pycom11g12960

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
11983203 .. 11989968
6766 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g12960.14

Sequence Viewer

Length: 4356 bp
ATGGCGTCACCACCATTGGGGGTGGATGATTTAACTAGGCAGAGTAGCAGCCGGAGTAGCAGCCGGAGGAGCTGGCGGTCTACTAGTGTTAGAGAAATGTGGAATGCTCCAGATGTGTTCCAGCGGAGCAGCAGGCAGCAGATGGTGGATGAGGAGGAGGAGCTCAAGTGGGCCGCCATAGAGCGATTGCCAACGTATGATAGGATGAGGAAGGGAATGTTGAGGCAGGCCATGAGCAATGGGAGGTATGTGACTGAAGAAGTTGATGTTGCGAAACTTGGGGTACAAGACAAGAAGCAGTTGATGGAGAGCATACTTAAGGTTGTTGAGGATGATAATGAAAGGTTCTTGAAGAGGCTCAGGGCTCGAAACGACAGGGTCGGTATCGACATTCCTAAGGTTGAGGTTAGATTTGAGAATTTATCAATAGAGGGAGATGCATATGTTGGCACCAGAGCTCTTCCAACTTTGCTGAATTCTACCTTGAACCAAATTGAGGGACTAATTGGATTGATTGGACTCTCAAAATCGAACAAAAGAGTCGTCAAGATACTCCAAGATGTGAGCGGTATTGTTAAACCATCAAGGATGACACTGCTTCTTGGACCTCCCTCATCAGGGAAAACAACGCTACTGAAAGCACTTGCTGGCAAACTTGATAGGGATCTAAGGGTAACCGGGAAAGTGACCTACTGTGGCCATGAATTCCAAGAATTTGTGCCTCAGAGAACCTCTGCTTATATCAGTCAGCATGATCTCCATTATGGTGAGATGACAGTTCGCGAAACACTGGATTTCTCTGGACGTTGCCTTGGAGTTGGAACAAGGTATGATATGCTAGTAGAGATGTCTAGAAGAGAGAAAGATGCAGGTATCAAACCTGATCCTGAAATCGATGCATTCATGAAAGCCACATCTATGGCAGGCACCGAAACTAGCTTGATCACAGATTATGTTCTCAAGATACTTGGATTAGATATATGTGCTGATATAATGGTGGGTGATGATATGAGAAGGGGTATCTCTGGTGGGCAAAAGAAGCGTGTAACAACCGGAGAAATGTTGGCTGGACCAGCGAAAGCATTTTTCATGGATGAAATCTCGACGGGGTTGGACAGTTCCACAACCTTTCAGATTACCAAGTTCATGAGGCAGATGGTTCATATTATGGATGTGACGATGGTCATCTCTCTCTTGCAGCCTGCGCCTGAGACATATGATCTTTTTGATGATATTATTCTTATTTCTGAGGGTCAGATTGTGTACCAAGGCCCGCGTGAGAATGTGCTTGAATTCTTCGAATATATGGGGTTCAGATGCCCTGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTGACCTCAAAGAAGGACCAAGAACAATACTGGTATCGGAAGAACCAACCTTATAGCTATATCTCGGTGCCAGATTTTGTAAACGCTTTCAGCTCTTTTCATATTGGTCAACAGCTTGTGGAAGAACTGAGAGTTCCATATGATAAAAGATCAGCCCATCCTGCTGCCTTGGTGAAGGAAAAGTATGGAATATCTAATATGGAGCTCTTCAAGGCATGCTTACAAAGGGAATGGCTGCTGATGCAGCGTAACTCTTTCGTATACATATTCAAAACTACGCAGATAACCATCATGGCAACAATTGCTTTCACGGTATTTTTAAGAACTGAAATGAAACATGGGAAAGAAGAGGATTCGGCAAGGTTTTGGGGAGCGCTGTTTTTCAGTCTCATCAATGTCATGTTTAATGGAGTGGCAGAACTTTCAATGACAGTTTTCAGGCTTCCGGTGTTCTTTAAACAGAGGGATGCCTTGTTCTACCCGGGGTGGGCTTTTGGGTTGCCCATTTGGCTAACCAGAATTCCCATTTCATTTATGGAATCTTTTATATGGATAGCTTTAACATATTACACCATAGGATTTGCACCTGCTGCCAGTAGGTTCTTCAAACAGTTCTTGGCTTTCTTTGGTATACATCAGATGGCAGTCTCCATGTTCCGTTTCATCGCTGCACTTGGAAGAACAGAAGTTGTTGCAAACACAATTGGTTCATTTACACTGCTATTGGTTTTTATTCTCGGAGGTTATATTGTTGCCAGAGATGATATTAAGCCGTGGATGATATGGGGGTTCTATTCATCACCTATGATGTATGGACAAAATGCAATTGCTATCAACGAATATCTCGATAAAAGATGGAGCGCTCCTCTCCCTAACGGCCGTATGCCCACTGTCGGACAGACCATTCTGAGGGAAAGAGGCCTGTTTACAGAAGAATATTGGTATTGGATTTGTATTGGAGCACTCATCGGGTTTTCGGTTCTTTTTAATGTTCTTTTCATTGGAGCACTGACCTTCTTAAATCCTCTTGGCGGTACCAAAACTCTGATCGATGATAATGGCTCTGAAACCGATAGTAAGCCACGATTGACATCCAATTCAGAAGGTATTGATATGCAAGTGCAAAATGCTCAAGGAAGTAGTTCAAATGATCAAGTGAAACGAGGAATGGTTCTGCCCTTCCAGCCCCTTTCACTAGCTTTCAACCATGTCAACTACTATGTCGATATGCCTCTGGAAATGAAAACCCAAGGGATTGAAGAGACTCGACTGCAACTACTTCGAGATGTTAGCGGTGCATTCAGGCCAGGTATCCTGACTGCATTAGTTGGTGTTAGTGGTGCTGGAAAAACTACCTTGATGGATGTCTTAGCTGGAAGAAAGACTGGCGGATACATTGAAGGAAGCATTAGCATCTCTGGATACCCAAAGAACCAAGCCACATTTGCTCGGGTCAGCGGTTATTGTGAACAAAACGACATTCATTCACCATATGTGACTGTTTATGAATCTCTCTTATACTCTGCTTGGCTGCGTCTTGCCCAGGACGTTACGAAGTCTACACGAAAGATGTTTGTTGATGAGGTTATGGATTTGGTCGAACTTAACCCGTTGAGAAATGCTTTAGTTGGACTTCCTGGAGTTGATGGACTTTCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCCAACCCTTCCATCATCTTCATGGATGAGCCGACATCAGGCCTTGACGCTAGAGCAGCTGCTATTGTTATGCGTACTGTAAGAAATACTGTGGATACCGGGCGAACTGTTGTTTGCACTATTCACCAGCCTAGCATTGACATTTTTGAAGCTTTTGATGAGTTGTTCTTAATGAAAAGAGGAGGACAAGTGATTTATGCTGGACCTCTAGGTCCCCAGTCCCACAAGCTTGTTGAATATTTCGAGGCAATTCCTGGAGTTCCCAAGATTAAAGAAGGCTACAATCCTGCTACTTGGATGTTAGAGGTCAGCTCAGCTGCAGTTGAGGCTCAAAACAATGTTGACTTCGCAGAAATTTTTGCAAATTCTGACCTCTATAGACAAAATCAGGAACTTATCGAGGAACTGAGCACACCACAACCTGGTTCTAGTGACCTTTACTTTCCCACCCAATACTCACAAAGTTTCATAACTCAATGCCATGCTTGCTTTTGGAAACAACACTGGTCGTACTGGAGGAACTCGAGATACAATGCCATTAGGTTTTTCATGACAGCTGGCATTGGCATACTATTTGGTGTTATCTTCTGGGGCAAAGGAGACTCCATACACAAACAACAAGACCTGATAAATCTTTTGGGAGCTACCTATTCCGCTGTTCTTTTCCTTGGAGCAAGCAATGCTAATGCTGTGCAATCTGTGGTTGCGATTGAGAGAACAGTTTTCTACCGTGAAAGAGCAGCAGGGATGTATTCAGAGTTACCTTATGCATTCGCTCAGGTTGCTATTGAGACAATTTACGTTGCAATCCAAACCTTTATGTATTCATGCCTTCTGTATTCTATGATCGGGTATGTTTGGACGGTGGAGAAGTTTTTGTACTTCTACTACTTCATATTCATGTGCTTTACCTACATGTCCATGTACGGAATGATGATGGTTGCACTAACTCCTGGCCATCAAATTGCTGCAATCGTTTCCTCCTTCTTCACGAGCTTCTGGAACTTGTTCTCTGGTTTCCTCATTTCCAGGCCGCTAATTCCGGTGTGGTGGAGGTGGTACTACTGGGGGTCTCCAATTGCTTGGTCAATCTATGGCATCTTCGCGTCTCAAGTTGGCGACAACAAGGATCCGATTGTAACTTCTCAGGGAAACGTGACAGTGGATGTGTTCATTAAAGATAACTTTGGTTATGACTACGACTTTTTAATCCCCGTGGTGTTTGCTCATATTGGTTGGGTCCTTCTCTTCTTCTTCGTCTTTGCCTACGGCATCAAGTACCTTAACTTCCAGAGGAGATAA

Protein Analysis

1452

Amino Acids

164.65

Weight (kDa)

6.56

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1951
