pycom11g12970

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
12019595 .. 12026611
7017 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g12970.14

Sequence Viewer

Length: 3990 bp
ATGGCGGCGGCGTTAGCCGGAGATGATCTGGTCAGGCAGTCAAGTCTGGCCAGGCAGTCGAGCAGCCGGCGGAGCTGGCGGTCGACTAGTGTTCGGGAAATGTGGAACGCACCGGACGTGTTCCAGAGGAGCGGGCGGCAGCAGGTGGAGGATGAGGAGGAGGAGCTCAAGTGGGCGGCCATAGAAAGGTTGCCCACATATGATAGGATGAGGAGGGGGATGCTGAGGCAGGCCATGAGCAATGGGAGGTTTGTAACTGAAGAAGTCGACGTCGCGAATCTTGGGGCACAAGACAAGAAGCAGTTGATGGAGAGCATACTTAAGGTTGTGGAGGATGACAATGAAAGGTTCTTGCAAAGGCTCAGAGCCAGAAATGACAGGGTTGGTATTGAGGTTCCTAAGGTTGAGGTTAGATTCCAGAATATATCAATTGAGGGAGATGCATATGTCGGTACCAGAGCACTTCCAACTCTGCTCAATTCCACCTTGAACCAGCTTGAGGGACTAGCTGGATTGATTGGACTCTCACAATCGAAGAAAAGAGTTGTCAAGATACTCCAAGATGTGAGCGGTGTTATTAAACCGTCAAGGATGACGCTGCTTCTTGGACCTCCGTCATCAGGAAAAACAACACTGCTAAAAGCACTTGCTGGCAAACTCGATAAGGATCTAAGGGTAACTGGGAACGTGACCTATTGTGGCCATGAATTCCATGAATTTGTGCCTCAGAGAACTTCTGCTTATATTAGCCAACATGATCTTGATTATGGTGAGATGACAGTTCGTGAAACATTGGATTTCTCTGGACGTTGCTTGGGAGTTGGAACCAGGTATGATTTGCTGGTAGAATTGTCTAGACGGGAGAAAGATTCAGGTATCAAACCGGATCCTGAAATTGATGCATTCATGAAAGCTACATCTATGGTTGGCCAGGAAACTAGATCGATCACAGATTACGTTCTCAAGATACTTGGACTTGATATCTGTGCTGACATTATGGTGGGTGATGACATGAGAAGGGGTATATCCGGTGGACAGAAGAAACGTGTAACTACTGGAGAAATGTTGGTTGGACCTGCGAAAGCATTTTTCATGGATGAAATATCAACGGGGCTGGATAGTTCCACAACCTTTCAGATTGTCAAGTTCATGAAGCAGATGGTTCATATTATGGAAGTGTCAATGGTGATCTCTCTCTTGCAGCCTGCACCTGAGAAGGATGATCTGTTTGATGACATTATGCTTCTTTCTGAGGGTCAGATTGTGTACCACGGTCCACGCGAGAATGTGCTTGAGTTCTTCAAATATCTAGGCTTCAGATGCCCTGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTGACATCAAAGAAAGACCAAGAGCAATACTGGTATAAGAAGAACCAACCTTACAGATATGTTTCAGTATCTGATTTCGTTCAAGCTTTCCCCACTTTTCATGTTGGCCAACGTCTTGTGGAAGACCTAAGAGTTCCTTACGATAAAAGATCAGTCCATCCTGCTGCTCTAGTGACGGATAAGTATGGAATATCCAATACGGAGCTCTTCAAGGCATGCTTTGCAAGGGAATGGTTGCTGATGAAGCGTAACTCTTTCGTGTACATATTCAAAACTACGCAGATAACAATCATGGCTACAATTGCTCTGACGGTATTCTTAAGAACAGAAATGAAAGCTGGAAGAGCAGAAGATTCGGCAAAATTCTGGGGAGCACTGTTTTTCAGTCTCATTAACGTCATGTTTAATGGAATGGCAGAGCTTGCAATGACAGTTTTTAGGATTCCTGTGTTCTTTAAACAAAGGGATGCGTTGTTTTATCCTGGCTGGGCTTTTGGCTTGCCCATTTCGCTAACCAGAATCCCCATTTCATTGATGGAATCTGGGATATGGATTCTTTTAACATACTACACAATCGGGTTTGCACCTGCGGCCAGTAGGTTCTTCAAACAGTTTTTGGCTTTCTTCGGTGTACATCAGGTGGCACTTTCCCTTTTCCGTTTTATTGCTGCCCTTGGAAGAACAGAGGTTGTTGCGAGCACAATTGGTTCCTTTACATTGCTACTGGTGTTTGTCCTTGGAGGTTTTGTTGTCGCTAAAGATGACATCAAGTCATGGATGATATGGGGCTACTATATTTCACCTATGATGTATGGGCAAAATGCAATTGCTATCAATGAGTTTCTTGATAAAAGATGGAGTCAAGAAATGAAGAGCCAAGGGATTGAAGAGACCCGACTCCAACTTCTACGAGATGTCAGTGGTGCATTTAGGCCTGGTGTTTTGACTGCATTAGTTGGTGTCAGCGGTGCTGGAAAGACAACCTTGATGGATGTCTTAGCTGGAAGAAAGACCGGCGGGTACATTGAAGGAAGTATTACCATCTCTGGTTACCCAAAGAACCAAGCCACATTTGCTCGAGTCAGCGGTTACTGTGAACAAAATGATATTCATTCACCATTTGTTACTGTCTATGAGTCTCTCCTATACTCTGCCTGGCTGCGTCTTGCTAAAGATGTCAAGACCGAAACACGAAAGATGTTTGTTGATGAGGTTATGGATTTGGTTGAGCTTAACCCATTGAGAAATGCTTTGGTTGGACTTCCGGGAGTTGATGGACTTTCAACTGAGCAGAGAAAGAGGCTCACTATTGCTGTAGAATTGGTTGCCAACCCTTCCATCATCTTCATGGATGAGCCGACATCAGGTCTTGATGCTAGAGCAGCCGCCATTGTTATGCGTACTGTAAGAAACACTGTGGATACAGGACGAACTGTTGTCTGCACAATTCACCAGCCTAGCATTGACATTTTTGAAGCTTTTGATGAGCTTTTCTTGATGAAAAGAGGTGGGCAGGTGATTTATGCCGGTCCTCTAGGTCGCCAGTCTCACAAACTTGTTGAATACTTTGAGGCTATTCCAGGGGTTGCAAAGATCAAAGAAGGTTACAATCCAGCTACCTGGATGTTGGAGGTCAGCTCGGCTGCCATTGAGGCTCAAAATGATGTGGACTTTGCAGAAATATTTGCGAACTCTGATCAATATAGGAGAAATCAAGAACTTATCAAGGAACTAAGCATGCCAGAACCAGGCTCCAATGATCTTTATTTCCCTACCCAATACTCCCAAAGCTTCGTAACACAATGCAAGGCATGCTTCTGGAAACAACATTGGTCGTACTGGAGAAACTCACGATACAATGCCATTAGGTTTTTCATGACAATCTGCATTGGAGTATTATTTGGTGTTATCTTCTGGGGCAAAGGAGACAAGATACACCAACAACAAGACCTTATCAATCTTTTGGGAGCTACCTATTCCGCCGTCCTTTTCCTTGGAGCTAGCAATGCATCTGCTGTGCAATCCGTGGTTGCGGTTGAACGAACAGTTTTCTATCGTGAAAGAGCAGCTGGAATGTATTCAGAGTTGCCTTATGCATTTGCTCAGGTGGCTATTGAGACAATTTACGTTGCAATCCAAACCTTCGTCTATTCCTGCCTTCTGTTTTTCATGATTGGGTACACTTTCAAGGTGGAGAAGTTTTTGTACTTCTACTACTTCATCTTCATGTGCTTTACCTACTTCTCTATGTACGGAATGATGGTTGTTGCCCTGACTCCTGGCCATCAAATTGCTGCAATTGTTATGTCATTCTTCTTGAGTTTCTGGAACTTGTTCTCGGGCTTCCTCATTCCCAGGCCGCTAATTCCTATTTGGTGGAGGTGGTACTACTGGGGTTCACCCGTTGCCTGGACAATTTACGGTATCTTCACATCTCAAGTAGGTGACATGAAGACTGAGGTCAGTAGTCCAATTCAAAAACCACAAAGAATTGATGTATTCCTCAAGAGCTACTTAGGTTTTGACTACGATTTTCTGATCCCTGTTGTCATCGCTCATCTTGGTTGGGTCCTCCTCTTCTTCTTCGTCTTTGCCTACGGCATCAAGTACCTTAACTTCCAAAGGAGATAA

Protein Analysis

1330

Amino Acids

150.99

Weight (kDa)

8.54

Isoelectric Point (pI)

38.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 133, 1954, 2863
