FvH4_3g29740

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
22806749 .. 22814326
7578 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29740.t5

Sequence Viewer

Length: 4332 bp
ATGGCGGCGGCATTGGCCGGAGAAGACTTAATGAGGCAGTCGAGCAGCCGGGGGAGCTGGCGGTCGACGAGTGTCCGGGAAATGTGGAACGCGCCGGACGTGTTCCAGCGGAGCGGGCGGCAGGACACGCTGGATGAGGAGGAGGAGCTCAAGTGGGCTGCCATAGAGCGGTTGCCGACTTATGATAGGTTGAGGAAAGGGATGTTGAGGAATGTTATGAGCAATGGAAGGGTTGTTGCTGAGGAAGTTGATGTTGCCAATCTTGGGGATTCTGATAAGAAGCAGTTGATGGAGAGCATACTCAAGGTTATTGAGGAGGACAATGAGAAGTTCTTGAAGAAGCTCAAAGCCAGAAATGACAGGGTTGGTATTGATGTACCTAAAGTTGAGGTTAGATTCCAGAATTTAGCAATAGAGGGAGATGCGTTTGTAGGCACCAGAGCACTTCCGACTCTGTGGAATTCCACCTTGAACGCAGTAGAGGGAATACTGGGACTCGTTGGACTTTCACCATCGAAGAAGAGAATTGTTAAGATTCTACAAGATGTTAGTGGTATTGTCAAACCAGCAAGGATGACACTTCTCCTTGGTCCTCCAGGATCAGGAAAAACAACATTGCTAAAAGCACTTTCTGGCAAACTAGATAGGGATCTTAAGGTTGATGGGAAGGTCACTTACTGCGGCCATGAATTTAATGAATTTGTGCCTCAGAGAACCTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACATTTGATTTCTCTGGACGTTGCTTAGGAGTTGGAACAAGGTACGATATACTAGCAGAGTTGTCTAGACGGGAGAAAGATGCAGGTATCAAACCAGATCCTGCCATTGATGCATACATGAAAGCCACATCTGTGGCTGGCCAGGAAACAAGTTTGATCACAGATTATGTTCTCAAGATACTTGGATTAGATATCTGTGCTGATATTATGGTGGGTGATGACATGAGAAGGGGAATATCTGGTGGACAAAAGAAGCGTGTCACTACTGGAGAAATGTTGGTTGGACCAGCAAAAGCATTTTTCATGGATGAAATATCAACAGGGCTGGACAGTTCCACAACCTTTCAGATTGTCAAATACATGAGACAAATGGTTCACATTATGGATGTGTCAATGGTCATCTCTCTCTTGCAACCTGCACCTGAGACGTACGATCTTTTTGATGATGTTATCCTTCTCTCGGAGGGTCGGATTGTTTATCAAGGCCCACGAGAGAATGTCCTCGAGTTTTTCGAATATATGGGATTCAAATGCCCGGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTGACCTCAAAAAAGGACCAAGAACAATACTGGTTTAAGAAGAACCAACCTTACAGGTTAGTCACAGTAGATGATTTTGTTCAGGCGTTCAGCTCCTTCCATGTTGGCCAACGGCTTGGGGAAGAACTAAGAGTTCCTTATGACAAGAGACATGCCCATCCTGCTGCTTTGGTTAAGGAAAAGTATGGAATTTCCAATATGGAGCTCTTCAAGGCATGCTTTGCAAGGGAATGGCTCTTAATGAAGCGGAACTCTTTTGTGTACATCTTCAAAACTACACAGATTGCCATCATGGCTACAATTGCTTTGACTGTGTTCTTAAGAACAGAAATGAAATCTGGGACAGAAGCTGATTCAGCAAAATATTGGGGGGCACTGTTTTTCAGTCTCATTAACGTCATGTTTAATGGAATGGCAGAGCTTGCAATGACAGTTTTCCGGCTTCCTGTGTTCTTTAAACAAAGGGATGCCTTGTTCTATCCAGCGTGGGCTTTTGCATTGCCCATTTGGGTGACCCGAATTCCTGTTTCAGTGCTGGAATCTGCAATATGGATCATCTTTACCTATTACACCATAGGATTTGCACCTGATCCTAGTAGGTTCTTCAAACAGTTATTGGCTTTCATTGGTATAAGTCAGATGGCACTCTCCCTCTTCCGTTTCATTGCAGCTCTTGGAAGATCACCTGTGGTTGCTAACACAATCGGTTCATTTACACTGCTATTGGTATTTGTCCTTGGAGGTTATGTTGTTGCTAAAGATGACATCCAGTCGTGGATGATATGGGGCTACTATGTCTCACCTATGATGTACGGACAGAATGCAATTGCTATTAATGAATTTCTTGATGATAGATGGGGCGGCCCACCAATCAACTCCACTCAGCCCACTGTGGGGAAAGCCCTTCTCAGCCAAAGAGGCCTGTACACTACAGAATCTTGGTATTGGATCTGTGTTGCAGCTCTCTTCGGGTTTTCTCTTATCTTCAATCTGATGTTCATTGCAGCACTGACCTACTTGAACCCTCTTGGTGACAACAAAACTTTGATTGGAGAGGATGACTCTGAAACCAAGAGGAGGCCACAATTGACAGAAGGTATTGATATGCAAGTGAGAAATGCCGAAGGAAGTTCAAATGGACAAGCCAATAGAGGAATGGTGTTGCCCTTCCAGCCCCTTTCGCTCGCTTTCAGCCATGTGAACTACTATGTGGATATGCCTGCGGAGATGAAGACCCAAGGTGTCGAAGAGGACCGACTGCAACTACTAAGAGATGTTAATGGTGCATTCAGGCCAGGGATTCTCACTGCATTAGTTGGTGTTAGTGGTGCTGGAAAAACTACTTTGATGGATGTTCTAGCTGGAAGAAAGACTGGTGGGTCTATAGAAGGTAGTATTAGCATCTCTGGATACCCAAAAAACCAGACCACATTTGCTCGGGTTAGCGGTTATTGTGAACAGAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTGCTATACTCTGCCTGGCTACGTCTGTCTAAGGATGTGGACAAAAGCAAACGAAAGATGTTTGTTGATGAAGTTATGGACTTGGTGGAGCTTCACCCCTTGAGGAATGCTTTAGTTGGACTTCCTGGAGTTGATGGGCTTTCAACTGAACAAAGAAAGAGGCTAACCATTGCTGTAGAATTGGTTGCTAATCCTTCCATTATCTTTATGGATGAGCCGACATCAGGGCTTGATGCTAGAGCAGCTGCAATTGTTATGCGTACTGTAAGAAACACAGTCGATACAGGACGAACTGTTGTCTGCACCATTCACCAACCTAGCATTGACATTTTTGAAGCTTTTGACGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGATTTATGCTGGACCACTTGGTGACCGGTCTCACAAGCTTGTTGAATATTTTGAGGCCATTCCTGGAGTTCCAAAGATCAAAGACGGCTACAATCCTGCTACATGGATGTTGGAGGTCAGCTCTGCTGCAGTTGAGGCTCAAAATAACATTGATTTTGCTGAAGTATATGCGAACTCTGAGCTGTATAGGAGCGTTCAAGACCAGATCAAGGAATTGAGCACACCAGTCCCAGGCTCCAAGGACCTTTACTTCCCCACCCAATTCTCGCAGAGCTTCCCAACTCAGTGCAAGGCTTGCTTTTGGAAACAGCACTGGTCCTACTGGAGAAACTCACACTACAATGCTATTAGATTTTTACAAACAATAGTCATCGGTGCACTTTTTGGTGTCATCTTCTGGAACAAAGGAGACGTGCTAGATAAACAACAAGATATTGTTAACCTGTTGGGAGCAACCTATTCTGCTGTTCTCTTCCTTGGAGCGGGCAACGCTTCTTCTGTGCAATCTGTAGTTTCTATCGAGAGAACAGTTTTCTACCGAGAAAGAGCAGCAGGAATGTATTCCGAGTTGCCTTATGCATTTGCTCAGGTGGCCATTGAGACGGTTTATGTTGCCATACAAACCTTCATTTATTCCCTTCTTCTGTTCACTATGATCGGCTACGAATTCAAAATTGAGAAGTTCTTGTACTTCTACTACTTCATATTCATGTGTTTTACATACTTCTCTATGTATGGAATGATGGTGGTTGCCCTAACTCCTGGTCATCAAATCGCTGCAATTGTCATGTCCTTCTTCATGAGTTTCTGGAATCTGTTCTCTGGTTTCCTCATTGCTAGACCGCTAATCCCGATATGGTGGAGGTGGTACTACTGGGGTTCTCCAGTTGCTTGGACAATCTACGGTGTCATTGCATCTCAATTTGGTGATCGGAGCGATAAGAGTATCTTAACTGCTGAAGGACCTGTAAAAGTGGATGAATTCCTTAAGGCGACTTGGGGCTATGACCACGACTTCCTCATACCAGTTGTTGTTGCTCATGTTGGTTGGGTCCTCCTCTTCTTCTTCGTCTTTGCTTATGGTATCAAGTACCTTAACTTCCAGAGGAGATGA

Protein Analysis

1444

Amino Acids

162.8

Weight (kDa)

6.56

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 2 - 170 1.3e-12 ABC transporter
ABC2_membrane_7 PF19055 204 - 255 6.3e-06 ABC-2 type transporter
ABC2_membrane PF01061 325 - 537 2.8e-47 ABC-2 type transporter
PDR_assoc PF08370 548 - 606 9.6e-24 Plant PDR ABC transporter associated
ABC_tran PF00005 679 - 831 8.3e-20 ABC transporter
ABC2_membrane PF01061 976 - 1190 3.2e-54 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2719
Acc36I ACCTGC 2 cut(s) 845, 1195
AccB1I GGYRCC 1 cut(s) 434
AccBSI CCGCTC 3 cut(s) 114, 169, 3701
AccI GTMKAC 1 cut(s) 65
AccII CGCG 1 cut(s) 92
AclWI GGATC 6 cut(s) 607, 657, 863, 1901, 1925, 2297
AcoI YGGCCR 5 cut(s) 15, 682, 910, 1447, 3810
AcsI RAATTY 9 cut(s) 403, 460, 689, 698, 1530, 1860, 2180, 3884, 4199
AcuI CTGAAG 2 cut(s) 3399, 4197
AdeI CACNNNGTG 1 cut(s) 3239
AflII CTTAAG 3 cut(s) 653, 1660, 4205
AflIII ACRYGT 1 cut(s) 99
AgeI ACCGGT 1 cut(s) 3243
AhdI GACNNNNNGTC 1 cut(s) 2110
AjiI CACGTC 2 cut(s) 100, 3631
AjnI CCWGG 8 cut(s) 595, 912, 2635, 2855, 2965, 3280, 3448, 3979
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AleI CACNNNNGTG 1 cut(s) 902
AloI GAACNNNNNNTCC 2 cut(s) 1799, 1831
Alw21I GWGCWC 5 cut(s) 150, 445, 1548, 3440, 3598
Alw26I GTCTC 8 cut(s) 1129, 1190, 1483, 1733, 2143, 3252, 3621, 3812
Alw44I GTGCAC 1 cut(s) 3594
AlwI GGATC 6 cut(s) 607, 657, 863, 1901, 1925, 2297
AlwNI CAGNNNCTG 2 cut(s) 872, 1691
Ama87I CYCGRG 2 cut(s) 1274, 2778
ApaLI GTGCAC 1 cut(s) 3594
ApoI RAATTY 9 cut(s) 403, 460, 689, 698, 1530, 1860, 2180, 3884, 4199
AseI ATTAAT 1 cut(s) 2175
AsiGI ACCGGT 1 cut(s) 3243
Asp700I GAANNNNTTC 2 cut(s) 3778, 4034
AspLEI GCGC 1 cut(s) 94
AsuC2I CCSGG 3 cut(s) 50, 77, 1307
AsuII TTCGAA 1 cut(s) 1284
AvaI CYCGRG 2 cut(s) 1274, 2778
AvaII GGWCC 9 cut(s) 590, 1055, 1357, 2593, 3230, 3460, 3534, 4181, 4270
BaeGI GKGCMC 2 cut(s) 1717, 3598
BalI TGGCCA 3 cut(s) 912, 1449, 3812
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 2 cut(s) 150, 1548
BarI GAAGNNNNNNTAC 5 cut(s) 659, 691, 3890, 3922, 4301
BauI CACGAG 1 cut(s) 1260
BbsI GAAGAC 2 cut(s) 30, 2579
Bbv12I GWGCWC 5 cut(s) 150, 445, 1548, 3440, 3598
BbvCI CCTCAGC 1 cut(s) 240
BceAI ACGGC 2 cut(s) 1469, 3319
