAGAAGTCCAGAGCTCATCCGGCTGCATTGGTCACAAAGAAGTATGGCATTTCAAACTGGGAATTGTTCAAGGCATGTTTTTCGAGGGAGTGGCTGCTAATGAAGCGCAATTCGTTCGTGTACATATTTAAGACCACGCAGATAACGATAATGTCATTGATCGCCTTGACTGTGTTCTTTAGAACAGAAATGCCTGTGGGGACAGTAAAAGATGGAGGGAAATTTTTTGGAGCACTGTTCTTCAGTCTGATCAATGTAATGTTTAATGGTATGGCAGAACTGGCAATGACTGTTTTCAGACTTCCTGTTTTCTATAAGCAGAGGGATTTCTTGTTTTATCCTGCATGGGCTTTCGGATTACCAATTTGGGTCCTTAGGATCCCGCTTTCGTTCATGGAATCTGGGATTTGGATCATTCTTACCTATTACACCATTGGATTTGCGCCAGCAGCTAGCAGATTTTTCAAACAGTTATTGGCATTCTTTGGCATACATCAGATGGCTCTATCCCTCTTTCGATTCATTGCTGCACTTGGAAGAACACAAGTTGTTGCCAACACGCTTGGTGTTTTTACCTTGCTAATGGTATTCGTTCTGGGAGGATTTATTGTTTCCAAAAATGACCTTGAGCCTTGGGTGCTATGGGGCTGCTACATTTTCCCTATGATGTATGGACAGAATGCGATCGTCATGAATGAATTCCTTGACAAAAGATGGAGCGCACCAAATACAGATCGAAGAATTAACGCAACTACAGTCGGGGAAGTCCTCCTCAAGTCTAAAGGATTCTTCACAGATGAATACTGGTTTTGGATATGTATTGGAGCACTATTTGGTTTTTCTCTCCTCTTCAACATTTTGTTCATTGCAGCATTGACTTTTCTGAACCCTCTTGGGGATGCAAAAGCTGTCGTATCTGATGAAGAAAGTGGAGGAAAGAGAAAGAAGTCATTAAGTGAAGAAATGACAGTGAAAAGTTCTTCAGAAATTGTTGGTGATTCAGATCATGCACCAAAGAAAGGAATGGCTTTGCCCTTCCAACCCCTTTCGCTTGTGTTTAACCATGTGAACTACTTCGTGGATATGCCCTCTGAAATGAAGACTCATGGAGTTCTAGAACGATCGCCTTCAATTACTACGAGATGTCTGTGGTGTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

887

Amino Acids

100.04

Weight (kDa)

8.56

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 115
AccB7I CCANNNNNTGG 1 cut(s) 841
AccBSI CCGCTC 1 cut(s) 187
AccI GTMKAC 2 cut(s) 38, 316
AccII CGCG 1 cut(s) 1281
AciI CCGC 8 cut(s) 5, 119, 145, 169, 176, 187, 229, 1883
AclWI GGATC 5 cut(s) 395, 541, 1873, 1886, 1919
AcoI YGGCCR 4 cut(s) 6, 700, 1033, 1465
AcsI RAATTY 3 cut(s) 393, 1721, 2198
AcuI CTGAAG 3 cut(s) 341, 1726, 2466
AcyI GRCGYC 2 cut(s) 86, 116
AfaI GTAC 2 cut(s) 1268, 1622
AfiI CCNNNNNNNGG 6 cut(s) 604, 620, 841, 1249, 2395, 2519
AflIII ACRYGT 1 cut(s) 734
AhlI ACTAGT 1 cut(s) 938
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 4 cut(s) 234, 587, 613, 1367
AjuI GAANNNNNNNTTGG 2 cut(s) 926, 958
AleI CACNNNNGTG 1 cut(s) 14
Alw21I GWGCWC 4 cut(s) 1227, 1516, 1735, 2329
Alw26I GTCTC 3 cut(s) 782, 928, 1208
