RLG00000034965

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
57745452 .. 57752175
6724 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034965

Sequence Viewer

Length: 4242 bp
ATGGCGGCGGCATTGGCCGGAGAAGACTTAATGATGAGGCAGTCGAGCAGCCGGAGCAGCCGTAGCAGCTGGCGGTCGACGAGTGTCCGGGAAATGTGGAACGCGCCGGACGTGTTCCAGCGGAGCGGGCGGCAGCAGACGGTGGATGAGGAGGAGGAGCTCAAGTGGGCCGCCATCGAGCGGCTGCCGACTTATGATAGGATGAGGAGAGGCATGTTGAGGAATGTTATGAGCAATGGGAGGGTTGTAAATGAAGAAGTTGATGTTGCAAATCTTGGGGATCAAGATAAAAGGCAGTTGATGGAGAGCATACTCAAGGTTGTTGAGGAGGATAATGAGAGGTTCTTGCAGAGACTCAGAGCCAGAAATGACAGAGTTGGGATTGATATTCCTAGAGTTGAAGTTAGATACGAGAACATTTCCATAGAGGGAGATGCATTTGTAGGAACCAGAGCACTTCCAACGCTGTGGAATTCCACCTTAAACTCACTGGAGGCTTTAATTGGATTGGTTGGACTCTCACCGTCGAAGAAAAGAGTTGTCAAGATACTTCAAGATGTGAGCGGTATCGTGAAACCATCGAGGATGACACTACTTCTTGGACCTCCTGCATCCGGAAAAACAACACTGCTAAAAGCACTTGCTGGCAAACTTGATGAAGATCTGAGGGTAAATGGGAAAGTAACCTACTGTGGCCATGAATTTAAGGAATTTGTTCCTCAGAGGACCTCTGCTTACATTAGTCAGCATGATCTGCACTATGGTGAGATGACAGTTCGTGAAACATTGGACTTCTCCGGACGTTGCCTTGGAGTTGGAACCAGGTACGATATGCTGGTAGAGTTGTCTAGAAGGGAGAAAGATTCGGGTATCAAACCAGATGCTGAGATTGATGCATTCATGAAAGCCACATCCATGTCAGGCCAGGAAACTAGTTTGATCACAGATTACGTTCTCAAGATACTTGGGTTAGATATCTGTGCTGATATAATGGTGGGAGATGACATGAGGAGAGGAATATCTGGTGGACAGAAGAAACGTGTAACTACCGGAGAAATGTTGGTTGGACCAGCGAAAGCATTTTTCATGGACGAAATATCAACGGGGCTGGACAGTTCCACAACCTTCCAGATTGTCAAATTCATGAGGCAGATGGTTCATATTATGGATGTGACAATGGTCATCTCTCTCTTGCAGCCTGCACCTGAGACATATGACCTTTTCGATGACATTATCCTTCTTTCTGAGGGACAGATTGTCTACCAAGGCCCCCGTGATAATGTTCTTGAATTCTTTGAGTACATGGGATTCAAATGCCCAGACAGAAAAGGTGTTGCAGATTTTTTGCAAGAAGTGACCTCAAAGAAGGACCAAGAACAGTACTGGTTTAAGAAGAAACAACCTTACAGATATGTTTCAGTACCTGATTTTGCACGAGCTTTCACCTCTTTCCATGTTGGCCAACGGCTCGTTCAAGAACTAAGAGTTCCATATGACAAAAGAACTGCCCATCCGGCTGCCTTGGTGAAGGAAAAGTATGGAATATCCAATATGGAGCTCTTTAAGGCATGCTTTGCAAGGGAATGGCTGCTGATGAAGCGAAACTCTTTTGTGTACATCTTCAAGACTACTCAGATTACAATCATGGCTACCATTGCATTGACAGTATTCTTAAGAACCGAAATGAAAGCTGGGTCAGAAGCTGATTCAGCAAAATTTTGGGGGGCACTATTTTTCAGTCTCATCAATGTCATGTTTAATGGAATGGCGGAACTTGCAATGACAGTATTCAGGCTTCCTGTGTACTTTAAACAAAGGGATGCCTTGTTCTACCCTGGCTGGGCTTTTGGATTGCCTATTTGGCTAACCAGAATTCCAATTTCATTGATGGAATCTGCAATCTGGATCATCTTTACATACTACACCATTGGATTTGCACCTGCTGCCAGTCGGTTTTTCAAGCAGTTCTTGGCTTTCTTTGGTATACATCAGATGGCGCTTTCCCTTTTCCGTTTTATTGCAGCACTTGGAAGAACAGAGGTTGTTGCAAACACCATTGGTTCATTTACATTGCTAATGGTGTTCGTCCTTGGAGGTTTTATTGTTGCTAAAGATTGTTCAATATGTTTTGAAAATGCTCAAATATTTACATCTTGGTTCGGGAAGCTACTTCTCAAGCAAAGAGGCCTTTATACAGAAGAATATTGGTATTGGATTTGTATCGGAGCGCTTTTTGGCTTCTCTCTTCTCTTCAATGTTCTTTTCATCGCATCACTGACCTTCTTAAATCCTCTTGGGGATACTAAAACTCTAATTGAAACTGATGATTCGCAAAGCAATAAGAAGCGACGATCCAATCCAGAAGGTACTGATATGCAATTGAGAAATGGTCCAGCCAAAAAAGGAATGGTTTTGCCATTCCAGCCCTTGTCACTTGCTTTTAACCATGTGAACTACTACGTGGATATGCCTGCTGAAATGAAGACTCAAGGGGTTGAAGAGATCAGACTACAACTCCTACGTGATATTAGTGGTGCATTTAGGCCCGGTGTTTTGACTGCATTGGTTGGTGTCAGTGGTGCTGGAAAGACTACCCTAATGGATGTGTTAGCTGGAAGAAAGACAGGCGGGTACATTGAAGGAAGTATTACAATCTCTGGTTACCCAAAGAATCAAGCCACATTCGCTAGGGTCAGCGGTTACTGTGAACAAAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTCCTATACTCAGCCTGGCTGCGTCTTTCTAAAGATGTCAAGAAAGAAACACGGAAGATGTTTGTCGATGAGGTTATGGACTTGGTTGAGCTCAATCCTTTGAGGAATGCTTTAGTTGGACTTCCAGGAGTTGATGGGCTCTCAACTGAGCAAAGAAAGAGGCTCACCATTGCTGTGGAATTGGTTGCAAATCCTTCCATCATCTTTATGGATGAGCCAACCTCAGGTCTTGATGCTAGAGCAGCCGCAATTGTTATGCGTACTGTAAGAAACACAGTTGATACAGGACGAACCGTTGTTTGCACAATTCACCAACCTAGCATTGACATTTTTGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGACTTATGCTGGGCCTCTAGGTCGCCAATCTCACAAGCTTGTTGAATATTTTGAGGCTATTCCAGGGGTTCCCAAGATCAAAGAGGGTTACAATCCTGCTACATGGATGTTGGAGGTCAGCTCTGCTGCGGTTGAGACCCAACTAAACATTGACTTCGCAGAGATATATGCAAACTCAGAACTCTACAAGAGAAATCAGGACCTTATCAAGGAACTAAGCACACCTCAACCAGGAACCAAGGACCTTTACTTTCCCACCCGGTACTCCCAAACCTTTTTAACTCAGTGCAAGGCTTGCTTCTGGAAACAGCACTGGTCATACTGGAGGAACTCACGGTACAACGCCATTAGGTTTTTCATGACGGTTTGCATTGGCATATTATTCGGTGTTATCTTCTGGAGCAAAGGAGACCAAATAAACAAACAACAAGACCTGATCAATCTTTTGGGAGCTACCTATGCTGCTGTTCTTTTCCTCGGAGCTAGCAATGCCTCTGCCGTGCAATCTGTAGTGGCAGTTGAGCGAACAGTTTTCTACCGTGAAAGAGCTGCAGGAATGTACTCAGAGTTGCCTTATGCATTTGCTCAGGTGGCTATTGAGACGATTTACGTTGCAATCCAAACCTTTGTGTATTCCTGTCTTCTGTATTCTATGATCGGGTACAACTGGAAGGTGGAGAAATTTTTGTACTTCTACTACTTCATTTTCATGTGCTTTACCTACTTCTCAATGTACGGGATGATGGTGGTTGCCCTAACTCCTGGCCATCAAATTGCTGCAATTGTCATGTCATTCTTCATGAGCTTCTGGAACTTGTTCTCTGGTTTCCTCATCCCTAGACCGCTTATCCCCATCTGGTGGAGGTGGTATTACTGGGGTTCTCCAGTTGCTTGGACCATCTATGGCATCTTCGGATCTCAAGTTGGTGACTTGAAGACGGAGATCGACTTGCCTACCGGAGGAAAACAAGCAGTGAATGTTTTCCTCAAGGAGTATTTGGGTTATGACTATGACTTCCTCATTCCTGTAGTGGTTGCTCATGTTGGTTGGGTCCTCCTCTTCTTCTTCGTCTTTGCCTACGGTATCAAGTACCTTAACTTCCAAAGGAGATAA