BciT130I CCWGG 8 cut(s) 597, 914, 2637, 2857, 2967, 3282, 3450, 3981
BciVI GTATCC 1 cut(s) 2744
BclI TGATCA 1 cut(s) 927
BcnI CCSGG 3 cut(s) 50, 77, 1307
BcoDI GTCTC 8 cut(s) 1129, 1190, 1483, 1733, 2143, 3252, 3621, 3812
BfaI CTAG 9 cut(s) 641, 824, 837, 1935, 2699, 3078, 3159, 3635, 4056
BfmI CTRYAG 5 cut(s) 2271, 2724, 3015, 3345, 3726
BfrI CTTAAG 3 cut(s) 653, 1660, 4205
BfuAI ACCTGC 2 cut(s) 845, 1195
BfuI GTATCC 1 cut(s) 2744
BglI GCCNNNNNGGC 2 cut(s) 1634, 2259
Bme18I GGWCC 9 cut(s) 590, 1055, 1357, 2593, 3230, 3460, 3534, 4181, 4270
BmeRI GACNNNNNGTC 1 cut(s) 2110
BmeT110I CYCGRG 2 cut(s) 1274, 2778
BmgBI CACGTC 2 cut(s) 100, 3631
BmiI GGNNCC 3 cut(s) 436, 3454, 4271
BmrI ACTGGG 2 cut(s) 500, 4102
BmsI GCATC 7 cut(s) 412, 841, 871, 1798, 2751, 3064, 4142
BmuI ACTGGG 2 cut(s) 500, 4102
BoxI GACNNNNGTC 1 cut(s) 71
BpiI GAAGAC 2 cut(s) 30, 2579
BplI GAGNNNNNCTC 4 cut(s) 2387, 2419, 3323, 3355
BpmI CTGGAG 6 cut(s) 579, 1059, 2988, 3303, 3562, 4086
Bpu10I CCTNAGC 3 cut(s) 240, 796, 3804
Bpu14I TTCGAA 1 cut(s) 1284
BpuEI CTTGAG 4 cut(s) 134, 287, 929, 2962
BpuMI CCSGG 3 cut(s) 50, 77, 1307
BsaBI GATNNNNATC 2 cut(s) 648, 1628
BsaI GGTCTC 1 cut(s) 3252
BsaJI CCNNGG 8 cut(s) 49, 586, 2077, 2578, 2636, 3448, 3456, 3694
BsaWI WCCGGW 1 cut(s) 3243
BsaXI ACNNNNNCTCC 6 cut(s) 137, 167, 2073, 2103, 3201, 3231
Bse118I RCCGGY 1 cut(s) 3243
Bse3DI GCAATG 9 cut(s) 229, 614, 1773, 1838, 2004, 2340, 3009, 4050, 4128
Bse8I GATNNNNATC 2 cut(s) 648, 1628
BseBI CCWGG 8 cut(s) 597, 914, 2637, 2857, 2967, 3282, 3450, 3981
BseDI CCNNGG 8 cut(s) 49, 586, 2077, 2578, 2636, 3448, 3456, 3694
BseJI GATNNNNATC 2 cut(s) 648, 1628
BseMI GCAATG 9 cut(s) 229, 614, 1773, 1838, 2004, 2340, 3009, 4050, 4128
BseMII CTCAG 8 cut(s) 231, 722, 1185, 2237, 2263, 3387, 3515, 3818
BseRI GAGGAG 7 cut(s) 152, 155, 158, 329, 2431, 3222, 4265
BseSI GKGCMC 2 cut(s) 1717, 3598
BsgI GTGCAG 2 cut(s) 1173, 3127
Bsh1236I CGCG 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 65
BshNI GGYRCC 1 cut(s) 434
BshTI ACCGGT 1 cut(s) 3243
BsiEI CGRYCG 1 cut(s) 65
BsiHKAI GWGCWC 5 cut(s) 150, 445, 1548, 3440, 3598
BsiHKCI CYCGRG 2 cut(s) 1274, 2778
BsiSI CCGG 7 cut(s) 18, 49, 76, 95, 1307, 1780, 3244
BsiWI CGTACG 1 cut(s) 1200
BslFI GGGAC 3 cut(s) 507, 1696, 3431