AlwI GGATC 5 cut(s) 395, 541, 1873, 1886, 1919
Ama87I CYCGRG 3 cut(s) 802, 890, 1292
AoxI GGCC 7 cut(s) 6, 30, 700, 928, 1033, 1443, 1465
ApoI RAATTY 3 cut(s) 393, 1721, 2198
ArsI GACNNNNNNTTYG 2 cut(s) 586, 618
AseI ATTAAT 1 cut(s) 515
Asp700I GAANNNNTTC 2 cut(s) 2198, 2573
AspLEI GCGC 6 cut(s) 118, 1210, 1281, 1608, 1945, 2222
AspS9I GGNCC 6 cut(s) 31, 232, 608, 1073, 1375, 1870
AsuC2I CCSGG 1 cut(s) 1057
AsuHPI GGTGA 5 cut(s) 28, 113, 265, 1016, 2507
AsuII TTCGAA 2 cut(s) 1302, 1459
AsuNHI GCTAGC 1 cut(s) 1952
AvaI CYCGRG 3 cut(s) 802, 890, 1292
AvaII GGWCC 5 cut(s) 232, 608, 1073, 1375, 1870
AxyI CCTNAGG 2 cut(s) 362, 1874
BaeGI GKGCMC 1 cut(s) 1325
BalI TGGCCA 3 cut(s) 702, 1035, 1467
BamHI GGATCC 1 cut(s) 1878
BanI GGYRCC 1 cut(s) 115
BanII GRGCYC 2 cut(s) 1227, 1516
BbsI GAAGAC 2 cut(s) 941, 2606
Bbv12I GWGCWC 4 cut(s) 1227, 1516, 1735, 2329
BbvCI CCTCAGC 1 cut(s) 224
BccI CCATC 7 cut(s) 301, 428, 538, 1087, 1706, 1993, 2208
BcgI CGANNNNNNTGC 6 cut(s) 881, 915, 1563, 1597, 1597, 1631
BciT130I CCWGG 4 cut(s) 236, 589, 615, 1369
BciVI GTATCC 1 cut(s) 973
BclI TGATCA 1 cut(s) 1749
BcnI CCSGG 1 cut(s) 1057
BcoDI GTCTC 3 cut(s) 782, 928, 1208
BcuI ACTAGT 1 cut(s) 938
BfaI CTAG 5 cut(s) 641, 726, 939, 1953, 2615
BfmI CTRYAG 3 cut(s) 429, 1199, 2253
BfoI RGCGCY 1 cut(s) 119
BfuI GTATCC 1 cut(s) 973
Bme1390I CCNGG 5 cut(s) 236, 589, 615, 1057, 1369
Bme18I GGWCC 5 cut(s) 232, 608, 1073, 1375, 1870
BmeT110I CYCGRG 3 cut(s) 802, 890, 1292
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 6 cut(s) 31, 232, 608, 1073, 1375, 1870
BmiI GGNNCC 6 cut(s) 117, 233, 609, 1428, 1871, 1880
BmrFI CCNGG 5 cut(s) 236, 589, 615, 1057, 1369
BmrI ACTGGG 2 cut(s) 28, 1567
BmsI GCATC 3 cut(s) 210, 889, 2389
BmtI GCTAGC 1 cut(s) 1956
BmuI ACTGGG 2 cut(s) 28, 1567
BpiI GAAGAC 2 cut(s) 941, 2606
BpmI CTGGAG 1 cut(s) 597
Bpu10I CCTNAGC 1 cut(s) 224
Bpu14I TTCGAA 2 cut(s) 1302, 1459
BpuEI CTTGAG 5 cut(s) 373, 838, 947, 2147, 2258
BpuMI CCSGG 1 cut(s) 1057
BsaBI GATNNNNATC 3 cut(s) 666, 1910, 2502
BsaHI GRCGYC 2 cut(s) 86, 116
BsaJI CCNNGG 4 cut(s) 1056, 1182, 1270, 2132
