Rw5G033940

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
57941085 .. 57948385
7301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G033940.1

Sequence Viewer

Length: 4272 bp
ATGGCGGCGGCATTGGCCGGAGAAGACTTAATGAGGCAGTCGAGCAGCAGGAGCAGTCGGAGCAGCTGGCGGTCGACGAGTGTCCGGGAAATGTGGAACGCACCGGACGTGTTCCAGCGGAGCGGGCGGCAGCAGACGGTGGACGAGGAGGAGGAGCTCAAGTGGGCCGCCATCGAGCGGTTGCCGACTTATGATAGGATGAGGAGAGGCATGTTGAGGAATGTTATGAGCAATGGGAGGGTTGTAAATGAAGAAGTTGATGTTGCGAATCTTGGGGATCAAGATAAGAGGCAGTTGATGGAGAGCATACTCAAGGTTGTTGAGGATGATAATGAGAGGTTCTTGCAGAGACTCAGAGCCAGAAATGACAGAGTTGGGATTGATATTCCTAGAGTTGAAGTTAGATACGAGAACATATCTATTGAGGGAGATGCGTTCGTAGGAACCAGAGCACTTCCAACGCTGTGGAATTCCACCTTAAACGCACTAGAGGCTTTAATTGGATTGGTTGGACTCTCACCGTCGAAGAAAAGAGTTGTCAAGATACTTCAAGATGTGAGCGGTATTGTGAAACCATCGAGGATGACACTACTTCTTGGACCTCCTGCATCCGGAAAAACAACACTGCTAAAAGCACTTGCTGGCAAACTTGATAAAGATCTAAGGGTAAATGGGAAGGTAACCTACTGTGGCCATGAATTTAAGGAATTTGTTCCTCAGAGGACCTCTGCTTACATTAGTCAGCATGATCTGCACTATGGTGAGATGACAGTTCGTGAAACATTGACTTCTCCGGACTTGTCTAGAAGGGAGAAAGATTCGGGTATCAAACCAGATGCTGAGATTGATGCATTCATGAAAGCCACATCCATGTCAGGCCAGGAAACTAGTTTGATCACAGATTACGTTCTCAAGATACTTGGGTTAGATATCTGTGCTGATATAATGGTGGGAGATGACATGAGGAGAGGAATATCTGGTGGACAGAAGAAACGTGTAACTACTGGAGAAATGTTGGTTGGACCAGCAAAAGCATTTTTCATGGACGAAATATCAACGGGGCTGGACAGTTCCACGACCTTCCAGATTGTCAAATTCATGAGGCAGATGGTTCATATTATGGATGTGACAATGGTCATCTCTCTCTTGCAGCCTGCACCTGAGACATATGACCTTTTCGATGAAATTATCCTTCTTTCTGAGGGACAGATTGTCTACCAAGGCCCCCGTGAGAATGTTCTTGAATTCTTTGAGTACATGGGATTCAAATGCCCAGACAGAAAAGGTGTTGCAGATTTTTTGCAAGAAGTGACCTCAAAGAAGGATCAAGAACAGTACTGGTTTAAGAAGAACCAACCTTACAGATATGTTTCAGTACCTGATTTTGCACGAGCTTTCACCTCTTTCCATGTTGGCCAACGGCTCGTTGAAGAACTAAGAGTTCCGTATGACAAAAGAACTGCCCATCCGGCTGCCTTGGTGAAGGAAAAGTATGGAATATCCAATATGGAGCTCTTTAAGGCATGCTTTGCAAGAGAATGGCTGCTGATGAAGCGAAACTCTTTTGTGTACATCTTCAAGACTACTCAGATTACAATCATGGCTACCATTGCATTGACGGTATTCTTAAGAACTGAAATGAAAGCTGGGTCAGAAGCTGATTCAGCAAAATTTTGGGGGGCACTATTTTTCAGTCTCATCAATGTCATGTTTAATGGAATGGCGGAACTTGCAATGACAGTATTCAGGCTTCCTGTGTACTTTAAACAAAGGGATGCCTTGTTCTACCCTGGCTGGGCTTTTGGATTGCCTATTTGGCTAACCAGAATTCCAATTTCATTGATGGAATCTGCAATCTGGATCATCTTTACATACTACACCATTGGATTTGCACCTGCTGCCAGTCGGTTTTTCAAGCAGTTCTTGGCTTTCTTTGGTATACATCAGATGGCACTTTCCCTTTTCCGTTTTATTGCAGCACTTGGAAGAACAGAGGTTGTTGCAAACACCATTGGTTCATTTACATTGCTAATGGTGTTCGTCCTTGGAGGTTTTATTGTTGCTAAAGATGACATTGATTCATGGATGATATGGGGCTACTATGTTTCACCTATGATGTATGGCCAAAATGCCATTGCTATCAATGAATTTCTGGATAAAAGATGGAGCGCTCCTCTCGTCAATCAAAGTGAACCCACAGTCGGGAAGCTACTTCTCAAGCAAAGAGGCCTTTATACTGAAGAATATTGGTATTGGATTTGTATTGGAGCGCTTTTTGGCTTCTCTCTTCTCTTCAATGTTCTTTTCATCGCTGCACTGACCTTCTTGAATCCTCTTGGGGATACTAAAACTCTAATTGAAACTGATGACTCGCAAAGCAATAAGAAGCGACGATCCAATCCAGAAGGTACTGATATGCAAGTGAGAAATGGTCCAGCCAAAAAAGGAATGGTTTTGCCATTCCAGCCCTTGTCACTTGCTTTTAACCATGTGAACTACTACGTAGATATGCCTGCTGAAATGAAGACTCAAGGGGTTGAAGAGACCAGACTACAACTCCTACGTGATATTAGTGGTGCATTTAGGCCAGGTGTTTTGACTGCATTGGTTGGTGTCAGTGGTGCCGGAAAGACTACCCTAATGGATGTGTTAGCCGGAAGAAAGACAGGCGGGTACATTGAAGGAAGTATTAGAATCTCTGGTTACCCAAAGAATCAAGCCACATTTGCTAGGGTCAGCGGTTACTGTGAACAAAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTCCTATACTCAGCCTGGCTGCGTCTTTCTAAAGATGTCAAGAAGGGAACACGGAAGGTATGTTATGGACTTGTTGAGCTCAATCCTTTGAGGAATGCTTTAGTTGGACTTCCAGGAGTTGATGGGCTCTCAACTGAACAAAGAAAGAGGCTCACCATTGCTGTGGAATTGGTTGCAAATCCTTCCATCATCTTTATGGATGAGCCAACCTCAGGTCTTGATGCTAGAGCAGCCGCAATTGTTATGCGTACTGTAAGAAACACAGTTGATACAGGACGAACCGTTGTTTGCACAATTCACCAACCTAGCATTGACATTTTTGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGACTTATGCTGGGCCTCTAGGTCGCCAATCTCACAAGCTTGTTGAATATTTTGAGGCTATTCCAGGGGTTCCCAAGATCAAAGAGGGTTACAATCCTGCTACATGGATGTTGGAGGTCAGCTCTGCTGCGGTTGAGACCCAACTAAACATCGACTTCGCAGAGATATATGCAAACTCAGAACTCTACAAGAGAAATCAGGACCTTATCAAGGAACTAAGCACGCCTCAACCAGGGACCAAGGACCTTTACTTCCCCACCCGGTACTCCCAAACCTTTTTAACTCAGTGCAAGGCTTGCTTCTGGAAACAGCACTGGTCATACTGGAGGAACTCACGGTACAACGCCATTAGGTTTTTCATGACGGTTTGCATTGGCATATTATTCGGTGTAATCTTCTGGAGCAAAGGAGACCAAATAAACAAACAACAAGACCTGATCAATCTTTTGGGAGCTACCTATGCTGCTGTTCTTTTCCTCGGAGCTAGCAATGCCTCTGCCGTGCAATCTGTAGTGGCAGTTGAGCGAACAGTTTTCTACCGTGAAAGAGCTGCAGGAATGTACTCAGAGTTGCCTTATGCTTTTGCTCAGGTGGCTATTGAGACTATTTACGTTGCAATCCAAACCTTTGTGTATTCCTGTCTTCTGTATTCTATGATCGGGTACAACTGGAAGGTGGAGAAATTTTTGTACTTCTACTACTTCATTTTCATGTGCTTTACCTACTTCTCAATGTACGGGATGATGGTGGTTGCCCTAACTCCTGGCCATCAAATTGCTGCAATTGTCATGTCTTTCTTCATGAGCTTCTGGAACTTGTTCTCTGGTTTCCTCATCCCTAGACCGCTTATCCCCATCTGGTGGAGGTGGTATTACTGGGGTTCTCCAGTTGCTTGGACCATCTATGGCATCTTCGGATCTCAAGTTGGTGACTTGAAGAAGGAGATTGACTTGCCTACCGGAGGAAAACAAGCAGTGAATGTTTTCCTCAAGGAGTATTTGGGTTATGACTATGACTTCCTCATTCCTGTAGTGGTTGCTCATGTTGGTTGGGTCCTCCTCTTCTTCTTTGTCTTTGCCTACGGTATCAAGTACCTTAACTTCCAAAGGAGATAA