BsmAI GTCTC 8 cut(s) 1129, 1190, 1483, 1733, 2143, 3252, 3621, 3812
BsmBI CGTCTC 3 cut(s) 1190, 3621, 3812
BsmFI GGGAC 3 cut(s) 507, 1696, 3431
BsmI GAATGC 3 cut(s) 2167, 2627, 2953
Bso31I GGTCTC 1 cut(s) 3252
BsoBI CYCGRG 2 cut(s) 1274, 2778
Bsp119I TTCGAA 1 cut(s) 1284
Bsp1286I GDGCHC 6 cut(s) 150, 445, 1548, 1717, 3440, 3598
Bsp1407I TGTACA 2 cut(s) 1602, 2265
BspCNI CTCAG 8 cut(s) 232, 721, 1186, 2236, 2262, 3388, 3514, 3817
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 4017
BspLI GGNNCC 3 cut(s) 436, 3454, 4271
BspMAI CTGCAG 1 cut(s) 3349
BspMI ACCTGC 2 cut(s) 845, 1195
BspPI GGATC 6 cut(s) 607, 657, 863, 1901, 1925, 2297
BspQI GCTCTTC 1 cut(s) 1553
BspT104I TTCGAA 1 cut(s) 1284
BspT107I GGYRCC 1 cut(s) 434
BspTI CTTAAG 3 cut(s) 653, 1660, 4205
BspTNI GGTCTC 1 cut(s) 3252
BsrBI CCGCTC 3 cut(s) 114, 169, 3701
BsrDI GCAATG 9 cut(s) 229, 614, 1773, 1838, 2004, 2340, 3009, 4050, 4128
BsrFI RCCGGY 1 cut(s) 3243
BsrGI TGTACA 2 cut(s) 1602, 2265
BssAI RCCGGY 1 cut(s) 3243
BssECI CCNNGG 8 cut(s) 49, 586, 2077, 2578, 2636, 3448, 3456, 3694
BssSI CACGAG 1 cut(s) 1260
BssT1I CCWWGG 5 cut(s) 586, 2077, 2578, 3456, 3694
Bst2BI CACGAG 1 cut(s) 1260
Bst2UI CCWGG 8 cut(s) 597, 914, 2637, 2857, 2967, 3282, 3450, 3981
Bst6I CTCTTC 7 cut(s) 515, 1553, 2000, 2312, 2583, 3695, 4283
BstAFI CTTAAG 3 cut(s) 653, 1660, 4205
BstAPI GCANNNNNTGC 3 cut(s) 1562, 1763, 3513
BstAUI TGTACA 2 cut(s) 1602, 2265
BstBI TTCGAA 1 cut(s) 1284
BstEII GGTNACC 2 cut(s) 1852, 3239
BstFNI CGCG 1 cut(s) 92
BstHHI GCGC 1 cut(s) 94
BstMAI GTCTC 8 cut(s) 1129, 1190, 1483, 1733, 2143, 3252, 3621, 3812
BstMCI CGRYCG 1 cut(s) 65
BstNI CCWGG 8 cut(s) 597, 914, 2637, 2857, 2967, 3282, 3450, 3981
BstNSI RCATGY 2 cut(s) 1496, 1560
BstPAI GACNNNNGTC 1 cut(s) 71
BstPI GGTNACC 2 cut(s) 1852, 3239
BstSFI CTRYAG 5 cut(s) 2271, 2724, 3015, 3345, 3726
BstSLI GKGCMC 2 cut(s) 1717, 3598
BstUI CGCG 1 cut(s) 92
BstV2I GAAGAC 2 cut(s) 30, 2579
BstX2I RGATCY 3 cut(s) 649, 868, 2289
BstXI CCANNNNNNTGG 3 cut(s) 904, 1457, 4110
BstYI RGATCY 3 cut(s) 649, 868, 2289
BsuI GTATCC 1 cut(s) 2744
BtrI CACGTC 2 cut(s) 100, 3631
BtsI GCAGTG 2 cut(s) 2057, 2646
BtsIMutI CAGTG 8 cut(s) 1715, 1878, 2057, 2229, 2348, 2646, 3509, 3529
BveI ACCTGC 2 cut(s) 845, 1195
CaiI CAGNNNCTG 2 cut(s) 872, 1691
CciI TCATGA 1 cut(s) 4017
CfoI GCGC 1 cut(s) 94
Cfr10I RCCGGY 1 cut(s) 3243
CspAI ACCGGT 1 cut(s) 3243
DraI TTTAAA 1 cut(s) 1798
DraIII CACNNNGTG 1 cut(s) 3239
DrdI GACNNNNNNGTC 1 cut(s) 2719
DriI GACNNNNNGTC 1 cut(s) 2110
DseDI GACNNNNNNGTC 1 cut(s) 2719
EaeI YGGCCR 5 cut(s) 15, 682, 910, 1447, 3810
Eam1104I CTCTTC 7 cut(s) 515, 1553, 2000, 2312, 2583, 3695, 4283
Eam1105I GACNNNNNGTC 1 cut(s) 2110
EarI CTCTTC 7 cut(s) 515, 1553, 2000, 2312, 2583, 3695, 4283
Ecl136II GAGCTC 2 cut(s) 148, 1546
Eco130I CCWWGG 5 cut(s) 586, 2077, 2578, 3456, 3694
Eco147I AGGCCT 1 cut(s) 2262
Eco24I GRGCYC 2 cut(s) 150, 1548
Eco31I GGTCTC 1 cut(s) 3252
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 9 cut(s) 590, 1055, 1357, 2593, 3230, 3460, 3534, 4181, 4270
Eco53kI GAGCTC 2 cut(s) 148, 1546
Eco57I CTGAAG 2 cut(s) 3399, 4197
Eco88I CYCGRG 2 cut(s) 1274, 2778
Eco91I GGTNACC 2 cut(s) 1852, 3239
EcoICRI GAGCTC 2 cut(s) 148, 1546
EcoO109I RGGNCCY 3 cut(s) 3460, 4181, 4270
EcoO65I GGTNACC 2 cut(s) 1852, 3239
EcoRI GAATTC 4 cut(s) 460, 1860, 3884, 4199
EcoRII CCWGG 8 cut(s) 595, 912, 2635, 2855, 2965, 3280, 3448, 3979
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 5 cut(s) 586, 2077, 2578, 3456, 3694
EcoT22I ATGCAT 2 cut(s) 886, 3799
EcoT38I GRGCYC 2 cut(s) 150, 1548
ErhI CCWWGG 5 cut(s) 586, 2077, 2578, 3456, 3694
Esp3I CGTCTC 3 cut(s) 1190, 3621, 3812
FalI AAGNNNNNCTT 8 cut(s) 1462, 1494, 1544, 1576, 3500, 3532, 4151, 4183
FaqI GGGAC 3 cut(s) 507, 1696, 3431
FauI CCCGC 2 cut(s) 107, 3694
FauNDI CATATG 1 cut(s) 2821
FbaI TGATCA 1 cut(s) 927
FblI GTMKAC 1 cut(s) 65
FriOI GRGCYC 2 cut(s) 150, 1548
FspBI CTAG 9 cut(s) 641, 824, 837, 1935, 2699, 3078, 3159, 3635, 4056
GlaI GCGC 1 cut(s) 93
GsuI CTGGAG 6 cut(s) 579, 1059, 2988, 3303, 3562, 4086
HapII CCGG 7 cut(s) 18, 49, 76, 95, 1307, 1780, 3244
HhaI GCGC 1 cut(s) 94
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HincII GTYRAC 2 cut(s) 66, 3658
HindII GTYRAC 2 cut(s) 66, 3658
HindIII AAGCTT 2 cut(s) 3177, 3254
HpaI GTTAAC 1 cut(s) 3658
HpaII CCGG 7 cut(s) 18, 49, 76, 95, 1307, 1780, 3244
Hpy99I CGWCG 1 cut(s) 70
HpyCH4IV ACGT 6 cut(s) 99, 790, 1199, 1737, 2863, 3630
HpySE526I ACGT 6 cut(s) 99, 790, 1199, 1737, 2863, 3630
HspAI GCGC 1 cut(s) 92
Ksp22I TGATCA 1 cut(s) 927
KspAI GTTAAC 1 cut(s) 3658