BsaWI WCCGGW 1 cut(s) 1028
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 6 cut(s) 604, 620, 841, 1249, 2395, 2519
Bse1I ACTGG 5 cut(s) 34, 846, 1562, 1785, 2309
Bse21I CCTNAGG 2 cut(s) 362, 1874
Bse3DI GCAATG 4 cut(s) 461, 1791, 2022, 2364
Bse8I GATNNNNATC 3 cut(s) 666, 1910, 2502
BseBI CCWGG 4 cut(s) 236, 589, 615, 1369
BseDI CCNNGG 4 cut(s) 1056, 1182, 1270, 2132
BseJI GATNNNNATC 3 cut(s) 666, 1910, 2502
BseLI CCNNNNNNNGG 6 cut(s) 604, 620, 841, 1249, 2395, 2519
BseMI GCAATG 4 cut(s) 461, 1791, 2022, 2364
BseMII CTCAG 4 cut(s) 215, 933, 939, 1422
BseNI ACTGG 5 cut(s) 34, 846, 1562, 1785, 2309
BseRI GAGGAG 7 cut(s) 91, 170, 173, 176, 1030, 2261, 2336
BseSI GKGCMC 1 cut(s) 1325
BseYI CCCAGC 2 cut(s) 81, 280
BsgI GTGCAG 2 cut(s) 639, 2013
Bsh1236I CGCG 1 cut(s) 1281
Bsh1285I CGRYCG 3 cut(s) 183, 2187, 2624
BshFI GGCC 7 cut(s) 8, 32, 702, 930, 1035, 1445, 1467
BshNI GGYRCC 1 cut(s) 115
BsiEI CGRYCG 3 cut(s) 183, 2187, 2624
BsiHKAI GWGCWC 4 cut(s) 1227, 1516, 1735, 2329
BsiHKCI CYCGRG 3 cut(s) 802, 890, 1292
BsiSI CCGG 7 cut(s) 49, 122, 873, 1029, 1056, 1211, 1520
BslFI GGGAC 3 cut(s) 380, 819, 1714
BslI CCNNNNNNNGG 6 cut(s) 604, 620, 841, 1249, 2395, 2519
BsmAI GTCTC 3 cut(s) 782, 928, 1208
BsmBI CGTCTC 1 cut(s) 782
BsmFI GGGAC 3 cut(s) 380, 819, 1714
BsmI GAATGC 5 cut(s) 291, 902, 1310, 1979, 2185
BsnI GGCC 7 cut(s) 8, 32, 702, 930, 1035, 1445, 1467
BsoBI CYCGRG 3 cut(s) 802, 890, 1292
Bsp119I TTCGAA 2 cut(s) 1302, 1459
Bsp1286I GDGCHC 5 cut(s) 1227, 1325, 1516, 1735, 2329
Bsp1407I TGTACA 1 cut(s) 1620
Bsp19I CCATGG 1 cut(s) 1182
BspACI CCGC 8 cut(s) 5, 119, 145, 169, 176, 187, 229, 1883
BspANI GGCC 7 cut(s) 8, 32, 702, 930, 1035, 1445, 1467
BspCNI CTCAG 4 cut(s) 216, 932, 938, 1423
BspFNI CGCG 1 cut(s) 1281
BspHI TCATGA 2 cut(s) 906, 2190
BspLI GGNNCC 6 cut(s) 117, 233, 609, 1428, 1871, 1880
BspMAI CTGCAG 1 cut(s) 1203
BspOI GCTAGC 1 cut(s) 1956
BspPI GGATC 5 cut(s) 395, 541, 1873, 1886, 1919
BspT104I TTCGAA 2 cut(s) 1302, 1459
BspT107I GGYRCC 1 cut(s) 115
BsrBI CCGCTC 1 cut(s) 187