Protein Analysis

1423

Amino Acids

161.72

Weight (kDa)

8.83

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 109 - 157 9.3e-07 ABC-transporter N-terminal
ABC_tran PF00005 183 - 350 3.5e-14 ABC transporter
ABC2_membrane PF01061 505 - 717 5.5e-46 ABC-2 type transporter
PDR_assoc PF08370 722 - 786 5.9e-26 Plant PDR ABC transporter associated
ABC_tran PF00005 854 - 1002 1.1e-17 ABC transporter
ABC2_membrane PF01061 1147 - 1359 4.9e-55 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1903
Acc36I ACCTGC 1 cut(s) 1903
AccB1I GGYRCC 1 cut(s) 2621
AccB7I CCANNNNNTGG 1 cut(s) 4017
AccBSI CCGCTC 3 cut(s) 123, 178, 561
AccI GTMKAC 3 cut(s) 74, 1215, 1939
AccIII TCCGGA 2 cut(s) 611, 793
AclWI GGATC 5 cut(s) 285, 1332, 1868, 2388, 4081
AcoI YGGCCR 5 cut(s) 15, 691, 1414, 2122, 3922
AcsI RAATTY 9 cut(s) 469, 698, 707, 1094, 1244, 1670, 1827, 2147, 3839
AcuI CTGAAG 1 cut(s) 2259
AfeI AGCGCT 2 cut(s) 2170, 2271
AflII CTTAAG 1 cut(s) 1627
AflIII ACRYGT 2 cut(s) 108, 994
AhdI GACNNNNNGTC 1 cut(s) 1211
AhlI ACTAGT 1 cut(s) 887
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 8 cut(s) 879, 1789, 2587, 2807, 2905, 3220, 3388, 3919
AjuI GAANNNNNNNTTGG 2 cut(s) 1002, 1034
AleI CACNNNNGTG 1 cut(s) 759
AloI GAACNNNNNNTCC 4 cut(s) 1450, 1482, 1766, 1798
Alw21I GWGCWC 4 cut(s) 159, 454, 1515, 2874
Alw26I GTCTC 7 cut(s) 343, 1157, 1700, 2537, 3287, 3561, 3752
AlwI GGATC 5 cut(s) 285, 1332, 1868, 2388, 4081
AlwNI CAGNNNCTG 3 cut(s) 839, 1379, 1658
Aor13HI TCCGGA 2 cut(s) 611, 793
Aor51HI AGCGCT 2 cut(s) 2170, 2271
ApoI RAATTY 9 cut(s) 469, 698, 707, 1094, 1244, 1670, 1827, 2147, 3839
Asp700I GAANNNNTTC 3 cut(s) 711, 3974, 4139
AspLEI GCGC 2 cut(s) 2171, 2272
AsuC2I CCSGG 2 cut(s) 86, 3418
AsuHPI GGTGA 9 cut(s) 510, 773, 1390, 1492, 2100, 2760, 2938, 3083, 4097
AsuNHI GCTAGC 1 cut(s) 3641
AvaII GGWCC 9 cut(s) 599, 723, 1022, 2432, 3358, 3393, 3400, 4053, 4210
AxyI CCTNAGG 1 cut(s) 3004
BaeGI GKGCMC 1 cut(s) 1684
BaeI ACNNNNGTAYC 2 cut(s) 908, 941
BalI TGGCCA 4 cut(s) 693, 1416, 2124, 3924
BanI GGYRCC 1 cut(s) 2621
BanII GRGCYC 4 cut(s) 159, 1515, 2874, 2922
BarI GAAGNNNNNNTAC 5 cut(s) 668, 700, 1734, 1766, 4241
BauI CACGAG 1 cut(s) 1389