Protein Analysis

1414

Amino Acids

160.7

Weight (kDa)

8.64

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 109 - 158 6.8e-07 ABC-transporter N-terminal
ABC_tran PF00005 184 - 365 1.1e-13 ABC transporter
ABC2_membrane PF01061 520 - 704 2.3e-35 ABC-2 type transporter
PDR_assoc PF08370 719 - 772 6.4e-22 Plant PDR ABC transporter associated
ABC_tran PF00005 840 - 992 5.5e-20 ABC transporter
ABC2_membrane PF01061 1137 - 1349 4.8e-55 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1948
Acc36I ACCTGC 1 cut(s) 1948
AccB7I CCANNNNNTGG 1 cut(s) 3987
AccBSI CCGCTC 3 cut(s) 126, 181, 564
AccI GTMKAC 3 cut(s) 77, 1260, 1984
AccII CGCG 1 cut(s) 104
AccIII TCCGGA 2 cut(s) 614, 797
AclWI GGATC 4 cut(s) 288, 1913, 2346, 4051
AcoI YGGCCR 4 cut(s) 15, 694, 1459, 3892
AcsI RAATTY 8 cut(s) 472, 701, 710, 1139, 1289, 1715, 1872, 3809
AfeI AGCGCT 1 cut(s) 2229
AfiI CCNNNNNNNGG 8 cut(s) 180, 614, 1840, 2975, 3337, 3359, 3987, 4088
AflII CTTAAG 1 cut(s) 1672
AflIII ACRYGT 2 cut(s) 111, 1039
AhdI GACNNNNNGTC 1 cut(s) 1256
AhlI ACTAGT 1 cut(s) 932
AjiI CACGTC 1 cut(s) 112
AjnI CCWGG 8 cut(s) 821, 924, 1834, 2765, 2875, 3190, 3358, 3889
AjuI GAANNNNNNNTTGG 4 cut(s) 1047, 1079, 1455, 1487
AleI CACNNNNGTG 1 cut(s) 762
AloI GAACNNNNNNTCC 4 cut(s) 1495, 1527, 1811, 1843
Alw21I GWGCWC 4 cut(s) 162, 457, 1560, 2844
Alw26I GTCTC 6 cut(s) 346, 1202, 1745, 3257, 3531, 3722
AlwI GGATC 4 cut(s) 288, 1913, 2346, 4051
AlwNI CAGNNNCTG 3 cut(s) 884, 1424, 1703
Aor13HI TCCGGA 2 cut(s) 614, 797
Aor51HI AGCGCT 1 cut(s) 2229
ApoI RAATTY 8 cut(s) 472, 701, 710, 1139, 1289, 1715, 1872, 3809
Asp700I GAANNNNTTC 3 cut(s) 714, 3944, 4109
AspLEI GCGC 3 cut(s) 106, 1999, 2230
AsuC2I CCSGG 3 cut(s) 89, 2547, 3388
AsuHPI GGTGA 8 cut(s) 513, 776, 1435, 1537, 2718, 2908, 3053, 4067
AsuNHI GCTAGC 1 cut(s) 3611
AvaII GGWCC 9 cut(s) 602, 726, 1067, 1369, 2390, 3328, 3370, 4023, 4180
AxyI CCTNAGG 1 cut(s) 2974
BaeGI GKGCMC 1 cut(s) 1729
BaeI ACNNNNGTAYC 2 cut(s) 953, 986
BalI TGGCCA 3 cut(s) 696, 1461, 3894
BanII GRGCYC 4 cut(s) 162, 1560, 2844, 2892
BarI GAAGNNNNNNTAC 3 cut(s) 1779, 1811, 4211
