Rmu_sc0001694.1_g000030

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001694.1
Physical Location & Seq
Forward (+)
179891 .. 186795
6905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001694.1_g000030.1.cds

Sequence Viewer

Length: 4278 bp
atggcggcggcaatggcgggagaagacttaatgaggcagtcgagtagccggaggagctggcggtcgacgagtgtccgagaaatgtggaacgcgccggacgtgttccagcggagcgtccggcagccggcgctggacgaggaggaggagctcaagtgggcggccatagagcggttgccgacttatgataggatgaggagaggcatgttgaggaatgtgatgagcaatggaagggttgtggctgaagaagttgacgttgcgcatcttggggatcaagataagaagcagttgatggaaaacatacttaaggttattgaggaggacaacgagaagttcttgaagaagctcagggccagaaacgacagggttggtattgatattcctaaagttgaggttagattccagaatttatcaattgagggagatgcgtttgtaggcaccagagcacttccgactctgtggaattccaccttgaacgcagtcgagggaatactgggacttgttggactttcaccatcgaagaaaagagttgtaaagatactacaagatgttagtggtattatcaaaccagcaaggatgacacttcttcttgggcctccgggatcaggaaaaacaacattgctaaaagcagtttctggcaaactagatagggatcttagggtaaatgggaaagtgacttactgcggccatgaatttaatgaatttgtacctcagagaacctctgcttatattagccagcatgatcttcattatggtgagatgacagttcgtgaaacctttgatttctctggacgttgcctaggagttggaacaaggtatgatatactagcagagttgtctagacgggagaaagatgcaggtatcaaaccagatcctgcgattgatgcatacatgaaagccacatctgtggcaggccaggaagcaagtttgatcacagattatgtcctcaagatacttggattagacatctgtgctgatattatggtgggtgatgacatgagaaggggaatatccggtggacaaaagaagcgtgtcacgactggagaaatgttggttggaccagcaaaagcatttttcatggatgaaatatcaacggggttggacagttccacaacctttcagattatcaaatacatgagacagatggttcacattatggatgtgtcaatggtcatctctctcttgcagcctgcacctgagacgtacgatctttttgatgatattatccttctttccgagggtcagattgtttatcaaggcccacgtgagaatgtcctcgagttctttgaatatatgggattcaaatgccctgacagaaaaggtgttgcagacttcttgcaagaagtgacctcaaggaaggaccaggaacaatactgctccttccatgttggccaacggcttggggaagaactaagagttccttatgataaaagacatgcccatcctgctgctttggtcaaggaaaagtatggaatatccaatatggagctcttcaaagcatgctttgcaaggggatggctcctaatgaagcggaactcttttgtgtacatattcaaaactacacagattgccatcatggctacaattgctttgaccgtattcttaagaacagaaatgaaacctggggcactagatggttcagcaaagtattggggggcaatgtttttcagtctcattaacgtcatgtttaatggagtggcagagcttgcaatgacagttttccggcttccagtgttctttaaacagagggatgccttgttctatccagcgtgggcttttgccttgcccatttgggtgaccagaattcctgtttcagtgttggaatctttgatatggattatttttacctattacaccataggatttgcacctgatcctagtaggttcttcaaacagttactggctttcattggtataagtcagatggcactctccctcttccgtttcattgcagcgcttggaagatcagatgtggttgctaacacaattggttcatttacactgctattggtatttatcctaggaggttatattgttgctaaagatgacatccagtcatggatgatttggggctactatgtctcacctatgatgtatggacaaaatgcaattgctattaatgaatttcttgataaaagatggggcggcgctccccctatctcctccactcagcctactctcggaaaagcccttctcagagaaagaggcctgtacactgaagaatattggtattggatttgtgttggagcgctttttgggttttcttttcttttcaatgggctgttcattgcagcactcacctacttgaacccccttggcgacaacaaaggtctgattgtggaggatgattctgaaaccaagaggaggccacaattgacagaaggtattgatatgcaagtgagaactgcagaaggaacttcaaatggacaagccaagcgaggaatggtgttgcccttccagcccctttcactcgctttcagccatgtgaactactatgtggatatgcctgcggagatgaagacccaaggtattgaagagaaccgactgcaactactaagagatgttaatggggcattcaggcctggagttctcactgcattagttggtgttagcggtgctggaaaaactactttgatggatgtcttggctggaagaaagactggtggatatatagaaggaagtattagtatctcaggttatccaaaaaaccaagccacatttgctcgggttagcggttattgtgaacagaacgacattcattcaccatatgttactgtttatgaatctctgctatactctgcctggctacgtctttctaaggatgttgacaaaagcaaacgaaagatgtttgttgatgaagttatggacttggtggagcttaaccccttgaggaatgctttagttggacttccaggagttgatggactttcaactgaacaaagaaagaggctgaccattgctgtagaattggttgcaaatccttccattatctttatggatgagccaacatcagggcttgatgctagagcagctgccattgttatgcgtactgtaagaaacaccgtcgatactggacgaactgttgtttgcaccattcaccaacctagcattgacattttcgaagcttttgatgagcttttcttaatgaaaagaggaggacaagtgatttatgctggacctcttggtgatcggtctcacaaacttgttgaatattttgaggccattccaggagttcccaagataaaagacggctacaaccctgctacatggatgttagaggtcagctctgctgcagttgaggctcaaaataacgttgattttgccgaaatatatgcaaactctgagctgtataggagcgttcaagaacttatcaaggaattgagtacaccactcccaggctccaaggacctttacttccccacccaatactcgcaaagcttcccaactcaatgcaaggcttgcttttggaaacaacactggtcatactggaggaattcgcagtacaatgccatcaggtttttcaacacaatagtcatcggcgtactttttggcgtcatcttctggaagaagggaaacgtgttagagaaacaacaagatattattaaccttctgggagcaacctattctgctgttcttttccttggagcgggaaatgcttctgctgtgcaatctgtggttgcgattgagagaacagttttctaccgagaaagagcagcaggaatgtattcagagttgccttatgcatttgctcaggtggccattgagacgatttatgttgctatacaaacattcatttattcccttcttctatttaccatgatcggctatgaatttaaagttgagaaatttttgtatttctactactttatattcatgtgttttacatacatgtcaatgtatggaatgatggtggttgccctaactcccggccatcaaatcgctgcaattgtcatgtccttcttcatgagtttctggaatttgttctccggtttcctcctcgctagaccgctactcccgatatggtggaggtggtactactggggttctccaattgcttggacaatttacggtgtccaagcatctcaattcggtgaccggacggataagtttgtccaactttctgatggaagctcagaaagattagatctattcctcaagaagaattggggttatgaccacgacttcctcataccagttgtcgtttctcatgttggttgggtcctcctcttcttctttgtctttgcttatggtatcaagtaccttaacttccagaggagatga

