RLG00000034966

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
57780011 .. 57786985
6975 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034966

Sequence Viewer

Length: 4341 bp
ATGGCGGCGGCATCAATGGCCGGAGAAGACTTAATAAGGCAGTCGAGCAGCCGGAGGAGCTCGCTGTCGAGCAGCCGGAGGAGCTGGCGGTCGACGAGTGTCCGAGAAATGTGGAACGCGCCGGACGTGTTCCAGCGGAGCGTCCGGCAGCCGGTGTTGGACGAGGAGGAGGAGCTCAAGTGGGCGGCCATAGAGCGGTTGCCGACTTATGATAGGATGAGGAGAGGCATGTTGAGGAATGTGATGAGCAATGGAAGGGTCGTGGCTGAAGAAGTCGACGTTGCGCATCTTGGGGATCAAGATAAGAAGCAGTTGATGGAGAGCATACTCAAGGTTATTGAGGAGGATAATGAAAAGTTCTTGAAGAAGCTCAGGGCCAGAAATGACAGGGTTGGGATTGATATTCCTAAAGTTGAGGTTAGATTCCAGAATTTATCAATCGAGGGAGATGCGTTTGTAGGCACCAGAGCACTTCCGACTCTGTGGAATTCCACCTTGAACGCAATAGAGGGAATACTGGGACTTGTTGGACTTTCACCATCGAAGAAAAGAGTTGTTAAGATACTACAAGATGTTAGTGGTATTATCAAACCAGCAAGGATGACACTTCTTCTTGGGCCTCCTGGATCAGGAAAAACAACATTGCTAAAAGCAGTTTCTGGCAAACTAGATAGGGATCTTAGGGTAAATGGGAAAGTGACTTACTGCGGCCATGAATTTAATGAATTTGTACCTCAGAGAACCTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACATTTGATTTCTCCGGACGTTGCCTAGGAGTTGGAACAAGGTATGATATACTAGTAGAGTTGTCTAGACGGGAGAAAGATGCAGGTATCAAACCAGATCCTGGGATTGATGCATACATGAAAGCCACATCTGTGGAGGGACAGGAAACAAGTTTGATCACAGATTATGTTCTCAAGATACTTGGATTAGATATCTGTGCCGATATTATGGTGGGTGATGACATGAGAAGGGGAATATCCGGTGGACAAAAGAAGCGTGTCACGACTGGAGAAATGTTGGTTGGACCAGCAAAAGCATTTTTCATGGATGAAATATCAACGGGGTTGGACAGTTCCACAACCTTTCAGATAATCAAATACATGAGACAGATGGTTCACATTATGGATGTGTCAATGGTCGTCTCTCTCTTGCAGCCTGCACCTGAGACGTACGATCTTTTTGATGATATTATCCTTCTTTCCGAGGGTCAGATTGTTTATCAGGGCCCACGTGAGAATGTCCTCGAGTTCTTTGAATATATGGGATTCAAATGCCCTGACAGAAAAGGTGTCGCAGACTTCTTGCAAGAAGTGACCTCAAGGAAGGACCAGGAACAATACTGGTGTAAGAAGAACCAACCTTACAGATTAGTCACAGTATCTGATTTTGCTCGGGCGTTCGGCTCCTTCCATGTTGGCCAACGGCTTGGGGAAGAACTAAGAGTTCCTTATGATAAAAGACATGCCCATCCTGCTGCTTTGGTCAAGGAAAAGTATGGAATATCCAATAAGGAGCTCTTCAAAGCATGCTTTGCAAGGGAATGGCTCCTAATGAAGCGGAACTCTTTTGTGTACATATTCAAAACTACACAGATTGCCATCATGGCTACAATTGCTTTGACCGTATTCTTAAGAACAAAAATGAAACCTGGGGAACTAGATGGTGCAGCAAAGTATTGGGGGGCAATGTTTTTCAGTCTCATTAACGTCATGTTTAATGGAGTGGCAGAGCTTGCAATGACAGTTTTCCGGCTTCCAGTGTTCTTTAAACAGAGGGATGCCTTGTTCTATCCAGCGTGGGCTTTTGCCTTGCCCATTTGGGTGACCAGAATTCCTGTTTCAGTGTTGGAATCTGCGATATGGATCATTTTTACCTATTACACCATTGGATTTGCACCTGATCCTAGTAGGTTCTTCAAACAGTTATTGGCTTTCATTGGTATAAGTCAGATGGCACTCTCCCTCTTCCGTTTCATTGCAGCGCTTGGAAGATCAGATGTGGTTGCTAACACAATTGGTTCATTTACACTGCTATTGGTATTTATCCTAGGAGGTTATATTGTTGCTAAAGTTCTCAAGTTTAACAAGAACTTTTTTCTCTCCTTGGAACAGCCCCCCAGCAACACCTCCACTCAGCCTACACTTGGAAAAGCCCTTCTCAGAGAAAGAGGCCTGTACACTGAAGAATATTGGTATTGGATTTGTGTTGGAGCGCTTTTTGGGTTTTCTTTTATTTTCAATGGGCTGTTCATTGCAGCACTCACCTACTTGAACCCCCTTGGCGACAACAAAGGTCTAATTGTGGAGGATGATTCTGAAACCAAGAGGAGGCCACAATTGACAGAAGGTATTGATATGCAAGTGAGAACTGCAGAAGGAACTTCAAATGGACAAGCCAAGCGAGGAATGGTGTTGCCTTTCCAGCCCCTTTCACTCGCTTTCAGCCATGTGAACTACTATGTGGATATGCCTGCGGAGATGAAGACCCAAGGTATTGAAGAGAACCGACTGCAACTACTAAGAGATGTTAACGGGGCATTCAGGCCCGGAGTTCTCACTGCATTAGTTGGCGTTAGCGGTGCTGGAAAAACTACTTTGATGGATGTCTTAGCTGGAAGAAAGACTGGTGGATATATAGAAGGAAGTATTAGTATCTCAGGTTATCCAAAAAACCAAGCCACATTTGCTCGGGTTAGCGGTTATTGTGAACAGAACGACATTCATTCACCATATGTTACTGTTTATGAATCTCTGCTATACTCTGCCTGGCTACGTCTTTCTAAGGACGTTGACAAAAGCAAGCGAAAGATGTTTGTTGATGAAGTTATGGACTTGGTGGAGCTTAACCCCTTGAGGAATGCTTTAGTTGGACTTCCAGGAGTTGATGGACTTTCAACTGAACAAAGAAAGAGGCTGACCATTGCTGTAGAATTGGTTGCAAATCCTTCCATTATCTTTATGGATGAGCCAACATCAGGGCTTGATGCTAGAGCAGCTGCCATTGTTATGCGTACTGTAAGAAACACCGTCGATACTGGACGAACTGTTGTCTGCACCATTCACCAACCTAGCATTGACATTTTCGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGATTTATGCTGGACCTCTTGGTGATCGGTCTCACAAACTTGTTGAATATTTTGAGGCCATTCCAGGAGTTCCCAAGATAAAAGACGGCTACAACCCTGCTACATGGATGTTAGAGGTCAGCTCTGCTGCAGTTGAGGCTCAAAATAACATTGATTTTGCCGAAATATATGCAAACTCTGAGCTGTATAGGAGCGTTCAAGAACTTATCAAGGAATTGAGCACACCACTCCCAGGCTCCAAGGACCTTTACTTCCCCACCCAATACTCGCAAAGCTTCCCAACTCAATGCAAGGCTTGCTTTTGGAAACAACACTGGTCATACTGGAGGAATTCACAGTACAATGCCATCAGGTTTTTCAACACAATAGTCATCGGCGTACTTTTTGGCGTCATCTTCTGGAAGAAAGGAAACGTGTTAGAGAAACAACAAGATATTATTAACCTTCTGGGAGCAACCTATTCTGCTGTTCTTTTCCTTGGAGCGGGAAATGCTTCTGCTGTGCAATCTGTGGTTGCGATTGAGAGAACAGTTTTCTACCGAGAAAGAGCAGCAGGAATGTATTCAGAGTTGCCTTATGCATTTGCTCAGGTGGCCATTGAGACGATTTATGTTGCTATACAAACATTCATTTATTCCCTTCTTCTATTTACCATGATCGGCTATGAATTTAAAGTTGAGAAATTTTTGTATTTCTACTACTTTATATTCATGTGTTTTACATACATGTCAATGTATGGAATGATGGTGGTTGCCTTAACTCCCGGCCATCAAATCGCTGCAATTGTCATGTCCTTCTTCATGAGTTTCTGGAATTTGTTCTCCGGTTTCCTCCTCGCTAGACCGGTAAAATTGAGTATGACAATATTCATTCTTAAATTTGCAGCACTCCCGATATGGTGGAGGTGGTACTACTGGGGTTCTCCAATTGCTTGGACAATTTACGGTGTCCAATCATCTCAATTCGGTGACCGGAATGATAAGTATGTCGAACTTTCTACTGGAATCAAAGTAAGATTGGATCTATTCCTTAAGTCGACTTGGGGTTATGACCACGACTTCCTCATACCAGTTGTCGTCGCTCATGTTGGTTGGGTCCTCCTCTTCTTCTTTGTCTTTGCTTATGGTATCAAGTACCTTAACTTCCAGAGGAGATGA

Protein Analysis

1447

Amino Acids

163.76

Weight (kDa)

8.85

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 115 - 163 4.3e-09 ABC-transporter N-terminal
ABC_tran PF00005 189 - 370 1.2e-14 ABC transporter
