FvH4_3g29781

Pleiotropic drug resistance protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000245
Physical Location & Seq
Forward (+)
22878496 .. 22881401
2906 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g29781.t1

Sequence Viewer

Length: 1938 bp
ATGGCGGCGGCGGCGTTGGCGGGAGATGACCTGTCGAGGCAGTCGAGTAGCCGGAGGAGCTGGCGGTCGACGAGTGTCCGGGAATTATGGAACGCGCCGGACGTGTTCCAGCGGAGCGTCCGGCAGATGGACGAGGAGGAGGAGCTCAAGTGGGCAGCCATAGAGAGGTTGCCGACTTACGATAGGATGAGGAAAGGGATGTTGAGGAATGTTATGAGCAATGGAAGGGTTGTGGCTGAAGAAGTCGACGTTGTGAATCTTGGGGATTCAGAGAAGAAGCGGTTGATGGAGAGCATACTTAAGGTTATTGAGGAGGACAATGAGAAGTTCTTGAAGAAGCTCAGAGCTAGAAATGACAGGGTTGGTATCGATATTCCTAGAGTTGAGGTTCGATTCCAAAATCTAAAAATAGAGGGAGATGCATTTGTTGGCACCAGAGCACTTCCGACTCTATGGAATTCCACCTTGAACGCAATAGAGGGAATACTGGGACTTGTTGGACTTTCACCATCAAAGAAAAGAATTGTGAAGATACTAGAAGATGTTAGTGGTATTGTCAAACCAGCAAGGTTGACACTTCTTCTTGGACCTCCGGGATCAGGAAAAACAACATTGCTAAAAGCACTTTCTGGCAAACTAGATAGGGATCTTAAGGTTGATGGGAAAGTGACTTACTGCGGCCATGAATTTAATGAATTTATACCTCAGAAAACCTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACACTTGATTTCTCTGGACGTTGCCTAGGAGTTGGAACAAGGTATGATAAACTAGCAGAGTTGTCTAGACGGGAGAAAGATGCAGGTATTAAACCAGATCCTGGGATTGATGCATACATGAAAGCCACATCTCTGGCAGGACAGGAAACAAGTTTGGTCACAGATTATGTTCTCAAGATTCTTGGATTGGATATCTGTGCTGATATTCTGGTGGGTGATGAAATGAGAAGGGGAATATCTGGTGGACAAAAGAAGCGTGTCACGACTGGAGAGATGTTAGTTGGACCAGCAAAAGCATATTTCATGGATGAAATATCAACAGGGTTGGATAGTTCCACAACCTTTCAGATTGTCAGATACATGAGACAGATGGTTCACATTATGGATGTGTCAATGGTCATCTCTCTATTGCAGCCTGCACCCGAGACATACGATCTTTTTGATGATGTTATCCTTCTCTCGGACGGTCAGATTGTTTATCAAGGCCCACGTGAGAATGTCCTCGAGTTCTTTGAATATATGGGATTCAAATGCCCTGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTTACCTCAAAGAAGGACCAAGAACAATACTGGTTCAAGAACCAACCTTACAGATCAGTCACAGTCTCTGATTTTGTTCGTGCATTCAGCTCCTTTCATGTTGGCCAACGGCTTGGGGAAGAACTAAGAGTCTCTTATGATAAAAGACAAGCCCATCCTGCTGCTTTGGTTAAGGAAAAGTATGGAATATCTAGTATGGAGCTCTTCAAGGCATGCTTTGCAAGGGAATTGCTCCTAATGAAGCGGAACTCTTTTGTTTACATATTCAAAACTGCACAGATTGCCATCATGGCTACAATTACTTTGACTGTATTCCTTAGAACAGAAATGAAATCAGGGACACAAGCTGATTCATCAAAGTATTGGGGGGCACTATTTTTCAGTCTCATTAACATCATGTTTAATGGAATGACAGAGCTTGCAATGACAGTTTTCCGGCTTCCAGTGTTCTTTAAACAGAGGGATGCCTTGTTCTATCCAGCGTGGGCTTTTGCGTTGCCCATTTGGGTGACCAGAATTCCTATTTCAGTTGTGGAATCTGCAATATGGATCGGCTTTACCTATTATTCCATAGGATTTGCACCTGATGCCAGTAGGTAA

Protein Analysis

