pycom08g18050

Pleiotropic drug resistance protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0000245
Physical Location & Seq
Forward (+)
18256066 .. 18259730
3665 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g18050.2

Sequence Viewer

Length: 2109 bp
ATGTTGGTTGGACCAGCGAAAGCGTTCTTCATGGACGAAATTTCAACAGGGCTGGACAGTTCCACTACCTTTCAGATTGTCAAGTTCATGAGGCAAATGGTTCACATTCTCGATGTGACAATGGTCATCTCTCTTTTGCAGCCTGCACCAGAAACATATGATCTCTTTGATGACATTATCCTTATTTCTGAGGGTCAGATTGTGTACCAAGGCCCACGAGAGAATGTGCTTGAATTCTTCGAGCATATGGGGTTCAGATGCCCCGAGAGAAAAGGTGTTGCAGATTTCTTGCAAGAAGTGACCTCAAAGAAGGATCAAGAACAATACTGGTTTAAGAAGAGCGAACCATTCAGATATGTCTCTGTAGCTGAATTTGCACAAGCTTTCACCACCTTTCATTTTGGCCAACGTCTTGTTGAACACCTAAGAGTTCCGTATGACAAAACAACAGCCCATTCTGCTGCCTTGGTGAAGGAAAAGTATGGAATAAGCAGTATGGAGCTTTTCAAGGCATGCTTTGCAAGGGAATGGTTGCTGATGCAGCGTAACTCATTTGTGTACATATTCAAGATTGTGCAGATAGGAATCATGGCTACAATTACTTTCACTGTATTCTTCAGAACAGAAATGAAACCTGGGCAGTTAGGGGATTCGGCAAAATACATGGGAGCATTATTTTTCAGTCTCATTAACGTCATGTTTAATGGAGTGGCAGAGCTTTCAATGACAGTTTTCAGGCTTCCGGTGTTCTTTAAACAAAGGGATGCCTTATTCTTCCCTGGATGGGCTTTTGCCTTGCCCATTTGGCTAACCAGAATTCCCATTTCGTTTATGGAATCCTTCATATGGATCTGTTTGACATACTACACCATTGGATTTGCACCTGCGGCCAGTAGGTTCACAATATTCTCAATTTGGTGTGCAGATGACCTCGAGCCGTGGATGCTATGGAGCTACTATATTTCACCTATGATGTATGGACAAAATGCGATTGCCATCAATGAATTTCTTGACGAAAGATGGAGCACTCCTGTCCCCAACGCCGCTGAAAACACAGTTGGAAAGGTCCTTCTGAAGGGAAGAGGACTGTTTACCACAGAGACTTGGTTTTGGATTTGTATTGGCGCACTTTTCGGGTTTTCTATTCTTTTTAATCTTCTTTTCGTTGCAGCATTGACCTTCTTAGACCCAATTGTAGATAATAAAACCTTGATCGATAATGACGACGCTGAAAATAAGACCAAGCAACGATCCAATCCAGAAGGGATTGAAGAGACTCGACTCCAACTTCTACGAGATGTTAGTGGTGCATTTAGGCCTGGTGTTCTGACTGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACAACCTTGATGGATGTTTTAGCTGGAAGAAAGACTGGTGGGTACATTGAAGGAAGTATTACCATCTCTGGATACCCAAAGAACCAAGCCACATTTGCTCGGGTCAGCGGTTACTGTGAACAGAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTCGTATACTCTGCCTGGTTACGTCTTCCCAAGGATGTCACGAAGGATAAACGAAAGATGTTTGTTGATGAGGTCATAGATTTGGTCGAGCTTAATCCATTGAGGGATGCTTTAGTTGGACTTCCAGGAGTTAATGGACTTTCAACTGAGCAGAGAAAGAGGCTTACTATTGCCGTAGAATTGGTTGCTAATCCATCTATCATCTTCATGGATGAGCCGACATCAGGTCTTGATGCTAGAGCAGCCGCTATTGTTATGCGTACTGTAAGAAACACTGTGGATACAGGACGAACTGTTGTTTGCACTATTCACCAACCTAGCATTGACATTTTCGAGGCCTTTGATGAGCTGTTCCTAATGAAAAGAGGAGGACGTGTGATTTATGCTGGACCTCTAGGTGATCGGTCTCACAAGCTCGTTGATTATTTCGAGGCTCTTCCAGGGGTTCCGAAGATCAAAGAGGGTTACAATCCTGCTACCTGGATGTTAGATGTTAGCTCTGCTGCCGTTGAGGCTCAAAATGACGTAGACTTTGCAGAAATATTTGCAAACTCTGATCTCTATAGGAACTTATCAAGGAACTAA