AasI GACNNNNNNGTC 1 cut(s) 3264
Acc36I ACCTGC 2 cut(s) 860, 1951
Acc65I GGTACC 1 cut(s) 2390
AccB1I GGYRCC 4 cut(s) 449, 926, 1423, 2390
AccB7I CCANNNNNTGG 1 cut(s) 3476
AccBSI CCGCTC 1 cut(s) 567
AccI GTMKAC 4 cut(s) 80, 1617, 1987, 2915
AccII CGCG 3 cut(s) 783, 1276, 4160
AclWI GGATC 4 cut(s) 672, 878, 4178, 4191
AcoI YGGCCR 3 cut(s) 697, 2233, 4009
AcsI RAATTY 8 cut(s) 418, 475, 704, 713, 1292, 1875, 3408, 3418
AcuI CTGAAG 1 cut(s) 276
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 9 cut(s) 285, 1265, 2392, 3130, 3566, 3935, 3980, 4115, 4334
AfeI AGCGCT 2 cut(s) 1731, 2218
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 1 cut(s) 3969
AhlI ACTAGT 1 cut(s) 83
AjnI CCWGG 7 cut(s) 2662, 2898, 2992, 3307, 3475, 4006, 4082
AloI GAACNNNNNNTCC 2 cut(s) 1814, 1846
Alw21I GWGCWC 6 cut(s) 165, 460, 1563, 2320, 2365, 3467
Alw26I GTCTC 8 cut(s) 1205, 1748, 2008, 2612, 3648, 3839, 4131, 4167
AlwI GGATC 4 cut(s) 672, 878, 4178, 4191
Ama87I CYCGRG 3 cut(s) 1837, 2805, 3577
Aor51HI AGCGCT 2 cut(s) 1731, 2218
ApoI RAATTY 8 cut(s) 418, 475, 704, 713, 1292, 1875, 3408, 3418
ArsI GACNNNNNNTTYG 2 cut(s) 528, 560
Asp700I GAANNNNTTC 2 cut(s) 2497, 4061
Asp718I GGTACC 1 cut(s) 2390
AspLEI GCGC 3 cut(s) 1207, 1732, 2219
AspS9I GGNCC 8 cut(s) 171, 605, 1070, 1271, 1372, 3257, 3266, 4294
AsuC2I CCSGG 4 cut(s) 679, 1838, 1839, 3154
AsuHPI GGTGA 6 cut(s) 779, 1013, 1540, 2148, 2835, 3170
AsuII TTCGAA 1 cut(s) 1299
AvaI CYCGRG 3 cut(s) 1837, 2805, 3577
AvaII GGWCC 6 cut(s) 605, 1070, 1372, 3257, 3266, 4294
AxyI CCTNAGG 1 cut(s) 396
BalI TGGCCA 2 cut(s) 699, 4011
BamHI GGATCC 1 cut(s) 4183
BanI GGYRCC 4 cut(s) 449, 926, 1423, 2390
BanII GRGCYC 4 cut(s) 165, 367, 460, 1563
BarI GAAGNNNNNNTAC 3 cut(s) 3917, 3949, 4325
BauI CACGAG 1 cut(s) 4045
Bbv12I GWGCWC 6 cut(s) 165, 460, 1563, 2320, 2365, 3467
BceAI ACGGC 4 cut(s) 2113, 2220, 2248, 4339
BcgI CGANNNNNNTGC 2 cut(s) 2618, 2652
BciT130I CCWGG 7 cut(s) 2664, 2900, 2994, 3309, 3477, 4008, 4084
BciVI GTATCC 4 cut(s) 2678, 2741, 2771, 3142
BclI TGATCA 2 cut(s) 942, 2506
BcnI CCSGG 4 cut(s) 679, 1838, 1839, 3154
BcoDI GTCTC 8 cut(s) 1205, 1748, 2008, 2612, 3648, 3839, 4131, 4167
BcuI ACTAGT 1 cut(s) 83
BfmI CTRYAG 3 cut(s) 3042, 3372, 3430
BfoI RGCGCY 2 cut(s) 1733, 2220
BfrI CTTAAG 1 cut(s) 317
BfuAI ACCTGC 2 cut(s) 860, 1951
BfuI GTATCC 4 cut(s) 2678, 2741, 2771, 3142
