RLG00000034960

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
57652442 .. 57660514
8073 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034960

Sequence Viewer

Length: 4326 bp
ATGGCGGCTGCAGCATTGGCCGGAGAAGGCTTGGTGCGGTCTGGAAGTAGCATGAATTGGCGGGCAACAAGCATGAAAGAAATGTGGAATGATCAGCCAGATGCATTCCAGAGGAGTGAGAGGAAGCGGGAGGAGGAGGAGGAGCTGAGGTGGGCTGCAATAGAGCGGCTGCCCACTTATGACAGGTTGAAGAAGGGGATGTTGAGGCAGGTCATGAGCGATGGAAGGATAAGGCATGATGAGGTTGTTGTTACAAATCTTGGGGCAGATGATAAGAAGAAGTTGATGGATAGCATACTAAAGGTTGTTGAGGATGATAATGAGAAATTTCTCAGGAAGCTCAGGGACAGGACTGACAGGGTTGGAATCGAGATTCCAAAGATTGAAGTGAGATTCCAGGATTTATCAGTTGAGGGAGATGCATATGTTGGGACCAGAGCACTTCCAACTCTGTACAATTCCACCTTAAATGCAATAGAGGGAGTTCTTGGACTTTGTGGGCTCTCTGCATCGAAGAAAAGGGTAGTGAAGATACTTCAAGATGTGAGTGGAATAGTGAGACCAGCAAGAATGACTATACTTCTTGGACCTCCTGGCTCAGGAAAAACAACATTTCTAAAGGCACTTTCTGGAAAACTTGATGATGATTTAAGGGTAACGGGAAAAGTTACCTATTGTGGTTACGAGTTCTCTGAATTTGTTCCTCAGAGAACTAGTGCATATATTAGCCAGCATGATCTTCACTATGGTGAGATGACAGTACGCGAGACTCTTGATTTCTCCGGACGGTGCCTGGGAGTTGGAAGTCGGTATGAAATGCTGGCAGAAGCATCAAGGCGTGAGAAACAAGAAGGCATACGACCGGATCCTGAGATTGATGCATTCATGAAAGCCACAGCAGTGGCTGGCCAGAAAAGTAGTTTGATGACAGATTATGTTCTCAAGATACTTGGATTGGATATTTGTGCTGATACTATGGTGGGTGATGACATGAGGCGGGGCATCTCTGGAGGGCAGAAGAAGCGTGTAACTACTGGGGAAATGTTAGTTGGGCCAGCAAGAGCCTTTTTCATGGATGAAATATCAACAGGGTTGGATAGTTCCACCACATTTCAAATTGTCAAGTGCATGAGGCAGATGGCTCATATTATGGACATGACGATGATCATTTCTCTCCTGCAGCCTGCACCGGAGACATTTGACCTCTTTGATGACATTATCCTACTGTCAGAGGGTCAAATCGTCTATCAAGGTTCCCGTGAGAATGTTCTTGATTTTTTTGAACATATGGGCTTTAAATGCCCAAAAAGGAAAGGGGTTGCAGACTTTTTGCAAGAAGTAACTTCCAAGAAGGATCAAGAACAATACTGGTTTAAAAGGAATCAATCCTACAAATATATCTCCGTACCCGAGTTTGCTCAAACCTTCAACTCCTTTTATATTAGTCAAAGGCTTTCTGAAGAGCTAAGAGTCCCTTATGATAAGTCTAATACCCATCCAGGTGCTTTGGTGAGAGAAAAGTATGGAATCTCTAATTGGGAACTCTTCAAGGCATGCTTCTCAAGGGAATGGCTACTGATGAAGCGCAATTCATTTGTATACATATTCAAGACCACCCAGATAACAATCATGGCTGCAATTGCATTGACTGTGTTCTTAAGAACGGAAATGAAAGCTGGTCAAATACAAGATGCAGCAAAATTTTGGGGTGCATTGTTTTTCAGTCTCATCAATGTCATGTTTAATGGAATGGCAGAGCTTGCCATGACAGTTTTCAGGCTTCCTGTGTTCTATAAACAGAGAGATGCTTTGTTCTATCCCGGGTGGGCTTTTGGGCTGCCCCTTTGGATCCTCAGAATTCCCATTTCAGTAATGGAGTCAGGCATTTGGATCATTCTTAGTTATTACACCATTGGTTTTGCACCTGCTGCAAGTAGGTTTTTCAAACAATTCTTGGCTTTCTTTGGAGTGCATCAGATGGCTCTCTCCCTCTTCCGTTTCATTGCAGCTGTTGGAAGAACAGAAGTTGTTGCACAAACAATTGGAACCTTTACCTTGCTACTGGTCTTTGTGCTTGGAGGTTTTATAGTTGCCAAAGATCTATTAAGGCCTAGAGGAAGAAACTCCTTCATATTTCTATTGAAATTTATATCATTTTCTTGTGCACAGCCCATAACTGGTTCTAGCCAACCTACAGTTGGAAAGACCCTCCTTAAAGAAAGAGGACTGTTTGTAGATGAATATTGGTATTGGATTTGCATTGGAGCACTCCTTGGATATTCTCTTCTCTTTAACGTTCTTTTCATTGCAGCACTAACATTTTTGAAGCCATTTGGTGATTCTAAAGCGGTAATTTCAGACGACCTCTCTGATCTCAATACTAAAAAGCAGTTGACATCCAATTCAGAAGGCACTGATACTCCGGTGAGGAATACCAGAGGGACTACAAGCTCAAGCATGAGTTCTTCAAATACTGAATCTCGAAGAGGAATGGTGTTGCCCTTCCAGCCCCTTTCACTTGCTTTTGACCATGTTAACTACTATGTGGATATGCCTGCTGAAATGAAGAGTCAAGGGATTCAAGAGAGCAGATTACAACTGCTACGAGATGTCAGTGGTGCTTTCAGGCCAGGTGTCTTAACAGCTTTAGTAGGAGTCAGTGGTGCTGGAAAGACAACCTTGATGGATGTTTTATCAGGAAGGAAGACTGGTGGGTACATTGAGGGTAGTATAAGCATTTCTGGCTACCCAAAAAACCAAGCTACATTTGCTCGAGTTAGCGGTTATTGTGAACAAAATGACATCCATTCTCCTTATGTGACTGTCTATGAATCCCTTTTGTTTTCTGCATGGTTGCGTCTTGCTTCAGATGTAAAGAAGGAAACACGAAAGATGTTTGTTGAAGAAGTCATGGAACTAGTTGAGCTTAACCCACTGAGGAATGCTTTAGTCGGACTTCCAGGAGTAGATGGTCTTTCAACTGAACAGCGCAAGAGGCTCACAATAGCTGTAGAATTGGTAGCCAATCCCTCCATAATCTGTATGGATGAACCTACATCAGGCCTTGATGCTAGAGCCGCTGCAATTGTTATGCGTGCTGTAAGGAACACAGTAGATACTGGCCGAACTGTGGTGTGCACAATCCACCAACCAAGCATAGATATCTTTGAAGCTTTTGATGAGCTACTTTTGATGAAAAGAGGAGGAAAAGTTATTTATGCTGGACCCCTAGGTTCTCATTCTCACAAACTTGTTGAGTATTTTGAGAGTATTCCAGGGGTTCAAAAAATAAAAGACGGGTACAATCCTGCCACATGGATGTTAGAAATCAGCTCCACTGCAGTTGAGACTCAACTCCACATTGATTTTGCAGAAGTTTACGCCAATTCAGACCTCTATAGGAGAAATCAGGACCTCATCAGGCAGCTAAGCACTCCACAACCAGGTTCCAAGGATCTCTACTTCCCAACCCGCTACTCACAAAGTTTCTCAATTCAGTGCAAGGCTTGCTTCTGGAAACAACACTGGTCTTACTGGAGGAATTCGCACTTCAATGCAATCCGATTTTTCATGACAATTGTTATTGGTATCTTATTTGGTGTAATCTTTTGGGGAAAAGGAGACAAGATACACAAACAACAAGACTTGATTAACCTGTTGGGAGCAACTTATGCCGCTGTTCTTTTCCTCGGAGCCTCCAATGCTTCTGCAGTGCAATCTGTAGTGGCAACTGAGAGAACAGTATTCTATCGTGAACGGGCAGCAGGAATGTATTCCGAGTTGCCTTATGCCTTTGCTCAGGTGGCTATAGAAACAATTTATGTTGCAATACAGACCTTCATCTATACTCTTCTGCTATATTCCATGATTGGATACCAGTGGAAGGTGGTCAAGTTCCTGTATTTCTATTACTTCATATTCATGTGCTTCACGTACTTTTCAATGTACGGTATGATGGTGGTTGCGCTAACTCCTGGCCACCAGATTGCTGCCATTGTTATGTCTTTCTTCCTGAGCTTTTGGAACTTGTTTTCTGGTTTCCTCATCCCTAGACCGCTAATCCCAATATGGTGGAGGTGGTACTACTGGTGTTCCCCAGTCGCTTGGACAATCTATGGCATTTTCACATCTCAAGTTGGTGATTATAAGAGTTTACTCGAAATTCCGGGTGCAGCACCAAAGGCAGTTGATGCATTCCTTAAGGAGTATTTAGGCTATGACTATGACTTTCTTGTACCAGTAGTCCTTGCTCATGTTGGTTGGGTACTCATCTTCTTCTTTATATTTGCCTATGGTATCAAGTTCCTCAACTTCCAAAGGAGATAG