ABC2_membrane_7 PF19055 404 - 455 9.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 525 - 707 1.2e-35 ABC-2 type transporter
PDR_assoc PF08370 727 - 785 3.1e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 859 - 1011 8.2e-20 ABC transporter
ABC2_membrane PF01061 1156 - 1383 1.3e-45 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 285
Acc36I ACCTGC 1 cut(s) 872
AccB1I GGYRCC 1 cut(s) 461
AccB7I CCANNNNNTGG 1 cut(s) 899
AccBSI CCGCTC 2 cut(s) 196, 3668
AccI GTMKAC 3 cut(s) 92, 276, 4220
AccII CGCG 1 cut(s) 119
AccIII TCCGGA 1 cut(s) 812
AclWI GGATC 7 cut(s) 303, 634, 684, 890, 1928, 1952, 4212
AcoI YGGCCR 6 cut(s) 18, 186, 709, 1474, 3777, 3949
AcuI CTGAAG 2 cut(s) 288, 2259
AcvI CACGTG 1 cut(s) 1289
AcyI GRCGYC 1 cut(s) 3573
AfaI GTAC 9 cut(s) 732, 1229, 1631, 2234, 3070, 3524, 3564, 4094, 4319
AfeI AGCGCT 2 cut(s) 2040, 2271
AfiI CCNNNNNNNGG 9 cut(s) 151, 195, 629, 899, 2201, 2385, 3032, 3416, 3667
AflII CTTAAG 2 cut(s) 1687, 4214
AflIII ACRYGT 3 cut(s) 126, 3597, 3909
AgeI ACCGGT 1 cut(s) 4027
AhlI ACTAGT 1 cut(s) 850
AjiI CACGTC 1 cut(s) 127
AjnI CCWGG 8 cut(s) 622, 898, 1386, 1705, 2822, 2932, 3247, 3415
AjuI GAANNNNNNNTTGG 2 cut(s) 1062, 1094
AleI CACNNNNGTG 1 cut(s) 929
AloI GAACNNNNNNTCC 2 cut(s) 1826, 1858
Alw21I GWGCWC 5 cut(s) 62, 177, 472, 1575, 3407
Alw26I GTCTC 6 cut(s) 1156, 1204, 1217, 1760, 3219, 3779
AlwI GGATC 7 cut(s) 303, 634, 684, 890, 1928, 1952, 4212
AlwNI CAGNNNCTG 3 cut(s) 659, 899, 1439
Ama87I CYCGRG 3 cut(s) 1301, 1449, 2745
Aor13HI TCCGGA 1 cut(s) 812
Aor51HI AGCGCT 2 cut(s) 2040, 2271
ApaI GGGCCC 1 cut(s) 1286
AsiGI ACCGGT 1 cut(s) 4027
Asp700I GAANNNNTTC 3 cut(s) 3676, 3745, 4001
AspA2I CCTAGG 2 cut(s) 823, 2104
AspLEI GCGC 4 cut(s) 121, 286, 2041, 2272
AsuC2I CCSGG 2 cut(s) 2604, 3948
AsuHPI GGTGA 9 cut(s) 528, 791, 1025, 1891, 2311, 2775, 3110, 3218, 4163
AsuII TTCGAA 1 cut(s) 3141
AvaI CYCGRG 3 cut(s) 1301, 1449, 2745
AvaII GGWCC 5 cut(s) 1082, 1384, 3197, 3427, 4279
AvrII CCTAGG 2 cut(s) 823, 2104
BaeGI GKGCMC 1 cut(s) 1286
BalI TGGCCA 2 cut(s) 1476, 3779
BanI GGYRCC 1 cut(s) 461
BanII GRGCYC 4 cut(s) 62, 177, 1286, 1575
BarI GAAGNNNNNNTAC 1 cut(s) 4310
BbrPI CACGTG 1 cut(s) 1289
BbsI GAAGAC 2 cut(s) 33, 2546
Bbv12I GWGCWC 5 cut(s) 62, 177, 472, 1575, 3407
BceAI ACGGC 2 cut(s) 1496, 3286
BcgI CGANNNNNNTGC 4 cut(s) 431, 465, 3335, 3369
BciT130I CCWGG 8 cut(s) 624, 900, 1388, 1707, 2824, 2934, 3249, 3417
BclI TGATCA 1 cut(s) 954