BauI CACGAG 1 cut(s) 1434
BbsI GAAGAC 4 cut(s) 30, 2489, 3761, 4070
Bbv12I GWGCWC 4 cut(s) 162, 457, 1560, 2844
BceAI ACGGC 3 cut(s) 45, 1481, 3611
BcgI CGANNNNNNTGC 2 cut(s) 3493, 3527
BciT130I CCWGG 8 cut(s) 823, 926, 1836, 2767, 2877, 3192, 3360, 3891
BciVI GTATCC 1 cut(s) 2293
BclI TGATCA 2 cut(s) 939, 3564
BcnI CCSGG 3 cut(s) 89, 2547, 3388
BcoDI GTCTC 6 cut(s) 346, 1202, 1745, 3257, 3531, 3722
BcuI ACTAGT 1 cut(s) 932
BfaI CTAG 9 cut(s) 393, 849, 933, 2688, 2988, 3069, 3146, 3612, 3966
BfmI CTRYAG 3 cut(s) 3636, 3678, 4155
BfoI RGCGCY 2 cut(s) 2000, 2231
BfrI CTTAAG 1 cut(s) 1672
BfuAI ACCTGC 1 cut(s) 1948
BfuI GTATCC 1 cut(s) 2293
BglI GCCNNNNNGGC 2 cut(s) 1514, 1861
BglII AGATCT 1 cut(s) 661
BmcAI AGTACT 1 cut(s) 1382
Bme18I GGWCC 9 cut(s) 602, 726, 1067, 1369, 2390, 3328, 3370, 4023, 4180
BmeRI GACNNNNNGTC 1 cut(s) 1256
BmgBI CACGTC 1 cut(s) 112
BmiI GGNNCC 6 cut(s) 448, 820, 1270, 3198, 3364, 4181
BmrI ACTGGG 1 cut(s) 4012
BmsI GCATC 8 cut(s) 424, 620, 871, 883, 1810, 2279, 2974, 4044
BmtI GCTAGC 1 cut(s) 3615
BmuI ACTGGG 1 cut(s) 4012
BoxI GACNNNNGTC 2 cut(s) 83, 1178
BpiI GAAGAC 4 cut(s) 30, 2489, 3761, 4070
BplI GAGNNNNNCTC 4 cut(s) 2957, 2989, 3233, 3265
BpmI CTGGAG 4 cut(s) 512, 3472, 3547, 3996
Bpu10I CCTNAGC 1 cut(s) 3714
BpuEI CTTGAG 7 cut(s) 146, 299, 941, 2159, 2472, 4032, 4100
BpuMI CCSGG 3 cut(s) 89, 2547, 3388
BsaAI YACGTR 2 cut(s) 2461, 2522
BsaBI GATNNNNATC 3 cut(s) 660, 1640, 2219
BsaI GGTCTC 2 cut(s) 3257, 3531
BsaJI CCNNGG 8 cut(s) 808, 1264, 1521, 1834, 2089, 3191, 3366, 3604
BsaWI WCCGGW 4 cut(s) 614, 797, 1049, 4085
BsaXI ACNNNNNCTCC 8 cut(s) 46, 76, 149, 179, 2499, 2529, 3111, 3141
Bsc4I CCNNNNNNNGG 8 cut(s) 180, 614, 1840, 2975, 3337, 3359, 3987, 4088
Bse1I ACTGG 8 cut(s) 495, 1388, 1947, 3446, 3455, 3800, 4007, 4013
Bse21I CCTNAGG 1 cut(s) 2974
Bse3DI GCAATG 6 cut(s) 241, 1653, 1785, 2069, 2919, 3622
Bse8I GATNNNNATC 3 cut(s) 660, 1640, 2219
BseAI TCCGGA 2 cut(s) 614, 797
BseBI CCWGG 8 cut(s) 823, 926, 1836, 2767, 2877, 3192, 3360, 3891
BseDI CCNNGG 8 cut(s) 808, 1264, 1521, 1834, 2089, 3191, 3366, 3604
BseJI GATNNNNATC 3 cut(s) 660, 1640, 2219
BseLI CCNNNNNNNGG 8 cut(s) 180, 614, 1840, 2975, 3337, 3359, 3987, 4088