Protein Analysis

703

Amino Acids

79.41

Weight (kDa)

5.47

Isoelectric Point (pI)

32.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 892
Acc36I ACCTGC 1 cut(s) 892
AccI GTMKAC 2 cut(s) 1530, 2052
AciI CCGC 4 cut(s) 887, 1044, 1470, 1770
AclWI GGATC 3 cut(s) 321, 857, 1245
AcoI YGGCCR 2 cut(s) 403, 888
AcsI RAATTY 5 cut(s) 39, 233, 371, 816, 1004
AcuI CTGAAG 2 cut(s) 601, 1094
AfaI GTAC 4 cut(s) 206, 560, 1406, 1786
AfiI CCNNNNNNNGG 4 cut(s) 784, 846, 1075, 1748
AflIII ACRYGT 1 cut(s) 1897
AgsI TTSAA 9 cut(s) 45, 233, 419, 508, 568, 723, 1271, 1412, 1668
AhdI GACNNNNNGTC 1 cut(s) 1749
AjiI CACGTC 1 cut(s) 1898
AjnI CCWGG 7 cut(s) 634, 778, 1318, 1538, 1648, 1963, 2003
AjuI GAANNNNNNNTTGG 2 cut(s) 1041, 1073
Alw21I GWGCWC 1 cut(s) 1028
Alw26I GTCTC 5 cut(s) 364, 689, 1094, 1268, 1935
AlwI GGATC 3 cut(s) 321, 857, 1245
Ama87I CYCGRG 3 cut(s) 263, 932, 1461
AoxI GGCC 5 cut(s) 211, 403, 888, 1316, 1860
ApeKI GCWGC 6 cut(s) 139, 461, 541, 1169, 1766, 2027
ApoI RAATTY 5 cut(s) 39, 233, 371, 816, 1004
ArsI GACNNNNNNTTYG 2 cut(s) 2039, 2071
Asp700I GAANNNNTTC 1 cut(s) 23
AspLEI GCGC 1 cut(s) 1127
AspS9I GGNCC 4 cut(s) 11, 212, 1066, 1913
AsuHPI GGTGA 6 cut(s) 379, 481, 957, 1491, 1826, 1934
AvaI CYCGRG 3 cut(s) 263, 932, 1461
AvaII GGWCC 3 cut(s) 11, 1066, 1913
BalI TGGCCA 1 cut(s) 405
BauI CACGAG 1 cut(s) 216
BbsI GAAGAC 1 cut(s) 1541
Bbv12I GWGCWC 1 cut(s) 1028
BbvI GCAGC 6 cut(s) 151, 448, 553, 1181, 1778, 2014
BccI CCATC 6 cut(s) 777, 1004, 1014, 1366, 1433, 1726
BceAI ACGGC 3 cut(s) 922, 1682, 2015
BciT130I CCWGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
BciVI GTATCC 2 cut(s) 1427, 1798
BcoDI GTCTC 5 cut(s) 364, 689, 1094, 1268, 1935
BfaI CTAG 3 cut(s) 1761, 1842, 1919
BfmI CTRYAG 2 cut(s) 363, 2086
BfuAI ACCTGC 1 cut(s) 892
BfuI GTATCC 2 cut(s) 1427, 1798
BglI GCCNNNNNGGC 2 cut(s) 805, 2036
BisI GCNGC 9 cut(s) 140, 462, 542, 888, 1044, 1170, 1767, 1770, 2028
