Pleiotropic drug resistance protein 2-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_trans_N | PF14510 | 107 - 156 | 2.5e-06 | ABC-transporter N-terminal |
| ABC_tran | PF00005 | 182 - 320 | 4.8e-08 | ABC transporter |
| Retrotran_gag_3 | PF14244 | 319 - 350 | 2.1e-06 | gag-polypeptide of LTR copia-type |
| Retrotran_gag_2 | PF14223 | 351 - 511 | 1e-09 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 677 - 745 | 4.5e-13 | Pol polyprotein, beta-barrel domain |
| ABC2_membrane | PF01061 | 1189 - 1401 | 5e-44 | ABC-2 type transporter |
| PDR_assoc | PF08370 | 1406 - 1463 | 1.5e-21 | Plant PDR ABC transporter associated |
| ABC_tran | PF00005 | 1512 - 1664 | 8.6e-20 | ABC transporter |
| ABC2_membrane | PF01061 | 1809 - 2022 | 1.9e-54 | ABC-2 type transporter |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 121, 3955 |
| Acc36I | ACCTGC | 4 cut(s) | 121, 847, 2431, 3955 |
| AccB1I | GGYRCC | 1 cut(s) | 2132 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1670, 2842, 6003 |
| AccBSI | CCGCTC | 2 cut(s) | 558, 5627 |
| AccI | GTMKAC | 5 cut(s) | 71, 2037, 2648, 3991, 4773 |
| AccII | CGCG | 5 cut(s) | 98, 1240, 1512, 4322, 4522 |
| AccIII | TCCGGA | 1 cut(s) | 791 |
| AclI | AACGTT | 3 cut(s) | 534, 952, 1500 |
| AcoI | YGGCCR | 4 cut(s) | 165, 688, 2929, 3466 |
| AcuI | CTGAAG | 4 cut(s) | 1274, 1410, 3664, 4289 |
| AcvI | CACGTG | 1 cut(s) | 2781 |
| AdeI | CACNNNGTG | 1 cut(s) | 1648 |
| AfeI | AGCGCT | 1 cut(s) | 633 |
| AflII | CTTAAG | 1 cut(s) | 6131 |
| AflIII | ACRYGT | 4 cut(s) | 1212, 3046, 3218, 5754 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 51, 4992 |
| AhlI | ACTAGT | 1 cut(s) | 2608 |
| AjiI | CACGTC | 1 cut(s) | 1028 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3054, 3086, 4236, 4268 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 5977, 6009 |
| Alw21I | GWGCWC | 6 cut(s) | 156, 451, 962, 969, 1744, 4223 |
| Alw26I | GTCTC | 8 cut(s) | 1203, 1807, 2122, 3427, 3752, 4289, 5178, 5738 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 349, 2705, 2828, 2891 |
| Ama87I | CYCGRG | 2 cut(s) | 4127, 4704 |
| Aor13HI | TCCGGA | 1 cut(s) | 791 |
| Aor51HI | AGCGCT | 1 cut(s) | 633 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 5282, 5314 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 3086, 5960, 6125 |
| AspA2I | CCTAGG | 2 cut(s) | 4096, 5161 |