646

Amino Acids

72.96

Weight (kDa)

8.74

Isoelectric Point (pI)

39.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 105 - 153 7.4e-09 ABC-transporter N-terminal
ABC_tran PF00005 179 - 360 1.2e-15 ABC transporter
ABC2_membrane_7 PF19055 394 - 445 3.5e-06 ABC-2 type transporter
ABC2_membrane PF01061 514 - 645 3.8e-24 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 842
AccB1I GGYRCC 1 cut(s) 431
AccB7I CCANNNNNTGG 1 cut(s) 869
AccI GTMKAC 2 cut(s) 68, 246
AccII CGCG 1 cut(s) 95
AciI CCGC 9 cut(s) 5, 8, 11, 20, 64, 112, 280, 678, 1582
AclWI GGATC 4 cut(s) 604, 654, 860, 1895
AcoI YGGCCR 2 cut(s) 679, 1441
AcsI RAATTY 4 cut(s) 457, 686, 695, 1854
AcuI CTGAAG 1 cut(s) 258
AcvI CACGTG 1 cut(s) 1259
AfiI CCNNNNNNNGG 5 cut(s) 127, 165, 599, 869, 1228
AflII CTTAAG 2 cut(s) 299, 650
AflIII ACRYGT 1 cut(s) 102
AgsI TTSAA 7 cut(s) 334, 469, 1283, 1297, 1375, 1546, 1606
AjiI CACGTC 1 cut(s) 103
AjnI CCWGG 1 cut(s) 868
AloI GAACNNNNNNTCC 2 cut(s) 1793, 1825
AluBI AGCT 8 cut(s) 60, 145, 340, 347, 1428, 1540, 1685, 1756
AluI AGCT 8 cut(s) 60, 145, 340, 347, 1428, 1540, 1685, 1756
Alw21I GWGCWC 3 cut(s) 147, 442, 1542
Alw26I GTCTC 5 cut(s) 1126, 1187, 1408, 1474, 1727
AlwI GGATC 4 cut(s) 604, 654, 860, 1895
AlwNI CAGNNNCTG 2 cut(s) 869, 1406
Ama87I CYCGRG 2 cut(s) 1190, 1271
AoxI GGCC 3 cut(s) 679, 1252, 1441
ApeKI GCWGC 3 cut(s) 155, 1180, 1499
ApoI RAATTY 4 cut(s) 457, 686, 695, 1854
AspA2I CCTAGG 1 cut(s) 793
AspLEI GCGC 1 cut(s) 97
AspS9I GGNCC 4 cut(s) 587, 1052, 1253, 1354
AsuC2I CCSGG 2 cut(s) 80, 594
AsuHPI GGTGA 4 cut(s) 498, 761, 995, 1858
AvaI CYCGRG 2 cut(s) 1190, 1271
AvaII GGWCC 3 cut(s) 587, 1052, 1354
AvrII CCTAGG 1 cut(s) 793
BaeGI GKGCMC 1 cut(s) 1711
BalI TGGCCA 1 cut(s) 1443
BanI GGYRCC 1 cut(s) 431
BanII GRGCYC 2 cut(s) 147, 1542
BbrPI CACGTG 1 cut(s) 1259
Bbv12I GWGCWC 3 cut(s) 147, 442, 1542
BbvI GCAGC 3 cut(s) 167, 1192, 1486
BccI CCATC 7 cut(s) 121, 280, 517, 653, 1132, 1500, 1631
BceAI ACGGC 1 cut(s) 1463
BciT130I CCWGG 1 cut(s) 870
BcnI CCSGG 2 cut(s) 80, 594
BcoDI GTCTC 5 cut(s) 1126, 1187, 1408, 1474, 1727
BfaI CTAG 8 cut(s) 348, 378, 536, 638, 794, 821, 834, 1530
BfrI CTTAAG 2 cut(s) 299, 650
BfuAI ACCTGC 1 cut(s) 842
BglI GCCNNNNNGGC 1 cut(s) 1628
BisI GCNGC 7 cut(s) 6, 9, 12, 156, 679, 1181, 1500