Protein Analysis

1425

Amino Acids

161.23

Weight (kDa)

8.13

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 258
Acc36I ACCTGC 1 cut(s) 845
AccB1I GGYRCC 1 cut(s) 434
AccBSI CCGCTC 2 cut(s) 169, 3644
AccI GTMKAC 1 cut(s) 65
AccII CGCG 1 cut(s) 92
AclI AACGTT 1 cut(s) 3309
AclWI GGATC 5 cut(s) 276, 607, 657, 863, 1865
AcoI YGGCCR 5 cut(s) 159, 682, 1387, 3753, 3925
AcuI CTGAAG 2 cut(s) 261, 2235
AcvI CACGTG 1 cut(s) 1262
AcyI GRCGYC 1 cut(s) 3549
AfeI AGCGCT 2 cut(s) 1953, 2247
AfiI CCNNNNNNNGG 8 cut(s) 124, 168, 602, 2177, 2361, 3008, 3392, 3643
AflII CTTAAG 2 cut(s) 302, 1600
AflIII ACRYGT 3 cut(s) 99, 3573, 3885
AhdI GACNNNNNGTC 1 cut(s) 2050
AjiI CACGTC 1 cut(s) 100
AjnI CCWGG 8 cut(s) 912, 1359, 1618, 2578, 2798, 2908, 3223, 3391
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AleI CACNNNNGTG 1 cut(s) 902
AloI GAACNNNNNNTCC 2 cut(s) 1739, 1771
Alw21I GWGCWC 3 cut(s) 150, 445, 1488
Alw26I GTCTC 6 cut(s) 1129, 1190, 1673, 2083, 3195, 3755
AlwI GGATC 5 cut(s) 276, 607, 657, 863, 1865
AlwNI CAGNNNCTG 3 cut(s) 632, 872, 1897
Ama87I CYCGRG 2 cut(s) 1274, 2721
Aor51HI AGCGCT 2 cut(s) 1953, 2247
AseI ATTAAT 1 cut(s) 2115
Asp700I GAANNNNTTC 3 cut(s) 3652, 3721, 3977
AspA2I CCTAGG 2 cut(s) 796, 2017
AspLEI GCGC 6 cut(s) 94, 130, 259, 1954, 2147, 2248
AspS9I GGNCC 8 cut(s) 348, 590, 1055, 1256, 1357, 3173, 3403, 4216
AsuC2I CCSGG 2 cut(s) 597, 3924
AsuII TTCGAA 1 cut(s) 3117
AvaI CYCGRG 2 cut(s) 1274, 2721
AvaII GGWCC 5 cut(s) 1055, 1357, 3173, 3403, 4216
AvrII CCTAGG 2 cut(s) 796, 2017
BaeGI GKGCMC 1 cut(s) 1627
BalI TGGCCA 2 cut(s) 1389, 3755
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 2 cut(s) 150, 1488
BarI GAAGNNNNNNTAC 1 cut(s) 4247
BbrPI CACGTG 1 cut(s) 1262
BbsI GAAGAC 2 cut(s) 30, 2522
Bbv12I GWGCWC 3 cut(s) 150, 445, 1488
BceAI ACGGC 2 cut(s) 1409, 3262
BcgI CGANNNNNNTGC 2 cut(s) 3311, 3345
BciT130I CCWGG 8 cut(s) 914, 1361, 1620, 2580, 2800, 2910, 3225, 3393
BclI TGATCA 1 cut(s) 927
BcnI CCSGG 2 cut(s) 597, 3924
BcoDI GTCTC 6 cut(s) 1129, 1190, 1673, 2083, 3195, 3755
BfmI CTRYAG 3 cut(s) 2403, 2958, 3288
BfoI RGCGCY 4 cut(s) 131, 1955, 2148, 2249
BfrI CTTAAG 2 cut(s) 302, 1600
BfuAI ACCTGC 1 cut(s) 845
BglI GCCNNNNNGGC 1 cut(s) 1574
BglII AGATCT 1 cut(s) 4141
