FvH4_3g29760

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
22859410 .. 22866693
7284 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29760.t1

Sequence Viewer

Length: 4332 bp
ATGGCGGCGGCAATGGCCGGAGAAGACTTAATGAGGCAGTCCAGCAGCCGGAGAAGCTGGCGATCGACAAGTGTCCGGGAAATGTGGAACGCTCCGGACGTGTTCCAGAGGAGCGTCCGGCAGCCGGCGTTGGATGAGGAGGAGGAGCTCAAGTGGGCCGCCATAGAGAGGTTGCCGACTTACGATAGGATGAGGAGAGGGATGTTGAGGAATGTGATGAGCAATGGAAGGGTTGTGGCTGAGGAAGTCGACGTTGCCCATCTTGGGGATTCTGATAAGAAGCAGCTGATGGAGAGCATACTTAAGGTTATTGAGGAGGACAATGAGAAGTTCTTGAAGAAGCTCAGAGCCAGAAATGACAGGGTCGGTATCGATATTCCTAAAGTTGAGGTTAGATTCCAGAATCTAGCAATAGAGGGAGATGCGTTTGTAGGCACCAGAGCACTTCCGACTCTTTGGAATTCCACCTTGAACGCAATAGAGGGAATACTGGGACTTGTTGGACTTTCACCATCGAAGAAAAGAATTGTTAAGATTCTACAAAATGTTAGTGGTATCGTCAAACCAGCAAGGATGACACTTCTTCTTGGACCTCCGGGGTCAGGAAAGACAACATTGCTAAAAGCACTATCTGGCAAACTAGATAGGGATCTTAGGGTAAATGGGAAGGTCACTTATTGCGGCCATGAATTCAATGAATTTGTACCTCAGAGAACCTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACACTTGATTTCTCTGGACGTTGCCTAGGAGTTGGAACAAGGTATGATATACTAGTAGAGTTGTCTAGACGGGAGAAAGATGCAGGCATCAAACCAGATCCTGGGATTGATGCATACATGAAAGCCACATCTGTGGCGGGACAGGAAACAAGTTTGATTACAGATTATATTCTCAAGATACTTGGATTAGATATCTGTGCTGATATAATGGTGGGTGATGACATGAGAAGGGGGATATCTGGTGGACAAAAGAAGCGTGTCACGACCGGAGAAATGTTGGTTGGACCAGCAAAAGCATTTTTCATGGATGAAATATCAACAGGGCTGGACAGTTCCACAACCTTTCAGATTATTAAATACATGAGACAGATGGTTCACATTTTGGATGTGTCAATGGTCATCGCTCTCTTGCAGCCCGCACCTGAGACGTACGATCTTTTTGATGATGTTATCCTTCTCTCGGAGGGTCAGATTGTTTATCAAGGCCCACGCGAGAATGTCCTCGAGTTCTTTGAATATATGGGATTCAAATGCCCTGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTTACCTCAAAGAAGGACCAAGAACAATACTGGTTTAAGAAGAACCAACCTTACAGATTAGTCACAGTAGATGATTTTGTTCGGGCGTTCAGCTCCTTCCATGTTGGCCAACGGCTTGGCGAAGAATTAAGAGTTTCTTATGACAAAAGACAAGCCCATCCTGCTGCTTTGGTTAAGGAAAAGTATGGAATTTCCAATATGGAGCTCTTCAAGGCATGCTTTGCAAGGGAATGGCTCTTAATGAAGCGGAACTCTTTTGTGTACATATTCAAAACTACACAGATTGCCATCATGGCTACAATTGCTTTGACAGTGTTCTTAAGAACGGAAATGAAATCTGGGAAAGAAGAATATTCAGCAAAATATTGGGGGGCACTGTTTTTCAGTCTCATTAATGTCATGTTTAATGGAATGACAGAGCTTGCCATGACAGTTTTCCGGCTTCCAGTGTTCTTTAAACAGAGGGATGCCTTGTTCTATCCAGCATGGGCATTTGCGTTGCCCATTTGGGTGACCAGAATTCCTGTTTCAGTGTTGGAATCTGCAATATGGATCATTTTTACCTATTACACCATAGGATTTGCACCTGATCCTAGTCGGTTCTTCAAACAGTTATTGGCTTTCATTGGTATAAGCCAGATGGCTCTCTCCCTCTTTCGTTTCATTGCAGCTCTTGGAAGATCAGATGTGGTTGCTAACACCATAGGTTCATTTACACTGCTATTGGTGTTTGTCCTGGGAGGTTATATTGTTGCTAAAGATGACATCCAGTCATGGATGATATGGGGCTACTATGTCTCACCTATGATGTATGGACAGAATGCAATTGCTATTAATGAATTTCTTGATGATAGATGGGGCGGCCCACCAGTCAACTCCACTCAGCCCACTGTTGGAAAAGCCCTTCTCAGAGAAAGAGGCCTGTACACTACAGAATCTTGGTATTGGATCTGTGTTGCAGCGCTTTTCGGGTTTTCTCTTATCTTCAATCTGATGTTCATTGCAGCATTGACCTACTTGAACCCTCTTGGCGACAACAAAACTCTACTTGGGGAGGATGACTCTGAAAACAAGAGGAGGCCACGATTGACAGAAGGTATTGATATGCAAGTGAGAAATGCAGAAGGAAGTTCAAACGTACAAGCCAAGAGAGGAATGGTGTTGCCGTTCCAGCCCCTTTCACTCGCTTTCAGCCATGTGAACTACTATGTGGATATGCCTGCGGAGATGAAGACCCAAGGTATTGAAGAGAACCGATTGCAGCTACTAAGAGATGTTAATGGGGCATTCAGGCCAGGGATTCTCACTGCATTAGTTGGTGTTAGTGGTGCTGGGAAAACTACTTTGATGGATGTCCTTGCTGGAAGAAAAACTGGTGGTTATATCGAAGGAAATATTAGCATCTCTGGATACCCAAAAAACCAAACCACATTTGCTCGGGTTAGCGGTTATTGTGAACAGAACGACATTCATTCACCGTATGTTACTGTTTATGAATCTCTGCTATACTCTGCCTGGTTACGTCTGTCTAAGGATGTCGACAAAAGCAAACGAAAGATGTTTGTTGATGAAGTTATGGACTTGGTGGAGCTTCACCCCTTGAGGAATGCTTTAGTTGGACTTCCTGGAGTTGATGGACTATCAACTGAACAAAGAAAGAGGCTGACCATTGCTGTAGAATTGGTTGCTAATCCTTCCATTATCTTTATGGATGAGCCAACATCAGGACTTGATGCTAGAGCCGCTGCAATTGTTATGCGTACTGTAAGAAACACAGTTGATACCGGTCGAACCGTTGTCTGCACCATTCACCAACCTAGCATTGATATTTTCGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGATTTATGCTGGACCGCTTGGTGACCGGTCTCACAAGCTTGTTGAATATTTTGAGGCCATTCCTGGGGTTCCAAAGATCAAAGATGGCTACAACCCTGCTACATGGATGTTAGAGGTCAGCTCTGCTGCAGTTGAGGCTCAAAATAACATTGATTTTGCCGAAGTATATGCGAACTCTGAGCTGTATAGGAGCGTTCAAGAACAGATCAAGGAACTGAGCACACCAGTCCCAGGCTCCAAGGACCTTTACTTCCCCACCCAATTCTCCCAAAGCTTCCCAACTCAATGCAAGGCTTGCTTTTGGAAACAACACTGGTCATACTGGAGGAACTCGCACTACAATGCCATCAGGTTTTTCAACACAATAGTCATCGGCTCTCTTTTTGGTGTCATCTTCTGGAACAAAGGAGACGTGCTACAAAAACAACAAGATATTGTTAACCTGTTGGGAGCAACCTATTCTGCTGTTCTCTTCCTTGGAGCGGGCAACGCTTCTTCTGTGCAATCTGTAGTTTCTATCGAGAGAACAGTTTTCTACCGAGAAAGAGCAGCAGGAATGTATTCCGAGTTGCCTTATGCATTTGCTCAGGTGGCCATTGAGACGGTTTATGTTGCCATACAAACCTTCATTTATTCCCTTCTTCTGTTCACTATGATCGGCTACGAATTCAAAATTGAGAAGTTCTTGTACTTCTACTACTTCATATTCATGTGTTTTACATACTTCTCTATGTATGGAATGATGGTGGTTGCCCTAACTCCTGGCCATCAAATCGCGGCAATTGTCATGTCCTTCTTCATGAGTTTCTGGAATTTGTTCTCTGGATTCCTTATTGCTAGACCGCTCATCCCAATATGGTGGAGGTGGTACTACTGGGGTTCTCCAGTTGCTTGGACAATCTACGGTGTCATTGCATCTCAATTCGGTGATCGGAACGATAAGATTATCCAAACTGCTGCAGGACATGTAAAAGTGGATGAATTCCTTAAGGCGACTTGGGGTTATGACCACGACTTCCTCATACCAGTTGTTGTTGCTCATGTTGGCTGGGTCCTCCTCTTCTTCTTTGTCTTTGCTTATGGTATCAAGTACCTTAACTTCCAGAGAAGATGA

Protein Analysis

1444

Amino Acids

163.6

Weight (kDa)

8.27

Isoelectric Point (pI)

39.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 106 - 154 1.9e-08 ABC-transporter N-terminal