BlnI CCTAGG 1 cut(s) 793
BlsI GCNGC 7 cut(s) 7, 10, 13, 157, 680, 1182, 1501
Bme1390I CCNGG 3 cut(s) 80, 594, 870
Bme18I GGWCC 3 cut(s) 587, 1052, 1354
BmeT110I CYCGRG 2 cut(s) 1190, 1271
BmgBI CACGTC 1 cut(s) 103
BmgT120I GGNCC 4 cut(s) 587, 1052, 1253, 1354
BmiI GGNNCC 1 cut(s) 433
BmrFI CCNGG 3 cut(s) 80, 594, 870
BmrI ACTGGG 1 cut(s) 497
BmsI GCATC 5 cut(s) 409, 838, 868, 1792, 1915
BmuI ACTGGG 1 cut(s) 497
BoxI GACNNNNGTC 1 cut(s) 74
BpmI CTGGAG 1 cut(s) 1056
BpuEI CTTGAG 2 cut(s) 131, 926
BpuMI CCSGG 2 cut(s) 80, 594
Bsa29I ATCGAT 1 cut(s) 369
BsaAI YACGTR 1 cut(s) 1259
BsaBI GATNNNNATC 2 cut(s) 645, 1622
BsaJI CCNNGG 2 cut(s) 793, 869
BsaXI ACNNNNNCTCC 2 cut(s) 134, 164
Bsc4I CCNNNNNNNGG 5 cut(s) 127, 165, 599, 869, 1228
Bse1I ACTGG 5 cut(s) 492, 1039, 1373, 1781, 1929
Bse3DI GCAATG 3 cut(s) 226, 611, 1767
Bse8I GATNNNNATC 2 cut(s) 645, 1622
BseBI CCWGG 1 cut(s) 870
BseCI ATCGAT 1 cut(s) 369
BseDI CCNNGG 2 cut(s) 793, 869
BseGI GGATG 6 cut(s) 192, 204, 1081, 1159, 1492, 1807
BseJI GATNNNNATC 2 cut(s) 645, 1622
BseLI CCNNNNNNNGG 5 cut(s) 127, 165, 599, 869, 1228
BseMI GCAATG 3 cut(s) 226, 611, 1767
BseMII CTCAG 2 cut(s) 355, 719
BseNI ACTGG 5 cut(s) 492, 1039, 1373, 1781, 1929
BseRI GAGGAG 5 cut(s) 70, 149, 152, 155, 326
BseSI GKGCMC 1 cut(s) 1711
BseXI GCAGC 3 cut(s) 167, 1192, 1486
BsgI GTGCAG 2 cut(s) 1170, 1596
Bsh1236I CGCG 1 cut(s) 95
Bsh1285I CGRYCG 1 cut(s) 68
BshFI GGCC 3 cut(s) 681, 1254, 1443
BshNI GGYRCC 1 cut(s) 431
BshVI ATCGAT 1 cut(s) 369
BsiEI CGRYCG 1 cut(s) 68
BsiHKAI GWGCWC 3 cut(s) 147, 442, 1542
BsiHKCI CYCGRG 2 cut(s) 1190, 1271
BsiSI CCGG 6 cut(s) 52, 79, 98, 121, 593, 1774
BslFI GGGAC 2 cut(s) 504, 1690
BslI CCNNNNNNNGG 5 cut(s) 127, 165, 599, 869, 1228
BsmAI GTCTC 5 cut(s) 1126, 1187, 1408, 1474, 1727
BsmFI GGGAC 2 cut(s) 504, 1690
BsmI GAATGC 1 cut(s) 1421
BsnI GGCC 3 cut(s) 681, 1254, 1443
BsoBI CYCGRG 2 cut(s) 1190, 1271
Bsp1286I GDGCHC 4 cut(s) 147, 442, 1542, 1711
Bsp143I GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
BspACI CCGC 9 cut(s) 5, 8, 11, 20, 64, 112, 280, 678, 1582
BspANI GGCC 3 cut(s) 681, 1254, 1443
BspCNI CTCAG 2 cut(s) 354, 718
BspDI ATCGAT 1 cut(s) 369
BspFNI CGCG 1 cut(s) 95
BspLI GGNNCC 1 cut(s) 433
BspMI ACCTGC 1 cut(s) 842