BsrDI GCAATG 4 cut(s) 461, 1791, 2022, 2364
BsrGI TGTACA 1 cut(s) 1620
BsrI ACTGG 5 cut(s) 34, 846, 1562, 1785, 2309
BssECI CCNNGG 4 cut(s) 1056, 1182, 1270, 2132
BssNAI GTATAC 1 cut(s) 317
BssNI GRCGYC 2 cut(s) 86, 116
BssT1I CCWWGG 3 cut(s) 1182, 1270, 2132
Bst1107I GTATAC 1 cut(s) 317
Bst2UI CCWGG 4 cut(s) 236, 589, 615, 1369
Bst6I CTCTTC 3 cut(s) 853, 1200, 2354
BstACI GRCGYC 2 cut(s) 86, 116
BstAUI TGTACA 1 cut(s) 1620
BstBI TTCGAA 2 cut(s) 1302, 1459
BstC8I GCNNGC 6 cut(s) 114, 525, 622, 1206, 1947, 1954
BstDEI CTNAG 7 cut(s) 224, 362, 671, 919, 925, 1431, 1874
BstDSI CCRYGG 1 cut(s) 1182
BstFNI CGCG 1 cut(s) 1281
BstH2I RGCGCY 1 cut(s) 119
BstHHI GCGC 6 cut(s) 118, 1210, 1281, 1608, 1945, 2222
BstMAI GTCTC 3 cut(s) 782, 928, 1208
BstMCI CGRYCG 3 cut(s) 183, 2187, 2624
BstNI CCWGG 4 cut(s) 236, 589, 615, 1369
BstNSI RCATGY 2 cut(s) 738, 1578
BstSCI CCNGG 5 cut(s) 234, 587, 613, 1055, 1367
BstSFI CTRYAG 3 cut(s) 429, 1199, 2253
BstSLI GKGCMC 1 cut(s) 1325
BstUI CGCG 1 cut(s) 1281
BstV2I GAAGAC 2 cut(s) 941, 2606
BstX2I RGATCY 2 cut(s) 546, 1878
BstYI RGATCY 2 cut(s) 546, 1878
BstZ17I GTATAC 1 cut(s) 317
Bsu36I CCTNAGG 2 cut(s) 362, 1874
BsuI GTATCC 1 cut(s) 973
BsuRI GGCC 7 cut(s) 8, 32, 702, 930, 1035, 1445, 1467
BtgI CCRYGG 1 cut(s) 1182
BtrI CACGTC 1 cut(s) 271
BtsIMutI CAGTG 5 cut(s) 574, 763, 786, 1733, 2475
Cac8I GCNNGC 6 cut(s) 114, 525, 622, 1206, 1947, 1954
CciI TCATGA 2 cut(s) 906, 2190
CfoI GCGC 6 cut(s) 118, 1210, 1281, 1608, 1945, 2222
Cfr13I GGNCC 6 cut(s) 31, 232, 608, 1073, 1375, 1870
CseI GACGC 1 cut(s) 75
Csp6I GTAC 2 cut(s) 1267, 1621
CspCI CAANNNNNGTGG 2 cut(s) 121, 156
CviQI GTAC 2 cut(s) 1267, 1621
DdeI CTNAG 7 cut(s) 224, 362, 671, 919, 925, 1431, 1874
DinI GGCGCC 1 cut(s) 117
EaeI YGGCCR 4 cut(s) 6, 700, 1033, 1465
Eam1104I CTCTTC 3 cut(s) 853, 1200, 2354
EarI CTCTTC 3 cut(s) 853, 1200, 2354
Ecl136II GAGCTC 2 cut(s) 1225, 1514
Eco130I CCWWGG 3 cut(s) 1182, 1270, 2132
Eco147I AGGCCT 1 cut(s) 1445
Eco24I GRGCYC 2 cut(s) 1227, 1516
Eco32I GATATC 1 cut(s) 994
Eco47I GGWCC 5 cut(s) 232, 608, 1073, 1375, 1870