Protein Analysis

1442

Amino Acids

163.12

Weight (kDa)

8.83

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 104 - 153 2.5e-10 ABC-transporter N-terminal
ABC_tran PF00005 179 - 360 6.5e-14 ABC transporter
ABC2_membrane PF01061 515 - 704 3.6e-36 ABC-2 type transporter
PDR_assoc PF08370 726 - 785 4.5e-27 Plant PDR ABC transporter associated
ABC_tran PF00005 868 - 1020 3e-20 ABC transporter
ABC2_membrane PF01061 1166 - 1376 5.8e-55 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 4146
AarI CACCTGC 1 cut(s) 1933
Acc36I ACCTGC 2 cut(s) 199, 1933
AccB1I GGYRCC 1 cut(s) 789
AccBSI CCGCTC 1 cut(s) 166
AccI GTMKAC 1 cut(s) 1599
AccII CGCG 1 cut(s) 765
AccIII TCCGGA 1 cut(s) 782
AclI AACGTT 1 cut(s) 2295
AclWI GGATC 7 cut(s) 860, 873, 1362, 1843, 1856, 1898, 3462
AcoI YGGCCR 4 cut(s) 18, 907, 3121, 3976
AcsI RAATTY 7 cut(s) 326, 695, 1700, 1857, 2144, 3541, 4161
AcuI CTGAAG 2 cut(s) 1479, 2850
AfiI CCNNNNNNNGG 7 cut(s) 599, 2177, 2198, 3059, 3130, 3443, 3883
AflII CTTAAG 2 cut(s) 1657, 4199
AhlI ACTAGT 2 cut(s) 713, 2917
AjnI CCWGG 9 cut(s) 396, 592, 792, 1498, 2629, 2959, 3274, 3442, 3973
AjuI GAANNNNNNNTTGG 4 cut(s) 1032, 1064, 1519, 1551
AleI CACNNNNGTG 2 cut(s) 747, 899
Alw21I GWGCWC 4 cut(s) 442, 2167, 2269, 3140
Alw26I GTCTC 6 cut(s) 553, 761, 1187, 1730, 3341, 3615
Alw44I GTGCAC 2 cut(s) 2163, 3136
AlwI GGATC 7 cut(s) 860, 873, 1362, 1843, 1856, 1898, 3462
AlwNI CAGNNNCTG 1 cut(s) 905
Ama87I CYCGRG 3 cut(s) 1409, 1820, 2772
Aor13HI TCCGGA 1 cut(s) 782
AoxI GGCC 8 cut(s) 18, 907, 1052, 2108, 2627, 3061, 3121, 3976
ApaLI GTGCAC 2 cut(s) 2163, 3136
ApoI RAATTY 7 cut(s) 326, 695, 1700, 1857, 2144, 3541, 4161
Asp700I GAANNNNTTC 2 cut(s) 699, 3772
AspA2I CCTAGG 1 cut(s) 3229
AspLEI GCGC 3 cut(s) 1587, 2991, 3967
AspS9I GGNCC 5 cut(s) 432, 587, 1052, 3224, 3412
AsuC2I CCSGG 3 cut(s) 1821, 1822, 4167
AsuHPI GGTGA 6 cut(s) 761, 995, 1522, 2348, 2437, 4151
AvaI CYCGRG 3 cut(s) 1409, 1820, 2772
AvaII GGWCC 4 cut(s) 432, 587, 3224, 3412
AvrII CCTAGG 1 cut(s) 3229
BaeGI GKGCMC 2 cut(s) 2167, 3140
BaeI ACNNNNGTAYC 4 cut(s) 963, 996, 2409, 2442
BalI TGGCCA 2 cut(s) 909, 3978
BamHI GGATCC 2 cut(s) 865, 1848
BanI GGYRCC 1 cut(s) 789
BanII GRGCYC 1 cut(s) 504
BbsI GAAGAC 1 cut(s) 2711