| AspLEI | GCGC | 6 cut(s) | 100, 634, 1240, 2822, 4322, 4324 |
| AsuC2I | CCSGG | 3 cut(s) | 40, 2653, 3326 |
| AsuII | TTCGAA | 1 cut(s) | 3303 |
| AvaI | CYCGRG | 2 cut(s) | 4127, 4704 |
| AvrII | CCTAGG | 2 cut(s) | 4096, 5161 |
| AxyI | CCTNAGG | 1 cut(s) | 2464 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2985, 3018 |
| BalI | TGGCCA | 3 cut(s) | 690, 2931, 3468 |
| BamHI | GGATCC | 1 cut(s) | 2619 |
| BanI | GGYRCC | 1 cut(s) | 2132 |
| BanII | GRGCYC | 3 cut(s) | 156, 962, 4443 |
| BarI | GAAGNNNNNNTAC | 5 cut(s) | 1751, 1783, 3527, 3559, 6227 |
| BauI | CACGAG | 2 cut(s) | 999, 3279 |
| BbrPI | CACGTG | 1 cut(s) | 2781 |
| BbsI | GAAGAC | 2 cut(s) | 1401, 4784 |
| Bbv12I | GWGCWC | 6 cut(s) | 156, 451, 962, 969, 1744, 4223 |
| BbvCI | CCTCAGC | 1 cut(s) | 212 |
| BceAI | ACGGC | 5 cut(s) | 2004, 3528, 4117, 4925, 6241 |
| BciVI | GTATCC | 5 cut(s) | 928, 2687, 4670, 5041, 5594 |
| BclI | TGATCA | 2 cut(s) | 2053, 2946 |
| BcnI | CCSGG | 3 cut(s) | 40, 2653, 3326 |
| BcoDI | GTCTC | 8 cut(s) | 1203, 1807, 2122, 3427, 3752, 4289, 5178, 5738 |
| BcuI | ACTAGT | 1 cut(s) | 2608 |
| BfaI | CTAG | 9 cut(s) | 1830, 2609, 2856, 3954, 4097, 5004, 5085, 5162, 6086 |
| BfmI | CTRYAG | 4 cut(s) | 1345, 1905, 3426, 5329 |
| BfoI | RGCGCY | 1 cut(s) | 635 |
| BfrI | CTTAAG | 1 cut(s) | 6131 |
| BfuAI | ACCTGC | 4 cut(s) | 121, 847, 2431, 3955 |
| BfuI | GTATCC | 5 cut(s) | 928, 2687, 4670, 5041, 5594 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 893, 3868, 5279 |
| BglII | AGATCT | 4 cut(s) | 1222, 1261, 1564, 2299 |
| BlnI | CCTAGG | 2 cut(s) | 4096, 5161 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 51, 4992 |
| BmeT110I | CYCGRG | 2 cut(s) | 4127, 4704 |
| BmgBI | CACGTC | 1 cut(s) | 1028 |
| BmrI | ACTGGG | 1 cut(s) | 6028 |
| BmuI | ACTGGG | 1 cut(s) | 6028 |
| BoxI | GACNNNNGTC | 2 cut(s) | 3185, 6086 |
| BpiI | GAAGAC | 2 cut(s) | 1401, 4784 |
| BpmI | CTGGAG | 1 cut(s) | 5488 |
| Bpu10I | CCTNAGC | 1 cut(s) | 212 |
| Bpu14I | TTCGAA | 1 cut(s) | 3303 |
| BpuEI | CTTGAG | 5 cut(s) | 140, 816, 1761, 2161, 2948 |
| BpuMI | CCSGG | 3 cut(s) | 40, 2653, 3326 |
| Bsa29I | ATCGAT | 2 cut(s) | 255, 2898 |
| BsaAI | YACGTR | 3 cut(s) | 2781, 4477, 5755 |
| BsaBI | GATNNNNATC | 2 cut(s) | 3647, 4190 |
| BsaI | GGTCTC | 1 cut(s) | 5178 |
| BsaWI | WCCGGW | 4 cut(s) | 791, 2873, 3056, 3805 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 20, 50, 143, 173, 1787, 1817, 5127, 5157 |