BbsI GAAGAC 3 cut(s) 30, 2531, 3791
Bbv12I GWGCWC 4 cut(s) 159, 454, 1515, 2874
BceAI ACGGC 2 cut(s) 1436, 3641
BcgI CGANNNNNNTGC 2 cut(s) 3523, 3557
BciT130I CCWGG 8 cut(s) 881, 1791, 2589, 2809, 2907, 3222, 3390, 3921
BciVI GTATCC 1 cut(s) 2335
BclI TGATCA 2 cut(s) 894, 3594
BcnI CCSGG 2 cut(s) 86, 3418
BcoDI GTCTC 7 cut(s) 343, 1157, 1700, 2537, 3287, 3561, 3752
BcuI ACTAGT 1 cut(s) 887
BfmI CTRYAG 3 cut(s) 3666, 3708, 4185
BfoI RGCGCY 2 cut(s) 2172, 2273
BfrI CTTAAG 1 cut(s) 1627
BfuAI ACCTGC 1 cut(s) 1903
BfuI GTATCC 1 cut(s) 2335
BglI GCCNNNNNGGC 2 cut(s) 1469, 1816
BglII AGATCT 1 cut(s) 658
BmcAI AGTACT 1 cut(s) 1337
Bme18I GGWCC 9 cut(s) 599, 723, 1022, 2432, 3358, 3393, 3400, 4053, 4210
BmeRI GACNNNNNGTC 1 cut(s) 1211
BmgBI CACGTC 1 cut(s) 109
BmiI GGNNCC 6 cut(s) 445, 1225, 2623, 3228, 3394, 4211
BmrI ACTGGG 1 cut(s) 4042
BmsI GCATC 7 cut(s) 421, 617, 826, 838, 1765, 3004, 4074
BmtI GCTAGC 1 cut(s) 3645
BmuI ACTGGG 1 cut(s) 4042
BoxI GACNNNNGTC 2 cut(s) 80, 1133
BpiI GAAGAC 3 cut(s) 30, 2531, 3791
BplI GAGNNNNNCTC 6 cut(s) 2158, 2190, 2987, 3019, 3263, 3295
BpmI CTGGAG 4 cut(s) 1026, 3502, 3577, 4026
Bpu10I CCTNAGC 1 cut(s) 3744
BpuEI CTTGAG 7 cut(s) 143, 296, 896, 2201, 2514, 4062, 4130
BpuMI CCSGG 2 cut(s) 86, 3418
BsaAI YACGTR 2 cut(s) 2503, 2564
BsaBI GATNNNNATC 2 cut(s) 657, 1595
BsaI GGTCTC 3 cut(s) 2537, 3287, 3561
BsaJI CCNNGG 8 cut(s) 1219, 1476, 1789, 2044, 3221, 3389, 3396, 3634
BsaWI WCCGGW 4 cut(s) 103, 611, 793, 4115
BsaXI ACNNNNNCTCC 6 cut(s) 146, 176, 2541, 2571, 3141, 3171
Bse1I ACTGG 8 cut(s) 1009, 1343, 1902, 3476, 3485, 3830, 4037, 4043
Bse21I CCTNAGG 1 cut(s) 3004
Bse3DI GCAATG 7 cut(s) 238, 1608, 1740, 2024, 2133, 2949, 3652
Bse8I GATNNNNATC 2 cut(s) 657, 1595
BseAI TCCGGA 2 cut(s) 611, 793
BseBI CCWGG 8 cut(s) 881, 1791, 2589, 2809, 2907, 3222, 3390, 3921
BseDI CCNNGG 8 cut(s) 1219, 1476, 1789, 2044, 3221, 3389, 3396, 3634
BseJI GATNNNNATC 2 cut(s) 657, 1595
BseMI GCAATG 7 cut(s) 238, 1608, 1740, 2024, 2133, 2949, 3652
BseNI ACTGG 8 cut(s) 1009, 1343, 1902, 3476, 3485, 3830, 4037, 4043
BseRI GAGGAG 8 cut(s) 161, 164, 167, 217, 979, 2163, 3162, 4205
BseSI GKGCMC 1 cut(s) 1684
BseYI CCCAGC 3 cut(s) 1646, 1794, 3167
BsgI GTGCAG 3 cut(s) 737, 1140, 2298