AatII GACGTC 1 cut(s) 273
Acc36I ACCTGC 4 cut(s) 133, 1084, 1954, 2863
Acc65I GGTACC 1 cut(s) 452
AccB1I GGYRCC 1 cut(s) 452
AccBSI CCGCTC 2 cut(s) 132, 570
AccI GTMKAC 2 cut(s) 83, 267
AccII CGCG 2 cut(s) 275, 1281
AclWI GGATC 4 cut(s) 675, 881, 894, 3892
AcoI YGGCCR 7 cut(s) 48, 177, 700, 928, 1465, 1950, 3640
AcsI RAATTY 3 cut(s) 707, 716, 1721
AcuI CTGAAG 2 cut(s) 279, 1300
AcyI GRCGYC 1 cut(s) 270
AfiI CCNNNNNNNGG 6 cut(s) 186, 499, 620, 2723, 3107, 3768
AflII CTTAAG 2 cut(s) 320, 1678
AflIII ACRYGT 2 cut(s) 117, 1045
AhdI GACNNNNNGTC 2 cut(s) 2128, 2724
AhlI ACTAGT 1 cut(s) 86
AjiI CACGTC 1 cut(s) 118
AjuI GAANNNNNNNTTGG 2 cut(s) 1053, 1085
Alw21I GWGCWC 5 cut(s) 168, 463, 1566, 1735, 2060
Alw26I GTCTC 6 cut(s) 1751, 2243, 2502, 2910, 3279, 3470
AlwI GGATC 4 cut(s) 675, 881, 894, 3892
AlwNI CAGNNNCTG 1 cut(s) 1430
Ama87I CYCGRG 2 cut(s) 2436, 3697
ApoI RAATTY 3 cut(s) 707, 716, 1721
Asp700I GAANNNNTTC 2 cut(s) 3436, 3692
Asp718I GGTACC 1 cut(s) 452
AspS9I GGNCC 5 cut(s) 608, 1073, 1274, 2888, 3928
AsuC2I CCSGG 1 cut(s) 2625
AsuHPI GGTGA 9 cut(s) 782, 1016, 1198, 2151, 2466, 2801, 2887, 3750, 3815
AsuNHI GCTAGC 1 cut(s) 3359
AvaI CYCGRG 2 cut(s) 2436, 3697
AvaII GGWCC 5 cut(s) 608, 1073, 1274, 2888, 3928
AxyI CCTNAGG 1 cut(s) 399
BaeGI GKGCMC 1 cut(s) 289
BalI TGGCCA 5 cut(s) 50, 702, 930, 1467, 3642
BamHI GGATCC 1 cut(s) 886
BanI GGYRCC 1 cut(s) 452
BanII GRGCYC 2 cut(s) 168, 1566
BarI GAAGNNNNNNTAC 3 cut(s) 3548, 3580, 3959
BbsI GAAGAC 2 cut(s) 1488, 3818
Bbv12I GWGCWC 5 cut(s) 168, 463, 1566, 1735, 2060
BbvCI CCTCAGC 1 cut(s) 224
BceAI ACGGC 2 cut(s) 3326, 3973
BcgI CGANNNNNNTGC 2 cut(s) 1695, 1729
BciVI GTATCC 1 cut(s) 2773
BclI TGATCA 1 cut(s) 3055
BcnI CCSGG 1 cut(s) 2625
BcoDI GTCTC 6 cut(s) 1751, 2243, 2502, 2910, 3279, 3470
BcuI ACTAGT 1 cut(s) 86
BfmI CTRYAG 1 cut(s) 2673
BfrI CTTAAG 2 cut(s) 320, 1678
BfuAI ACCTGC 4 cut(s) 133, 1084, 1954, 2863
BfuI GTATCC 1 cut(s) 2773
BglI GCCNNNNNGGC 1 cut(s) 3011
Bme18I GGWCC 5 cut(s) 608, 1073, 1274, 2888, 3928
BmeRI GACNNNNNGTC 2 cut(s) 2128, 2724
BmeT110I CYCGRG 2 cut(s) 2436, 3697
BmgBI CACGTC 1 cut(s) 118
BmgT120I GGNCC 5 cut(s) 608, 1073, 1274, 2888, 3928