LguI GCTCTTC 1 cut(s) 1553
LweI GCATC 7 cut(s) 412, 841, 871, 1798, 2751, 3064, 4142
MaeI CTAG 9 cut(s) 641, 824, 837, 1935, 2699, 3078, 3159, 3635, 4056
MaeII ACGT 6 cut(s) 99, 790, 1199, 1737, 2863, 3630
MaeIII GTNAC 8 cut(s) 670, 1030, 1342, 1402, 1852, 2372, 2824, 3239
MbiI CCGCTC 3 cut(s) 114, 169, 3701
MfeI CAATTG 5 cut(s) 1641, 2166, 2426, 3090, 3999
MflI RGATCY 3 cut(s) 649, 868, 2289
MhlI GDGCHC 6 cut(s) 150, 445, 1548, 1717, 3440, 3598
MlsI TGGCCA 3 cut(s) 912, 1449, 3812
MluNI TGGCCA 3 cut(s) 912, 1449, 3812
MlyI GAGTC 3 cut(s) 445, 489, 2396
MmeI TCCRAC 7 cut(s) 473, 481, 784, 1033, 1220, 2938, 3309
Mox20I TGGCCA 3 cut(s) 912, 1449, 3812
Mph1103I ATGCAT 2 cut(s) 886, 3799
MroXI GAANNNNTTC 2 cut(s) 3778, 4034
MscI TGGCCA 3 cut(s) 912, 1449, 3812
MslI CAYNNNNRTG 5 cut(s) 750, 902, 1850, 3558, 3926
Msp20I TGGCCA 3 cut(s) 912, 1449, 3812
MspA1I CMGCKG 2 cut(s) 109, 3086
MspCI CTTAAG 3 cut(s) 653, 1660, 4205
MspI CCGG 7 cut(s) 18, 49, 76, 95, 1307, 1780, 3244
MunI CAATTG 5 cut(s) 1641, 2166, 2426, 3090, 3999
Mva1269I GAATGC 3 cut(s) 2167, 2627, 2953
MvaI CCWGG 8 cut(s) 597, 914, 2637, 2857, 2967, 3282, 3450, 3981
MvnI CGCG 1 cut(s) 92
NciI CCSGG 3 cut(s) 50, 77, 1307
NdeI CATATG 1 cut(s) 2821
NlaIV GGNNCC 3 cut(s) 436, 3454, 4271
NmuCI GTSAC 7 cut(s) 670, 1030, 1342, 1402, 1852, 2372, 3239
NsiI ATGCAT 2 cut(s) 886, 3799
NspI RCATGY 2 cut(s) 1496, 1560
NspV TTCGAA 1 cut(s) 1284
OliI CACNNNNGTG 1 cut(s) 902
PaeI GCATGC 1 cut(s) 1560
PaeR7I CTCGAG 1 cut(s) 1274
PagI TCATGA 1 cut(s) 4017
PceI AGGCCT 1 cut(s) 2262
PciSI GCTCTTC 1 cut(s) 1553
PcsI WCGNNNNNNNCGW 2 cut(s) 96, 1281
PctI GAATGC 3 cut(s) 2167, 2627, 2953
PdmI GAANNNNTTC 2 cut(s) 3778, 4034
Pfl23II CGTACG 1 cut(s) 1200
PfoI TCCNGGA 4 cut(s) 75, 595, 2965, 3280
PinAI ACCGGT 1 cut(s) 3243
PleI GAGTC 3 cut(s) 445, 489, 2396
PpsI GAGTC 3 cut(s) 445, 489, 2396
PpuMI RGGWCCY 3 cut(s) 3460, 4181, 4270
PshAI GACNNNNGTC 1 cut(s) 71
PshBI ATTAAT 1 cut(s) 2175
Psp124BI GAGCTC 2 cut(s) 150, 1548
Psp5II RGGWCCY 3 cut(s) 3460, 4181, 4270
Psp6I CCWGG 8 cut(s) 595, 912, 2635, 2855, 2965, 3280, 3448, 3979
PspEI GGTNACC 2 cut(s) 1852, 3239
PspGI CCWGG 8 cut(s) 595, 912, 2635, 2855, 2965, 3280, 3448, 3979
PspLI CGTACG 1 cut(s) 1200
PspN4I GGNNCC 3 cut(s) 436, 3454, 4271