BglI GCCNNNNNGGC 1 cut(s) 1864
BlpI GCTNAGC 1 cut(s) 3367
Bme18I GGWCC 6 cut(s) 605, 1070, 1372, 3257, 3266, 4294
BmeT110I CYCGRG 3 cut(s) 1837, 2805, 3577
BmgT120I GGNCC 8 cut(s) 171, 605, 1070, 1271, 1372, 3257, 3266, 4294
BmiI GGNNCC 7 cut(s) 451, 928, 1425, 2392, 3268, 4185, 4295
BmrI ACTGGG 2 cut(s) 3265, 4129
BmsI GCATC 9 cut(s) 427, 856, 886, 1307, 1587, 1813, 2778, 4161, 4335
BmuI ACTGGG 2 cut(s) 3265, 4129
BoxI GACNNNNGTC 1 cut(s) 1181
BplI GAGNNNNNCTC 4 cut(s) 2206, 2238, 3350, 3382
BpmI CTGGAG 4 cut(s) 93, 3015, 3330, 3589
Bpu10I CCTNAGC 2 cut(s) 359, 3831
Bpu1102I GCTNAGC 1 cut(s) 3367
Bpu14I TTCGAA 1 cut(s) 1299
BpuEI CTTGAG 4 cut(s) 149, 944, 2472, 4149
BpuMI CCSGG 4 cut(s) 679, 1838, 1839, 3154
Bsa29I ATCGAT 2 cut(s) 894, 2406
BsaBI GATNNNNATC 4 cut(s) 663, 1184, 1643, 2446
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 4131
BsaWI WCCGGW 3 cut(s) 1052, 1801, 4096
BsaXI ACNNNNNCTCC 4 cut(s) 152, 182, 3228, 3258
Bse1I ACTGG 8 cut(s) 795, 1391, 1950, 2746, 3271, 3563, 3572, 4124
Bse21I CCTNAGG 1 cut(s) 396
Bse3DI GCAATG 3 cut(s) 244, 3036, 3739
Bse8I GATNNNNATC 4 cut(s) 663, 1184, 1643, 2446
BseBI CCWGG 7 cut(s) 2664, 2900, 2994, 3309, 3477, 4008, 4084
BseCI ATCGAT 2 cut(s) 894, 2406
BseJI GATNNNNATC 4 cut(s) 663, 1184, 1643, 2446
BseMI GCAATG 3 cut(s) 244, 3036, 3739
BseNI ACTGG 8 cut(s) 795, 1391, 1950, 2746, 3271, 3563, 3572, 4124
BseRI GAGGAG 6 cut(s) 82, 167, 170, 173, 2211, 3249
BseX3I CGGCCG 1 cut(s) 2233
BsgI GTGCAG 1 cut(s) 2010
Bsh1236I CGCG 3 cut(s) 783, 1276, 4160
Bsh1285I CGRYCG 1 cut(s) 2236
BshNI GGYRCC 4 cut(s) 449, 926, 1423, 2390
BshVI ATCGAT 2 cut(s) 894, 2406
BsiEI CGRYCG 1 cut(s) 2236
BsiHKAI GWGCWC 6 cut(s) 165, 460, 1563, 2320, 2365, 3467
BsiHKCI CYCGRG 3 cut(s) 1837, 2805, 3577
BsiSI CCGG 8 cut(s) 52, 64, 678, 1053, 1802, 1838, 3153, 4097
BslFI GGGAC 3 cut(s) 513, 3252, 3259
BsmAI GTCTC 8 cut(s) 1205, 1748, 2008, 2612, 3648, 3839, 4131, 4167
BsmBI CGTCTC 1 cut(s) 4167
BsmFI GGGAC 3 cut(s) 513, 3252, 3259
BsmI GAATGC 4 cut(s) 109, 899, 2654, 3824
Bso31I GGTCTC 1 cut(s) 4131
BsoBI CYCGRG 3 cut(s) 1837, 2805, 3577
Bsp119I TTCGAA 1 cut(s) 1299
Bsp1286I GDGCHC 7 cut(s) 165, 367, 460, 1563, 2320, 2365, 3467
Bsp1720I GCTNAGC 1 cut(s) 3367
Bsp68I TCGCGA 1 cut(s) 783
BspDI ATCGAT 2 cut(s) 894, 2406
BspFNI CGCG 3 cut(s) 783, 1276, 4160
BspHI TCATGA 3 cut(s) 903, 1146, 3603