| Bse21I | CCTNAGG | 1 cut(s) | 2464 |
| Bse3DI | GCAATG | 6 cut(s) | 235, 2413, 2544, 4023, 4076, 5638 |
| Bse8I | GATNNNNATC | 2 cut(s) | 3647, 4190 |
| BseAI | TCCGGA | 1 cut(s) | 791 |
| BseCI | ATCGAT | 2 cut(s) | 255, 2898 |
| BseJI | GATNNNNATC | 2 cut(s) | 3647, 4190 |
| BseMI | GCAATG | 6 cut(s) | 235, 2413, 2544, 4023, 4076, 5638 |
| BsePI | GCGCGC | 1 cut(s) | 4320 |
| BseRI | GAGGAG | 5 cut(s) | 158, 161, 164, 1764, 5148 |
| BseYI | CCCAGC | 2 cut(s) | 23, 5696 |
| BsgI | GTGCAG | 3 cut(s) | 2737, 3192, 5053 |
| Bsh1236I | CGCG | 5 cut(s) | 98, 1240, 1512, 4322, 4522 |
| BshNI | GGYRCC | 1 cut(s) | 2132 |
| BshVI | ATCGAT | 2 cut(s) | 255, 2898 |
| BsiHKAI | GWGCWC | 6 cut(s) | 156, 451, 962, 969, 1744, 4223 |
| BsiHKCI | CYCGRG | 2 cut(s) | 4127, 4704 |
| BsiSI | CCGG | 7 cut(s) | 40, 792, 2652, 2874, 3057, 3326, 3806 |
| BslFI | GGGAC | 9 cut(s) | 22, 609, 1087, 1818, 1897, 2192, 4214, 5895, 5963 |
| BsmAI | GTCTC | 8 cut(s) | 1203, 1807, 2122, 3427, 3752, 4289, 5178, 5738 |
| BsmFI | GGGAC | 9 cut(s) | 22, 609, 1087, 1818, 1897, 2192, 4214, 5895, 5963 |
| BsmI | GAATGC | 3 cut(s) | 507, 1543, 2581 |
| Bso31I | GGTCTC | 1 cut(s) | 5178 |
| BsoBI | CYCGRG | 2 cut(s) | 4127, 4704 |
| Bsp119I | TTCGAA | 1 cut(s) | 3303 |
| Bsp1286I | GDGCHC | 7 cut(s) | 156, 451, 962, 969, 1744, 4223, 4443 |
| Bsp13I | TCCGGA | 1 cut(s) | 791 |
| Bsp1407I | TGTACA | 2 cut(s) | 3621, 3637 |
| Bsp68I | TCGCGA | 1 cut(s) | 4522 |
| BspDI | ATCGAT | 2 cut(s) | 255, 2898 |
| BspEI | TCCGGA | 1 cut(s) | 791 |
| BspFNI | CGCG | 5 cut(s) | 98, 1240, 1512, 4322, 4522 |
| BspHI | TCATGA | 6 cut(s) | 1533, 1894, 2907, 3150, 5502, 5943 |
| BspMAI | CTGCAG | 1 cut(s) | 1909 |
| BspMI | ACCTGC | 4 cut(s) | 121, 847, 2431, 3955 |
| BspQI | GCTCTTC | 3 cut(s) | 1732, 2780, 4493 |
| BspT104I | TTCGAA | 1 cut(s) | 3303 |
| BspT107I | GGYRCC | 1 cut(s) | 2132 |
| BspTI | CTTAAG | 1 cut(s) | 6131 |
| BspTNI | GGTCTC | 1 cut(s) | 5178 |
| BsrBI | CCGCTC | 2 cut(s) | 558, 5627 |
| BsrDI | GCAATG | 6 cut(s) | 235, 2413, 2544, 4023, 4076, 5638 |
| BsrGI | TGTACA | 2 cut(s) | 3621, 3637 |
| BssHII | GCGCGC | 1 cut(s) | 4320 |
| BssNAI | GTATAC | 2 cut(s) | 3992, 4774 |
| BssSI | CACGAG | 2 cut(s) | 999, 3279 |
| Bst1107I | GTATAC | 2 cut(s) | 3992, 4774 |
| Bst2BI | CACGAG | 2 cut(s) | 999, 3279 |