BmiI GGNNCC 7 cut(s) 396, 454, 826, 888, 2068, 3112, 3929
BmrI ACTGGG 2 cut(s) 690, 3760
BmsI GCATC 8 cut(s) 210, 430, 889, 1310, 1816, 2722, 3377, 3969
BmtI GCTAGC 1 cut(s) 3363
BmuI ACTGGG 2 cut(s) 690, 3760
BoxI GACNNNNGTC 2 cut(s) 613, 3818
BpiI GAAGAC 2 cut(s) 1488, 3818
BplI GAGNNNNNCTC 2 cut(s) 2981, 3013
BpmI CTGGAG 2 cut(s) 1077, 3220
Bpu10I CCTNAGC 2 cut(s) 224, 3462
BpuEI CTTGAG 7 cut(s) 152, 518, 947, 1313, 3697, 3780, 3848
BpuMI CCSGG 1 cut(s) 2625
Bsa29I ATCGAT 1 cut(s) 944
BsaBI GATNNNNATC 2 cut(s) 666, 1646
BsaHI GRCGYC 1 cut(s) 270
BsaI GGTCTC 1 cut(s) 2243
BsaJI CCNNGG 8 cut(s) 1270, 2032, 2095, 2236, 2939, 3352, 3384, 3713
BsaWI WCCGGW 3 cut(s) 112, 883, 1028
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 2091, 2121
Bsc4I CCNNNNNNNGG 6 cut(s) 186, 499, 620, 2723, 3107, 3768
Bse118I RCCGGY 3 cut(s) 66, 2372, 2885
Bse1I ACTGG 8 cut(s) 685, 1060, 1394, 1953, 2088, 2902, 3203, 3755
Bse21I CCTNAGG 1 cut(s) 399
Bse3DI GCAATG 4 cut(s) 247, 1791, 2075, 3370
Bse8I GATNNNNATC 2 cut(s) 666, 1646
BseCI ATCGAT 1 cut(s) 944
BseDI CCNNGG 8 cut(s) 1270, 2032, 2095, 2236, 2939, 3352, 3384, 3713
BseJI GATNNNNATC 2 cut(s) 666, 1646
BseLI CCNNNNNNNGG 6 cut(s) 186, 499, 620, 2723, 3107, 3768
BseMI GCAATG 4 cut(s) 247, 1791, 2075, 3370
BseMII CTCAG 8 cut(s) 215, 376, 740, 1203, 1242, 2637, 3476, 3807
BseNI ACTGG 8 cut(s) 685, 1060, 1394, 1953, 2088, 2902, 3203, 3755
BseRI GAGGAG 6 cut(s) 142, 170, 173, 176, 226, 3923
BseSI GKGCMC 1 cut(s) 289
BseYI CCCAGC 1 cut(s) 1845
BsgI GTGCAG 2 cut(s) 1191, 2785
Bsh1236I CGCG 2 cut(s) 275, 1281
Bsh1285I CGRYCG 1 cut(s) 83
BshNI GGYRCC 1 cut(s) 452
BshVI ATCGAT 1 cut(s) 944
BsiEI CGRYCG 1 cut(s) 83
BsiHKAI GWGCWC 5 cut(s) 168, 463, 1566, 1735, 2060
BsiHKCI CYCGRG 2 cut(s) 2436, 3697
BsiSI CCGG 8 cut(s) 18, 67, 113, 884, 1029, 2373, 2624, 2886
BslFI GGGAC 1 cut(s) 516
BslI CCNNNNNNNGG 6 cut(s) 186, 499, 620, 2723, 3107, 3768
BsmAI GTCTC 6 cut(s) 1751, 2243, 2502, 2910, 3279, 3470
BsmFI GGGAC 1 cut(s) 516
BsmI GAATGC 1 cut(s) 902
Bso31I GGTCTC 1 cut(s) 2243
BsoBI CYCGRG 2 cut(s) 2436, 3697
Bsp1286I GDGCHC 6 cut(s) 168, 289, 463, 1566, 1735, 2060
Bsp1407I TGTACA 2 cut(s) 1620, 1990
Bsp68I TCGCGA 1 cut(s) 275