BcnI CCSGG 2 cut(s) 2604, 3948
BcoDI GTCTC 6 cut(s) 1156, 1204, 1217, 1760, 3219, 3779
BcuI ACTAGT 1 cut(s) 850
BfmI CTRYAG 3 cut(s) 2427, 2982, 3312
BfoI RGCGCY 2 cut(s) 2042, 2273
BfrI CTTAAG 2 cut(s) 1687, 4214
BfuAI ACCTGC 1 cut(s) 872
BglI GCCNNNNNGGC 1 cut(s) 1661
BlnI CCTAGG 2 cut(s) 823, 2104
Bme18I GGWCC 5 cut(s) 1082, 1384, 3197, 3427, 4279
BmeT110I CYCGRG 3 cut(s) 1301, 1449, 2745
BmgBI CACGTC 1 cut(s) 127
BmiI GGNNCC 6 cut(s) 463, 1284, 1462, 1604, 3421, 4280
BmrI ACTGGG 2 cut(s) 527, 4108
BmsI GCATC 7 cut(s) 20, 295, 439, 868, 898, 1825, 3031
BmuI ACTGGG 2 cut(s) 527, 4108
BoxI GACNNNNGTC 1 cut(s) 98
BpiI GAAGAC 2 cut(s) 33, 2546
BplI GAGNNNNNCTC 2 cut(s) 3290, 3322
BpmI CTGGAG 2 cut(s) 1086, 3529
Bpu10I CCTNAGC 2 cut(s) 371, 3771
Bpu14I TTCGAA 1 cut(s) 3141
BpuEI CTTGAG 6 cut(s) 161, 314, 956, 1360, 2117, 2929
BpuMI CCSGG 2 cut(s) 2604, 3948
BsaAI YACGTR 1 cut(s) 1289
BsaBI GATNNNNATC 3 cut(s) 675, 1655, 1919
BsaHI GRCGYC 1 cut(s) 3573
BsaI GGTCTC 1 cut(s) 3219
BsaWI WCCGGW 5 cut(s) 812, 1037, 4007, 4027, 4155
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 3168, 3198
Bsc4I CCNNNNNNNGG 9 cut(s) 151, 195, 629, 899, 2201, 2385, 3032, 3416, 3667
Bse118I RCCGGY 2 cut(s) 151, 4027
Bse3DI GCAATG 7 cut(s) 256, 641, 1749, 1800, 2031, 2307, 2976
Bse8I GATNNNNATC 3 cut(s) 675, 1655, 1919
BseAI TCCGGA 1 cut(s) 812
BseBI CCWGG 8 cut(s) 624, 900, 1388, 1707, 2824, 2934, 3249, 3417
BseJI GATNNNNATC 3 cut(s) 675, 1655, 1919
BseLI CCNNNNNNNGG 9 cut(s) 151, 195, 629, 899, 2201, 2385, 3032, 3416, 3667
BseMI GCAATG 7 cut(s) 256, 641, 1749, 1800, 2031, 2307, 2976
BseMII CTCAG 8 cut(s) 385, 749, 1212, 2204, 2230, 2727, 3354, 3785
BseSI GKGCMC 1 cut(s) 1286
BseYI CCCAGC 1 cut(s) 2174
BsgI GTGCAG 3 cut(s) 1200, 1743, 3094
Bsh1236I CGCG 1 cut(s) 119
Bsh1285I CGRYCG 1 cut(s) 92
BshNI GGYRCC 1 cut(s) 461
BshTI ACCGGT 1 cut(s) 4027
BsiEI CGRYCG 1 cut(s) 92
BsiHKAI GWGCWC 5 cut(s) 62, 177, 472, 1575, 3407
BsiHKCI CYCGRG 3 cut(s) 1301, 1449, 2745
BsiWI CGTACG 1 cut(s) 1227
BslFI GGGAC 2 cut(s) 534, 951
BslI CCNNNNNNNGG 9 cut(s) 151, 195, 629, 899, 2201, 2385, 3032, 3416, 3667
BsmAI GTCTC 6 cut(s) 1156, 1204, 1217, 1760, 3219, 3779
BsmBI CGTCTC 3 cut(s) 1204, 1217, 3779
BsmFI GGGAC 2 cut(s) 534, 951
BsmI GAATGC 2 cut(s) 2594, 2920
Bso31I GGTCTC 1 cut(s) 3219
BsoBI CYCGRG 3 cut(s) 1301, 1449, 2745
Bsp119I TTCGAA 1 cut(s) 3141
Bsp120I GGGCCC 1 cut(s) 1282