Bbv12I GWGCWC 4 cut(s) 442, 2167, 2269, 3140
BbvCI CCTCAGC 1 cut(s) 146
BccI CCATC 8 cut(s) 215, 280, 1132, 1503, 1972, 2677, 2963, 3949
BciT130I CCWGG 9 cut(s) 398, 594, 794, 1500, 2631, 2961, 3276, 3444, 3975
BciVI GTATCC 1 cut(s) 3866
BclI TGATCA 2 cut(s) 91, 1164
BcnI CCSGG 3 cut(s) 1821, 1822, 4167
BcoDI GTCTC 6 cut(s) 553, 761, 1187, 1730, 3341, 3615
BcuI ACTAGT 2 cut(s) 713, 2917
BfaI CTAG 7 cut(s) 714, 2112, 2184, 2918, 3072, 3230, 4050
BfmI CTRYAG 9 cut(s) 9, 1178, 2193, 3009, 3339, 3397, 3708, 3720, 3807
BfrI CTTAAG 2 cut(s) 1657, 4199
BfuAI ACCTGC 2 cut(s) 199, 1933
BfuI GTATCC 1 cut(s) 3866
BglII AGATCT 1 cut(s) 2098
BlnI CCTAGG 1 cut(s) 3229
BlpI GCTNAGC 1 cut(s) 3428
Bme18I GGWCC 4 cut(s) 432, 587, 3224, 3412
BmeT110I CYCGRG 3 cut(s) 1409, 1820, 2772
BmgT120I GGNCC 5 cut(s) 432, 587, 1052, 3224, 3412
BmiI GGNNCC 9 cut(s) 433, 791, 867, 1255, 1850, 2047, 3226, 3448, 3694
BmrI ACTGGG 2 cut(s) 1044, 4091
BmuI ACTGGG 2 cut(s) 1044, 4091
BpiI GAAGAC 1 cut(s) 2711
BpmI CTGGAG 2 cut(s) 1029, 3556
Bpu10I CCTNAGC 5 cut(s) 146, 341, 598, 3798, 4013
Bpu1102I GCTNAGC 1 cut(s) 3428
BpuEI CTTGAG 4 cut(s) 926, 1546, 2437, 4116
BpuMI CCSGG 3 cut(s) 1821, 1822, 4167
BsaAI YACGTR 1 cut(s) 3933
BsaBI GATNNNNATC 1 cut(s) 1625
BsaI GGTCTC 1 cut(s) 553
BsaJI CCNNGG 7 cut(s) 793, 1820, 2272, 3229, 3275, 3450, 3688
BsaWI WCCGGW 4 cut(s) 782, 862, 1189, 2422
BsaXI ACNNNNNCTCC 6 cut(s) 134, 164, 2404, 2434, 3195, 3225
Bsc4I CCNNNNNNNGG 7 cut(s) 599, 2177, 2198, 3059, 3130, 3443, 3883
Bse3DI GCAATG 2 cut(s) 2001, 2304
Bse8I GATNNNNATC 1 cut(s) 1625
BseAI TCCGGA 1 cut(s) 782
BseBI CCWGG 9 cut(s) 398, 594, 794, 1500, 2631, 2961, 3276, 3444, 3975
BseDI CCNNGG 7 cut(s) 793, 1820, 2272, 3229, 3275, 3450, 3688
BseJI GATNNNNATC 1 cut(s) 1625
BseLI CCNNNNNNNGG 7 cut(s) 599, 2177, 2198, 3059, 3130, 3443, 3883
BseMI GCAATG 2 cut(s) 2001, 2304
BseRI GAGGAG 6 cut(s) 127, 146, 149, 152, 155, 3216
BseSI GKGCMC 2 cut(s) 2167, 3140
BsgI GTGCAG 2 cut(s) 1170, 4191
Bsh1236I CGCG 1 cut(s) 765
Bsh1285I CGRYCG 1 cut(s) 863
BshFI GGCC 8 cut(s) 20, 909, 1054, 2110, 2629, 3063, 3123, 3978
BshNI GGYRCC 1 cut(s) 789
BsiEI CGRYCG 1 cut(s) 863
BsiHKAI GWGCWC 4 cut(s) 442, 2167, 2269, 3140
BsiHKCI CYCGRG 3 cut(s) 1409, 1820, 2772