BlnI CCTAGG 2 cut(s) 796, 2017
Bme18I GGWCC 5 cut(s) 1055, 1357, 3173, 3403, 4216
BmeRI GACNNNNNGTC 1 cut(s) 2050
BmeT110I CYCGRG 2 cut(s) 1274, 2721
BmgBI CACGTC 1 cut(s) 100
BmgT120I GGNCC 8 cut(s) 348, 590, 1055, 1256, 1357, 3173, 3403, 4216
BmiI GGNNCC 4 cut(s) 436, 1517, 3397, 4217
BmrI ACTGGG 2 cut(s) 500, 4045
BmsI GCATC 7 cut(s) 268, 412, 841, 871, 1738, 3007, 4085
BmuI ACTGGG 2 cut(s) 500, 4045
BoxI GACNNNNGTC 1 cut(s) 71
BpiI GAAGAC 2 cut(s) 30, 2522
BplI GAGNNNNNCTC 2 cut(s) 3266, 3298
BpmI CTGGAG 3 cut(s) 1059, 2601, 3505
Bpu10I CCTNAGC 2 cut(s) 344, 3747
Bpu14I TTCGAA 1 cut(s) 3117
BpuEI CTTGAG 5 cut(s) 134, 929, 1333, 2905, 4136
BpuMI CCSGG 2 cut(s) 597, 3924
BsaAI YACGTR 1 cut(s) 1262
BsaBI GATNNNNATC 2 cut(s) 648, 1568
BsaHI GRCGYC 1 cut(s) 3549
BsaI GGTCTC 1 cut(s) 3195
BsaJI CCNNGG 9 cut(s) 796, 1233, 1619, 2017, 2311, 2521, 3391, 3399, 3637
BsaWI WCCGGW 3 cut(s) 1010, 3983, 4092
BsaXI ACNNNNNCTCC 6 cut(s) 137, 167, 3144, 3174, 3993, 4023
Bsc4I CCNNNNNNNGG 8 cut(s) 124, 168, 602, 2177, 2361, 3008, 3392, 3643
Bse118I RCCGGY 1 cut(s) 124
Bse3DI GCAATG 8 cut(s) 18, 229, 614, 1662, 1713, 1944, 2283, 2952
Bse8I GATNNNNATC 2 cut(s) 648, 1568
BseBI CCWGG 8 cut(s) 914, 1361, 1620, 2580, 2800, 2910, 3225, 3393
BseDI CCNNGG 9 cut(s) 796, 1233, 1619, 2017, 2311, 2521, 3391, 3399, 3637
BseJI GATNNNNATC 2 cut(s) 648, 1568
BseLI CCNNNNNNNGG 8 cut(s) 124, 168, 602, 2177, 2361, 3008, 3392, 3643
BseMI GCAATG 8 cut(s) 18, 229, 614, 1662, 1713, 1944, 2283, 2952
BseMII CTCAG 9 cut(s) 358, 722, 1185, 2180, 2206, 2703, 3330, 3761, 4143
BseSI GKGCMC 1 cut(s) 1627
BsgI GTGCAG 1 cut(s) 1173
Bsh1236I CGCG 1 cut(s) 92
Bsh1285I CGRYCG 1 cut(s) 65
BshNI GGYRCC 1 cut(s) 434
BsiEI CGRYCG 1 cut(s) 65
BsiHKAI GWGCWC 3 cut(s) 150, 445, 1488
BsiHKCI CYCGRG 2 cut(s) 1274, 2721
BsiWI CGTACG 1 cut(s) 1200
BslFI GGGAC 1 cut(s) 507
BslI CCNNNNNNNGG 8 cut(s) 124, 168, 602, 2177, 2361, 3008, 3392, 3643
BsmAI GTCTC 6 cut(s) 1129, 1190, 1673, 2083, 3195, 3755
BsmBI CGTCTC 2 cut(s) 1190, 3755
BsmFI GGGAC 1 cut(s) 507
BsmI GAATGC 2 cut(s) 2570, 2896
Bso31I GGTCTC 1 cut(s) 3195
BsoBI CYCGRG 2 cut(s) 1274, 2721
Bsp119I TTCGAA 1 cut(s) 3117
Bsp1286I GDGCHC 4 cut(s) 150, 445, 1488, 1627
Bsp1407I TGTACA 2 cut(s) 1542, 2208