BlsI GCNGC 9 cut(s) 141, 463, 543, 889, 1045, 1171, 1768, 1771, 2029
Bme1390I CCNGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
Bme18I GGWCC 3 cut(s) 11, 1066, 1913
BmeRI GACNNNNNGTC 1 cut(s) 1749
BmeT110I CYCGRG 3 cut(s) 263, 932, 1461
BmgBI CACGTC 1 cut(s) 1898
BmgT120I GGNCC 4 cut(s) 11, 212, 1066, 1913
BmiI GGNNCC 1 cut(s) 1971
BmrFI CCNGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
BmsI GCATC 6 cut(s) 248, 528, 754, 933, 1621, 1747
BoxI GACNNNNGTC 1 cut(s) 122
BpiI GAAGAC 1 cut(s) 1541
Bsa29I ATCGAT 1 cut(s) 1215
BsaBI GATNNNNATC 2 cut(s) 584, 995
BsaI GGTCTC 1 cut(s) 1935
BsaJI CCNNGG 7 cut(s) 208, 465, 635, 778, 938, 1554, 1964
BsaWI WCCGGW 1 cut(s) 742
BsaXI ACNNNNNCTCC 2 cut(s) 1884, 1914
Bsc4I CCNNNNNNNGG 4 cut(s) 784, 846, 1075, 1748
Bse1I ACTGG 3 cut(s) 332, 891, 1402
Bse8I GATNNNNATC 2 cut(s) 584, 995
BseBI CCWGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
BseCI ATCGAT 1 cut(s) 1215
BseDI CCNNGG 7 cut(s) 208, 465, 635, 778, 938, 1554, 1964
BseGI GGATG 8 cut(s) 769, 788, 948, 1381, 1564, 1636, 1741, 2013
BseJI GATNNNNATC 2 cut(s) 584, 995
BseLI CCNNNNNNNGG 4 cut(s) 784, 846, 1075, 1748
BseMII CTCAG 2 cut(s) 180, 1662
BseNI ACTGG 3 cut(s) 332, 891, 1402
BseRI GAGGAG 1 cut(s) 1905
BseXI GCAGC 6 cut(s) 151, 448, 553, 1181, 1778, 2014
BsgI GTGCAG 3 cut(s) 129, 596, 942
BshFI GGCC 5 cut(s) 213, 405, 890, 1318, 1862
BshVI ATCGAT 1 cut(s) 1215
BsiHKAI GWGCWC 1 cut(s) 1028
BsiHKCI CYCGRG 3 cut(s) 263, 932, 1461
BsiSI CCGG 1 cut(s) 743
BslFI GGGAC 1 cut(s) 1019
BslI CCNNNNNNNGG 4 cut(s) 784, 846, 1075, 1748
BsmAI GTCTC 5 cut(s) 364, 689, 1094, 1268, 1935
BsmFI GGGAC 1 cut(s) 1019
BsnI GGCC 5 cut(s) 213, 405, 890, 1318, 1862
Bso31I GGTCTC 1 cut(s) 1935
BsoBI CYCGRG 3 cut(s) 263, 932, 1461
Bsp1286I GDGCHC 1 cut(s) 1028
Bsp1407I TGTACA 1 cut(s) 558
Bsp143I GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
BspACI CCGC 4 cut(s) 887, 1044, 1470, 1770
BspANI GGCC 5 cut(s) 213, 405, 890, 1318, 1862
BspCNI CTCAG 2 cut(s) 181, 1663
BspDI ATCGAT 1 cut(s) 1215
BspHI TCATGA 1 cut(s) 87
BspLI GGNNCC 1 cut(s) 1971
BspMI ACCTGC 1 cut(s) 892
BspPI GGATC 3 cut(s) 321, 857, 1245