BspCNI CTCAG 8 cut(s) 216, 375, 739, 1204, 1243, 2638, 3475, 3808
BspDI ATCGAT 1 cut(s) 944
BspFNI CGCG 2 cut(s) 275, 1281
BspHI TCATGA 4 cut(s) 906, 1149, 3234, 3528
BspLI GGNNCC 7 cut(s) 396, 454, 826, 888, 2068, 3112, 3929
BspMI ACCTGC 4 cut(s) 133, 1084, 1954, 2863
BspOI GCTAGC 1 cut(s) 3363
BspPI GGATC 4 cut(s) 675, 881, 894, 3892
BspQI GCTCTTC 3 cut(s) 1571, 1696, 2225
BspT107I GGYRCC 1 cut(s) 452
BspTI CTTAAG 2 cut(s) 320, 1678
BspTNI GGTCTC 1 cut(s) 2243
BsrBI CCGCTC 2 cut(s) 132, 570
BsrDI GCAATG 4 cut(s) 247, 1791, 2075, 3370
BsrFI RCCGGY 3 cut(s) 66, 2372, 2885
BsrGI TGTACA 2 cut(s) 1620, 1990
BsrI ACTGG 8 cut(s) 685, 1060, 1394, 1953, 2088, 2902, 3203, 3755
BssAI RCCGGY 3 cut(s) 66, 2372, 2885
BssECI CCNNGG 8 cut(s) 1270, 2032, 2095, 2236, 2939, 3352, 3384, 3713
BssNI GRCGYC 1 cut(s) 270
BssT1I CCWWGG 4 cut(s) 2032, 2095, 2236, 3352
Bst6I CTCTTC 5 cut(s) 1571, 1696, 2225, 2241, 3941
BstACI GRCGYC 1 cut(s) 270
BstAFI CTTAAG 2 cut(s) 320, 1678
BstAPI GCANNNNNTGC 3 cut(s) 1580, 1781, 3171
BstAUI TGTACA 2 cut(s) 1620, 1990
BstDSI CCRYGG 2 cut(s) 1270, 3384
BstEII GGTNACC 1 cut(s) 2408
BstFNI CGCG 2 cut(s) 275, 1281
BstMAI GTCTC 6 cut(s) 1751, 2243, 2502, 2910, 3279, 3470
BstMCI CGRYCG 1 cut(s) 83
BstNSI RCATGY 3 cut(s) 1578, 3100, 3174
BstPAI GACNNNNGTC 2 cut(s) 613, 3818
BstPI GGTNACC 1 cut(s) 2408
BstSFI CTRYAG 1 cut(s) 2673
BstSLI GKGCMC 1 cut(s) 289
BstUI CGCG 2 cut(s) 275, 1281
BstV2I GAAGAC 2 cut(s) 1488, 3818
BstX2I RGATCY 2 cut(s) 667, 886
BstXI CCANNNNNNTGG 1 cut(s) 2979
BstYI RGATCY 2 cut(s) 667, 886
Bsu15I ATCGAT 1 cut(s) 944
Bsu36I CCTNAGG 1 cut(s) 399
BsuI GTATCC 1 cut(s) 2773
BsuTUI ATCGAT 1 cut(s) 944
BtgI CCRYGG 2 cut(s) 1270, 3384
BtgZI GCGATG 1 cut(s) 3895
BtrI CACGTC 1 cut(s) 118
BtsI GCAGTG 1 cut(s) 632
BtsIMutI CAGTG 4 cut(s) 632, 1733, 2284, 2772
BtuMI TCGCGA 1 cut(s) 275
BveI ACCTGC 4 cut(s) 133, 1084, 1954, 2863
CaiI CAGNNNCTG 1 cut(s) 1430
CciI TCATGA 4 cut(s) 906, 1149, 3234, 3528
Cfr10I RCCGGY 3 cut(s) 66, 2372, 2885
Cfr13I GGNCC 5 cut(s) 608, 1073, 1274, 2888, 3928
ClaI ATCGAT 1 cut(s) 944
CseI GACGC 2 cut(s) 604, 2510
CsiI ACCWGGT 1 cut(s) 827
DraI TTTAAA 1 cut(s) 1816
DriI GACNNNNNGTC 2 cut(s) 2128, 2724