BspCNI CTCAG 9 cut(s) 357, 721, 1186, 2179, 2205, 2702, 3331, 3760, 4142
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 1 cut(s) 3960
BspLI GGNNCC 4 cut(s) 436, 1517, 3397, 4217
BspMAI CTGCAG 2 cut(s) 2407, 3292
BspMI ACCTGC 1 cut(s) 845
BspPI GGATC 5 cut(s) 276, 607, 657, 863, 1865
BspQI GCTCTTC 1 cut(s) 1493
BspT104I TTCGAA 1 cut(s) 3117
BspT107I GGYRCC 1 cut(s) 434
BspTI CTTAAG 2 cut(s) 302, 1600
BspTNI GGTCTC 1 cut(s) 3195
BsrBI CCGCTC 2 cut(s) 169, 3644
BsrDI GCAATG 8 cut(s) 18, 229, 614, 1662, 1713, 1944, 2283, 2952
BsrFI RCCGGY 1 cut(s) 124
BsrGI TGTACA 2 cut(s) 1542, 2208
BssAI RCCGGY 1 cut(s) 124
BssECI CCNNGG 9 cut(s) 796, 1233, 1619, 2017, 2311, 2521, 3391, 3399, 3637
BssNI GRCGYC 1 cut(s) 3549
BssT1I CCWWGG 6 cut(s) 796, 2017, 2311, 2521, 3399, 3637
Bst2UI CCWGG 8 cut(s) 914, 1361, 1620, 2580, 2800, 2910, 3225, 3393
Bst6I CTCTTC 4 cut(s) 1493, 1940, 2526, 4229
BstACI GRCGYC 1 cut(s) 3549
BstAFI CTTAAG 2 cut(s) 302, 1600
BstAPI GCANNNNNTGC 3 cut(s) 1502, 1703, 3456
BstAUI TGTACA 2 cut(s) 1542, 2208
BstBAI YACGTR 1 cut(s) 1262
BstBI TTCGAA 1 cut(s) 3117
BstC8I GCNNGC 9 cut(s) 59, 126, 734, 910, 1188, 1498, 1704, 2505, 3457
BstEII GGTNACC 2 cut(s) 1792, 4088
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 4 cut(s) 131, 1955, 2148, 2249
BstHHI GCGC 6 cut(s) 94, 130, 259, 1954, 2147, 2248
BstMAI GTCTC 6 cut(s) 1129, 1190, 1673, 2083, 3195, 3755
BstMCI CGRYCG 1 cut(s) 65
BstNI CCWGG 8 cut(s) 914, 1361, 1620, 2580, 2800, 2910, 3225, 3393
BstNSI RCATGY 4 cut(s) 205, 1436, 1500, 3889
BstPAI GACNNNNGTC 1 cut(s) 71
BstPI GGTNACC 2 cut(s) 1792, 4088
BstSFI CTRYAG 3 cut(s) 2403, 2958, 3288
BstSLI GKGCMC 1 cut(s) 1627
BstUI CGCG 1 cut(s) 92
BstV2I GAAGAC 2 cut(s) 30, 2522
BstX2I RGATCY 3 cut(s) 649, 868, 4141
BstXI CCANNNNNNTGG 3 cut(s) 904, 1397, 4053
BstYI RGATCY 3 cut(s) 649, 868, 4141
BtrI CACGTC 1 cut(s) 100
BtsI GCAGTG 2 cut(s) 1997, 2589
BtsIMutI CAGTG 6 cut(s) 1734, 1818, 1997, 2211, 2589, 3472
BveI ACCTGC 1 cut(s) 845
Cac8I GCNNGC 9 cut(s) 59, 126, 734, 910, 1188, 1498, 1704, 2505, 3457
CaiI CAGNNNCTG 3 cut(s) 632, 872, 1897
CciI TCATGA 1 cut(s) 3960
CfoI GCGC 6 cut(s) 94, 130, 259, 1954, 2147, 2248
Cfr10I RCCGGY 1 cut(s) 124
Cfr13I GGNCC 8 cut(s) 348, 590, 1055, 1256, 1357, 3173, 3403, 4216
CseI GACGC 2 cut(s) 103, 3538