ABC_tran PF00005 180 - 361 3.3e-15 ABC transporter
ABC2_membrane_7 PF19055 395 - 446 9e-06 ABC-2 type transporter
ABC2_membrane PF01061 516 - 728 1.1e-46 ABC-2 type transporter
PDR_assoc PF08370 738 - 795 8.9e-24 Plant PDR ABC transporter associated
ABC_tran PF00005 870 - 1022 1.4e-19 ABC transporter
ABC2_membrane PF01061 1167 - 1381 4e-53 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 434
AccB7I CCANNNNNTGG 1 cut(s) 872
AccBSI CCGCTC 2 cut(s) 3701, 4063
AccI GTMKAC 2 cut(s) 249, 2880
AccII CGCG 2 cut(s) 1263, 3995
AccIII TCCGGA 1 cut(s) 94
AclWI GGATC 5 cut(s) 657, 863, 1901, 1925, 2297
AcoI YGGCCR 5 cut(s) 15, 682, 1447, 3810, 3982
AcsI RAATTY 9 cut(s) 460, 689, 698, 1530, 1860, 2180, 3884, 4030, 4199
AfaI GTAC 9 cut(s) 705, 1202, 1604, 2267, 2481, 3103, 3908, 4088, 4310
AfeI AGCGCT 1 cut(s) 2304
AflII CTTAAG 3 cut(s) 302, 1660, 4205
AflIII ACRYGT 2 cut(s) 99, 4183
AgeI ACCGGT 2 cut(s) 3125, 3243
AhdI GACNNNNNGTC 1 cut(s) 2110
AhlI ACTAGT 1 cut(s) 823
AjiI CACGTC 2 cut(s) 100, 3631
AjnI CCWGG 8 cut(s) 871, 2076, 2635, 2855, 2965, 3280, 3448, 3979
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AleI CACNNNNGTG 1 cut(s) 902
AloI GAACNNNNNNTCC 2 cut(s) 1799, 1831
Alw21I GWGCWC 4 cut(s) 150, 445, 1548, 3440
Alw26I GTCTC 7 cut(s) 1129, 1190, 1733, 2143, 3252, 3621, 3812
AlwI GGATC 5 cut(s) 657, 863, 1901, 1925, 2297
AlwNI CAGNNNCTG 1 cut(s) 872
Ama87I CYCGRG 2 cut(s) 1274, 2778
Aor13HI TCCGGA 1 cut(s) 94
Aor51HI AGCGCT 1 cut(s) 2304
ApoI RAATTY 9 cut(s) 460, 689, 698, 1530, 1860, 2180, 3884, 4030, 4199
AseI ATTAAT 2 cut(s) 1734, 2175
AsiGI ACCGGT 2 cut(s) 3125, 3243
Asp700I GAANNNNTTC 2 cut(s) 3778, 4034
AspA2I CCTAGG 1 cut(s) 796
AspLEI GCGC 1 cut(s) 2305
AspS9I GGNCC 9 cut(s) 156, 590, 1055, 1256, 1357, 2204, 3230, 3460, 4270
AsuC2I CCSGG 2 cut(s) 77, 597
AsuII TTCGAA 1 cut(s) 3174
AvaI CYCGRG 2 cut(s) 1274, 2778
AvaII GGWCC 6 cut(s) 590, 1055, 1357, 3230, 3460, 4270
AvrII CCTAGG 1 cut(s) 796
BaeGI GKGCMC 1 cut(s) 1717
BalI TGGCCA 3 cut(s) 1449, 3812, 3984
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 2 cut(s) 150, 1548
BarI GAAGNNNNNNTAC 3 cut(s) 3890, 3922, 4301
BbsI GAAGAC 2 cut(s) 30, 2579
Bbv12I GWGCWC 4 cut(s) 150, 445, 1548, 3440
BbvCI CCTCAGC 1 cut(s) 240
BceAI ACGGC 2 cut(s) 1469, 2491
BcgI CGANNNNNNTGC 2 cut(s) 3368, 3402
BciT130I CCWGG 8 cut(s) 873, 2078, 2637, 2857, 2967, 3282, 3450, 3981