BspPI GGATC 4 cut(s) 604, 654, 860, 1895
BspQI GCTCTTC 1 cut(s) 1547
BspT107I GGYRCC 1 cut(s) 431
BspTI CTTAAG 2 cut(s) 299, 650
BsrDI GCAATG 3 cut(s) 226, 611, 1767
BsrI ACTGG 5 cut(s) 492, 1039, 1373, 1781, 1929
BssECI CCNNGG 2 cut(s) 793, 869
BssMI GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
BssT1I CCWWGG 1 cut(s) 793
Bst2UI CCWGG 1 cut(s) 870
Bst4CI ACNGT 5 cut(s) 760, 1235, 1402, 1648, 1768
Bst6I CTCTTC 1 cut(s) 1547
BstAFI CTTAAG 2 cut(s) 299, 650
BstAPI GCANNNNNTGC 3 cut(s) 1556, 1619, 1925
BstBAI YACGTR 1 cut(s) 1259
BstC8I GCNNGC 5 cut(s) 62, 731, 1185, 1552, 1758
BstDEI CTNAG 4 cut(s) 341, 705, 1463, 1655
BstEII GGTNACC 1 cut(s) 1846
BstF5I GGATG 6 cut(s) 192, 204, 1081, 1159, 1492, 1807
BstFNI CGCG 1 cut(s) 95
BstHHI GCGC 1 cut(s) 97
BstKTI GATC 7 cut(s) 599, 649, 739, 868, 1204, 1394, 1890
BstMAI GTCTC 5 cut(s) 1126, 1187, 1408, 1474, 1727
BstMBI GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
BstMCI CGRYCG 1 cut(s) 68
BstMWI GCNNNNNNNGC 8 cut(s) 11, 17, 57, 1496, 1556, 1619, 1628, 1925
BstNI CCWGG 1 cut(s) 870
BstNSI RCATGY 1 cut(s) 1554
BstPAI GACNNNNGTC 1 cut(s) 74
BstPI GGTNACC 1 cut(s) 1846
BstSCI CCNGG 3 cut(s) 78, 592, 868
BstSLI GKGCMC 1 cut(s) 1711
BstUI CGCG 1 cut(s) 95
BstV1I GCAGC 3 cut(s) 167, 1192, 1486
BstX2I RGATCY 2 cut(s) 646, 865
BstXI CCANNNNNNTGG 2 cut(s) 901, 1451
BstYI RGATCY 2 cut(s) 646, 865
Bsu15I ATCGAT 1 cut(s) 369
BsuRI GGCC 3 cut(s) 681, 1254, 1443
BsuTUI ATCGAT 1 cut(s) 369
BtrI CACGTC 1 cut(s) 103
BtsCI GGATG 6 cut(s) 192, 204, 1081, 1159, 1492, 1807
BtsIMutI CAGTG 1 cut(s) 1788
BveI ACCTGC 1 cut(s) 842
Cac8I GCNNGC 5 cut(s) 62, 731, 1185, 1552, 1758
CaiI CAGNNNCTG 2 cut(s) 869, 1406
CfoI GCGC 1 cut(s) 97
Cfr13I GGNCC 4 cut(s) 587, 1052, 1253, 1354
ClaI ATCGAT 1 cut(s) 369
CseI GACGC 1 cut(s) 106
CviAII CATG 9 cut(s) 683, 734, 886, 1072, 1129, 1436, 1551, 1627, 1735
DdeI CTNAG 4 cut(s) 341, 705, 1463, 1655
DpnI GATC 7 cut(s) 598, 648, 738, 867, 1203, 1393, 1889
DpnII GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
DraI TTTAAA 1 cut(s) 1792
EaeI YGGCCR 2 cut(s) 679, 1441
Eam1104I CTCTTC 1 cut(s) 1547
EarI CTCTTC 1 cut(s) 1547
Ecl136II GAGCTC 2 cut(s) 145, 1540
Eco130I CCWWGG 1 cut(s) 793
Eco24I GRGCYC 2 cut(s) 147, 1542