Eco53kI GAGCTC 2 cut(s) 1225, 1514
Eco57I CTGAAG 3 cut(s) 341, 1726, 2466
Eco81I CCTNAGG 2 cut(s) 362, 1874
Eco88I CYCGRG 3 cut(s) 802, 890, 1292
EcoICRI GAGCTC 2 cut(s) 1225, 1514
EcoO109I RGGNCCY 3 cut(s) 232, 608, 1870
EcoRI GAATTC 1 cut(s) 2198
EcoRII CCWGG 4 cut(s) 234, 587, 613, 1367
EcoRV GATATC 1 cut(s) 994
EcoT14I CCWWGG 3 cut(s) 1182, 1270, 2132
EcoT22I ATGCAT 2 cut(s) 904, 1310
EcoT38I GRGCYC 2 cut(s) 1227, 1516
EgeI GGCGCC 1 cut(s) 117
EheI GGCGCC 1 cut(s) 117
ErhI CCWWGG 3 cut(s) 1182, 1270, 2132
Esp3I CGTCTC 1 cut(s) 782
FaqI GGGAC 3 cut(s) 380, 819, 1714
FauI CCCGC 2 cut(s) 222, 1890
FbaI TGATCA 1 cut(s) 1749
FblI GTMKAC 2 cut(s) 38, 316
FriOI GRGCYC 2 cut(s) 1227, 1516
FspBI CTAG 5 cut(s) 641, 726, 939, 1953, 2615
GlaI GCGC 6 cut(s) 117, 1209, 1280, 1607, 1944, 2221
GsaI CCCAGC 2 cut(s) 85, 284
GsuI CTGGAG 1 cut(s) 597
HaeII RGCGCY 1 cut(s) 119
HaeIII GGCC 7 cut(s) 8, 32, 702, 930, 1035, 1445, 1467
HapII CCGG 7 cut(s) 49, 122, 873, 1029, 1056, 1211, 1520
HgaI GACGC 1 cut(s) 75
HhaI GCGC 6 cut(s) 118, 1210, 1281, 1608, 1945, 2222
Hin1I GRCGYC 2 cut(s) 86, 116
Hin6I GCGC 6 cut(s) 116, 1208, 1279, 1606, 1943, 2220
HinP1I GCGC 6 cut(s) 116, 1208, 1279, 1606, 1943, 2220
HincII GTYRAC 2 cut(s) 39, 1406
HindII GTYRAC 2 cut(s) 39, 1406
HindIII AAGCTT 3 cut(s) 55, 521, 656
HinfI GANTC 8 cut(s) 573, 876, 1314, 1898, 2019, 2286, 2498, 2602
HpaII CCGG 7 cut(s) 49, 122, 873, 1029, 1056, 1211, 1520
HphI GGTGA 5 cut(s) 28, 113, 265, 1016, 2507
Hpy166II GTNNAC 9 cut(s) 39, 90, 268, 317, 1165, 1267, 1406, 1621, 2569
Hpy8I GTNNAC 9 cut(s) 39, 90, 268, 317, 1165, 1267, 1406, 1621, 2569
Hpy99I CGWCG 2 cut(s) 26, 199
HpyAV CCTTC 7 cut(s) 316, 594, 1247, 1366, 1456, 2545, 2637
HpyCH4IV ACGT 4 cut(s) 197, 270, 791, 808
HpyF3I CTNAG 7 cut(s) 224, 362, 671, 919, 925, 1431, 1874
HpySE526I ACGT 4 cut(s) 197, 270, 791, 808
Hsp92I GRCGYC 2 cut(s) 86, 116
HspAI GCGC 6 cut(s) 116, 1208, 1279, 1606, 1943, 2220
KasI GGCGCC 1 cut(s) 115
Ksp22I TGATCA 1 cut(s) 1749
LmnI GCTCC 7 cut(s) 78, 163, 453, 532, 1730, 2217, 2324