BspQI GCTCTTC 2 cut(s) 332, 1965
BspTNI GGTCTC 1 cut(s) 1935
BsrGI TGTACA 1 cut(s) 558
BsrI ACTGG 3 cut(s) 332, 891, 1402
BssECI CCNNGG 7 cut(s) 208, 465, 635, 778, 938, 1554, 1964
BssMI GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
BssNAI GTATAC 1 cut(s) 1531
BssSI CACGAG 1 cut(s) 216
BssT1I CCWWGG 3 cut(s) 208, 465, 1554
Bst1107I GTATAC 1 cut(s) 1531
Bst2BI CACGAG 1 cut(s) 216
Bst2UI CCWGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
Bst6I CTCTTC 4 cut(s) 332, 1075, 1266, 1965
BstAPI GCANNNNNTGC 1 cut(s) 518
BstAUI TGTACA 1 cut(s) 558
BstC8I GCNNGC 2 cut(s) 144, 514
BstDEI CTNAG 4 cut(s) 189, 425, 1183, 1671
BstDSI CCRYGG 1 cut(s) 938
BstENI CCTNNNNNAGG 1 cut(s) 1073
BstF5I GGATG 8 cut(s) 769, 788, 948, 1381, 1564, 1636, 1741, 2013
BstHHI GCGC 1 cut(s) 1127
BstKTI GATC 8 cut(s) 163, 316, 852, 1215, 1253, 1927, 1980, 2083
BstMAI GTCTC 5 cut(s) 364, 689, 1094, 1268, 1935
BstMBI GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
BstNI CCWGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
BstNSI RCATGY 1 cut(s) 516
BstPAI GACNNNNGTC 1 cut(s) 122
BstSCI CCNGG 7 cut(s) 634, 778, 1318, 1538, 1648, 1963, 2003
BstSFI CTRYAG 2 cut(s) 363, 2086
BstV1I GCAGC 6 cut(s) 151, 448, 553, 1181, 1778, 2014
BstV2I GAAGAC 1 cut(s) 1541
BstX2I RGATCY 1 cut(s) 849
BstYI RGATCY 1 cut(s) 849
BstZ17I GTATAC 1 cut(s) 1531
Bsu15I ATCGAT 1 cut(s) 1215
BsuI GTATCC 2 cut(s) 1427, 1798
BsuRI GGCC 5 cut(s) 213, 405, 890, 1318, 1862
BsuTUI ATCGAT 1 cut(s) 1215
BtgI CCRYGG 1 cut(s) 938
BtrI CACGTC 1 cut(s) 1898
BtsCI GGATG 8 cut(s) 769, 788, 948, 1381, 1564, 1636, 1741, 2013
BtsIMutI CAGTG 3 cut(s) 606, 1354, 1797
BveI ACCTGC 1 cut(s) 892
Cac8I GCNNGC 2 cut(s) 144, 514
CciI TCATGA 1 cut(s) 87
CfoI GCGC 1 cut(s) 1127
Cfr13I GGNCC 4 cut(s) 11, 212, 1066, 1913
ClaI ATCGAT 1 cut(s) 1215
CseI GACGC 1 cut(s) 1235
Csp6I GTAC 4 cut(s) 205, 559, 1405, 1785
CviAII CATG 7 cut(s) 31, 88, 513, 589, 664, 697, 1732
CviQI GTAC 4 cut(s) 205, 559, 1405, 1785
DdeI CTNAG 4 cut(s) 189, 425, 1183, 1671
DpnI GATC 8 cut(s) 162, 315, 851, 1214, 1252, 1926, 1979, 2082
DpnII GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