Bsh1285I CGRYCG 1 cut(s) 74
BshNI GGYRCC 1 cut(s) 2621
BsiEI CGRYCG 1 cut(s) 74
BsiHKAI GWGCWC 4 cut(s) 159, 454, 1515, 2874
BslFI GGGAC 2 cut(s) 1218, 3406
BsmAI GTCTC 7 cut(s) 343, 1157, 1700, 2537, 3287, 3561, 3752
BsmFI GGGAC 2 cut(s) 1218, 3406
BsmI GAATGC 2 cut(s) 851, 2893
Bso31I GGTCTC 3 cut(s) 2537, 3287, 3561
Bsp1286I GDGCHC 6 cut(s) 159, 454, 1515, 1684, 2874, 2922
Bsp13I TCCGGA 2 cut(s) 611, 793
Bsp1407I TGTACA 1 cut(s) 1569
BspEI TCCGGA 2 cut(s) 611, 793
BspHI TCATGA 4 cut(s) 855, 1098, 3516, 3957
BspLI GGNNCC 6 cut(s) 445, 1225, 2623, 3228, 3394, 4211
BspMAI CTGCAG 1 cut(s) 3712
BspMI ACCTGC 1 cut(s) 1903
BspOI GCTAGC 1 cut(s) 3645
BspPI GGATC 5 cut(s) 285, 1332, 1868, 2388, 4081
BspT107I GGYRCC 1 cut(s) 2621
BspTI CTTAAG 1 cut(s) 1627
BspTNI GGTCTC 3 cut(s) 2537, 3287, 3561
BsrBI CCGCTC 3 cut(s) 123, 178, 561
BsrDI GCAATG 7 cut(s) 238, 1608, 1740, 2024, 2133, 2949, 3652
BsrGI TGTACA 1 cut(s) 1569
BsrI ACTGG 8 cut(s) 1009, 1343, 1902, 3476, 3485, 3830, 4037, 4043
BssECI CCNNGG 8 cut(s) 1219, 1476, 1789, 2044, 3221, 3389, 3396, 3634
BssNAI GTATAC 1 cut(s) 1940
BssSI CACGAG 1 cut(s) 1389
BssT1I CCWWGG 4 cut(s) 1219, 1476, 2044, 3396
Bst1107I GTATAC 1 cut(s) 1940
Bst2BI CACGAG 1 cut(s) 1389
Bst2UI CCWGG 8 cut(s) 881, 1791, 2589, 2809, 2907, 3222, 3390, 3921
Bst6I CTCTTC 4 cut(s) 2292, 2297, 2535, 4223
BstAFI CTTAAG 1 cut(s) 1627
BstAPI GCANNNNNTGC 4 cut(s) 751, 1529, 1898, 3453
BstAUI TGTACA 1 cut(s) 1569
BstBAI YACGTR 2 cut(s) 2503, 2564
BstC8I GCNNGC 9 cut(s) 68, 125, 643, 1155, 1525, 2514, 3380, 3454, 3643
BstEII GGTNACC 2 cut(s) 679, 2702
BstENI CCTNNNNNAGG 3 cut(s) 3365, 3387, 4116
BstH2I RGCGCY 2 cut(s) 2172, 2273
BstHHI GCGC 2 cut(s) 2171, 2272
BstMAI GTCTC 7 cut(s) 343, 1157, 1700, 2537, 3287, 3561, 3752
BstMCI CGRYCG 1 cut(s) 74
BstNI CCWGG 8 cut(s) 881, 1791, 2589, 2809, 2907, 3222, 3390, 3921
BstNSI RCATGY 2 cut(s) 214, 1527
BstPAI GACNNNNGTC 2 cut(s) 80, 1133
BstPI GGTNACC 2 cut(s) 679, 2702
BstSFI CTRYAG 3 cut(s) 3666, 3708, 4185
BstSLI GKGCMC 1 cut(s) 1684
BstSNI TACGTA 1 cut(s) 2503
BstV2I GAAGAC 3 cut(s) 30, 2531, 3791
BstX2I RGATCY 2 cut(s) 658, 4073
BstXI CCANNNNNNTGG 3 cut(s) 465, 2956, 4050
BstYI RGATCY 2 cut(s) 658, 4073
BstZ17I GTATAC 1 cut(s) 1940