| BstAFI | CTTAAG | 1 cut(s) | 6131 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 20, 3581, 5439 |
| BstAUI | TGTACA | 2 cut(s) | 3621, 3637 |
| BstBAI | YACGTR | 3 cut(s) | 2781, 4477, 5755 |
| BstBI | TTCGAA | 1 cut(s) | 3303 |
| BstDSI | CCRYGG | 3 cut(s) | 1359, 2020, 4133 |
| BstEII | GGTNACC | 1 cut(s) | 2768 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 4268, 5467 |
| BstFNI | CGCG | 5 cut(s) | 98, 1240, 1512, 4322, 4522 |
| BstH2I | RGCGCY | 1 cut(s) | 635 |
| BstHHI | GCGC | 6 cut(s) | 100, 634, 1240, 2822, 4322, 4324 |
| BstMAI | GTCTC | 8 cut(s) | 1203, 1807, 2122, 3427, 3752, 4289, 5178, 5738 |
| BstNSI | RCATGY | 4 cut(s) | 1216, 2207, 3579, 5368 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 3185, 6086 |
| BstPI | GGTNACC | 1 cut(s) | 2768 |
| BstSFI | CTRYAG | 4 cut(s) | 1345, 1905, 3426, 5329 |
| BstUI | CGCG | 5 cut(s) | 98, 1240, 1512, 4322, 4522 |
| BstV2I | GAAGAC | 2 cut(s) | 1401, 4784 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2002, 6036 |
| BstZ17I | GTATAC | 2 cut(s) | 3992, 4774 |
| Bsu15I | ATCGAT | 2 cut(s) | 255, 2898 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2464 |
| BsuI | GTATCC | 5 cut(s) | 928, 2687, 4670, 5041, 5594 |
| BsuTUI | ATCGAT | 2 cut(s) | 255, 2898 |
| BtgI | CCRYGG | 3 cut(s) | 1359, 2020, 4133 |
| BtgZI | GCGATG | 1 cut(s) | 6087 |
| BtrI | CACGTC | 1 cut(s) | 1028 |
| BtsI | GCAGTG | 4 cut(s) | 458, 584, 828, 1995 |
| BtuMI | TCGCGA | 1 cut(s) | 4522 |
| BveI | ACCTGC | 4 cut(s) | 121, 847, 2431, 3955 |
| CaiI | CAGNNNCTG | 4 cut(s) | 349, 2705, 2828, 2891 |
| CciI | TCATGA | 6 cut(s) | 1533, 1894, 2907, 3150, 5502, 5943 |
| CfoI | GCGC | 6 cut(s) | 100, 634, 1240, 2822, 4322, 4324 |
| ClaI | ATCGAT | 2 cut(s) | 255, 2898 |
| DraI | TTTAAA | 2 cut(s) | 1380, 3817 |
| DraIII | CACNNNGTG | 1 cut(s) | 1648 |
| DriI | GACNNNNNGTC | 2 cut(s) | 51, 4992 |
| EaeI | YGGCCR | 4 cut(s) | 165, 688, 2929, 3466 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 51, 4992 |
| Ecl136II | GAGCTC | 2 cut(s) | 154, 960 |
| Eco147I | AGGCCT | 2 cut(s) | 4281, 4561 |
| Eco24I | GRGCYC | 3 cut(s) | 156, 962, 4443 |
| Eco31I | GGTCTC | 1 cut(s) | 5178 |
| Eco32I | GATATC | 1 cut(s) | 1060 |
| Eco47III | AGCGCT | 1 cut(s) | 633 |
| Eco53kI | GAGCTC | 2 cut(s) | 154, 960 |
| Eco57I | CTGAAG | 4 cut(s) | 1274, 1410, 3664, 4289 |