BspLI GGNNCC 7 cut(s) 451, 928, 1425, 2392, 3268, 4185, 4295
BspMAI CTGCAG 1 cut(s) 3376
BspMI ACCTGC 2 cut(s) 860, 1951
BspPI GGATC 4 cut(s) 672, 878, 4178, 4191
BspQI GCTCTTC 2 cut(s) 465, 1568
BspT104I TTCGAA 1 cut(s) 1299
BspT107I GGYRCC 4 cut(s) 449, 926, 1423, 2390
BspTI CTTAAG 1 cut(s) 317
BspTNI GGTCTC 1 cut(s) 4131
BsrBI CCGCTC 1 cut(s) 567
BsrDI GCAATG 3 cut(s) 244, 3036, 3739
BsrI ACTGG 8 cut(s) 795, 1391, 1950, 2746, 3271, 3563, 3572, 4124
BssNAI GTATAC 2 cut(s) 1618, 1988
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 4045
BssT1I CCWWGG 5 cut(s) 811, 1267, 1524, 2605, 3721
Bst1107I GTATAC 2 cut(s) 1618, 1988
Bst2BI CACGAG 1 cut(s) 4045
Bst2UI CCWGG 7 cut(s) 2664, 2900, 2994, 3309, 3477, 4008, 4084
Bst6I CTCTTC 7 cut(s) 347, 465, 850, 1568, 1698, 2610, 4307
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 317
BstAPI GCANNNNNTGC 3 cut(s) 1658, 1946, 3734
BstBI TTCGAA 1 cut(s) 1299
BstDSI CCRYGG 2 cut(s) 2129, 4269
BstEII GGTNACC 1 cut(s) 673
BstFNI CGCG 3 cut(s) 783, 1276, 4160
BstH2I RGCGCY 2 cut(s) 1733, 2220
BstHHI GCGC 3 cut(s) 1207, 1732, 2219
BstMAI GTCTC 8 cut(s) 1205, 1748, 2008, 2612, 3648, 3839, 4131, 4167
BstMCI CGRYCG 1 cut(s) 2236
BstNI CCWGG 7 cut(s) 2664, 2900, 2994, 3309, 3477, 4008, 4084
BstNSI RCATGY 2 cut(s) 1575, 3973
BstPAI GACNNNNGTC 1 cut(s) 1181
BstPI GGTNACC 1 cut(s) 673
BstSFI CTRYAG 3 cut(s) 3042, 3372, 3430
BstUI CGCG 3 cut(s) 783, 1276, 4160
BstX2I RGATCY 2 cut(s) 664, 4183
BstXI CCANNNNNNTGG 2 cut(s) 919, 4137
BstYI RGATCY 2 cut(s) 664, 4183
BstZ17I GTATAC 2 cut(s) 1618, 1988
BstZI CGGCCG 1 cut(s) 2233
Bsu15I ATCGAT 2 cut(s) 894, 2406
Bsu36I CCTNAGG 1 cut(s) 396
BsuI GTATCC 4 cut(s) 2678, 2741, 2771, 3142
BsuTUI ATCGAT 2 cut(s) 894, 2406
BtgI CCRYGG 2 cut(s) 2129, 4269
BtgZI GCGATG 1 cut(s) 2005
BtsI GCAGTG 2 cut(s) 593, 2072
BtsIMutI CAGTG 7 cut(s) 593, 788, 2072, 2244, 2363, 3556, 4221
BtuMI TCGCGA 1 cut(s) 783
BveI ACCTGC 2 cut(s) 860, 1951
CciI TCATGA 3 cut(s) 903, 1146, 3603
CfoI GCGC 3 cut(s) 1207, 1732, 2219
Cfr13I GGNCC 8 cut(s) 171, 605, 1070, 1271, 1372, 3257, 3266, 4294
Cfr9I CCCGGG 1 cut(s) 1837
ClaI ATCGAT 2 cut(s) 894, 2406
CseI GACGC 3 cut(s) 2879, 3110, 4149
CsiI ACCWGGT 1 cut(s) 3475
Csp6I GTAC 9 cut(s) 284, 1264, 2391, 3129, 3565, 3934, 3979, 4114, 4333
CviQI GTAC 9 cut(s) 284, 1264, 2391, 3129, 3565, 3934, 3979, 4114, 4333
DraI TTTAAA 1 cut(s) 1813