Bsu36I CCTNAGG 1 cut(s) 3004
BsuI GTATCC 1 cut(s) 2335
BtgZI GCGATG 1 cut(s) 2293
BtrI CACGTC 1 cut(s) 109
BtsI GCAGTG 2 cut(s) 623, 4137
BtsIMutI CAGTG 6 cut(s) 623, 2315, 2623, 3449, 3469, 4137
BveI ACCTGC 1 cut(s) 1903
Cac8I GCNNGC 9 cut(s) 68, 125, 643, 1155, 1525, 2514, 3380, 3454, 3643
CaiI CAGNNNCTG 3 cut(s) 839, 1379, 1658
CciI TCATGA 4 cut(s) 855, 1098, 3516, 3957
CfoI GCGC 2 cut(s) 2171, 2272
CseI GACGC 1 cut(s) 2804
DraI TTTAAA 1 cut(s) 1765
DriI GACNNNNNGTC 1 cut(s) 1211
EaeI YGGCCR 5 cut(s) 15, 691, 1414, 2122, 3922
Eam1104I CTCTTC 4 cut(s) 2292, 2297, 2535, 4223
Eam1105I GACNNNNNGTC 1 cut(s) 1211
EarI CTCTTC 4 cut(s) 2292, 2297, 2535, 4223
EciI GGCGGA 1 cut(s) 1739
Ecl136II GAGCTC 3 cut(s) 157, 1513, 2872
Eco105I TACGTA 1 cut(s) 2503
Eco130I CCWWGG 4 cut(s) 1219, 1476, 2044, 3396
Eco147I AGGCCT 1 cut(s) 2229
Eco24I GRGCYC 4 cut(s) 159, 1515, 2874, 2922
Eco31I GGTCTC 3 cut(s) 2537, 3287, 3561
Eco32I GATATC 1 cut(s) 931
Eco47I GGWCC 9 cut(s) 599, 723, 1022, 2432, 3358, 3393, 3400, 4053, 4210
Eco47III AGCGCT 2 cut(s) 2170, 2271
Eco53kI GAGCTC 3 cut(s) 157, 1513, 2872
Eco57I CTGAAG 1 cut(s) 2259
Eco81I CCTNAGG 1 cut(s) 3004
Eco91I GGTNACC 2 cut(s) 679, 2702
EcoICRI GAGCTC 3 cut(s) 157, 1513, 2872
EcoNI CCTNNNNNAGG 3 cut(s) 3365, 3387, 4116
EcoO109I RGGNCCY 5 cut(s) 723, 1223, 3358, 3400, 4210
EcoO65I GGTNACC 2 cut(s) 679, 2702
EcoRI GAATTC 3 cut(s) 469, 1244, 1827
EcoRII CCWGG 8 cut(s) 879, 1789, 2587, 2807, 2905, 3220, 3388, 3919
EcoRV GATATC 1 cut(s) 931
EcoT14I CCWWGG 4 cut(s) 1219, 1476, 2044, 3396
EcoT22I ATGCAT 1 cut(s) 853
EcoT38I GRGCYC 4 cut(s) 159, 1515, 2874, 2922
ErhI CCWWGG 4 cut(s) 1219, 1476, 2044, 3396
FalI AAGNNNNNCTT 6 cut(s) 1511, 1543, 1907, 1939, 3440, 3472
FaqI GGGAC 2 cut(s) 1218, 3406
FauI CCCGC 2 cut(s) 116, 2663
FauNDI CATATG 2 cut(s) 1168, 2773
FbaI TGATCA 2 cut(s) 894, 3594
FblI GTMKAC 3 cut(s) 74, 1215, 1939
FriOI GRGCYC 4 cut(s) 159, 1515, 2874, 2922
GlaI GCGC 2 cut(s) 2170, 2271
GsaI CCCAGC 3 cut(s) 1650, 1798, 3171
GsuI CTGGAG 4 cut(s) 1026, 3502, 3577, 4026
HaeII RGCGCY 2 cut(s) 2172, 2273
HgaI GACGC 1 cut(s) 2804
HhaI GCGC 2 cut(s) 2171, 2272
Hin6I GCGC 2 cut(s) 2169, 2270
HinP1I GCGC 2 cut(s) 2169, 2270
HincII GTYRAC 1 cut(s) 75