BciVI GTATCC 1 cut(s) 2744
BcnI CCSGG 2 cut(s) 77, 597
BcoDI GTCTC 7 cut(s) 1129, 1190, 1733, 2143, 3252, 3621, 3812
BcuI ACTAGT 1 cut(s) 823
BfaI CTAG 9 cut(s) 407, 641, 797, 824, 837, 1935, 3078, 3159, 4056
BfmI CTRYAG 5 cut(s) 2271, 3015, 3345, 3726, 4176
BfoI RGCGCY 1 cut(s) 2306
BfrI CTTAAG 3 cut(s) 302, 1660, 4205
BfuI GTATCC 1 cut(s) 2744
BglI GCCNNNNNGGC 1 cut(s) 1634
BlnI CCTAGG 1 cut(s) 796
Bme18I GGWCC 6 cut(s) 590, 1055, 1357, 3230, 3460, 4270
BmeRI GACNNNNNGTC 1 cut(s) 2110
BmeT110I CYCGRG 2 cut(s) 1274, 2778
BmgBI CACGTC 2 cut(s) 100, 3631
BmgT120I GGNCC 9 cut(s) 156, 590, 1055, 1256, 1357, 2204, 3230, 3460, 4270
BmiI GGNNCC 4 cut(s) 436, 3288, 3454, 4271
BmrI ACTGGG 2 cut(s) 500, 4102
BmsI GCATC 8 cut(s) 412, 841, 867, 871, 1798, 2751, 3064, 4142
BmuI ACTGGG 2 cut(s) 500, 4102
BoxI GACNNNNGTC 1 cut(s) 71
BpiI GAAGAC 2 cut(s) 30, 2579
BplI GAGNNNNNCTC 4 cut(s) 2387, 2419, 3323, 3355
BpmI CTGGAG 3 cut(s) 2988, 3562, 4086
Bpu10I CCTNAGC 2 cut(s) 240, 3804
Bpu14I TTCGAA 1 cut(s) 3174
BpuEI CTTGAG 3 cut(s) 134, 929, 2962
BpuMI CCSGG 2 cut(s) 77, 597
Bsa29I ATCGAT 1 cut(s) 372
BsaBI GATNNNNATC 2 cut(s) 648, 1628
BsaI GGTCTC 1 cut(s) 3252
BsaWI WCCGGW 4 cut(s) 94, 1037, 3125, 3243
BsaXI ACNNNNNCTCC 4 cut(s) 137, 167, 3201, 3231
Bse118I RCCGGY 3 cut(s) 124, 3125, 3243
Bse3DI GCAATG 7 cut(s) 18, 229, 614, 2004, 2340, 3009, 4128
Bse8I GATNNNNATC 2 cut(s) 648, 1628
BseAI TCCGGA 1 cut(s) 94
BseBI CCWGG 8 cut(s) 873, 2078, 2637, 2857, 2967, 3282, 3450, 3981
BseCI ATCGAT 1 cut(s) 372
BseJI GATNNNNATC 2 cut(s) 648, 1628
BseMI GCAATG 7 cut(s) 18, 229, 614, 2004, 2340, 3009, 4128
BseMII CTCAG 9 cut(s) 231, 358, 722, 1185, 2237, 2263, 3387, 3425, 3818
BseRI GAGGAG 9 cut(s) 124, 152, 155, 158, 208, 329, 2431, 3222, 4265
BseSI GKGCMC 1 cut(s) 1717
BseYI CCCAGC 2 cut(s) 2672, 4266
BsgI GTGCAG 1 cut(s) 3127
Bsh1236I CGCG 2 cut(s) 1263, 3995
Bsh1285I CGRYCG 3 cut(s) 65, 1038, 3130
BshNI GGYRCC 1 cut(s) 434
BshTI ACCGGT 2 cut(s) 3125, 3243
BshVI ATCGAT 1 cut(s) 372
BsiEI CGRYCG 3 cut(s) 65, 1038, 3130
BsiHKAI GWGCWC 4 cut(s) 150, 445, 1548, 3440
BsiHKCI CYCGRG 2 cut(s) 1274, 2778
BsiWI CGTACG 1 cut(s) 1200
BslFI GGGAC 3 cut(s) 507, 924, 3431
BsmAI GTCTC 7 cut(s) 1129, 1190, 1733, 2143, 3252, 3621, 3812
BsmBI CGTCTC 3 cut(s) 1190, 3621, 3812
BsmFI GGGAC 3 cut(s) 507, 924, 3431
BsmI GAATGC 3 cut(s) 2167, 2627, 2953
Bso31I GGTCTC 1 cut(s) 3252