DraI TTTAAA 1 cut(s) 754
DriI GACNNNNNGTC 1 cut(s) 1749
EaeI YGGCCR 2 cut(s) 403, 888
Eam1104I CTCTTC 4 cut(s) 332, 1075, 1266, 1965
Eam1105I GACNNNNNGTC 1 cut(s) 1749
EarI CTCTTC 4 cut(s) 332, 1075, 1266, 1965
Eco130I CCWWGG 3 cut(s) 208, 465, 1554
Eco147I AGGCCT 2 cut(s) 1318, 1862
Eco31I GGTCTC 1 cut(s) 1935
Eco47I GGWCC 3 cut(s) 11, 1066, 1913
Eco57I CTGAAG 2 cut(s) 601, 1094
Eco88I CYCGRG 3 cut(s) 263, 932, 1461
EcoNI CCTNNNNNAGG 1 cut(s) 1073
EcoO109I RGGNCCY 1 cut(s) 1066
EcoRI GAATTC 2 cut(s) 233, 816
EcoRII CCWGG 7 cut(s) 634, 778, 1318, 1538, 1648, 1963, 2003
EcoT14I CCWWGG 3 cut(s) 208, 465, 1554
ErhI CCWWGG 3 cut(s) 208, 465, 1554
FaeI CATG 7 cut(s) 34, 91, 516, 592, 667, 700, 1735
FalI AAGNNNNNCTT 4 cut(s) 500, 532, 1352, 1384
FaqI GGGAC 1 cut(s) 1019
FatI CATG 7 cut(s) 30, 87, 512, 588, 663, 696, 1731
FauNDI CATATG 4 cut(s) 157, 246, 845, 1504
FblI GTMKAC 2 cut(s) 1530, 2052
Fnu4HI GCNGC 9 cut(s) 140, 462, 542, 888, 1044, 1170, 1767, 1770, 2028
FokI GGATG 8 cut(s) 776, 795, 955, 1388, 1571, 1643, 1748, 2020
Fsp4HI GCNGC 9 cut(s) 140, 462, 542, 888, 1044, 1170, 1767, 1770, 2028
FspBI CTAG 3 cut(s) 1761, 1842, 1919
GlaI GCGC 1 cut(s) 1126
GluI GCNGC 9 cut(s) 140, 462, 542, 888, 1044, 1170, 1767, 1770, 2028
HaeIII GGCC 5 cut(s) 213, 405, 890, 1318, 1862
HapII CCGG 1 cut(s) 743
HgaI GACGC 1 cut(s) 1235
HhaI GCGC 1 cut(s) 1127
Hin1II CATG 7 cut(s) 34, 91, 516, 592, 667, 700, 1735
Hin6I GCGC 1 cut(s) 1125
HinP1I GCGC 1 cut(s) 1125
HindIII AAGCTT 1 cut(s) 381
HinfI GANTC 6 cut(s) 585, 650, 836, 1276, 1281, 1520
HpaII CCGG 1 cut(s) 743
HphI GGTGA 6 cut(s) 379, 481, 957, 1491, 1826, 1934
Hpy166II GTNNAC 8 cut(s) 103, 205, 559, 900, 1092, 1481, 1531, 2053
Hpy188III TCNNGA 9 cut(s) 88, 110, 317, 568, 1010, 1259, 1431, 1564, 1754
Hpy8I GTNNAC 8 cut(s) 103, 205, 559, 900, 1092, 1481, 1531, 2053
Hpy99I CGWCG 1 cut(s) 1229
HpyAV CCTTC 9 cut(s) 304, 466, 850, 1069, 1079, 1189, 1256, 1406, 1561
HpyCH4IV ACGT 5 cut(s) 409, 693, 1546, 1897, 2049
HpyF3I CTNAG 4 cut(s) 189, 425, 1183, 1671
HpySE526I ACGT 5 cut(s) 409, 693, 1546, 1897, 2049
Hsp92II CATG 7 cut(s) 34, 91, 516, 592, 667, 700, 1735
HspAI GCGC 1 cut(s) 1125