LweI GCATC 3 cut(s) 210, 889, 2389
MaeI CTAG 5 cut(s) 641, 726, 939, 1953, 2615
MaeII ACGT 4 cut(s) 197, 270, 791, 808
MaeIII GTNAC 8 cut(s) 253, 271, 636, 688, 946, 1177, 1360, 1531
MbiI CCGCTC 1 cut(s) 187
MfeI CAATTG 1 cut(s) 1157
MflI RGATCY 2 cut(s) 546, 1878
MhlI GDGCHC 5 cut(s) 1227, 1325, 1516, 1735, 2329
MlsI TGGCCA 3 cut(s) 702, 1035, 1467
MluNI TGGCCA 3 cut(s) 702, 1035, 1467
Mly113I GGCGCC 1 cut(s) 116
MlyI GAGTC 1 cut(s) 2596
MmeI TCCRAC 3 cut(s) 774, 802, 2563
Mox20I TGGCCA 3 cut(s) 702, 1035, 1467
Mph1103I ATGCAT 2 cut(s) 904, 1310
MroXI GAANNNNTTC 2 cut(s) 2198, 2573
MscI TGGCCA 3 cut(s) 702, 1035, 1467
MslI CAYNNNNRTG 1 cut(s) 14
Msp20I TGGCCA 3 cut(s) 702, 1035, 1467
MspI CCGG 7 cut(s) 49, 122, 873, 1029, 1056, 1211, 1520
MspR9I CCNGG 5 cut(s) 236, 589, 615, 1057, 1369
MunI CAATTG 1 cut(s) 1157
Mva1269I GAATGC 5 cut(s) 291, 902, 1310, 1979, 2185
MvaI CCWGG 4 cut(s) 236, 589, 615, 1369
MvnI CGCG 1 cut(s) 1281
NarI GGCGCC 1 cut(s) 116
NciI CCSGG 1 cut(s) 1057
NcoI CCATGG 1 cut(s) 1182
NheI GCTAGC 1 cut(s) 1952
NlaIV GGNNCC 6 cut(s) 117, 233, 609, 1428, 1871, 1880
NmuCI GTSAC 6 cut(s) 253, 271, 688, 946, 1360, 1531
NsiI ATGCAT 2 cut(s) 904, 1310
NspI RCATGY 2 cut(s) 738, 1578
NspV TTCGAA 2 cut(s) 1302, 1459
OliI CACNNNNGTG 1 cut(s) 14
PacI TTAATTAA 1 cut(s) 519
PaeR7I CTCGAG 1 cut(s) 1292
PagI TCATGA 2 cut(s) 906, 2190
PceI AGGCCT 1 cut(s) 1445
PciI ACATGT 1 cut(s) 734
PcsI WCGNNNNNNNCGW 2 cut(s) 1299, 1643
PctI GAATGC 5 cut(s) 291, 902, 1310, 1979, 2185
PdmI GAANNNNTTC 2 cut(s) 2198, 2573
PfeI GAWTC 7 cut(s) 573, 876, 1314, 1898, 2019, 2286, 2498
PflMI CCANNNNNTGG 1 cut(s) 841
PfoI TCCNGGA 3 cut(s) 234, 587, 1367
Ple19I CGATCG 3 cut(s) 183, 2187, 2624
PleI GAGTC 1 cut(s) 2596
PluTI GGCGCC 1 cut(s) 119
PpsI GAGTC 1 cut(s) 2596
PpuMI RGGWCCY 3 cut(s) 232, 608, 1870
PscI ACATGT 1 cut(s) 734
PshBI ATTAAT 1 cut(s) 515
Psp124BI GAGCTC 2 cut(s) 1227, 1516
Psp5II RGGWCCY 3 cut(s) 232, 608, 1870
Psp6I CCWGG 4 cut(s) 234, 587, 613, 1367
PspFI CCCAGC 2 cut(s) 81, 280
PspGI CCWGG 4 cut(s) 234, 587, 613, 1367