BsoBI CYCGRG 2 cut(s) 1274, 2778
Bsp119I TTCGAA 1 cut(s) 3174
Bsp1286I GDGCHC 5 cut(s) 150, 445, 1548, 1717, 3440
Bsp13I TCCGGA 1 cut(s) 94
Bsp1407I TGTACA 2 cut(s) 1602, 2265
BspCNI CTCAG 9 cut(s) 232, 357, 721, 1186, 2236, 2262, 3388, 3426, 3817
BspDI ATCGAT 1 cut(s) 372
BspEI TCCGGA 1 cut(s) 94
BspFNI CGCG 2 cut(s) 1263, 3995
BspHI TCATGA 1 cut(s) 4017
BspLI GGNNCC 4 cut(s) 436, 3288, 3454, 4271
BspMAI CTGCAG 2 cut(s) 3349, 4180
BspPI GGATC 5 cut(s) 657, 863, 1901, 1925, 2297
BspQI GCTCTTC 1 cut(s) 1553
BspT104I TTCGAA 1 cut(s) 3174
BspT107I GGYRCC 1 cut(s) 434
BspTI CTTAAG 3 cut(s) 302, 1660, 4205
BspTNI GGTCTC 1 cut(s) 3252
BsrBI CCGCTC 2 cut(s) 3701, 4063
BsrDI GCAATG 7 cut(s) 18, 229, 614, 2004, 2340, 3009, 4128
BsrFI RCCGGY 3 cut(s) 124, 3125, 3243
BsrGI TGTACA 2 cut(s) 1602, 2265
BssAI RCCGGY 3 cut(s) 124, 3125, 3243
BssT1I CCWWGG 4 cut(s) 796, 2578, 3456, 3694
Bst2UI CCWGG 8 cut(s) 873, 2078, 2637, 2857, 2967, 3282, 3450, 3981
Bst6I CTCTTC 4 cut(s) 1553, 2583, 3695, 4283
BstAFI CTTAAG 3 cut(s) 302, 1660, 4205
BstAPI GCANNNNNTGC 2 cut(s) 1562, 3513
BstAUI TGTACA 2 cut(s) 1602, 2265
BstBI TTCGAA 1 cut(s) 3174
BstEII GGTNACC 2 cut(s) 1852, 3239
BstFNI CGCG 2 cut(s) 1263, 3995
BstH2I RGCGCY 1 cut(s) 2306
BstHHI GCGC 1 cut(s) 2305
BstMAI GTCTC 7 cut(s) 1129, 1190, 1733, 2143, 3252, 3621, 3812
BstMCI CGRYCG 3 cut(s) 65, 1038, 3130
BstNI CCWGG 8 cut(s) 873, 2078, 2637, 2857, 2967, 3282, 3450, 3981
BstNSI RCATGY 2 cut(s) 1560, 4187
BstPAI GACNNNNGTC 1 cut(s) 71
BstPI GGTNACC 2 cut(s) 1852, 3239
BstSFI CTRYAG 5 cut(s) 2271, 3015, 3345, 3726, 4176
BstSLI GKGCMC 1 cut(s) 1717
BstUI CGCG 2 cut(s) 1263, 3995
BstV2I GAAGAC 2 cut(s) 30, 2579
BstX2I RGATCY 3 cut(s) 649, 868, 2289
BstXI CCANNNNNNTGG 4 cut(s) 904, 1457, 4077, 4110
BstYI RGATCY 3 cut(s) 649, 868, 2289
Bsu15I ATCGAT 1 cut(s) 372
BsuI GTATCC 1 cut(s) 2744
BsuTUI ATCGAT 1 cut(s) 372
BtgZI GCGATG 1 cut(s) 1156
BtrI CACGTC 2 cut(s) 100, 3631
BtsI GCAGTG 2 cut(s) 2057, 2646
BtsIMutI CAGTG 8 cut(s) 1659, 1715, 1794, 1878, 2057, 2229, 2646, 3529
CaiI CAGNNNCTG 1 cut(s) 872
CciI TCATGA 1 cut(s) 4017
CfoI GCGC 1 cut(s) 2305
Cfr10I RCCGGY 3 cut(s) 124, 3125, 3243
Cfr13I GGNCC 9 cut(s) 156, 590, 1055, 1256, 1357, 2204, 3230, 3460, 4270
ClaI ATCGAT 1 cut(s) 372
CseI GACGC 1 cut(s) 103
Csp6I GTAC 9 cut(s) 704, 1201, 1603, 2266, 2480, 3102, 3907, 4087, 4309