Kzo9I GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
LguI GCTCTTC 2 cut(s) 332, 1965
LmnI GCTCC 4 cut(s) 499, 668, 951, 1023
Lsp1109I GCAGC 6 cut(s) 151, 448, 553, 1181, 1778, 2014
LweI GCATC 6 cut(s) 248, 528, 754, 933, 1621, 1747
MaeI CTAG 3 cut(s) 1761, 1842, 1919
MaeII ACGT 5 cut(s) 409, 693, 1546, 1897, 2049
MaeIII GTNAC 8 cut(s) 115, 298, 545, 1472, 1507, 1542, 1561, 1988
MalI GATC 8 cut(s) 162, 315, 851, 1214, 1252, 1926, 1979, 2082
MboI GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
MfeI CAATTG 1 cut(s) 1191
MflI RGATCY 1 cut(s) 849
MhlI GDGCHC 1 cut(s) 1028
MlsI TGGCCA 1 cut(s) 405
MluCI AATT 9 cut(s) 39, 233, 371, 597, 816, 912, 1004, 1191, 1703
MluNI TGGCCA 1 cut(s) 405
MlyI GAGTC 2 cut(s) 1270, 1275
MmeI TCCRAC 3 cut(s) 1039, 1309, 1621
Mox20I TGGCCA 1 cut(s) 405
MroXI GAANNNNTTC 1 cut(s) 23
MscI TGGCCA 1 cut(s) 405
MseI TTAA 7 cut(s) 333, 690, 702, 753, 1152, 1617, 1656
MslI CAYNNNNRTG 1 cut(s) 1730
Msp20I TGGCCA 1 cut(s) 405
MspA1I CMGCKG 2 cut(s) 1046, 1470
MspI CCGG 1 cut(s) 743
MspR9I CCNGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
MunI CAATTG 1 cut(s) 1191
MvaI CCWGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
NdeI CATATG 4 cut(s) 157, 246, 845, 1504
NdeII GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
NlaIII CATG 7 cut(s) 34, 91, 516, 592, 667, 700, 1735
NlaIV GGNNCC 1 cut(s) 1971
NmuCI GTSAC 3 cut(s) 115, 298, 1561
NspI RCATGY 1 cut(s) 516
PaeI GCATGC 1 cut(s) 516
PaeR7I CTCGAG 1 cut(s) 932
PagI TCATGA 1 cut(s) 87
PaqCI CACCTGC 1 cut(s) 892
PceI AGGCCT 2 cut(s) 1318, 1862
PciSI GCTCTTC 2 cut(s) 332, 1965
PcsI WCGNNNNNNNCGW 1 cut(s) 1221
PdmI GAANNNNTTC 1 cut(s) 23
PfeI GAWTC 4 cut(s) 585, 650, 836, 1520
PfoI TCCNGGA 1 cut(s) 1648
PkrI GCNGC 9 cut(s) 141, 463, 543, 889, 1045, 1171, 1768, 1771, 2029
PleI GAGTC 2 cut(s) 1270, 1275
PpsI GAGTC 2 cut(s) 1270, 1275
PpuMI RGGWCCY 1 cut(s) 1066
PshAI GACNNNNGTC 1 cut(s) 122
Psp5II RGGWCCY 1 cut(s) 1066
Psp6I CCWGG 7 cut(s) 634, 778, 1318, 1538, 1648, 1963, 2003
PspGI CCWGG 7 cut(s) 634, 778, 1318, 1538, 1648, 1963, 2003
PspN4I GGNNCC 1 cut(s) 1971
PspPI GGNCC 4 cut(s) 11, 212, 1066, 1913
PspPPI RGGWCCY 1 cut(s) 1066