DraI TTTAAA 2 cut(s) 1738, 3832
DriI GACNNNNNGTC 1 cut(s) 2050
EaeI YGGCCR 5 cut(s) 159, 682, 1387, 3753, 3925
Eam1104I CTCTTC 4 cut(s) 1493, 1940, 2526, 4229
Eam1105I GACNNNNNGTC 1 cut(s) 2050
EarI CTCTTC 4 cut(s) 1493, 1940, 2526, 4229
Ecl136II GAGCTC 2 cut(s) 148, 1486
Eco130I CCWWGG 6 cut(s) 796, 2017, 2311, 2521, 3399, 3637
Eco147I AGGCCT 2 cut(s) 2205, 2578
Eco24I GRGCYC 2 cut(s) 150, 1488
Eco31I GGTCTC 1 cut(s) 3195
Eco47I GGWCC 5 cut(s) 1055, 1357, 3173, 3403, 4216
Eco47III AGCGCT 2 cut(s) 1953, 2247
Eco53kI GAGCTC 2 cut(s) 148, 1486
Eco57I CTGAAG 2 cut(s) 261, 2235
Eco72I CACGTG 1 cut(s) 1262
Eco88I CYCGRG 2 cut(s) 1274, 2721
Eco91I GGTNACC 2 cut(s) 1792, 4088
EcoICRI GAGCTC 2 cut(s) 148, 1486
EcoO109I RGGNCCY 2 cut(s) 3403, 4216
EcoO65I GGTNACC 2 cut(s) 1792, 4088
EcoRI GAATTC 3 cut(s) 460, 1800, 3490
EcoRII CCWGG 8 cut(s) 912, 1359, 1618, 2578, 2798, 2908, 3223, 3391
EcoT14I CCWWGG 6 cut(s) 796, 2017, 2311, 2521, 3399, 3637
EcoT22I ATGCAT 2 cut(s) 886, 3742
EcoT38I GRGCYC 2 cut(s) 150, 1488
ErhI CCWWGG 6 cut(s) 796, 2017, 2311, 2521, 3399, 3637
Esp3I CGTCTC 2 cut(s) 1190, 3755
FalI AAGNNNNNCTT 4 cut(s) 1402, 1434, 3443, 3475
FaqI GGGAC 1 cut(s) 507
FauI CCCGC 2 cut(s) 10, 3637
FauNDI CATATG 1 cut(s) 2764
FbaI TGATCA 1 cut(s) 927
FblI GTMKAC 1 cut(s) 65
FriOI GRGCYC 2 cut(s) 150, 1488
FspI TGCGCA 1 cut(s) 258
GlaI GCGC 6 cut(s) 93, 129, 258, 1953, 2146, 2247
GsuI CTGGAG 3 cut(s) 1059, 2601, 3505
HaeII RGCGCY 4 cut(s) 131, 1955, 2148, 2249
HgaI GACGC 2 cut(s) 103, 3538
HhaI GCGC 6 cut(s) 94, 130, 259, 1954, 2147, 2248
Hin1I GRCGYC 1 cut(s) 3549
Hin6I GCGC 6 cut(s) 92, 128, 257, 1952, 2145, 2246
HinP1I GCGC 6 cut(s) 92, 128, 257, 1952, 2145, 2246
HincII GTYRAC 3 cut(s) 66, 250, 2824
HindII GTYRAC 3 cut(s) 66, 250, 2824
HindIII AAGCTT 2 cut(s) 3120, 3433
HinfI GANTC 6 cut(s) 396, 451, 1296, 1820, 2345, 2780
Hpy99I CGWCG 2 cut(s) 70, 3065
HpyCH4IV ACGT 9 cut(s) 99, 252, 790, 1199, 1261, 1677, 2806, 3309, 3573
HpySE526I ACGT 9 cut(s) 99, 252, 790, 1199, 1261, 1677, 2806, 3309, 3573
Hsp92I GRCGYC 1 cut(s) 3549
HspAI GCGC 6 cut(s) 92, 128, 257, 1952, 2145, 2246
KroI GCCGGC 1 cut(s) 124
KroNI GCCGGC 1 cut(s) 126
Ksp22I TGATCA 1 cut(s) 927
LguI GCTCTTC 1 cut(s) 1493
LweI GCATC 7 cut(s) 268, 412, 841, 871, 1738, 3007, 4085