BsiSI CCGG 7 cut(s) 21, 783, 863, 1190, 1821, 2423, 4166
BslFI GGGAC 4 cut(s) 359, 445, 1457, 2455
BslI CCNNNNNNNGG 7 cut(s) 599, 2177, 2198, 3059, 3130, 3443, 3883
BsmAI GTCTC 6 cut(s) 553, 761, 1187, 1730, 3341, 3615
BsmFI GGGAC 4 cut(s) 359, 445, 1457, 2455
BsmI GAATGC 4 cut(s) 104, 881, 2947, 4193
BsnI GGCC 8 cut(s) 20, 909, 1054, 2110, 2629, 3063, 3123, 3978
Bso31I GGTCTC 1 cut(s) 553
BsoBI CYCGRG 3 cut(s) 1409, 1820, 2772
Bsp1286I GDGCHC 5 cut(s) 442, 504, 2167, 2269, 3140
Bsp13I TCCGGA 1 cut(s) 782
Bsp1407I TGTACA 1 cut(s) 453
Bsp1720I GCTNAGC 1 cut(s) 3428
BspANI GGCC 8 cut(s) 20, 909, 1054, 2110, 2629, 3063, 3123, 3978
BspEI TCCGGA 1 cut(s) 782
BspFNI CGCG 1 cut(s) 765
BspHI TCATGA 3 cut(s) 213, 885, 3570
BspLI GGNNCC 9 cut(s) 433, 791, 867, 1255, 1850, 2047, 3226, 3448, 3694
BspMAI CTGCAG 4 cut(s) 13, 1182, 3343, 3712
BspMI ACCTGC 2 cut(s) 199, 1933
BspPI GGATC 7 cut(s) 860, 873, 1362, 1843, 1856, 1898, 3462
BspQI GCTCTTC 1 cut(s) 1455
BspT107I GGYRCC 1 cut(s) 789
BspTI CTTAAG 2 cut(s) 1657, 4199
BspTNI GGTCTC 1 cut(s) 553
BsrBI CCGCTC 1 cut(s) 166
BsrDI GCAATG 2 cut(s) 2001, 2304
BsrGI TGTACA 1 cut(s) 453
BssECI CCNNGG 7 cut(s) 793, 1820, 2272, 3229, 3275, 3450, 3688
BssNAI GTATAC 1 cut(s) 1600
BssT1I CCWWGG 3 cut(s) 2272, 3229, 3450
Bst1107I GTATAC 1 cut(s) 1600
Bst2UI CCWGG 9 cut(s) 398, 594, 794, 1500, 2631, 2961, 3276, 3444, 3975
Bst6I CTCTTC 7 cut(s) 1455, 1550, 1997, 2289, 2479, 2561, 3855
BstAFI CTTAAG 2 cut(s) 1657, 4199
BstAPI GCANNNNNTGC 5 cut(s) 1760, 1928, 3507, 3671, 4190
BstAUI TGTACA 1 cut(s) 453
BstBAI YACGTR 1 cut(s) 3933
BstENI CCTNNNNNAGG 2 cut(s) 597, 3057
BstFNI CGCG 1 cut(s) 765
BstHHI GCGC 3 cut(s) 1587, 2991, 3967
BstMAI GTCTC 6 cut(s) 553, 761, 1187, 1730, 3341, 3615
BstMCI CGRYCG 1 cut(s) 863
BstNI CCWGG 9 cut(s) 398, 594, 794, 1500, 2631, 2961, 3276, 3444, 3975
BstNSI RCATGY 1 cut(s) 1557
BstSFI CTRYAG 9 cut(s) 9, 1178, 2193, 3009, 3339, 3397, 3708, 3720, 3807
BstSLI GKGCMC 2 cut(s) 2167, 3140
BstUI CGCG 1 cut(s) 765
BstV2I GAAGAC 1 cut(s) 2711
BstX2I RGATCY 4 cut(s) 865, 1848, 2098, 3454
BstXI CCANNNNNNTGG 3 cut(s) 901, 4071, 4104
BstYI RGATCY 4 cut(s) 865, 1848, 2098, 3454
BstZ17I GTATAC 1 cut(s) 1600
BsuI GTATCC 1 cut(s) 3866
BsuRI GGCC 8 cut(s) 20, 909, 1054, 2110, 2629, 3063, 3123, 3978