CspAI ACCGGT 2 cut(s) 3125, 3243
CviQI GTAC 9 cut(s) 704, 1201, 1603, 2266, 2480, 3102, 3907, 4087, 4309
DraI TTTAAA 1 cut(s) 1798
DriI GACNNNNNGTC 1 cut(s) 2110
EaeI YGGCCR 5 cut(s) 15, 682, 1447, 3810, 3982
Eam1104I CTCTTC 4 cut(s) 1553, 2583, 3695, 4283
Eam1105I GACNNNNNGTC 1 cut(s) 2110
EarI CTCTTC 4 cut(s) 1553, 2583, 3695, 4283
Ecl136II GAGCTC 2 cut(s) 148, 1546
Eco130I CCWWGG 4 cut(s) 796, 2578, 3456, 3694
Eco147I AGGCCT 1 cut(s) 2262
Eco24I GRGCYC 2 cut(s) 150, 1548
Eco31I GGTCTC 1 cut(s) 3252
Eco32I GATATC 2 cut(s) 964, 1008
Eco47I GGWCC 6 cut(s) 590, 1055, 1357, 3230, 3460, 4270
Eco47III AGCGCT 1 cut(s) 2304
Eco53kI GAGCTC 2 cut(s) 148, 1546
Eco88I CYCGRG 2 cut(s) 1274, 2778
Eco91I GGTNACC 2 cut(s) 1852, 3239
EcoICRI GAGCTC 2 cut(s) 148, 1546
EcoO109I RGGNCCY 2 cut(s) 3460, 4270
EcoO65I GGTNACC 2 cut(s) 1852, 3239
EcoRI GAATTC 5 cut(s) 460, 689, 1860, 3884, 4199
EcoRII CCWGG 8 cut(s) 871, 2076, 2635, 2855, 2965, 3280, 3448, 3979
EcoRV GATATC 2 cut(s) 964, 1008
EcoT14I CCWWGG 4 cut(s) 796, 2578, 3456, 3694
EcoT22I ATGCAT 2 cut(s) 886, 3799
EcoT38I GRGCYC 2 cut(s) 150, 1548
ErhI CCWWGG 4 cut(s) 796, 2578, 3456, 3694
Esp3I CGTCTC 3 cut(s) 1190, 3621, 3812
FalI AAGNNNNNCTT 6 cut(s) 1462, 1494, 1544, 1576, 3500, 3532
FaqI GGGAC 3 cut(s) 507, 924, 3431
FauI CCCGC 3 cut(s) 901, 1195, 3694
FblI GTMKAC 2 cut(s) 249, 2880
FriOI GRGCYC 2 cut(s) 150, 1548
FspBI CTAG 9 cut(s) 407, 641, 797, 824, 837, 1935, 3078, 3159, 4056
GlaI GCGC 1 cut(s) 2304
GsaI CCCAGC 2 cut(s) 2676, 4270
GsuI CTGGAG 3 cut(s) 2988, 3562, 4086
HaeII RGCGCY 1 cut(s) 2306
HgaI GACGC 1 cut(s) 103
HhaI GCGC 1 cut(s) 2305
Hin6I GCGC 1 cut(s) 2303
HinP1I GCGC 1 cut(s) 2303
HincII GTYRAC 4 cut(s) 250, 2215, 2881, 3658
HindII GTYRAC 4 cut(s) 250, 2215, 2881, 3658
HindIII AAGCTT 3 cut(s) 3177, 3254, 3490
HpaI GTTAAC 1 cut(s) 3658
Hpy99I CGWCG 1 cut(s) 254
HpyCH4IV ACGT 7 cut(s) 99, 252, 790, 1199, 2478, 2863, 3630
HpySE526I ACGT 7 cut(s) 99, 252, 790, 1199, 2478, 2863, 3630
HspAI GCGC 1 cut(s) 2303
Kpn2I TCCGGA 1 cut(s) 94
KroI GCCGGC 1 cut(s) 124
KroNI GCCGGC 1 cut(s) 126
KspAI GTTAAC 1 cut(s) 3658
LguI GCTCTTC 1 cut(s) 1553
LweI GCATC 8 cut(s) 412, 841, 867, 871, 1798, 2751, 3064, 4142
MaeI CTAG 9 cut(s) 407, 641, 797, 824, 837, 1935, 3078, 3159, 4056
MaeII ACGT 7 cut(s) 99, 252, 790, 1199, 2478, 2863, 3630
MaeIII GTNAC 8 cut(s) 670, 1030, 1342, 1402, 1852, 2824, 2859, 3239