HindII GTYRAC 1 cut(s) 75
HindIII AAGCTT 2 cut(s) 3117, 3194
HphI GGTGA 9 cut(s) 510, 773, 1390, 1492, 2100, 2760, 2938, 3083, 4097
Hpy99I CGWCG 3 cut(s) 79, 526, 2394
HpyCH4IV ACGT 6 cut(s) 108, 906, 994, 2502, 2563, 3768
HpySE526I ACGT 6 cut(s) 108, 906, 994, 2502, 2563, 3768
HspAI GCGC 2 cut(s) 2169, 2270
Kpn2I TCCGGA 2 cut(s) 611, 793
Ksp22I TGATCA 2 cut(s) 894, 3594
LweI GCATC 7 cut(s) 421, 617, 826, 838, 1765, 3004, 4074
MaeII ACGT 6 cut(s) 108, 906, 994, 2502, 2563, 3768
MbiI CCGCTC 3 cut(s) 123, 178, 561
MfeI CAATTG 2 cut(s) 3030, 3939
MflI RGATCY 2 cut(s) 658, 4073
MhlI GDGCHC 6 cut(s) 159, 454, 1515, 1684, 2874, 2922
MlsI TGGCCA 4 cut(s) 693, 1416, 2124, 3924
MluNI TGGCCA 4 cut(s) 693, 1416, 2124, 3924
MlyI GAGTC 4 cut(s) 345, 507, 2363, 2521
MmeI TCCRAC 6 cut(s) 38, 482, 490, 1000, 2878, 3249
Mox20I TGGCCA 4 cut(s) 693, 1416, 2124, 3924
Mph1103I ATGCAT 1 cut(s) 853
MroI TCCGGA 2 cut(s) 611, 793
MroXI GAANNNNTTC 3 cut(s) 711, 3974, 4139
MscI TGGCCA 4 cut(s) 693, 1416, 2124, 3924
MslI CAYNNNNRTG 5 cut(s) 759, 869, 2954, 2987, 3866
Msp20I TGGCCA 4 cut(s) 693, 1416, 2124, 3924
MspA1I CMGCKG 3 cut(s) 66, 118, 2739
MspCI CTTAAG 1 cut(s) 1627
MunI CAATTG 2 cut(s) 3030, 3939
Mva1269I GAATGC 2 cut(s) 851, 2893
MvaI CCWGG 8 cut(s) 881, 1791, 2589, 2809, 2907, 3222, 3390, 3921
NciI CCSGG 2 cut(s) 86, 3418
NdeI CATATG 2 cut(s) 1168, 2773
NheI GCTAGC 1 cut(s) 3641
NlaIV GGNNCC 6 cut(s) 445, 1225, 2623, 3228, 3394, 4211
NmuCI GTSAC 5 cut(s) 1126, 1309, 2472, 3157, 4085
NsiI ATGCAT 1 cut(s) 853
NspI RCATGY 2 cut(s) 214, 1527
OliI CACNNNNGTG 1 cut(s) 759
PaeI GCATGC 1 cut(s) 1527
PagI TCATGA 4 cut(s) 855, 1098, 3516, 3957
PaqCI CACCTGC 1 cut(s) 1903
PceI AGGCCT 1 cut(s) 2229
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 2 cut(s) 851, 2893
PdmI GAANNNNTTC 3 cut(s) 711, 3974, 4139
PflMI CCANNNNNTGG 1 cut(s) 4017
PfoI TCCNGGA 2 cut(s) 84, 2905
PleI GAGTC 4 cut(s) 345, 507, 2363, 2521
PpsI GAGTC 4 cut(s) 345, 507, 2363, 2521
Ppu21I YACGTR 2 cut(s) 2503, 2564
PpuMI RGGWCCY 4 cut(s) 723, 3358, 3400, 4210
PshAI GACNNNNGTC 2 cut(s) 80, 1133
Psp124BI GAGCTC 3 cut(s) 159, 1515, 2874
Psp5II RGGWCCY 4 cut(s) 723, 3358, 3400, 4210
Psp6I CCWGG 8 cut(s) 879, 1789, 2587, 2807, 2905, 3220, 3388, 3919