Eco32I GATATC 1 cut(s) 961
Eco47I GGWCC 3 cut(s) 587, 1052, 1354
Eco53kI GAGCTC 2 cut(s) 145, 1540
Eco57I CTGAAG 1 cut(s) 258
Eco72I CACGTG 1 cut(s) 1259
Eco88I CYCGRG 2 cut(s) 1190, 1271
Eco91I GGTNACC 1 cut(s) 1846
EcoICRI GAGCTC 2 cut(s) 145, 1540
EcoO65I GGTNACC 1 cut(s) 1846
EcoRI GAATTC 2 cut(s) 457, 1854
EcoRII CCWGG 1 cut(s) 868
EcoRV GATATC 1 cut(s) 961
EcoT14I CCWWGG 1 cut(s) 793
EcoT22I ATGCAT 2 cut(s) 424, 883
EcoT38I GRGCYC 2 cut(s) 147, 1542
ErhI CCWWGG 1 cut(s) 793
FaeI CATG 9 cut(s) 686, 737, 889, 1075, 1132, 1439, 1554, 1630, 1738
FalI AAGNNNNNCTT 4 cut(s) 1456, 1488, 1538, 1570
FaqI GGGAC 2 cut(s) 504, 1690
FatI CATG 9 cut(s) 682, 733, 885, 1071, 1128, 1435, 1550, 1626, 1734
FauI CCCGC 1 cut(s) 13
FblI GTMKAC 2 cut(s) 68, 246
Fnu4HI GCNGC 7 cut(s) 6, 9, 12, 156, 679, 1181, 1500
FokI GGATG 6 cut(s) 199, 211, 1088, 1166, 1479, 1814
FriOI GRGCYC 2 cut(s) 147, 1542
Fsp4HI GCNGC 7 cut(s) 6, 9, 12, 156, 679, 1181, 1500
FspBI CTAG 8 cut(s) 348, 378, 536, 638, 794, 821, 834, 1530
GlaI GCGC 1 cut(s) 96
GluI GCNGC 7 cut(s) 6, 9, 12, 156, 679, 1181, 1500
GsuI CTGGAG 1 cut(s) 1056
HaeIII GGCC 3 cut(s) 681, 1254, 1443
HapII CCGG 6 cut(s) 52, 79, 98, 121, 593, 1774
HgaI GACGC 1 cut(s) 106
HhaI GCGC 1 cut(s) 97
Hin1II CATG 9 cut(s) 686, 737, 889, 1075, 1132, 1439, 1554, 1630, 1738
Hin6I GCGC 1 cut(s) 95
HinP1I GCGC 1 cut(s) 95
HincII GTYRAC 3 cut(s) 69, 247, 573
HindII GTYRAC 3 cut(s) 69, 247, 573
HinfI GANTC 9 cut(s) 256, 266, 393, 448, 946, 1293, 1467, 1688, 1874
HpaII CCGG 6 cut(s) 52, 79, 98, 121, 593, 1774
HphI GGTGA 4 cut(s) 498, 761, 995, 1858
Hpy166II GTNNAC 6 cut(s) 69, 247, 573, 1013, 1144, 1597
Hpy188I TCNGA 9 cut(s) 271, 344, 447, 708, 1116, 1124, 1231, 1239, 1408
Hpy188III TCNNGA 8 cut(s) 331, 600, 764, 783, 834, 943, 1030, 1375
Hpy8I GTNNAC 6 cut(s) 69, 247, 573, 1013, 1144, 1597
Hpy99I CGWCG 2 cut(s) 73, 251
HpyAV CCTTC 4 cut(s) 219, 990, 1232, 1345
HpyCH4III ACNGT 5 cut(s) 760, 1235, 1402, 1648, 1768
HpyCH4IV ACGT 4 cut(s) 102, 249, 787, 1258
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 17, 57, 1496, 1556, 1619, 1628, 1925
HpyF3I CTNAG 4 cut(s) 341, 705, 1463, 1655
HpySE526I ACGT 4 cut(s) 102, 249, 787, 1258
Hsp92II CATG 9 cut(s) 686, 737, 889, 1075, 1132, 1439, 1554, 1630, 1738