BtgZI GCGATG 1 cut(s) 234
BtsI GCAGTG 3 cut(s) 906, 3336, 3717
BveI ACCTGC 2 cut(s) 199, 1933
CaiI CAGNNNCTG 1 cut(s) 905
CciI TCATGA 3 cut(s) 213, 885, 3570
CfoI GCGC 3 cut(s) 1587, 2991, 3967
Cfr13I GGNCC 5 cut(s) 432, 587, 1052, 3224, 3412
Cfr9I CCCGGG 1 cut(s) 1820
CseI GACGC 1 cut(s) 2846
CsiI ACCWGGT 1 cut(s) 3442
CspCI CAANNNNNGTGG 2 cut(s) 3325, 3360
DraI TTTAAA 2 cut(s) 1297, 1375
EaeI YGGCCR 4 cut(s) 18, 907, 3121, 3976
Eam1104I CTCTTC 7 cut(s) 1455, 1550, 1997, 2289, 2479, 2561, 3855
EarI CTCTTC 7 cut(s) 1455, 1550, 1997, 2289, 2479, 2561, 3855
Eco130I CCWWGG 3 cut(s) 2272, 3229, 3450
Eco147I AGGCCT 2 cut(s) 2110, 3063
Eco24I GRGCYC 1 cut(s) 504
Eco31I GGTCTC 1 cut(s) 553
Eco32I GATATC 1 cut(s) 3163
Eco47I GGWCC 4 cut(s) 432, 587, 3224, 3412
Eco57I CTGAAG 2 cut(s) 1479, 2850
Eco88I CYCGRG 3 cut(s) 1409, 1820, 2772
EcoNI CCTNNNNNAGG 2 cut(s) 597, 3057
EcoO109I RGGNCCY 1 cut(s) 3412
EcoRI GAATTC 2 cut(s) 1857, 3541
EcoRII CCWGG 9 cut(s) 396, 592, 792, 1498, 2629, 2959, 3274, 3442, 3973
EcoRV GATATC 1 cut(s) 3163
EcoT14I CCWWGG 3 cut(s) 2272, 3229, 3450
EcoT22I ATGCAT 4 cut(s) 106, 424, 883, 4195
EcoT38I GRGCYC 1 cut(s) 504
ErhI CCWWGG 3 cut(s) 2272, 3229, 3450
FalI AAGNNNNNCTT 8 cut(s) 1459, 1491, 1541, 1573, 2663, 2695, 3494, 3526
FaqI GGGAC 4 cut(s) 359, 445, 1457, 2455
FauI CCCGC 4 cut(s) 54, 120, 990, 3479
FauNDI CATATG 2 cut(s) 424, 1287
FbaI TGATCA 2 cut(s) 91, 1164
FblI GTMKAC 1 cut(s) 1599
FriOI GRGCYC 1 cut(s) 504
FspBI CTAG 7 cut(s) 714, 2112, 2184, 2918, 3072, 3230, 4050
GlaI GCGC 3 cut(s) 1586, 2990, 3966
GsuI CTGGAG 2 cut(s) 1029, 3556
HaeIII GGCC 8 cut(s) 20, 909, 1054, 2110, 2629, 3063, 3123, 3978
HapII CCGG 7 cut(s) 21, 783, 863, 1190, 1821, 2423, 4166
HgaI GACGC 1 cut(s) 2846
HhaI GCGC 3 cut(s) 1587, 2991, 3967
Hin6I GCGC 3 cut(s) 1585, 2989, 3965
HinP1I GCGC 3 cut(s) 1585, 2989, 3965
HincII GTYRAC 2 cut(s) 2394, 2536
HindII GTYRAC 2 cut(s) 2394, 2536
HindIII AAGCTT 1 cut(s) 3171
HpaI GTTAAC 1 cut(s) 2536
HpaII CCGG 7 cut(s) 21, 783, 863, 1190, 1821, 2423, 4166
HphI GGTGA 6 cut(s) 761, 995, 1522, 2348, 2437, 4151
Hpy166II GTNNAC 9 cut(s) 1600, 2165, 2394, 2536, 2792, 3138, 3379, 3755, 4154
Hpy8I GTNNAC 9 cut(s) 1600, 2165, 2394, 2536, 2792, 3138, 3379, 3755, 4154
HpyCH4IV ACGT 2 cut(s) 2295, 3932