MaeII ACGT 9 cut(s) 99, 252, 790, 1199, 1261, 1677, 2806, 3309, 3573
MaeIII GTNAC 7 cut(s) 670, 1030, 1342, 1792, 1893, 2767, 4088
MbiI CCGCTC 2 cut(s) 169, 3644
MfeI CAATTG 7 cut(s) 411, 1581, 1983, 2106, 2369, 3942, 4047
MflI RGATCY 3 cut(s) 649, 868, 4141
MhlI GDGCHC 4 cut(s) 150, 445, 1488, 1627
MlsI TGGCCA 2 cut(s) 1389, 3755
MluNI TGGCCA 2 cut(s) 1389, 3755
MlyI GAGTC 1 cut(s) 445
MmeI TCCRAC 9 cut(s) 473, 481, 784, 1033, 1077, 1797, 2221, 2881, 4135
Mox20I TGGCCA 2 cut(s) 1389, 3755
Mph1103I ATGCAT 2 cut(s) 886, 3742
MroNI GCCGGC 1 cut(s) 124
MroXI GAANNNNTTC 3 cut(s) 3652, 3721, 3977
MscI TGGCCA 2 cut(s) 1389, 3755
MslI CAYNNNNRTG 5 cut(s) 750, 902, 1790, 3038, 3890
Msp20I TGGCCA 2 cut(s) 1389, 3755
MspA1I CMGCKG 2 cut(s) 109, 3029
MspCI CTTAAG 2 cut(s) 302, 1600
MunI CAATTG 7 cut(s) 411, 1581, 1983, 2106, 2369, 3942, 4047
Mva1269I GAATGC 2 cut(s) 2570, 2896
MvaI CCWGG 8 cut(s) 914, 1361, 1620, 2580, 2800, 2910, 3225, 3393
MvnI CGCG 1 cut(s) 92
NaeI GCCGGC 1 cut(s) 126
NciI CCSGG 2 cut(s) 597, 3924
NdeI CATATG 1 cut(s) 2764
NgoMIV GCCGGC 1 cut(s) 124
NlaIV GGNNCC 4 cut(s) 436, 1517, 3397, 4217
NmuCI GTSAC 5 cut(s) 670, 1030, 1342, 1792, 4088
NsbI TGCGCA 1 cut(s) 258
NsiI ATGCAT 2 cut(s) 886, 3742
NspI RCATGY 4 cut(s) 205, 1436, 1500, 3889
NspV TTCGAA 1 cut(s) 3117
OliI CACNNNNGTG 1 cut(s) 902
PaeI GCATGC 1 cut(s) 1500
PaeR7I CTCGAG 1 cut(s) 1274
PagI TCATGA 1 cut(s) 3960
PceI AGGCCT 2 cut(s) 2205, 2578
PciI ACATGT 1 cut(s) 3885
PciSI GCTCTTC 1 cut(s) 1493
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 2 cut(s) 2570, 2896
PdiI GCCGGC 1 cut(s) 126
PdmI GAANNNNTTC 3 cut(s) 3652, 3721, 3977
PfeI GAWTC 5 cut(s) 396, 1296, 1820, 2345, 2780
Pfl23II CGTACG 1 cut(s) 1200
PfoI TCCNGGA 3 cut(s) 595, 2908, 3223
PleI GAGTC 1 cut(s) 445
PmaCI CACGTG 1 cut(s) 1262
PmlI CACGTG 1 cut(s) 1262
PpsI GAGTC 1 cut(s) 445
Ppu21I YACGTR 1 cut(s) 1262
PpuMI RGGWCCY 2 cut(s) 3403, 4216
PscI ACATGT 1 cut(s) 3885
PshAI GACNNNNGTC 1 cut(s) 71
PshBI ATTAAT 1 cut(s) 2115
Psp124BI GAGCTC 2 cut(s) 150, 1488
Psp1406I AACGTT 1 cut(s) 3309
Psp5II RGGWCCY 2 cut(s) 3403, 4216
Psp6I CCWGG 8 cut(s) 912, 1359, 1618, 2578, 2798, 2908, 3223, 3391
PspCI CACGTG 1 cut(s) 1262
PspEI GGTNACC 2 cut(s) 1792, 4088