PspPPI RGGWCCY 3 cut(s) 3460, 4181, 4270
PspXI VCTCGAGB 1 cut(s) 1274
PsrI GAACNNNNNNTAC 2 cut(s) 1376, 1408
PstI CTGCAG 1 cut(s) 3349
PstNI CAGNNNCTG 2 cut(s) 872, 1691
PsuI RGATCY 3 cut(s) 649, 868, 2289
PvuII CAGCTG 1 cut(s) 3086
RseI CAYNNNNRTG 5 cut(s) 750, 902, 1850, 3558, 3926
SacI GAGCTC 2 cut(s) 150, 1548
SalI GTCGAC 1 cut(s) 64
SapI GCTCTTC 1 cut(s) 1553
SchI GAGTC 3 cut(s) 445, 489, 2396
SduI GDGCHC 6 cut(s) 150, 445, 1548, 1717, 3440, 3598
SfaNI GCATC 7 cut(s) 412, 841, 871, 1798, 2751, 3064, 4142
SfcI CTRYAG 5 cut(s) 2271, 2724, 3015, 3345, 3726
Sfr274I CTCGAG 1 cut(s) 1274
SfuI TTCGAA 1 cut(s) 1284
SinI GGWCC 9 cut(s) 590, 1055, 1357, 2593, 3230, 3460, 3534, 4181, 4270
SlaI CTCGAG 1 cut(s) 1274
SmiMI CAYNNNNRTG 5 cut(s) 750, 902, 1850, 3558, 3926
SmlI CTYRAG 8 cut(s) 149, 302, 653, 944, 1274, 1660, 2941, 4205
SmoI CTYRAG 8 cut(s) 149, 302, 653, 944, 1274, 1660, 2941, 4205
SphI GCATGC 1 cut(s) 1560
SseBI AGGCCT 1 cut(s) 2262
SspI AATATT 2 cut(s) 1706, 3266
SspMI CTAG 9 cut(s) 641, 824, 837, 1935, 2699, 3078, 3159, 3635, 4056
SstI GAGCTC 2 cut(s) 150, 1548
StuI AGGCCT 1 cut(s) 2262
StyI CCWWGG 5 cut(s) 586, 2077, 2578, 3456, 3694
TaiI ACGT 6 cut(s) 102, 793, 1202, 1740, 2866, 3633
TaqI TCGA 8 cut(s) 41, 65, 515, 1275, 1284, 2586, 3120, 3738
TaqII GACCGA 1 cut(s) 2610
TatI WGTACW 3 cut(s) 1602, 2265, 3906
TauI GCSGC 5 cut(s) 8, 11, 121, 684, 2205
TscAI CASTG 8 cut(s) 1722, 1878, 2064, 2236, 2355, 2653, 3509, 3536
TseFI GTSAC 7 cut(s) 670, 1030, 1342, 1402, 1852, 2372, 3239
Tsp45I GTSAC 7 cut(s) 670, 1030, 1342, 1402, 1852, 2372, 3239
TspGWI ACGGA 2 cut(s) 1988, 2169
TspRI CASTG 8 cut(s) 1722, 1878, 2064, 2236, 2355, 2653, 3509, 3536
Vha464I CTTAAG 3 cut(s) 653, 1660, 4205
VneI GTGCAC 1 cut(s) 3594
VpaK11BI GGWCC 9 cut(s) 590, 1055, 1357, 2593, 3230, 3460, 3534, 4181, 4270
VspI ATTAAT 1 cut(s) 2175
XapI RAATTY 9 cut(s) 403, 460, 689, 698, 1530, 1860, 2180, 3884, 4199
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 2 cut(s) 1496, 1560
XcmI CCANNNNNNNNNTGG 2 cut(s) 2494, 3046
XhoI CTCGAG 1 cut(s) 1274
XmiI GTMKAC 1 cut(s) 65
XmnI GAANNNNTTC 2 cut(s) 3778, 4034
XspI CTAG 9 cut(s) 641, 824, 837, 1935, 2699, 3078, 3159, 3635, 4056
Zsp2I ATGCAT 2 cut(s) 886, 3799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.