HpySE526I ACGT 2 cut(s) 2295, 3932
HspAI GCGC 3 cut(s) 1585, 2989, 3965
Kpn2I TCCGGA 1 cut(s) 782
Ksp22I TGATCA 2 cut(s) 91, 1164
KspAI GTTAAC 1 cut(s) 2536
LguI GCTCTTC 1 cut(s) 1455
LmnI GCTCC 5 cut(s) 142, 2264, 3338, 3662, 3692
MabI ACCWGGT 1 cut(s) 3442
MaeI CTAG 7 cut(s) 714, 2112, 2184, 2918, 3072, 3230, 4050
MaeII ACGT 2 cut(s) 2295, 3932
MaeIII GTNAC 7 cut(s) 250, 655, 667, 680, 1027, 1339, 2818
MbiI CCGCTC 1 cut(s) 166
MfeI CAATTG 4 cut(s) 1638, 2040, 3084, 3576
MflI RGATCY 4 cut(s) 865, 1848, 2098, 3454
MhlI GDGCHC 5 cut(s) 442, 504, 2167, 2269, 3140
MlsI TGGCCA 2 cut(s) 909, 3978
MluNI TGGCCA 2 cut(s) 909, 3978
MlyI GAGTC 6 cut(s) 763, 1479, 1886, 2578, 2664, 3343
MmeI TCCRAC 7 cut(s) 343, 470, 781, 1074, 1993, 2179, 2932
Mox20I TGGCCA 2 cut(s) 909, 3978
Mph1103I ATGCAT 4 cut(s) 106, 424, 883, 4195
MroI TCCGGA 1 cut(s) 782
MroXI GAANNNNTTC 2 cut(s) 699, 3772
MscI TGGCCA 2 cut(s) 909, 3978
MslI CAYNNNNRTG 8 cut(s) 747, 899, 1160, 1500, 3317, 3552, 3920, 3998
Msp20I TGGCCA 2 cut(s) 909, 3978
MspA1I CMGCKG 3 cut(s) 2009, 3080, 3677
MspCI CTTAAG 2 cut(s) 1657, 4199
MspI CCGG 7 cut(s) 21, 783, 863, 1190, 1821, 2423, 4166
MunI CAATTG 4 cut(s) 1638, 2040, 3084, 3576
Mva1269I GAATGC 4 cut(s) 104, 881, 2947, 4193
MvaI CCWGG 9 cut(s) 398, 594, 794, 1500, 2631, 2961, 3276, 3444, 3975
MvnI CGCG 1 cut(s) 765
NciI CCSGG 3 cut(s) 1821, 1822, 4167
NdeI CATATG 2 cut(s) 424, 1287
NlaIV GGNNCC 9 cut(s) 433, 791, 867, 1255, 1850, 2047, 3226, 3448, 3694
NmuCI GTSAC 1 cut(s) 2818
NsiI ATGCAT 4 cut(s) 106, 424, 883, 4195
NspI RCATGY 1 cut(s) 1557
OliI CACNNNNGTG 2 cut(s) 747, 899
PaeI GCATGC 1 cut(s) 1557
PaeR7I CTCGAG 1 cut(s) 2772
PagI TCATGA 3 cut(s) 213, 885, 3570
PaqCI CACCTGC 1 cut(s) 1933
PceI AGGCCT 2 cut(s) 2110, 3063
PciSI GCTCTTC 1 cut(s) 1455
PctI GAATGC 4 cut(s) 104, 881, 2947, 4193
PdmI GAANNNNTTC 2 cut(s) 699, 3772
PfeI GAWTC 9 cut(s) 366, 373, 393, 1381, 1527, 2339, 2477, 2578, 2831
PfoI TCCNGGA 2 cut(s) 396, 2959
PleI GAGTC 6 cut(s) 763, 1478, 1885, 2577, 2663, 3343
PpsI GAGTC 6 cut(s) 763, 1478, 1885, 2577, 2663, 3343
Ppu21I YACGTR 1 cut(s) 3933
PpuMI RGGWCCY 1 cut(s) 3412
PsiI TTATAA 1 cut(s) 4146
Psp1406I AACGTT 1 cut(s) 2295
Psp5II RGGWCCY 1 cut(s) 3412