DrdI GACNNNNNNGTC 1 cut(s) 3264
DseDI GACNNNNNNGTC 1 cut(s) 3264
EaeI YGGCCR 3 cut(s) 697, 2233, 4009
EagI CGGCCG 1 cut(s) 2233
Eam1104I CTCTTC 7 cut(s) 347, 465, 850, 1568, 1698, 2610, 4307
EarI CTCTTC 7 cut(s) 347, 465, 850, 1568, 1698, 2610, 4307
EciI GGCGGA 1 cut(s) 2760
Ecl136II GAGCTC 3 cut(s) 163, 458, 1561
EclXI CGGCCG 1 cut(s) 2233
Eco130I CCWWGG 5 cut(s) 811, 1267, 1524, 2605, 3721
Eco147I AGGCCT 2 cut(s) 2277, 3096
Eco24I GRGCYC 4 cut(s) 165, 367, 460, 1563
Eco31I GGTCTC 1 cut(s) 4131
Eco47I GGWCC 6 cut(s) 605, 1070, 1372, 3257, 3266, 4294
Eco47III AGCGCT 2 cut(s) 1731, 2218
Eco52I CGGCCG 1 cut(s) 2233
Eco53kI GAGCTC 3 cut(s) 163, 458, 1561
Eco57I CTGAAG 1 cut(s) 276
Eco81I CCTNAGG 1 cut(s) 396
Eco88I CYCGRG 3 cut(s) 1837, 2805, 3577
Eco91I GGTNACC 1 cut(s) 673
EcoICRI GAGCTC 3 cut(s) 163, 458, 1561
EcoO109I RGGNCCY 2 cut(s) 3266, 4294
EcoO65I GGTNACC 1 cut(s) 673
EcoRI GAATTC 4 cut(s) 475, 704, 1292, 1875
EcoRII CCWGG 7 cut(s) 2662, 2898, 2992, 3307, 3475, 4006, 4082
EcoT14I CCWWGG 5 cut(s) 811, 1267, 1524, 2605, 3721
EcoT22I ATGCAT 3 cut(s) 442, 901, 3826
EcoT38I GRGCYC 4 cut(s) 165, 367, 460, 1563
ErhI CCWWGG 5 cut(s) 811, 1267, 1524, 2605, 3721
Esp3I CGTCTC 1 cut(s) 4167
FalI AAGNNNNNCTT 2 cut(s) 1559, 1591
FaqI GGGAC 3 cut(s) 513, 3252, 3259
FauI CCCGC 1 cut(s) 1281
FauNDI CATATG 4 cut(s) 442, 1216, 1495, 2848
FbaI TGATCA 2 cut(s) 942, 2506
FblI GTMKAC 4 cut(s) 80, 1617, 1987, 2915
FriOI GRGCYC 4 cut(s) 165, 367, 460, 1563
GlaI GCGC 3 cut(s) 1206, 1731, 2218
GsuI CTGGAG 4 cut(s) 93, 3015, 3330, 3589
HaeII RGCGCY 2 cut(s) 1733, 2220
HapII CCGG 8 cut(s) 52, 64, 678, 1053, 1802, 1838, 3153, 4097
HgaI GACGC 3 cut(s) 2879, 3110, 4149
HhaI GCGC 3 cut(s) 1207, 1732, 2219
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 1205, 1730, 2217
HinP1I GCGC 3 cut(s) 1205, 1730, 2217
HincII GTYRAC 3 cut(s) 1466, 2569, 3397
HindII GTYRAC 3 cut(s) 1466, 2569, 3397
HindIII AAGCTT 2 cut(s) 3204, 3281
HinfI GANTC 7 cut(s) 519, 540, 1709, 1895, 2620, 2864, 3656
HpaII CCGG 8 cut(s) 52, 64, 678, 1053, 1802, 1838, 3153, 4097
HphI GGTGA 6 cut(s) 779, 1013, 1540, 2148, 2835, 3170
Hpy99I CGWCG 1 cut(s) 1108
HpyCH4IV ACGT 5 cut(s) 194, 805, 2904, 3855, 4209
HpySE526I ACGT 5 cut(s) 194, 805, 2904, 3855, 4209
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 1205, 1730, 2217
KpnI GGTACC 1 cut(s) 2394
Ksp22I TGATCA 2 cut(s) 942, 2506