PspXI VCTCGAGB 1 cut(s) 932
PsuI RGATCY 1 cut(s) 849
RsaI GTAC 4 cut(s) 206, 560, 1406, 1786
RsaNI GTAC 4 cut(s) 205, 559, 1405, 1785
RseI CAYNNNNRTG 1 cut(s) 1730
SapI GCTCTTC 2 cut(s) 332, 1965
SaqAI TTAA 7 cut(s) 333, 690, 702, 753, 1152, 1617, 1656
SatI GCNGC 9 cut(s) 140, 462, 542, 888, 1044, 1170, 1767, 1770, 2028
Sau3AI GATC 8 cut(s) 160, 313, 849, 1212, 1250, 1924, 1977, 2080
Sau96I GGNCC 4 cut(s) 11, 212, 1066, 1913
SchI GAGTC 2 cut(s) 1270, 1275
ScrFI CCNGG 7 cut(s) 636, 780, 1320, 1540, 1650, 1965, 2005
SduI GDGCHC 1 cut(s) 1028
SfaNI GCATC 6 cut(s) 248, 528, 754, 933, 1621, 1747
SfcI CTRYAG 2 cut(s) 363, 2086
Sfr274I CTCGAG 1 cut(s) 932
SinI GGWCC 3 cut(s) 11, 1066, 1913
SlaI CTCGAG 1 cut(s) 932
SmiMI CAYNNNNRTG 1 cut(s) 1730
SmlI CTYRAG 1 cut(s) 932
SmoI CTYRAG 1 cut(s) 932
SphI GCATGC 1 cut(s) 516
Sse9I AATT 9 cut(s) 39, 233, 371, 597, 816, 912, 1004, 1191, 1703
SseBI AGGCCT 2 cut(s) 1318, 1862
SsiI CCGC 4 cut(s) 887, 1044, 1470, 1770
SspI AATATT 2 cut(s) 906, 2067
SspMI CTAG 3 cut(s) 1761, 1842, 1919
StuI AGGCCT 2 cut(s) 1318, 1862
StyD4I CCNGG 7 cut(s) 634, 778, 1318, 1538, 1648, 1963, 2003
StyI CCWWGG 3 cut(s) 208, 465, 1554
TaiI ACGT 5 cut(s) 412, 696, 1549, 1900, 2052
TaqI TCGA 8 cut(s) 111, 240, 933, 1215, 1279, 1611, 1857, 1953
TaqII GACCGA 1 cut(s) 1917
TasI AATT 9 cut(s) 39, 233, 371, 597, 816, 912, 1004, 1191, 1703
TatI WGTACW 1 cut(s) 558
TauI GCSGC 3 cut(s) 890, 1046, 1772
TfiI GAWTC 4 cut(s) 585, 650, 836, 1520
Tru1I TTAA 7 cut(s) 333, 690, 702, 753, 1152, 1617, 1656
Tru9I TTAA 7 cut(s) 333, 690, 702, 753, 1152, 1617, 1656
TscAI CASTG 3 cut(s) 613, 1354, 1804
TseFI GTSAC 3 cut(s) 115, 298, 1561
TseI GCWGC 6 cut(s) 139, 461, 541, 1169, 1766, 2027
Tsp45I GTSAC 3 cut(s) 115, 298, 1561
TspGWI ACGGA 1 cut(s) 423
TspRI CASTG 3 cut(s) 613, 1354, 1804
VpaK11BI GGWCC 3 cut(s) 11, 1066, 1913
XagI CCTNNNNNAGG 1 cut(s) 1073
XapI RAATTY 5 cut(s) 39, 233, 371, 816, 1004
XceI RCATGY 1 cut(s) 516
XcmI CCANNNNNNNNNTGG 1 cut(s) 829
XhoI CTCGAG 1 cut(s) 932
XmiI GTMKAC 2 cut(s) 1530, 2052
XmnI GAANNNNTTC 1 cut(s) 23
XspI CTAG 3 cut(s) 1761, 1842, 1919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.