EaeI YGGCCR 7 cut(s) 48, 177, 700, 928, 1465, 1950, 3640
Eam1104I CTCTTC 5 cut(s) 1571, 1696, 2225, 2241, 3941
Eam1105I GACNNNNNGTC 2 cut(s) 2128, 2724
EarI CTCTTC 5 cut(s) 1571, 1696, 2225, 2241, 3941
EciI GGCGGA 2 cut(s) 85, 3328
Ecl136II GAGCTC 2 cut(s) 166, 1564
Eco130I CCWWGG 4 cut(s) 2032, 2095, 2236, 3352
Eco147I AGGCCT 1 cut(s) 2293
Eco24I GRGCYC 2 cut(s) 168, 1566
Eco31I GGTCTC 1 cut(s) 2243
Eco32I GATATC 1 cut(s) 982
Eco47I GGWCC 5 cut(s) 608, 1073, 1274, 2888, 3928
Eco53kI GAGCTC 2 cut(s) 166, 1564
Eco57I CTGAAG 2 cut(s) 279, 1300
Eco81I CCTNAGG 1 cut(s) 399
Eco88I CYCGRG 2 cut(s) 2436, 3697
Eco91I GGTNACC 1 cut(s) 2408
EcoICRI GAGCTC 2 cut(s) 166, 1564
EcoO109I RGGNCCY 1 cut(s) 3928
EcoO65I GGTNACC 1 cut(s) 2408
EcoRI GAATTC 1 cut(s) 707
EcoRV GATATC 1 cut(s) 982
EcoT14I CCWWGG 4 cut(s) 2032, 2095, 2236, 3352
EcoT22I ATGCAT 4 cut(s) 445, 904, 3370, 3457
EcoT38I GRGCYC 2 cut(s) 168, 1566
ErhI CCWWGG 4 cut(s) 2032, 2095, 2236, 3352
FaqI GGGAC 1 cut(s) 516
FauI CCCGC 2 cut(s) 125, 2369
FauNDI CATATG 2 cut(s) 199, 445
FbaI TGATCA 1 cut(s) 3055
FblI GTMKAC 2 cut(s) 83, 267
FriOI GRGCYC 2 cut(s) 168, 1566
GsaI CCCAGC 1 cut(s) 1849
GsuI CTGGAG 2 cut(s) 1077, 3220
HapII CCGG 8 cut(s) 18, 67, 113, 884, 1029, 2373, 2624, 2886
HgaI GACGC 2 cut(s) 604, 2510
Hin1I GRCGYC 1 cut(s) 270
HincII GTYRAC 2 cut(s) 84, 268
HindII GTYRAC 2 cut(s) 84, 268
HindIII AAGCTT 3 cut(s) 1443, 2835, 3148
HpaII CCGG 8 cut(s) 18, 67, 113, 884, 1029, 2373, 2624, 2886
HphI GGTGA 9 cut(s) 782, 1016, 1198, 2151, 2466, 2801, 2887, 3750, 3815
Hpy99I CGWCG 2 cut(s) 272, 275
HpyAV CCTTC 7 cut(s) 1011, 1210, 2381, 2703, 2954, 3511, 3527
HpyCH4IV ACGT 9 cut(s) 117, 270, 687, 808, 957, 1045, 1471, 1755, 3486
HpySE526I ACGT 9 cut(s) 117, 270, 687, 808, 957, 1045, 1471, 1755, 3486
Hsp92I GRCGYC 1 cut(s) 270
KpnI GGTACC 1 cut(s) 456
KroI GCCGGC 1 cut(s) 66
KroNI GCCGGC 1 cut(s) 68
Ksp22I TGATCA 1 cut(s) 3055
LguI GCTCTTC 3 cut(s) 1571, 1696, 2225
LmnI GCTCC 8 cut(s) 72, 129, 163, 1561, 1730, 3116, 3326, 3356
LweI GCATC 8 cut(s) 210, 430, 889, 1310, 1816, 2722, 3377, 3969
MabI ACCWGGT 1 cut(s) 827
MaeII ACGT 9 cut(s) 117, 270, 687, 808, 957, 1045, 1471, 1755, 3486