Bsp1286I GDGCHC 6 cut(s) 62, 177, 472, 1286, 1575, 3407
Bsp13I TCCGGA 1 cut(s) 812
Bsp1407I TGTACA 2 cut(s) 1629, 2232
BspCNI CTCAG 8 cut(s) 384, 748, 1213, 2203, 2229, 2726, 3355, 3784
BspEI TCCGGA 1 cut(s) 812
BspFNI CGCG 1 cut(s) 119
BspHI TCATGA 1 cut(s) 3984
BspLI GGNNCC 6 cut(s) 463, 1284, 1462, 1604, 3421, 4280
BspMAI CTGCAG 2 cut(s) 2431, 3316
BspMI ACCTGC 1 cut(s) 872
BspPI GGATC 7 cut(s) 303, 634, 684, 890, 1928, 1952, 4212
BspQI GCTCTTC 1 cut(s) 1580
BspT104I TTCGAA 1 cut(s) 3141
BspT107I GGYRCC 1 cut(s) 461
BspTI CTTAAG 2 cut(s) 1687, 4214
BspTNI GGTCTC 1 cut(s) 3219
BsrBI CCGCTC 2 cut(s) 196, 3668
BsrDI GCAATG 7 cut(s) 256, 641, 1749, 1800, 2031, 2307, 2976
BsrFI RCCGGY 2 cut(s) 151, 4027
BsrGI TGTACA 2 cut(s) 1629, 2232
BssAI RCCGGY 2 cut(s) 151, 4027
BssNI GRCGYC 1 cut(s) 3573
BssT1I CCWWGG 7 cut(s) 823, 2104, 2160, 2335, 2545, 3423, 3661
Bst2UI CCWGG 8 cut(s) 624, 900, 1388, 1707, 2824, 2934, 3249, 3417
Bst6I CTCTTC 4 cut(s) 1580, 2027, 2550, 4292
BstACI GRCGYC 1 cut(s) 3573
BstAFI CTTAAG 2 cut(s) 1687, 4214
BstAPI GCANNNNNTGC 3 cut(s) 1589, 1790, 3480
BstAUI TGTACA 2 cut(s) 1629, 2232
BstBAI YACGTR 1 cut(s) 1289
BstBI TTCGAA 1 cut(s) 3141
BstC8I GCNNGC 9 cut(s) 62, 86, 761, 1215, 1585, 1791, 2529, 2858, 3481
BstEII GGTNACC 2 cut(s) 1879, 4151
BstENI CCTNNNNNAGG 1 cut(s) 627
BstFNI CGCG 1 cut(s) 119
BstH2I RGCGCY 2 cut(s) 2042, 2273
BstHHI GCGC 4 cut(s) 121, 286, 2041, 2272
BstMAI GTCTC 6 cut(s) 1156, 1204, 1217, 1760, 3219, 3779
BstMCI CGRYCG 1 cut(s) 92
BstNI CCWGG 8 cut(s) 624, 900, 1388, 1707, 2824, 2934, 3249, 3417
BstNSI RCATGY 4 cut(s) 232, 1523, 1587, 3913
BstPAI GACNNNNGTC 1 cut(s) 98
BstPI GGTNACC 2 cut(s) 1879, 4151
BstSFI CTRYAG 3 cut(s) 2427, 2982, 3312
BstSLI GKGCMC 1 cut(s) 1286
BstUI CGCG 1 cut(s) 119
BstV2I GAAGAC 2 cut(s) 33, 2546
BstX2I RGATCY 3 cut(s) 676, 895, 4204
BstXI CCANNNNNNTGG 3 cut(s) 931, 1484, 4116
BstYI RGATCY 3 cut(s) 676, 895, 4204
BtrI CACGTC 1 cut(s) 127
BtsI GCAGTG 2 cut(s) 2084, 2613
BtsIMutI CAGTG 6 cut(s) 1821, 1905, 2084, 2235, 2613, 3496
BveI ACCTGC 1 cut(s) 872
Cac8I GCNNGC 9 cut(s) 62, 86, 761, 1215, 1585, 1791, 2529, 2858, 3481
CaiI CAGNNNCTG 3 cut(s) 659, 899, 1439
CciI TCATGA 1 cut(s) 3984
CfoI GCGC 4 cut(s) 121, 286, 2041, 2272
Cfr10I RCCGGY 2 cut(s) 151, 4027
CseI GACGC 2 cut(s) 130, 3562
Csp6I GTAC 9 cut(s) 731, 1228, 1630, 2233, 3069, 3523, 3563, 4093, 4318
CspAI ACCGGT 1 cut(s) 4027