LguI GCTCTTC 2 cut(s) 465, 1568
LweI GCATC 9 cut(s) 427, 856, 886, 1307, 1587, 1813, 2778, 4161, 4335
MabI ACCWGGT 1 cut(s) 3475
MaeII ACGT 5 cut(s) 194, 805, 2904, 3855, 4209
MbiI CCGCTC 1 cut(s) 567
MfeI CAATTG 4 cut(s) 1656, 2058, 2181, 4131
MflI RGATCY 2 cut(s) 664, 4183
MhlI GDGCHC 7 cut(s) 165, 367, 460, 1563, 2320, 2365, 3467
MlsI TGGCCA 2 cut(s) 699, 4011
MluNI TGGCCA 2 cut(s) 699, 4011
MlyI GAGTC 4 cut(s) 513, 549, 2614, 3650
MmeI TCCRAC 5 cut(s) 488, 799, 1092, 2230, 2965
Mox20I TGGCCA 2 cut(s) 699, 4011
Mph1103I ATGCAT 3 cut(s) 442, 901, 3826
MroXI GAANNNNTTC 2 cut(s) 2497, 4061
MscI TGGCCA 2 cut(s) 699, 4011
MslI CAYNNNNRTG 5 cut(s) 765, 917, 3074, 3953, 3974
Msp20I TGGCCA 2 cut(s) 699, 4011
MspA1I CMGCKG 6 cut(s) 124, 2814, 3113, 3371, 3611, 3710
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 8 cut(s) 52, 64, 678, 1053, 1802, 1838, 3153, 4097
MunI CAATTG 4 cut(s) 1656, 2058, 2181, 4131
Mva1269I GAATGC 4 cut(s) 109, 899, 2654, 3824
MvaI CCWGG 7 cut(s) 2664, 2900, 2994, 3309, 3477, 4008, 4084
MvnI CGCG 3 cut(s) 783, 1276, 4160
NciI CCSGG 4 cut(s) 679, 1838, 1839, 3154
NdeI CATATG 4 cut(s) 442, 1216, 1495, 2848
NlaIV GGNNCC 7 cut(s) 451, 928, 1425, 2392, 3268, 4185, 4295
NmuCI GTSAC 8 cut(s) 6, 250, 685, 1174, 1357, 2851, 3485, 4210
NruI TCGCGA 1 cut(s) 783
NsiI ATGCAT 3 cut(s) 442, 901, 3826
NspI RCATGY 2 cut(s) 1575, 3973
NspV TTCGAA 1 cut(s) 1299
PaeI GCATGC 1 cut(s) 1575
PaeR7I CTCGAG 1 cut(s) 3577
PagI TCATGA 3 cut(s) 903, 1146, 3603
PaqCI CACCTGC 1 cut(s) 1951
PceI AGGCCT 2 cut(s) 2277, 3096
PciI ACATGT 1 cut(s) 3969
PciSI GCTCTTC 2 cut(s) 465, 1568
PcsI WCGNNNNNNNCGW 1 cut(s) 2199
PctI GAATGC 4 cut(s) 109, 899, 2654, 3824
PdmI GAANNNNTTC 2 cut(s) 2497, 4061
PfeI GAWTC 3 cut(s) 1709, 1895, 2864
PflFI GACNNNGTC 1 cut(s) 377
PflMI CCANNNNNTGG 1 cut(s) 3476
PfoI TCCNGGA 2 cut(s) 2992, 3307
PleI GAGTC 4 cut(s) 513, 548, 2614, 3650
PpsI GAGTC 4 cut(s) 513, 548, 2614, 3650
PpuMI RGGWCCY 2 cut(s) 3266, 4294
PscI ACATGT 1 cut(s) 3969
PshAI GACNNNNGTC 1 cut(s) 1181
Psp124BI GAGCTC 3 cut(s) 165, 460, 1563
Psp5II RGGWCCY 2 cut(s) 3266, 4294
Psp6I CCWGG 7 cut(s) 2662, 2898, 2992, 3307, 3475, 4006, 4082
PspEI GGTNACC 1 cut(s) 673
PspGI CCWGG 7 cut(s) 2662, 2898, 2992, 3307, 3475, 4006, 4082
PspN4I GGNNCC 7 cut(s) 451, 928, 1425, 2392, 3268, 4185, 4295
PspPI GGNCC 8 cut(s) 171, 605, 1070, 1271, 1372, 3257, 3266, 4294