MbiI CCGCTC 2 cut(s) 132, 570
MfeI CAATTG 5 cut(s) 429, 1659, 2061, 2184, 3657
MflI RGATCY 2 cut(s) 667, 886
MhlI GDGCHC 6 cut(s) 168, 289, 463, 1566, 1735, 2060
MlsI TGGCCA 5 cut(s) 50, 702, 930, 1467, 3642
MluNI TGGCCA 5 cut(s) 50, 702, 930, 1467, 3642
MlyI GAGTC 6 cut(s) 516, 2227, 2250, 2448, 2504, 3628
MmeI TCCRAC 6 cut(s) 491, 802, 1051, 2284, 2596, 2967
Mox20I TGGCCA 5 cut(s) 50, 702, 930, 1467, 3642
Mph1103I ATGCAT 4 cut(s) 445, 904, 3370, 3457
MroNI GCCGGC 1 cut(s) 66
MroXI GAANNNNTTC 2 cut(s) 3436, 3692
MscI TGGCCA 5 cut(s) 50, 702, 930, 1467, 3642
MseI TTAA 9 cut(s) 321, 579, 1679, 1752, 1764, 1815, 1919, 2592, 3972
MslI CAYNNNNRTG 4 cut(s) 998, 2705, 2753, 3584
Msp20I TGGCCA 5 cut(s) 50, 702, 930, 1467, 3642
MspA1I CMGCKG 3 cut(s) 2325, 2445, 3428
MspCI CTTAAG 2 cut(s) 320, 1678
MspI CCGG 8 cut(s) 18, 67, 113, 884, 1029, 2373, 2624, 2886
MunI CAATTG 5 cut(s) 429, 1659, 2061, 2184, 3657
Mva1269I GAATGC 1 cut(s) 902
MvnI CGCG 2 cut(s) 275, 1281
NaeI GCCGGC 1 cut(s) 68
NciI CCSGG 1 cut(s) 2625
NdeI CATATG 2 cut(s) 199, 445
NgoMIV GCCGGC 1 cut(s) 66
NheI GCTAGC 1 cut(s) 3359
NlaIV GGNNCC 7 cut(s) 396, 454, 826, 888, 2068, 3112, 3929
NmeAIII GCCGAG 1 cut(s) 2978
NmuCI GTSAC 4 cut(s) 688, 1360, 1531, 3803
NruI TCGCGA 1 cut(s) 275
NsiI ATGCAT 4 cut(s) 445, 904, 3370, 3457
NspI RCATGY 3 cut(s) 1578, 3100, 3174
PaeI GCATGC 3 cut(s) 1578, 3100, 3174
PaeR7I CTCGAG 1 cut(s) 2436
PagI TCATGA 4 cut(s) 906, 1149, 3234, 3528
PaqCI CACCTGC 3 cut(s) 133, 1954, 2863
PceI AGGCCT 1 cut(s) 2293
PciSI GCTCTTC 3 cut(s) 1571, 1696, 2225
PcsI WCGNNNNNNNCGW 2 cut(s) 114, 1278
PctI GAATGC 1 cut(s) 902
PdiI GCCGGC 1 cut(s) 68
PdmI GAANNNNTTC 2 cut(s) 3436, 3692
PfeI GAWTC 8 cut(s) 277, 414, 869, 1712, 1801, 1878, 1898, 1912
PfoI TCCNGGA 1 cut(s) 2623
PleI GAGTC 6 cut(s) 516, 2226, 2250, 2447, 2503, 3628
PpsI GAGTC 6 cut(s) 516, 2226, 2250, 2447, 2503, 3628
PpuMI RGGWCCY 1 cut(s) 3928
PshAI GACNNNNGTC 2 cut(s) 613, 3818
Psp124BI GAGCTC 2 cut(s) 168, 1566
Psp5II RGGWCCY 1 cut(s) 3928
PspEI GGTNACC 1 cut(s) 2408
PspFI CCCAGC 1 cut(s) 1845
PspN4I GGNNCC 7 cut(s) 396, 454, 826, 888, 2068, 3112, 3929
PspPI GGNCC 5 cut(s) 608, 1073, 1274, 2888, 3928