PspEI GGTNACC 2 cut(s) 679, 2702
PspFI CCCAGC 3 cut(s) 1646, 1794, 3167
PspGI CCWGG 8 cut(s) 879, 1789, 2587, 2807, 2905, 3220, 3388, 3919
PspN4I GGNNCC 6 cut(s) 445, 1225, 2623, 3228, 3394, 4211
PspPPI RGGWCCY 4 cut(s) 723, 3358, 3400, 4210
PsrI GAACNNNNNNTAC 4 cut(s) 1343, 1375, 3479, 3511
PstI CTGCAG 1 cut(s) 3712
PstNI CAGNNNCTG 3 cut(s) 839, 1379, 1658
PsuI RGATCY 2 cut(s) 658, 4073
PvuII CAGCTG 1 cut(s) 66
RseI CAYNNNNRTG 5 cut(s) 759, 869, 2954, 2987, 3866
SacI GAGCTC 3 cut(s) 159, 1515, 2874
SalI GTCGAC 1 cut(s) 73
ScaI AGTACT 1 cut(s) 1337
SchI GAGTC 4 cut(s) 345, 507, 2363, 2521
SduI GDGCHC 6 cut(s) 159, 454, 1515, 1684, 2874, 2922
SfaNI GCATC 7 cut(s) 421, 617, 826, 838, 1765, 3004, 4074
SfcI CTRYAG 3 cut(s) 3666, 3708, 4185
SinI GGWCC 9 cut(s) 599, 723, 1022, 2432, 3358, 3393, 3400, 4053, 4210
SmiMI CAYNNNNRTG 5 cut(s) 759, 869, 2954, 2987, 3866
SmlI CTYRAG 8 cut(s) 158, 311, 911, 1627, 2216, 2529, 4077, 4145
SmoI CTYRAG 8 cut(s) 158, 311, 911, 1627, 2216, 2529, 4077, 4145
SnaBI TACGTA 1 cut(s) 2503
SpeI ACTAGT 1 cut(s) 887
SphI GCATGC 1 cut(s) 1527
SseBI AGGCCT 1 cut(s) 2229
SspI AATATT 2 cut(s) 2246, 3206
SstI GAGCTC 3 cut(s) 159, 1515, 2874
StuI AGGCCT 1 cut(s) 2229
StyI CCWWGG 4 cut(s) 1219, 1476, 2044, 3396
TaiI ACGT 6 cut(s) 111, 909, 997, 2505, 2566, 3771
TaqI TCGA 7 cut(s) 41, 74, 174, 524, 578, 1179, 3309
TatI WGTACW 6 cut(s) 1254, 1335, 1569, 1758, 3717, 3846
TauI GCSGC 5 cut(s) 8, 11, 130, 170, 3029
TscAI CASTG 6 cut(s) 630, 2322, 2623, 3449, 3476, 4137
TseFI GTSAC 5 cut(s) 1126, 1309, 2472, 3157, 4085
Tsp45I GTSAC 5 cut(s) 1126, 1309, 2472, 3157, 4085
TspGWI ACGGA 3 cut(s) 1434, 1955, 2860
TspRI CASTG 6 cut(s) 630, 2322, 2623, 3449, 3476, 4137
Van91I CCANNNNNTGG 1 cut(s) 4017
Vha464I CTTAAG 1 cut(s) 1627
VpaK11BI GGWCC 9 cut(s) 599, 723, 1022, 2432, 3358, 3393, 3400, 4053, 4210
XagI CCTNNNNNAGG 3 cut(s) 3365, 3387, 4116
XapI RAATTY 9 cut(s) 469, 698, 707, 1094, 1244, 1670, 1827, 2147, 3839
XbaI TCTAGA 1 cut(s) 803
XceI RCATGY 2 cut(s) 214, 1527
XcmI CCANNNNNNNNNTGG 2 cut(s) 2446, 2986
XmiI GTMKAC 3 cut(s) 74, 1215, 1939
XmnI GAANNNNTTC 3 cut(s) 711, 3974, 4139
ZrmI AGTACT 1 cut(s) 1337
Zsp2I ATGCAT 1 cut(s) 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.