BseMI GCAATG 6 cut(s) 241, 1653, 1785, 2069, 2919, 3622
BseNI ACTGG 8 cut(s) 495, 1388, 1947, 3446, 3455, 3800, 4007, 4013
BseRI GAGGAG 8 cut(s) 164, 167, 170, 220, 341, 1024, 3132, 4175
BseSI GKGCMC 1 cut(s) 1729
BseYI CCCAGC 3 cut(s) 1691, 1839, 3137
BsgI GTGCAG 2 cut(s) 740, 1185
Bsh1236I CGCG 1 cut(s) 104
Bsh1285I CGRYCG 1 cut(s) 77
BsiEI CGRYCG 1 cut(s) 77
BsiHKAI GWGCWC 4 cut(s) 162, 457, 1560, 2844
BslFI GGGAC 1 cut(s) 1263
BslI CCNNNNNNNGG 8 cut(s) 180, 614, 1840, 2975, 3337, 3359, 3987, 4088
BsmAI GTCTC 6 cut(s) 346, 1202, 1745, 3257, 3531, 3722
BsmBI CGTCTC 1 cut(s) 3722
BsmFI GGGAC 1 cut(s) 1263
BsmI GAATGC 2 cut(s) 896, 2863
Bso31I GGTCTC 2 cut(s) 3257, 3531
Bsp1286I GDGCHC 6 cut(s) 162, 457, 1560, 1729, 2844, 2892
Bsp13I TCCGGA 2 cut(s) 614, 797
Bsp1407I TGTACA 1 cut(s) 1614
BspEI TCCGGA 2 cut(s) 614, 797
BspFNI CGCG 1 cut(s) 104
BspHI TCATGA 4 cut(s) 900, 1143, 3486, 3927
BspLI GGNNCC 6 cut(s) 448, 820, 1270, 3198, 3364, 4181
BspMAI CTGCAG 1 cut(s) 3682
BspMI ACCTGC 1 cut(s) 1948
BspOI GCTAGC 1 cut(s) 3615
BspPI GGATC 4 cut(s) 288, 1913, 2346, 4051
BspTI CTTAAG 1 cut(s) 1672
BspTNI GGTCTC 2 cut(s) 3257, 3531
BsrBI CCGCTC 3 cut(s) 126, 181, 564
BsrDI GCAATG 6 cut(s) 241, 1653, 1785, 2069, 2919, 3622
BsrGI TGTACA 1 cut(s) 1614
BsrI ACTGG 8 cut(s) 495, 1388, 1947, 3446, 3455, 3800, 4007, 4013
BssECI CCNNGG 8 cut(s) 808, 1264, 1521, 1834, 2089, 3191, 3366, 3604
BssNAI GTATAC 1 cut(s) 1985
BssSI CACGAG 1 cut(s) 1434
BssT1I CCWWGG 5 cut(s) 808, 1264, 1521, 2089, 3366
Bst1107I GTATAC 1 cut(s) 1985
Bst2BI CACGAG 1 cut(s) 1434
Bst2UI CCWGG 8 cut(s) 823, 926, 1836, 2767, 2877, 3192, 3360, 3891
Bst6I CTCTTC 4 cut(s) 2250, 2255, 2493, 4193
BstAFI CTTAAG 1 cut(s) 1672
BstAPI GCANNNNNTGC 4 cut(s) 754, 1574, 1943, 3423
BstAUI TGTACA 1 cut(s) 1614
BstBAI YACGTR 2 cut(s) 2461, 2522
BstC8I GCNNGC 8 cut(s) 71, 128, 646, 1200, 1570, 2472, 3424, 3613
BstEII GGTNACC 1 cut(s) 2660
BstENI CCTNNNNNAGG 3 cut(s) 3335, 3357, 4086
BstFNI CGCG 1 cut(s) 104
BstH2I RGCGCY 2 cut(s) 2000, 2231
BstHHI GCGC 3 cut(s) 106, 1999, 2230
BstMAI GTCTC 6 cut(s) 346, 1202, 1745, 3257, 3531, 3722
BstMCI CGRYCG 1 cut(s) 77
BstNI CCWGG 8 cut(s) 823, 926, 1836, 2767, 2877, 3192, 3360, 3891