| Eco72I | CACGTG | 1 cut(s) | 2781 |
| Eco81I | CCTNAGG | 1 cut(s) | 2464 |
| Eco88I | CYCGRG | 2 cut(s) | 4127, 4704 |
| Eco91I | GGTNACC | 1 cut(s) | 2768 |
| EcoICRI | GAGCTC | 2 cut(s) | 154, 960 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 4268, 5467 |
| EcoO109I | RGGNCCY | 5 cut(s) | 596, 836, 1441, 4261, 6196 |
| EcoO65I | GGTNACC | 1 cut(s) | 2768 |
| EcoRI | GAATTC | 5 cut(s) | 977, 1135, 3296, 3879, 5473 |
| EcoRV | GATATC | 1 cut(s) | 1060 |
| EcoT22I | ATGCAT | 6 cut(s) | 433, 2074, 2205, 2415, 2583, 5725 |
| EcoT38I | GRGCYC | 3 cut(s) | 156, 962, 4443 |
| FaqI | GGGAC | 9 cut(s) | 22, 609, 1087, 1818, 1897, 2192, 4214, 5895, 5963 |
| FauI | CCCGC | 1 cut(s) | 5620 |
| FauNDI | CATATG | 6 cut(s) | 187, 433, 2838, 3309, 3908, 4464 |
| FbaI | TGATCA | 2 cut(s) | 2053, 2946 |
| FblI | GTMKAC | 5 cut(s) | 71, 2037, 2648, 3991, 4773 |
| FriOI | GRGCYC | 3 cut(s) | 156, 962, 4443 |
| FspBI | CTAG | 9 cut(s) | 1830, 2609, 2856, 3954, 4097, 5004, 5085, 5162, 6086 |
| GlaI | GCGC | 6 cut(s) | 99, 633, 1239, 2821, 4321, 4323 |
| GsaI | CCCAGC | 2 cut(s) | 27, 5700 |
| GsuI | CTGGAG | 1 cut(s) | 5488 |
| HaeII | RGCGCY | 1 cut(s) | 635 |
| HapII | CCGG | 7 cut(s) | 40, 792, 2652, 2874, 3057, 3326, 3806 |
| HhaI | GCGC | 6 cut(s) | 100, 634, 1240, 2822, 4322, 4324 |
| Hin6I | GCGC | 6 cut(s) | 98, 632, 1238, 2820, 4320, 4322 |
| HinP1I | GCGC | 6 cut(s) | 98, 632, 1238, 2820, 4320, 4322 |
| HincII | GTYRAC | 1 cut(s) | 2038 |
| HindII | GTYRAC | 1 cut(s) | 2038 |
| HindIII | AAGCTT | 2 cut(s) | 236, 5416 |
| HpaII | CCGG | 7 cut(s) | 40, 792, 2652, 2874, 3057, 3326, 3806 |
| Hpy99I | CGWCG | 1 cut(s) | 5519 |
| HspAI | GCGC | 6 cut(s) | 98, 632, 1238, 2820, 4320, 4322 |
| Kpn2I | TCCGGA | 1 cut(s) | 791 |
| Ksp22I | TGATCA | 2 cut(s) | 2053, 2946 |
| LguI | GCTCTTC | 3 cut(s) | 1732, 2780, 4493 |
| MaeI | CTAG | 9 cut(s) | 1830, 2609, 2856, 3954, 4097, 5004, 5085, 5162, 6086 |
| MbiI | CCGCTC | 2 cut(s) | 558, 5627 |
| MfeI | CAATTG | 2 cut(s) | 5809, 5925 |
| MhlI | GDGCHC | 7 cut(s) | 156, 451, 962, 969, 1744, 4223, 4443 |
| MlsI | TGGCCA | 3 cut(s) | 690, 2931, 3468 |
| MluNI | TGGCCA | 3 cut(s) | 690, 2931, 3468 |
| MlyI | GAGTC | 5 cut(s) | 2033, 2696, 4518, 4526, 6076 |
| MmeI | TCCRAC | 9 cut(s) | 479, 790, 1534, 2372, 3052, 4234, 4552, 4864, 5497 |
| Mox20I | TGGCCA | 3 cut(s) | 690, 2931, 3468 |