Psp6I CCWGG 9 cut(s) 396, 592, 792, 1498, 2629, 2959, 3274, 3442, 3973
PspGI CCWGG 9 cut(s) 396, 592, 792, 1498, 2629, 2959, 3274, 3442, 3973
PspN4I GGNNCC 9 cut(s) 433, 791, 867, 1255, 1850, 2047, 3226, 3448, 3694
PspPI GGNCC 5 cut(s) 432, 587, 1052, 3224, 3412
PspPPI RGGWCCY 1 cut(s) 3412
PspXI VCTCGAGB 1 cut(s) 2772
PstI CTGCAG 4 cut(s) 13, 1182, 3343, 3712
PstNI CAGNNNCTG 1 cut(s) 905
PsuI RGATCY 4 cut(s) 865, 1848, 2098, 3454
PvuII CAGCTG 1 cut(s) 2009
RseI CAYNNNNRTG 8 cut(s) 747, 899, 1160, 1500, 3317, 3552, 3920, 3998
SapI GCTCTTC 1 cut(s) 1455
Sau96I GGNCC 5 cut(s) 432, 587, 1052, 3224, 3412
SchI GAGTC 6 cut(s) 763, 1479, 1886, 2578, 2664, 3343
SduI GDGCHC 5 cut(s) 442, 504, 2167, 2269, 3140
SexAI ACCWGGT 1 cut(s) 3442
SfcI CTRYAG 9 cut(s) 9, 1178, 2193, 3009, 3339, 3397, 3708, 3720, 3807
Sfr274I CTCGAG 1 cut(s) 2772
SinI GGWCC 4 cut(s) 432, 587, 3224, 3412
SlaI CTCGAG 1 cut(s) 2772
SmaI CCCGGG 1 cut(s) 1822
SmiMI CAYNNNNRTG 8 cut(s) 747, 899, 1160, 1500, 3317, 3552, 3920, 3998
SmlI CTYRAG 7 cut(s) 941, 1561, 1657, 2452, 2772, 4131, 4199
SmoI CTYRAG 7 cut(s) 941, 1561, 1657, 2452, 2772, 4131, 4199
SpeI ACTAGT 2 cut(s) 713, 2917
SphI GCATGC 1 cut(s) 1557
SseBI AGGCCT 2 cut(s) 2110, 3063
SspI AATATT 1 cut(s) 2243
SspMI CTAG 7 cut(s) 714, 2112, 2184, 2918, 3072, 3230, 4050
StuI AGGCCT 2 cut(s) 2110, 3063
StyI CCWWGG 3 cut(s) 2272, 3229, 3450
TaiI ACGT 2 cut(s) 2298, 3935
TaqI TCGA 5 cut(s) 369, 512, 2482, 2773, 4158
TatI WGTACW 1 cut(s) 453
TauI GCSGC 4 cut(s) 8, 169, 3080, 3677
TfiI GAWTC 9 cut(s) 366, 373, 393, 1381, 1527, 2339, 2477, 2578, 2831
TseFI GTSAC 1 cut(s) 2818
Tsp45I GTSAC 1 cut(s) 2818
TspGWI ACGGA 3 cut(s) 1393, 1679, 1985
TspMI CCCGGG 1 cut(s) 1820
Vha464I CTTAAG 2 cut(s) 1657, 4199
VneI GTGCAC 2 cut(s) 2163, 3136
VpaK11BI GGWCC 4 cut(s) 432, 587, 3224, 3412
XagI CCTNNNNNAGG 2 cut(s) 597, 3057
XapI RAATTY 7 cut(s) 326, 695, 1700, 1857, 2144, 3541, 4161
XceI RCATGY 1 cut(s) 1557
XcmI CCANNNNNNNNNTGG 3 cut(s) 1870, 2195, 3040
XhoI CTCGAG 1 cut(s) 2772
XmaI CCCGGG 1 cut(s) 1820
XmaJI CCTAGG 1 cut(s) 3229
XmiI GTMKAC 1 cut(s) 1599
XmnI GAANNNNTTC 2 cut(s) 699, 3772
XspI CTAG 7 cut(s) 714, 2112, 2184, 2918, 3072, 3230, 4050
Zsp2I ATGCAT 4 cut(s) 106, 424, 883, 4195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.