MbiI CCGCTC 2 cut(s) 3701, 4063
MfeI CAATTG 4 cut(s) 1641, 2166, 3090, 3999
MflI RGATCY 3 cut(s) 649, 868, 2289
MhlI GDGCHC 5 cut(s) 150, 445, 1548, 1717, 3440
MlsI TGGCCA 3 cut(s) 1449, 3812, 3984
MluNI TGGCCA 3 cut(s) 1449, 3812, 3984
MlyI GAGTC 2 cut(s) 445, 2396
MmeI TCCRAC 8 cut(s) 111, 473, 481, 784, 1033, 1857, 2215, 2938
Mox20I TGGCCA 3 cut(s) 1449, 3812, 3984
Mph1103I ATGCAT 2 cut(s) 886, 3799
MroI TCCGGA 1 cut(s) 94
MroNI GCCGGC 1 cut(s) 124
MroXI GAANNNNTTC 2 cut(s) 3778, 4034
MscI TGGCCA 3 cut(s) 1449, 3812, 3984
MslI CAYNNNNRTG 5 cut(s) 750, 902, 1850, 3558, 3926
Msp20I TGGCCA 3 cut(s) 1449, 3812, 3984
MspA1I CMGCKG 2 cut(s) 286, 3086
MspCI CTTAAG 3 cut(s) 302, 1660, 4205
MunI CAATTG 4 cut(s) 1641, 2166, 3090, 3999
Mva1269I GAATGC 3 cut(s) 2167, 2627, 2953
MvaI CCWGG 8 cut(s) 873, 2078, 2637, 2857, 2967, 3282, 3450, 3981
MvnI CGCG 2 cut(s) 1263, 3995
NaeI GCCGGC 1 cut(s) 126
NciI CCSGG 2 cut(s) 77, 597
NgoMIV GCCGGC 1 cut(s) 124
NlaIV GGNNCC 4 cut(s) 436, 3288, 3454, 4271
NmuCI GTSAC 5 cut(s) 670, 1030, 1402, 1852, 3239
NsiI ATGCAT 2 cut(s) 886, 3799
NspI RCATGY 2 cut(s) 1560, 4187
NspV TTCGAA 1 cut(s) 3174
OliI CACNNNNGTG 1 cut(s) 902
PaeI GCATGC 1 cut(s) 1560
PaeR7I CTCGAG 1 cut(s) 1274
PagI TCATGA 1 cut(s) 4017
PceI AGGCCT 1 cut(s) 2262
PciI ACATGT 1 cut(s) 4183
PciSI GCTCTTC 1 cut(s) 1553
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 3 cut(s) 2167, 2627, 2953
PdiI GCCGGC 1 cut(s) 126
PdmI GAANNNNTTC 2 cut(s) 3778, 4034
Pfl23II CGTACG 1 cut(s) 1200
PflFI GACNNNGTC 1 cut(s) 362
PflMI CCANNNNNTGG 1 cut(s) 872
PfoI TCCNGGA 2 cut(s) 75, 2965
PinAI ACCGGT 2 cut(s) 3125, 3243
Ple19I CGATCG 1 cut(s) 65
PleI GAGTC 2 cut(s) 445, 2396
PpsI GAGTC 2 cut(s) 445, 2396
PpuMI RGGWCCY 2 cut(s) 3460, 4270
PscI ACATGT 1 cut(s) 4183
PshAI GACNNNNGTC 1 cut(s) 71
PshBI ATTAAT 2 cut(s) 1734, 2175
Psp124BI GAGCTC 2 cut(s) 150, 1548
Psp5II RGGWCCY 2 cut(s) 3460, 4270
Psp6I CCWGG 8 cut(s) 871, 2076, 2635, 2855, 2965, 3280, 3448, 3979
PspEI GGTNACC 2 cut(s) 1852, 3239
PspFI CCCAGC 2 cut(s) 2672, 4266
PspGI CCWGG 8 cut(s) 871, 2076, 2635, 2855, 2965, 3280, 3448, 3979
PspLI CGTACG 1 cut(s) 1200
PspN4I GGNNCC 4 cut(s) 436, 3288, 3454, 4271
PspPI GGNCC 9 cut(s) 156, 590, 1055, 1256, 1357, 2204, 3230, 3460, 4270
PspPPI RGGWCCY 2 cut(s) 3460, 4270
PspXI VCTCGAGB 1 cut(s) 1274
PsrI GAACNNNNNNTAC 4 cut(s) 1376, 1408, 3539, 3571