PspPPI RGGWCCY 1 cut(s) 3928
PspXI VCTCGAGB 1 cut(s) 2436
PsrI GAACNNNNNNTAC 2 cut(s) 1394, 1426
PstNI CAGNNNCTG 1 cut(s) 1430
PsuI RGATCY 2 cut(s) 667, 886
PvuII CAGCTG 1 cut(s) 3428
RruI TCGCGA 1 cut(s) 275
RseI CAYNNNNRTG 4 cut(s) 998, 2705, 2753, 3584
SacI GAGCTC 2 cut(s) 168, 1566
SalI GTCGAC 2 cut(s) 82, 266
SapI GCTCTTC 3 cut(s) 1571, 1696, 2225
SaqAI TTAA 9 cut(s) 321, 579, 1679, 1752, 1764, 1815, 1919, 2592, 3972
Sau96I GGNCC 5 cut(s) 608, 1073, 1274, 2888, 3928
SchI GAGTC 6 cut(s) 516, 2227, 2250, 2448, 2504, 3628
SduI GDGCHC 6 cut(s) 168, 289, 463, 1566, 1735, 2060
SexAI ACCWGGT 1 cut(s) 827
SfaNI GCATC 8 cut(s) 210, 430, 889, 1310, 1816, 2722, 3377, 3969
SfcI CTRYAG 1 cut(s) 2673
Sfr274I CTCGAG 1 cut(s) 2436
SinI GGWCC 5 cut(s) 608, 1073, 1274, 2888, 3928
SlaI CTCGAG 1 cut(s) 2436
SmiMI CAYNNNNRTG 4 cut(s) 998, 2705, 2753, 3584
SpeI ACTAGT 1 cut(s) 86
SphI GCATGC 3 cut(s) 1578, 3100, 3174
SseBI AGGCCT 1 cut(s) 2293
SspI AATATT 1 cut(s) 3042
SstI GAGCTC 2 cut(s) 168, 1566
StuI AGGCCT 1 cut(s) 2293
StyI CCWWGG 4 cut(s) 2032, 2095, 2236, 3352
TaiI ACGT 9 cut(s) 120, 273, 690, 811, 960, 1048, 1474, 1758, 3489
TaqI TCGA 7 cut(s) 59, 83, 267, 533, 660, 944, 2437
TaqII GACCGA 1 cut(s) 2558
TatI WGTACW 3 cut(s) 1620, 1990, 3564
TauI GCSGC 7 cut(s) 8, 11, 139, 179, 1952, 2747, 3721
TfiI GAWTC 8 cut(s) 277, 414, 869, 1712, 1801, 1878, 1898, 1912
Tru1I TTAA 9 cut(s) 321, 579, 1679, 1752, 1764, 1815, 1919, 2592, 3972
Tru9I TTAA 9 cut(s) 321, 579, 1679, 1752, 1764, 1815, 1919, 2592, 3972
TscAI CASTG 4 cut(s) 639, 1740, 2284, 2779
TseFI GTSAC 4 cut(s) 688, 1360, 1531, 3803
Tsp45I GTSAC 4 cut(s) 688, 1360, 1531, 3803
TspGWI ACGGA 6 cut(s) 603, 1550, 1574, 2006, 3373, 3627
TspRI CASTG 4 cut(s) 639, 1740, 2284, 2779
Vha464I CTTAAG 2 cut(s) 320, 1678
VpaK11BI GGWCC 5 cut(s) 608, 1073, 1274, 2888, 3928
XapI RAATTY 3 cut(s) 707, 716, 1721
XbaI TCTAGA 1 cut(s) 854
XceI RCATGY 3 cut(s) 1578, 3100, 3174
XcmI CCANNNNNNNNNTGG 2 cut(s) 1891, 2704
XhoI CTCGAG 1 cut(s) 2436
XmiI GTMKAC 2 cut(s) 83, 267
XmnI GAANNNNTTC 2 cut(s) 3436, 3692
ZraI GACGTC 1 cut(s) 271
Zsp2I ATGCAT 4 cut(s) 445, 904, 3370, 3457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.