CviQI GTAC 9 cut(s) 731, 1228, 1630, 2233, 3069, 3523, 3563, 4093, 4318
DraI TTTAAA 2 cut(s) 1825, 3856
EaeI YGGCCR 6 cut(s) 18, 186, 709, 1474, 3777, 3949
Eam1104I CTCTTC 4 cut(s) 1580, 2027, 2550, 4292
EarI CTCTTC 4 cut(s) 1580, 2027, 2550, 4292
Ecl136II GAGCTC 3 cut(s) 60, 175, 1573
Eco130I CCWWGG 7 cut(s) 823, 2104, 2160, 2335, 2545, 3423, 3661
Eco147I AGGCCT 1 cut(s) 2229
Eco24I GRGCYC 4 cut(s) 62, 177, 1286, 1575
Eco31I GGTCTC 1 cut(s) 3219
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 5 cut(s) 1082, 1384, 3197, 3427, 4279
Eco47III AGCGCT 2 cut(s) 2040, 2271
Eco53kI GAGCTC 3 cut(s) 60, 175, 1573
Eco57I CTGAAG 2 cut(s) 288, 2259
Eco72I CACGTG 1 cut(s) 1289
Eco88I CYCGRG 3 cut(s) 1301, 1449, 2745
Eco91I GGTNACC 2 cut(s) 1879, 4151
EcoICRI GAGCTC 3 cut(s) 60, 175, 1573
EcoNI CCTNNNNNAGG 1 cut(s) 627
EcoO109I RGGNCCY 3 cut(s) 1282, 3427, 4279
EcoO65I GGTNACC 2 cut(s) 1879, 4151
EcoRI GAATTC 3 cut(s) 487, 1887, 3514
EcoRII CCWGG 8 cut(s) 622, 898, 1386, 1705, 2822, 2932, 3247, 3415
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 7 cut(s) 823, 2104, 2160, 2335, 2545, 3423, 3661
EcoT22I ATGCAT 2 cut(s) 913, 3766
EcoT38I GRGCYC 4 cut(s) 62, 177, 1286, 1575
ErhI CCWWGG 7 cut(s) 823, 2104, 2160, 2335, 2545, 3423, 3661
Esp3I CGTCTC 3 cut(s) 1204, 1217, 3779
FalI AAGNNNNNCTT 6 cut(s) 1489, 1521, 1559, 1591, 3467, 3499
FaqI GGGAC 2 cut(s) 534, 951
FauI CCCGC 1 cut(s) 3661
FauNDI CATATG 1 cut(s) 2788
FbaI TGATCA 1 cut(s) 954
FblI GTMKAC 3 cut(s) 92, 276, 4220
FriOI GRGCYC 4 cut(s) 62, 177, 1286, 1575
FspI TGCGCA 1 cut(s) 285
GlaI GCGC 4 cut(s) 120, 285, 2040, 2271
GsaI CCCAGC 1 cut(s) 2178
GsuI CTGGAG 2 cut(s) 1086, 3529
HaeII RGCGCY 2 cut(s) 2042, 2273
HgaI GACGC 2 cut(s) 130, 3562
HhaI GCGC 4 cut(s) 121, 286, 2041, 2272
Hin1I GRCGYC 1 cut(s) 3573
Hin6I GCGC 4 cut(s) 119, 284, 2039, 2270
HinP1I GCGC 4 cut(s) 119, 284, 2039, 2270
HincII GTYRAC 5 cut(s) 93, 277, 2587, 2848, 4221
HindII GTYRAC 5 cut(s) 93, 277, 2587, 2848, 4221
HindIII AAGCTT 2 cut(s) 3144, 3457
HinfI GANTC 7 cut(s) 423, 478, 1323, 1907, 2369, 2804, 4188
HpaI GTTAAC 1 cut(s) 2587
HphI GGTGA 9 cut(s) 528, 791, 1025, 1891, 2311, 2775, 3110, 3218, 4163
Hpy99I CGWCG 4 cut(s) 97, 281, 3089, 4265
HpyCH4IV ACGT 9 cut(s) 126, 279, 817, 1226, 1288, 1764, 2830, 2844, 3597
HpySE526I ACGT 9 cut(s) 126, 279, 817, 1226, 1288, 1764, 2830, 2844, 3597
Hsp92I GRCGYC 1 cut(s) 3573