HspAI GCGC 1 cut(s) 95
Kzo9I GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
LguI GCTCTTC 1 cut(s) 1547
LmnI GCTCC 6 cut(s) 57, 114, 142, 1433, 1537, 1575
Lsp1109I GCAGC 3 cut(s) 167, 1192, 1486
LweI GCATC 5 cut(s) 409, 838, 868, 1792, 1915
MaeI CTAG 8 cut(s) 348, 378, 536, 638, 794, 821, 834, 1530
MaeII ACGT 4 cut(s) 102, 249, 787, 1258
MaeIII GTNAC 6 cut(s) 667, 925, 1027, 1339, 1396, 1846
MalI GATC 7 cut(s) 598, 648, 738, 867, 1203, 1393, 1889
MboI GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
MboII GAAGA 9 cut(s) 251, 286, 346, 541, 551, 572, 731, 1469, 1534
MflI RGATCY 2 cut(s) 646, 865
MhlI GDGCHC 4 cut(s) 147, 442, 1542, 1711
MlsI TGGCCA 1 cut(s) 1443
MluCI AATT 8 cut(s) 83, 457, 522, 686, 695, 1565, 1635, 1854
MluNI TGGCCA 1 cut(s) 1443
MlyI GAGTC 2 cut(s) 442, 1476
MmeI TCCRAC 5 cut(s) 470, 478, 781, 1030, 1074
Mox20I TGGCCA 1 cut(s) 1443
Mph1103I ATGCAT 2 cut(s) 424, 883
MscI TGGCCA 1 cut(s) 1443
MseI TTAA 8 cut(s) 300, 651, 690, 858, 1509, 1728, 1740, 1791
MslI CAYNNNNRTG 2 cut(s) 747, 1844
Msp20I TGGCCA 1 cut(s) 1443
MspA1I CMGCKG 1 cut(s) 112
MspCI CTTAAG 2 cut(s) 299, 650
MspI CCGG 6 cut(s) 52, 79, 98, 121, 593, 1774
MspR9I CCNGG 3 cut(s) 80, 594, 870
Mva1269I GAATGC 1 cut(s) 1421
MvaI CCWGG 1 cut(s) 870
MvnI CGCG 1 cut(s) 95
MwoI GCNNNNNNNGC 8 cut(s) 11, 17, 57, 1496, 1556, 1619, 1628, 1925
NciI CCSGG 2 cut(s) 80, 594
NdeII GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
NlaIII CATG 9 cut(s) 686, 737, 889, 1075, 1132, 1439, 1554, 1630, 1738
NlaIV GGNNCC 1 cut(s) 433
NmuCI GTSAC 5 cut(s) 667, 925, 1027, 1396, 1846
NsiI ATGCAT 2 cut(s) 424, 883
NspI RCATGY 1 cut(s) 1554
PaeI GCATGC 1 cut(s) 1554
PaeR7I CTCGAG 1 cut(s) 1271
PciSI GCTCTTC 1 cut(s) 1547
PcsI WCGNNNNNNNCGW 2 cut(s) 41, 99
PctI GAATGC 1 cut(s) 1421
PfeI GAWTC 7 cut(s) 256, 266, 393, 946, 1293, 1688, 1874
PflMI CCANNNNNTGG 1 cut(s) 869
PfoI TCCNGGA 2 cut(s) 78, 592
PkrI GCNGC 7 cut(s) 7, 10, 13, 157, 680, 1182, 1501
PleI GAGTC 2 cut(s) 442, 1475
PmaCI CACGTG 1 cut(s) 1259
PmlI CACGTG 1 cut(s) 1259
PpsI GAGTC 2 cut(s) 442, 1475
Ppu21I YACGTR 1 cut(s) 1259
PshAI GACNNNNGTC 1 cut(s) 74
Psp124BI GAGCTC 2 cut(s) 147, 1542
Psp6I CCWGG 1 cut(s) 868
PspCI CACGTG 1 cut(s) 1259
PspEI GGTNACC 1 cut(s) 1846
PspGI CCWGG 1 cut(s) 868