PstI CTGCAG 2 cut(s) 3349, 4180
PstNI CAGNNNCTG 1 cut(s) 872
PsuI RGATCY 3 cut(s) 649, 868, 2289
PsyI GACNNNGTC 1 cut(s) 362
PvuI CGATCG 1 cut(s) 65
PvuII CAGCTG 1 cut(s) 286
RsaI GTAC 9 cut(s) 705, 1202, 1604, 2267, 2481, 3103, 3908, 4088, 4310
RsaNI GTAC 9 cut(s) 704, 1201, 1603, 2266, 2480, 3102, 3907, 4087, 4309
RseI CAYNNNNRTG 5 cut(s) 750, 902, 1850, 3558, 3926
SacI GAGCTC 2 cut(s) 150, 1548
SalI GTCGAC 2 cut(s) 248, 2879
SapI GCTCTTC 1 cut(s) 1553
Sau96I GGNCC 9 cut(s) 156, 590, 1055, 1256, 1357, 2204, 3230, 3460, 4270
SchI GAGTC 2 cut(s) 445, 2396
SduI GDGCHC 5 cut(s) 150, 445, 1548, 1717, 3440
SfaNI GCATC 8 cut(s) 412, 841, 867, 871, 1798, 2751, 3064, 4142
SfcI CTRYAG 5 cut(s) 2271, 3015, 3345, 3726, 4176
Sfr274I CTCGAG 1 cut(s) 1274
SfuI TTCGAA 1 cut(s) 3174
SinI GGWCC 6 cut(s) 590, 1055, 1357, 3230, 3460, 4270
SlaI CTCGAG 1 cut(s) 1274
SmiMI CAYNNNNRTG 5 cut(s) 750, 902, 1850, 3558, 3926
SmlI CTYRAG 7 cut(s) 149, 302, 944, 1274, 1660, 2941, 4205
SmoI CTYRAG 7 cut(s) 149, 302, 944, 1274, 1660, 2941, 4205
SpeI ACTAGT 1 cut(s) 823
SphI GCATGC 1 cut(s) 1560
SseBI AGGCCT 1 cut(s) 2262
SspI AATATT 4 cut(s) 1694, 1706, 2737, 3266
SspMI CTAG 9 cut(s) 407, 641, 797, 824, 837, 1935, 3078, 3159, 4056
SstI GAGCTC 2 cut(s) 150, 1548
StuI AGGCCT 1 cut(s) 2262
StyI CCWWGG 4 cut(s) 796, 2578, 3456, 3694
TaiI ACGT 7 cut(s) 102, 255, 793, 1202, 2481, 2866, 3633
TatI WGTACW 3 cut(s) 1602, 2265, 3906
TauI GCSGC 7 cut(s) 8, 11, 161, 684, 2205, 3086, 3998
TscAI CASTG 8 cut(s) 1659, 1722, 1794, 1878, 2064, 2236, 2653, 3536
TseFI GTSAC 5 cut(s) 670, 1030, 1402, 1852, 3239
Tsp45I GTSAC 5 cut(s) 670, 1030, 1402, 1852, 3239
TspGWI ACGGA 1 cut(s) 1682
TspRI CASTG 8 cut(s) 1659, 1722, 1794, 1878, 2064, 2236, 2653, 3536
Tth111I GACNNNGTC 1 cut(s) 362
Van91I CCANNNNNTGG 1 cut(s) 872
Vha464I CTTAAG 3 cut(s) 302, 1660, 4205
VpaK11BI GGWCC 6 cut(s) 590, 1055, 1357, 3230, 3460, 4270
VspI ATTAAT 2 cut(s) 1734, 2175
XapI RAATTY 9 cut(s) 460, 689, 698, 1530, 1860, 2180, 3884, 4030, 4199
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 2 cut(s) 1560, 4187
XcmI CCANNNNNNNNNTGG 2 cut(s) 2494, 3046
XhoI CTCGAG 1 cut(s) 1274
XmaJI CCTAGG 1 cut(s) 796
XmiI GTMKAC 2 cut(s) 249, 2880
XmnI GAANNNNTTC 2 cut(s) 3778, 4034
XspI CTAG 9 cut(s) 407, 641, 797, 824, 837, 1935, 3078, 3159, 4056
Zsp2I ATGCAT 2 cut(s) 886, 3799
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.