HspAI GCGC 4 cut(s) 119, 284, 2039, 2270
Kpn2I TCCGGA 1 cut(s) 812
Ksp22I TGATCA 1 cut(s) 954
KspAI GTTAAC 1 cut(s) 2587
LguI GCTCTTC 1 cut(s) 1580
LweI GCATC 7 cut(s) 20, 295, 439, 868, 898, 1825, 3031
MaeII ACGT 9 cut(s) 126, 279, 817, 1226, 1288, 1764, 2830, 2844, 3597
MaeIII GTNAC 7 cut(s) 697, 1057, 1369, 1429, 1879, 2791, 4151
MbiI CCGCTC 2 cut(s) 196, 3668
MfeI CAATTG 5 cut(s) 1668, 2070, 2393, 3966, 4110
MflI RGATCY 3 cut(s) 676, 895, 4204
MhlI GDGCHC 6 cut(s) 62, 177, 472, 1286, 1575, 3407
MlsI TGGCCA 2 cut(s) 1476, 3779
MluNI TGGCCA 2 cut(s) 1476, 3779
MlyI GAGTC 1 cut(s) 472
MmeI TCCRAC 9 cut(s) 138, 500, 508, 811, 1060, 1104, 1884, 2245, 2905
Mox20I TGGCCA 2 cut(s) 1476, 3779
Mph1103I ATGCAT 2 cut(s) 913, 3766
MroI TCCGGA 1 cut(s) 812
MroXI GAANNNNTTC 3 cut(s) 3676, 3745, 4001
MscI TGGCCA 2 cut(s) 1476, 3779
MslI CAYNNNNRTG 5 cut(s) 777, 929, 1877, 3062, 3914
Msp20I TGGCCA 2 cut(s) 1476, 3779
MspA1I CMGCKG 2 cut(s) 136, 3053
MspCI CTTAAG 2 cut(s) 1687, 4214
MunI CAATTG 5 cut(s) 1668, 2070, 2393, 3966, 4110
Mva1269I GAATGC 2 cut(s) 2594, 2920
MvaI CCWGG 8 cut(s) 624, 900, 1388, 1707, 2824, 2934, 3249, 3417
MvnI CGCG 1 cut(s) 119
NciI CCSGG 2 cut(s) 2604, 3948
NdeI CATATG 1 cut(s) 2788
NlaIV GGNNCC 6 cut(s) 463, 1284, 1462, 1604, 3421, 4280
NmuCI GTSAC 6 cut(s) 697, 1057, 1369, 1429, 1879, 4151
NsbI TGCGCA 1 cut(s) 285
NsiI ATGCAT 2 cut(s) 913, 3766
NspI RCATGY 4 cut(s) 232, 1523, 1587, 3913
NspV TTCGAA 1 cut(s) 3141
OliI CACNNNNGTG 1 cut(s) 929
PaeI GCATGC 1 cut(s) 1587
PaeR7I CTCGAG 1 cut(s) 1301
PagI TCATGA 1 cut(s) 3984
PceI AGGCCT 1 cut(s) 2229
PciI ACATGT 1 cut(s) 3909
PciSI GCTCTTC 1 cut(s) 1580
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 2 cut(s) 2594, 2920
PdmI GAANNNNTTC 3 cut(s) 3676, 3745, 4001
PfeI GAWTC 6 cut(s) 423, 1323, 1907, 2369, 2804, 4188
Pfl23II CGTACG 1 cut(s) 1227
PflMI CCANNNNNTGG 1 cut(s) 899
PfoI TCCNGGA 3 cut(s) 622, 2932, 3247
PinAI ACCGGT 1 cut(s) 4027
PleI GAGTC 1 cut(s) 472
PmaCI CACGTG 1 cut(s) 1289
PmlI CACGTG 1 cut(s) 1289
PpsI GAGTC 1 cut(s) 472
Ppu21I YACGTR 1 cut(s) 1289
PpuMI RGGWCCY 2 cut(s) 3427, 4279
PscI ACATGT 1 cut(s) 3909
PshAI GACNNNNGTC 1 cut(s) 98
Psp124BI GAGCTC 3 cut(s) 62, 177, 1575
Psp5II RGGWCCY 2 cut(s) 3427, 4279
Psp6I CCWGG 8 cut(s) 622, 898, 1386, 1705, 2822, 2932, 3247, 3415
PspCI CACGTG 1 cut(s) 1289
PspEI GGTNACC 2 cut(s) 1879, 4151
PspFI CCCAGC 1 cut(s) 2174