PspGI CCWGG 8 cut(s) 912, 1359, 1618, 2578, 2798, 2908, 3223, 3391
PspLI CGTACG 1 cut(s) 1200
PspN4I GGNNCC 4 cut(s) 436, 1517, 3397, 4217
PspPI GGNCC 8 cut(s) 348, 590, 1055, 1256, 1357, 3173, 3403, 4216
PspPPI RGGWCCY 2 cut(s) 3403, 4216
PspXI VCTCGAGB 1 cut(s) 1274
PstI CTGCAG 2 cut(s) 2407, 3292
PstNI CAGNNNCTG 3 cut(s) 632, 872, 1897
PsuI RGATCY 3 cut(s) 649, 868, 4141
PvuII CAGCTG 1 cut(s) 3029
RseI CAYNNNNRTG 5 cut(s) 750, 902, 1790, 3038, 3890
SacI GAGCTC 2 cut(s) 150, 1488
SalI GTCGAC 1 cut(s) 64
SapI GCTCTTC 1 cut(s) 1493
Sau96I GGNCC 8 cut(s) 348, 590, 1055, 1256, 1357, 3173, 3403, 4216
SchI GAGTC 1 cut(s) 445
SduI GDGCHC 4 cut(s) 150, 445, 1488, 1627
SfaNI GCATC 7 cut(s) 268, 412, 841, 871, 1738, 3007, 4085
SfcI CTRYAG 3 cut(s) 2403, 2958, 3288
Sfr274I CTCGAG 1 cut(s) 1274
SfuI TTCGAA 1 cut(s) 3117
SinI GGWCC 5 cut(s) 1055, 1357, 3173, 3403, 4216
SlaI CTCGAG 1 cut(s) 1274
SmiMI CAYNNNNRTG 5 cut(s) 750, 902, 1790, 3038, 3890
SmlI CTYRAG 8 cut(s) 149, 302, 944, 1274, 1348, 1600, 2884, 4151
SmoI CTYRAG 8 cut(s) 149, 302, 944, 1274, 1348, 1600, 2884, 4151
SphI GCATGC 1 cut(s) 1500
SseBI AGGCCT 2 cut(s) 2205, 2578
SspI AATATT 2 cut(s) 2222, 3209
SstI GAGCTC 2 cut(s) 150, 1488
StuI AGGCCT 2 cut(s) 2205, 2578
StyI CCWWGG 6 cut(s) 796, 2017, 2311, 2521, 3399, 3637
TaiI ACGT 9 cut(s) 102, 255, 793, 1202, 1264, 1680, 2809, 3312, 3576
TaqI TCGA 7 cut(s) 41, 65, 480, 515, 1275, 3063, 3117
TaqII GACCGA 1 cut(s) 3177
TatI WGTACW 4 cut(s) 1542, 2208, 3380, 3498
TauI GCSGC 5 cut(s) 8, 11, 161, 684, 2145
TfiI GAWTC 5 cut(s) 396, 1296, 1820, 2345, 2780
TscAI CASTG 6 cut(s) 1734, 1818, 2004, 2218, 2596, 3479
TseFI GTSAC 5 cut(s) 670, 1030, 1342, 1792, 4088
Tsp45I GTSAC 5 cut(s) 670, 1030, 1342, 1792, 4088
TspGWI ACGGA 2 cut(s) 1928, 4112
TspRI CASTG 6 cut(s) 1734, 1818, 2004, 2218, 2596, 3479
Vha464I CTTAAG 2 cut(s) 302, 1600
VpaK11BI GGWCC 5 cut(s) 1055, 1357, 3173, 3403, 4216
VspI ATTAAT 1 cut(s) 2115
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 4 cut(s) 205, 1436, 1500, 3889
XcmI CCANNNNNNNNNTGG 3 cut(s) 2437, 2989, 4118
XhoI CTCGAG 1 cut(s) 1274
XmaJI CCTAGG 2 cut(s) 796, 2017
XmiI GTMKAC 1 cut(s) 65
XmnI GAANNNNTTC 3 cut(s) 3652, 3721, 3977
Zsp2I ATGCAT 2 cut(s) 886, 3742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.