PspN4I GGNNCC 1 cut(s) 433
PspPI GGNCC 4 cut(s) 587, 1052, 1253, 1354
PspXI VCTCGAGB 1 cut(s) 1271
PsrI GAACNNNNNNTAC 2 cut(s) 1370, 1402
PstNI CAGNNNCTG 2 cut(s) 869, 1406
PsuI RGATCY 2 cut(s) 646, 865
RseI CAYNNNNRTG 2 cut(s) 747, 1844
SacI GAGCTC 2 cut(s) 147, 1542
SalI GTCGAC 2 cut(s) 67, 245
SapI GCTCTTC 1 cut(s) 1547
SaqAI TTAA 8 cut(s) 300, 651, 690, 858, 1509, 1728, 1740, 1791
SatI GCNGC 7 cut(s) 6, 9, 12, 156, 679, 1181, 1500
Sau3AI GATC 7 cut(s) 596, 646, 736, 865, 1201, 1391, 1887
Sau96I GGNCC 4 cut(s) 587, 1052, 1253, 1354
SchI GAGTC 2 cut(s) 442, 1476
ScrFI CCNGG 3 cut(s) 80, 594, 870
SduI GDGCHC 4 cut(s) 147, 442, 1542, 1711
SfaNI GCATC 5 cut(s) 409, 838, 868, 1792, 1915
Sfr274I CTCGAG 1 cut(s) 1271
SinI GGWCC 3 cut(s) 587, 1052, 1354
SlaI CTCGAG 1 cut(s) 1271
SmiMI CAYNNNNRTG 2 cut(s) 747, 1844
SmlI CTYRAG 5 cut(s) 146, 299, 650, 941, 1271
SmoI CTYRAG 5 cut(s) 146, 299, 650, 941, 1271
SphI GCATGC 1 cut(s) 1554
Sse9I AATT 8 cut(s) 83, 457, 522, 686, 695, 1565, 1635, 1854
SsiI CCGC 9 cut(s) 5, 8, 11, 20, 64, 112, 280, 678, 1582
SspMI CTAG 8 cut(s) 348, 378, 536, 638, 794, 821, 834, 1530
SstI GAGCTC 2 cut(s) 147, 1542
StyD4I CCNGG 3 cut(s) 78, 592, 868
StyI CCWWGG 1 cut(s) 793
TaaI ACNGT 5 cut(s) 760, 1235, 1402, 1648, 1768
TaiI ACGT 4 cut(s) 105, 252, 790, 1261
TaqI TCGA 7 cut(s) 35, 44, 68, 246, 369, 391, 1272
TasI AATT 8 cut(s) 83, 457, 522, 686, 695, 1565, 1635, 1854
TauI GCSGC 4 cut(s) 8, 11, 14, 681
TfiI GAWTC 7 cut(s) 256, 266, 393, 946, 1293, 1688, 1874
Tru1I TTAA 8 cut(s) 300, 651, 690, 858, 1509, 1728, 1740, 1791
Tru9I TTAA 8 cut(s) 300, 651, 690, 858, 1509, 1728, 1740, 1791
TscAI CASTG 1 cut(s) 1788
TseFI GTSAC 5 cut(s) 667, 925, 1027, 1396, 1846
TseI GCWGC 3 cut(s) 155, 1180, 1499
Tsp45I GTSAC 5 cut(s) 667, 925, 1027, 1396, 1846
TspRI CASTG 1 cut(s) 1788
Van91I CCANNNNNTGG 1 cut(s) 869
Vha464I CTTAAG 2 cut(s) 299, 650
VpaK11BI GGWCC 3 cut(s) 587, 1052, 1354
XapI RAATTY 4 cut(s) 457, 686, 695, 1854
XbaI TCTAGA 1 cut(s) 833
XceI RCATGY 1 cut(s) 1554
XhoI CTCGAG 1 cut(s) 1271
XmaJI CCTAGG 1 cut(s) 793
XmiI GTMKAC 2 cut(s) 68, 246
XspI CTAG 8 cut(s) 348, 378, 536, 638, 794, 821, 834, 1530
Zsp2I ATGCAT 2 cut(s) 424, 883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.