PspGI CCWGG 8 cut(s) 622, 898, 1386, 1705, 2822, 2932, 3247, 3415
PspLI CGTACG 1 cut(s) 1227
PspN4I GGNNCC 6 cut(s) 463, 1284, 1462, 1604, 3421, 4280
PspOMI GGGCCC 1 cut(s) 1282
PspPPI RGGWCCY 2 cut(s) 3427, 4279
PspXI VCTCGAGB 1 cut(s) 1301
PsrI GAACNNNNNNTAC 2 cut(s) 1403, 1435
PstI CTGCAG 2 cut(s) 2431, 3316
PstNI CAGNNNCTG 3 cut(s) 659, 899, 1439
PsuI RGATCY 3 cut(s) 676, 895, 4204
PvuII CAGCTG 1 cut(s) 3053
RsaI GTAC 9 cut(s) 732, 1229, 1631, 2234, 3070, 3524, 3564, 4094, 4319
RsaNI GTAC 9 cut(s) 731, 1228, 1630, 2233, 3069, 3523, 3563, 4093, 4318
RseI CAYNNNNRTG 5 cut(s) 777, 929, 1877, 3062, 3914
SacI GAGCTC 3 cut(s) 62, 177, 1575
SalI GTCGAC 3 cut(s) 91, 275, 4219
SapI GCTCTTC 1 cut(s) 1580
SchI GAGTC 1 cut(s) 472
SduI GDGCHC 6 cut(s) 62, 177, 472, 1286, 1575, 3407
SfaNI GCATC 7 cut(s) 20, 295, 439, 868, 898, 1825, 3031
SfcI CTRYAG 3 cut(s) 2427, 2982, 3312
Sfr274I CTCGAG 1 cut(s) 1301
SfuI TTCGAA 1 cut(s) 3141
SinI GGWCC 5 cut(s) 1082, 1384, 3197, 3427, 4279
SlaI CTCGAG 1 cut(s) 1301
SmiMI CAYNNNNRTG 5 cut(s) 777, 929, 1877, 3062, 3914
SmlI CTYRAG 9 cut(s) 176, 329, 971, 1301, 1375, 1687, 2132, 2908, 4214
SmoI CTYRAG 9 cut(s) 176, 329, 971, 1301, 1375, 1687, 2132, 2908, 4214
SpeI ACTAGT 1 cut(s) 850
SphI GCATGC 1 cut(s) 1587
SseBI AGGCCT 1 cut(s) 2229
SspI AATATT 3 cut(s) 2246, 3233, 4050
SstI GAGCTC 3 cut(s) 62, 177, 1575
StuI AGGCCT 1 cut(s) 2229
StyI CCWWGG 7 cut(s) 823, 2104, 2160, 2335, 2545, 3423, 3661
TaiI ACGT 9 cut(s) 129, 282, 820, 1229, 1291, 1767, 2833, 2847, 3600
TaqII GACCGA 1 cut(s) 3201
TatI WGTACW 3 cut(s) 1629, 2232, 3522
TauI GCSGC 4 cut(s) 8, 11, 188, 711
TfiI GAWTC 6 cut(s) 423, 1323, 1907, 2369, 2804, 4188
TscAI CASTG 6 cut(s) 1821, 1905, 2091, 2242, 2620, 3503
TseFI GTSAC 6 cut(s) 697, 1057, 1369, 1429, 1879, 4151
Tsp45I GTSAC 6 cut(s) 697, 1057, 1369, 1429, 1879, 4151
TspGWI ACGGA 1 cut(s) 2015
TspRI CASTG 6 cut(s) 1821, 1905, 2091, 2242, 2620, 3503
Van91I CCANNNNNTGG 1 cut(s) 899
Vha464I CTTAAG 2 cut(s) 1687, 4214
VpaK11BI GGWCC 5 cut(s) 1082, 1384, 3197, 3427, 4279
XagI CCTNNNNNAGG 1 cut(s) 627
XbaI TCTAGA 1 cut(s) 863
XceI RCATGY 4 cut(s) 232, 1523, 1587, 3913
XcmI CCANNNNNNNNNTGG 2 cut(s) 2461, 3013
XhoI CTCGAG 1 cut(s) 1301
XmaJI CCTAGG 2 cut(s) 823, 2104
XmiI GTMKAC 3 cut(s) 92, 276, 4220
XmnI GAANNNNTTC 3 cut(s) 3676, 3745, 4001
Zsp2I ATGCAT 2 cut(s) 913, 3766
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.