| Mph1103I | ATGCAT | 6 cut(s) | 433, 2074, 2205, 2415, 2583, 5725 |
| MroI | TCCGGA | 1 cut(s) | 791 |
| MroXI | GAANNNNTTC | 3 cut(s) | 3086, 5960, 6125 |
| MscI | TGGCCA | 3 cut(s) | 690, 2931, 3468 |
| MslI | CAYNNNNRTG | 3 cut(s) | 756, 4973, 5852 |
| Msp20I | TGGCCA | 3 cut(s) | 690, 2931, 3468 |
| MspA1I | CMGCKG | 3 cut(s) | 1252, 4241, 4713 |
| MspCI | CTTAAG | 1 cut(s) | 6131 |
| MspI | CCGG | 7 cut(s) | 40, 792, 2652, 2874, 3057, 3326, 3806 |
| MunI | CAATTG | 2 cut(s) | 5809, 5925 |
| Mva1269I | GAATGC | 3 cut(s) | 507, 1543, 2581 |
| MvnI | CGCG | 5 cut(s) | 98, 1240, 1512, 4322, 4522 |
| NciI | CCSGG | 3 cut(s) | 40, 2653, 3326 |
| NdeI | CATATG | 6 cut(s) | 187, 433, 2838, 3309, 3908, 4464 |
| NmeAIII | GCCGAG | 3 cut(s) | 1896, 2283, 3987 |
| NmuCI | GTSAC | 8 cut(s) | 133, 676, 996, 1956, 2776, 3178, 3361, 4804 |
| NruI | TCGCGA | 1 cut(s) | 4522 |
| NsiI | ATGCAT | 6 cut(s) | 433, 2074, 2205, 2415, 2583, 5725 |
| NspI | RCATGY | 4 cut(s) | 1216, 2207, 3579, 5368 |
| NspV | TTCGAA | 1 cut(s) | 3303 |
| PaeI | GCATGC | 2 cut(s) | 3579, 5368 |
| PaeR7I | CTCGAG | 1 cut(s) | 4127 |
| PagI | TCATGA | 6 cut(s) | 1533, 1894, 2907, 3150, 5502, 5943 |
| PaqCI | CACCTGC | 2 cut(s) | 121, 3955 |
| PauI | GCGCGC | 1 cut(s) | 4320 |
| PceI | AGGCCT | 2 cut(s) | 4281, 4561 |
| PciI | ACATGT | 1 cut(s) | 1212 |
| PciSI | GCTCTTC | 3 cut(s) | 1732, 2780, 4493 |
| PctI | GAATGC | 3 cut(s) | 507, 1543, 2581 |
| PdmI | GAANNNNTTC | 3 cut(s) | 3086, 5960, 6125 |
| PflFI | GACNNNGTC | 1 cut(s) | 1799 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1670, 2842, 6003 |
| PfoI | TCCNGGA | 1 cut(s) | 4891 |
| PleI | GAGTC | 5 cut(s) | 2033, 2696, 4518, 4525, 6076 |
| PmaCI | CACGTG | 1 cut(s) | 2781 |
| PmlI | CACGTG | 1 cut(s) | 2781 |
| PpsI | GAGTC | 5 cut(s) | 2033, 2696, 4518, 4525, 6076 |
| Ppu21I | YACGTR | 3 cut(s) | 2781, 4477, 5755 |
| PpuMI | RGGWCCY | 5 cut(s) | 596, 836, 1441, 4261, 6196 |
| PscI | ACATGT | 1 cut(s) | 1212 |
| PshAI | GACNNNNGTC | 2 cut(s) | 3185, 6086 |
| Psp124BI | GAGCTC | 2 cut(s) | 156, 962 |
| Psp1406I | AACGTT | 3 cut(s) | 534, 952, 1500 |
| Psp5II | RGGWCCY | 5 cut(s) | 596, 836, 1441, 4261, 6196 |
| PspCI | CACGTG | 1 cut(s) | 2781 |
| PspEI | GGTNACC | 1 cut(s) | 2768 |
| PspFI | CCCAGC | 2 cut(s) | 23, 5696 |
| PspPPI | RGGWCCY | 5 cut(s) | 596, 836, 1441, 4261, 6196 |
| PspXI | VCTCGAGB | 1 cut(s) | 4127 |