BstNSI RCATGY 2 cut(s) 217, 1572
BstPAI GACNNNNGTC 2 cut(s) 83, 1178
BstPI GGTNACC 1 cut(s) 2660
BstSFI CTRYAG 3 cut(s) 3636, 3678, 4155
BstSLI GKGCMC 1 cut(s) 1729
BstUI CGCG 1 cut(s) 104
BstV2I GAAGAC 4 cut(s) 30, 2489, 3761, 4070
BstX2I RGATCY 2 cut(s) 661, 4043
BstXI CCANNNNNNTGG 3 cut(s) 468, 2926, 4020
BstYI RGATCY 2 cut(s) 661, 4043
BstZ17I GTATAC 1 cut(s) 1985
Bsu36I CCTNAGG 1 cut(s) 2974
BsuI GTATCC 1 cut(s) 2293
BtgZI GCGATG 1 cut(s) 2251
BtrI CACGTC 1 cut(s) 112
BtsI GCAGTG 2 cut(s) 626, 4107
BtsIMutI CAGTG 7 cut(s) 488, 626, 2273, 2581, 3419, 3439, 4107
BveI ACCTGC 1 cut(s) 1948
Cac8I GCNNGC 8 cut(s) 71, 128, 646, 1200, 1570, 2472, 3424, 3613
CaiI CAGNNNCTG 3 cut(s) 884, 1424, 1703
CciI TCATGA 4 cut(s) 900, 1143, 3486, 3927
CfoI GCGC 3 cut(s) 106, 1999, 2230
CseI GACGC 1 cut(s) 2762
CsiI ACCWGGT 1 cut(s) 821
DraI TTTAAA 1 cut(s) 1810
DriI GACNNNNNGTC 1 cut(s) 1256
EaeI YGGCCR 4 cut(s) 15, 694, 1459, 3892
Eam1104I CTCTTC 4 cut(s) 2250, 2255, 2493, 4193
Eam1105I GACNNNNNGTC 1 cut(s) 1256
EarI CTCTTC 4 cut(s) 2250, 2255, 2493, 4193
EciI GGCGGA 1 cut(s) 1784
Ecl136II GAGCTC 3 cut(s) 160, 1558, 2842
Eco130I CCWWGG 5 cut(s) 808, 1264, 1521, 2089, 3366
Eco147I AGGCCT 1 cut(s) 2187
Eco24I GRGCYC 4 cut(s) 162, 1560, 2844, 2892
Eco31I GGTCTC 2 cut(s) 3257, 3531
Eco32I GATATC 1 cut(s) 976
Eco47I GGWCC 9 cut(s) 602, 726, 1067, 1369, 2390, 3328, 3370, 4023, 4180
Eco47III AGCGCT 1 cut(s) 2229
Eco53kI GAGCTC 3 cut(s) 160, 1558, 2842
Eco81I CCTNAGG 1 cut(s) 2974
Eco91I GGTNACC 1 cut(s) 2660
EcoICRI GAGCTC 3 cut(s) 160, 1558, 2842
EcoNI CCTNNNNNAGG 3 cut(s) 3335, 3357, 4086
EcoO109I RGGNCCY 5 cut(s) 726, 1268, 3328, 3370, 4180
EcoO65I GGTNACC 1 cut(s) 2660
EcoRI GAATTC 3 cut(s) 472, 1289, 1872
EcoRII CCWGG 8 cut(s) 821, 924, 1834, 2765, 2875, 3190, 3358, 3889
EcoRV GATATC 1 cut(s) 976
EcoT14I CCWWGG 5 cut(s) 808, 1264, 1521, 2089, 3366
EcoT22I ATGCAT 3 cut(s) 439, 898, 3709
EcoT38I GRGCYC 4 cut(s) 162, 1560, 2844, 2892
ErhI CCWWGG 5 cut(s) 808, 1264, 1521, 2089, 3366
Esp3I CGTCTC 1 cut(s) 3722
FalI AAGNNNNNCTT 6 cut(s) 1556, 1588, 1952, 1984, 3410, 3442
FaqI GGGAC 1 cut(s) 1263
FauI CCCGC 2 cut(s) 119, 2621