PspN4I GGNNCC 6 cut(s) 117, 233, 609, 1428, 1871, 1880
PspPI GGNCC 6 cut(s) 31, 232, 608, 1073, 1375, 1870
PspPPI RGGWCCY 3 cut(s) 232, 608, 1870
PspXI VCTCGAGB 1 cut(s) 1292
PstI CTGCAG 1 cut(s) 1203
PsuI RGATCY 2 cut(s) 546, 1878
PvuI CGATCG 3 cut(s) 183, 2187, 2624
RsaI GTAC 2 cut(s) 1268, 1622
RsaNI GTAC 2 cut(s) 1267, 1621
RseI CAYNNNNRTG 1 cut(s) 14
SacI GAGCTC 2 cut(s) 1227, 1516
SalI GTCGAC 1 cut(s) 37
Sau96I GGNCC 6 cut(s) 31, 232, 608, 1073, 1375, 1870
SchI GAGTC 1 cut(s) 2596
ScrFI CCNGG 5 cut(s) 236, 589, 615, 1057, 1369
SduI GDGCHC 5 cut(s) 1227, 1325, 1516, 1735, 2329
SfaNI GCATC 3 cut(s) 210, 889, 2389
SfcI CTRYAG 3 cut(s) 429, 1199, 2253
SfoI GGCGCC 1 cut(s) 117
Sfr274I CTCGAG 1 cut(s) 1292
SfuI TTCGAA 2 cut(s) 1302, 1459
SinI GGWCC 5 cut(s) 232, 608, 1073, 1375, 1870
SlaI CTCGAG 1 cut(s) 1292
SmiMI CAYNNNNRTG 1 cut(s) 14
SmlI CTYRAG 6 cut(s) 352, 853, 962, 1292, 2126, 2273
SmoI CTYRAG 6 cut(s) 352, 853, 962, 1292, 2126, 2273
SpeI ACTAGT 1 cut(s) 938
SseBI AGGCCT 1 cut(s) 1445
SsiI CCGC 8 cut(s) 5, 119, 145, 169, 176, 187, 229, 1883
SspDI GGCGCC 1 cut(s) 115
SspMI CTAG 5 cut(s) 641, 726, 939, 1953, 2615
SstI GAGCTC 2 cut(s) 1227, 1516
StuI AGGCCT 1 cut(s) 1445
StyD4I CCNGG 5 cut(s) 234, 587, 613, 1055, 1367
StyI CCWWGG 3 cut(s) 1182, 1270, 2132
TaiI ACGT 4 cut(s) 200, 273, 794, 811
TatI WGTACW 1 cut(s) 1620
TauI GCSGC 5 cut(s) 8, 121, 148, 179, 190
TfiI GAWTC 7 cut(s) 573, 876, 1314, 1898, 2019, 2286, 2498
TscAI CASTG 5 cut(s) 574, 770, 786, 1740, 2475
TseFI GTSAC 6 cut(s) 253, 271, 688, 946, 1360, 1531
Tsp45I GTSAC 6 cut(s) 253, 271, 688, 946, 1360, 1531
TspRI CASTG 5 cut(s) 574, 770, 786, 1740, 2475
Van91I CCANNNNNTGG 1 cut(s) 841
VpaK11BI GGWCC 5 cut(s) 232, 608, 1073, 1375, 1870
VspI ATTAAT 1 cut(s) 515
XapI RAATTY 3 cut(s) 393, 1721, 2198
XbaI TCTAGA 1 cut(s) 2614
XceI RCATGY 2 cut(s) 738, 1578
XhoI CTCGAG 1 cut(s) 1292
XmiI GTMKAC 2 cut(s) 38, 316
XmnI GAANNNNTTC 2 cut(s) 2198, 2573
XspI CTAG 5 cut(s) 641, 726, 939, 1953, 2615
Zsp2I ATGCAT 2 cut(s) 904, 1310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.