| PstI | CTGCAG | 1 cut(s) | 1909 |
| PstNI | CAGNNNCTG | 4 cut(s) | 349, 2705, 2828, 2891 |
| PsyI | GACNNNGTC | 1 cut(s) | 1799 |
| PteI | GCGCGC | 1 cut(s) | 4320 |
| PvuII | CAGCTG | 1 cut(s) | 1252 |
| RruI | TCGCGA | 1 cut(s) | 4522 |
| RseI | CAYNNNNRTG | 3 cut(s) | 756, 4973, 5852 |
| SacI | GAGCTC | 2 cut(s) | 156, 962 |
| SalI | GTCGAC | 1 cut(s) | 2036 |
| SapI | GCTCTTC | 3 cut(s) | 1732, 2780, 4493 |
| SchI | GAGTC | 5 cut(s) | 2033, 2696, 4518, 4526, 6076 |
| SduI | GDGCHC | 7 cut(s) | 156, 451, 962, 969, 1744, 4223, 4443 |
| SfcI | CTRYAG | 4 cut(s) | 1345, 1905, 3426, 5329 |
| Sfr274I | CTCGAG | 1 cut(s) | 4127 |
| SfuI | TTCGAA | 1 cut(s) | 3303 |
| SlaI | CTCGAG | 1 cut(s) | 4127 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 756, 4973, 5852 |
| SmlI | CTYRAG | 7 cut(s) | 155, 831, 1776, 2176, 2963, 4127, 6131 |
| SmoI | CTYRAG | 7 cut(s) | 155, 831, 1776, 2176, 2963, 4127, 6131 |
| SpeI | ACTAGT | 1 cut(s) | 2608 |
| SphI | GCATGC | 2 cut(s) | 3579, 5368 |
| SseBI | AGGCCT | 2 cut(s) | 4281, 4561 |
| SspI | AATATT | 2 cut(s) | 5192, 5310 |
| SspMI | CTAG | 9 cut(s) | 1830, 2609, 2856, 3954, 4097, 5004, 5085, 5162, 6086 |
| SstI | GAGCTC | 2 cut(s) | 156, 962 |
| StuI | AGGCCT | 2 cut(s) | 4281, 4561 |
| TaqII | GACCGA | 2 cut(s) | 2802, 5160 |
| TatI | WGTACW | 4 cut(s) | 3621, 3637, 5481, 5832 |
| TauI | GCSGC | 7 cut(s) | 14, 127, 167, 561, 3953, 4241, 5015 |
| TseFI | GTSAC | 8 cut(s) | 133, 676, 996, 1956, 2776, 3178, 3361, 4804 |
| Tsp45I | GTSAC | 8 cut(s) | 133, 676, 996, 1956, 2776, 3178, 3361, 4804 |
| TspGWI | ACGGA | 7 cut(s) | 1376, 2110, 2688, 3486, 3561, 4007, 5503 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1799 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1670, 2842, 6003 |
| Vha464I | CTTAAG | 1 cut(s) | 6131 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 4268, 5467 |
| XbaI | TCTAGA | 1 cut(s) | 2855 |
| XceI | RCATGY | 4 cut(s) | 1216, 2207, 3579, 5368 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 1486, 3892, 4420, 4972 |
| XhoI | CTCGAG | 1 cut(s) | 4127 |
| XmaJI | CCTAGG | 2 cut(s) | 4096, 5161 |
| XmiI | GTMKAC | 5 cut(s) | 71, 2037, 2648, 3991, 4773 |
| XmnI | GAANNNNTTC | 3 cut(s) | 3086, 5960, 6125 |
| XspI | CTAG | 9 cut(s) | 1830, 2609, 2856, 3954, 4097, 5004, 5085, 5162, 6086 |
| Zsp2I | ATGCAT | 6 cut(s) | 433, 2074, 2205, 2415, 2583, 5725 |