PspPPI RGGWCCY 2 cut(s) 3266, 4294
PsrI GAACNNNNNNTAC 2 cut(s) 3566, 3598
PstI CTGCAG 1 cut(s) 3376
PsuI RGATCY 2 cut(s) 664, 4183
PsyI GACNNNGTC 1 cut(s) 377
PvuII CAGCTG 3 cut(s) 3113, 3371, 3611
RruI TCGCGA 1 cut(s) 783
RsaI GTAC 9 cut(s) 285, 1265, 2392, 3130, 3566, 3935, 3980, 4115, 4334
RsaNI GTAC 9 cut(s) 284, 1264, 2391, 3129, 3565, 3934, 3979, 4114, 4333
RseI CAYNNNNRTG 5 cut(s) 765, 917, 3074, 3953, 3974
SacI GAGCTC 3 cut(s) 165, 460, 1563
SapI GCTCTTC 2 cut(s) 465, 1568
Sau96I GGNCC 8 cut(s) 171, 605, 1070, 1271, 1372, 3257, 3266, 4294
SchI GAGTC 4 cut(s) 513, 549, 2614, 3650
SduI GDGCHC 7 cut(s) 165, 367, 460, 1563, 2320, 2365, 3467
SexAI ACCWGGT 1 cut(s) 3475
SfaNI GCATC 9 cut(s) 427, 856, 886, 1307, 1587, 1813, 2778, 4161, 4335
SfcI CTRYAG 3 cut(s) 3042, 3372, 3430
Sfr274I CTCGAG 1 cut(s) 3577
SfuI TTCGAA 1 cut(s) 1299
SinI GGWCC 6 cut(s) 605, 1070, 1372, 3257, 3266, 4294
SlaI CTCGAG 1 cut(s) 3577
SmaI CCCGGG 1 cut(s) 1839
SmiMI CAYNNNNRTG 5 cut(s) 765, 917, 3074, 3953, 3974
SmlI CTYRAG 6 cut(s) 164, 317, 959, 2487, 3577, 4164
SmoI CTYRAG 6 cut(s) 164, 317, 959, 2487, 3577, 4164
SpeI ACTAGT 1 cut(s) 83
SphI GCATGC 1 cut(s) 1575
SseBI AGGCCT 2 cut(s) 2277, 3096
SspI AATATT 2 cut(s) 2294, 3293
SstI GAGCTC 3 cut(s) 165, 460, 1563
StuI AGGCCT 2 cut(s) 2277, 3096
StyI CCWWGG 5 cut(s) 811, 1267, 1524, 2605, 3721
TaiI ACGT 5 cut(s) 197, 808, 2907, 3858, 4212
TatI WGTACW 1 cut(s) 3933
TauI GCSGC 2 cut(s) 176, 4090
TfiI GAWTC 3 cut(s) 1709, 1895, 2864
TscAI CASTG 7 cut(s) 600, 795, 2079, 2251, 2370, 3563, 4221
TseFI GTSAC 8 cut(s) 6, 250, 685, 1174, 1357, 2851, 3485, 4210
Tsp45I GTSAC 8 cut(s) 6, 250, 685, 1174, 1357, 2851, 3485, 4210
TspGWI ACGGA 2 cut(s) 2003, 3996
TspMI CCCGGG 1 cut(s) 1837
TspRI CASTG 7 cut(s) 600, 795, 2079, 2251, 2370, 3563, 4221
Tth111I GACNNNGTC 1 cut(s) 377
Van91I CCANNNNNTGG 1 cut(s) 3476
Vha464I CTTAAG 1 cut(s) 317
VpaK11BI GGWCC 6 cut(s) 605, 1070, 1372, 3257, 3266, 4294
XapI RAATTY 8 cut(s) 418, 475, 704, 713, 1292, 1875, 3408, 3418
XbaI TCTAGA 1 cut(s) 851
XceI RCATGY 2 cut(s) 1575, 3973
XcmI CCANNNNNNNNNTGG 2 cut(s) 1888, 3073
XhoI CTCGAG 1 cut(s) 3577
XmaI CCCGGG 1 cut(s) 1837
XmiI GTMKAC 4 cut(s) 80, 1617, 1987, 2915
XmnI GAANNNNTTC 2 cut(s) 2497, 4061
Zsp2I ATGCAT 3 cut(s) 442, 901, 3826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.