FauNDI CATATG 3 cut(s) 1213, 1492, 2731
FbaI TGATCA 2 cut(s) 939, 3564
FblI GTMKAC 3 cut(s) 77, 1260, 1984
FriOI GRGCYC 4 cut(s) 162, 1560, 2844, 2892
FspBI CTAG 9 cut(s) 393, 849, 933, 2688, 2988, 3069, 3146, 3612, 3966
GlaI GCGC 3 cut(s) 105, 1998, 2229
GsaI CCCAGC 3 cut(s) 1695, 1843, 3141
GsuI CTGGAG 4 cut(s) 512, 3472, 3547, 3996
HaeII RGCGCY 2 cut(s) 2000, 2231
HgaI GACGC 1 cut(s) 2762
HhaI GCGC 3 cut(s) 106, 1999, 2230
Hin6I GCGC 3 cut(s) 104, 1997, 2228
HinP1I GCGC 3 cut(s) 104, 1997, 2228
HincII GTYRAC 1 cut(s) 78
HindII GTYRAC 1 cut(s) 78
HindIII AAGCTT 2 cut(s) 3087, 3164
HphI GGTGA 8 cut(s) 513, 776, 1435, 1537, 2718, 2908, 3053, 4067
Hpy166II GTNNAC 8 cut(s) 78, 1028, 1261, 1615, 1804, 1985, 2452, 2708
Hpy8I GTNNAC 8 cut(s) 78, 1028, 1261, 1615, 1804, 1985, 2452, 2708
Hpy99I CGWCG 3 cut(s) 82, 529, 2352
HpyCH4IV ACGT 7 cut(s) 111, 802, 951, 1039, 2460, 2521, 3738
HpySE526I ACGT 7 cut(s) 111, 802, 951, 1039, 2460, 2521, 3738
HspAI GCGC 3 cut(s) 104, 1997, 2228
Kpn2I TCCGGA 2 cut(s) 614, 797
Ksp22I TGATCA 2 cut(s) 939, 3564
LmnI GCTCC 8 cut(s) 54, 123, 157, 1555, 2225, 3528, 3578, 3608
LweI GCATC 8 cut(s) 424, 620, 871, 883, 1810, 2279, 2974, 4044
MabI ACCWGGT 1 cut(s) 821
MaeI CTAG 9 cut(s) 393, 849, 933, 2688, 2988, 3069, 3146, 3612, 3966
MaeII ACGT 7 cut(s) 111, 802, 951, 1039, 2460, 2521, 3738
MbiI CCGCTC 3 cut(s) 126, 181, 564
MfeI CAATTG 3 cut(s) 2378, 3000, 3909
MflI RGATCY 2 cut(s) 661, 4043
MhlI GDGCHC 6 cut(s) 162, 457, 1560, 1729, 2844, 2892
MlsI TGGCCA 3 cut(s) 696, 1461, 3894
MluNI TGGCCA 3 cut(s) 696, 1461, 3894
MlyI GAGTC 3 cut(s) 348, 510, 2479
MmeI TCCRAC 6 cut(s) 485, 493, 796, 1045, 2848, 3219
Mox20I TGGCCA 3 cut(s) 696, 1461, 3894
Mph1103I ATGCAT 3 cut(s) 439, 898, 3709
MroI TCCGGA 2 cut(s) 614, 797
MroXI GAANNNNTTC 3 cut(s) 714, 3944, 4109
MscI TGGCCA 3 cut(s) 696, 1461, 3894
MslI CAYNNNNRTG 5 cut(s) 762, 914, 2924, 2957, 3836
Msp20I TGGCCA 3 cut(s) 696, 1461, 3894
MspA1I CMGCKG 3 cut(s) 69, 121, 2697
MspCI CTTAAG 1 cut(s) 1672
MunI CAATTG 3 cut(s) 2378, 3000, 3909
Mva1269I GAATGC 2 cut(s) 896, 2863
MvaI CCWGG 8 cut(s) 823, 926, 1836, 2767, 2877, 3192, 3360, 3891
MvnI CGCG 1 cut(s) 104
NciI CCSGG 3 cut(s) 89, 2547, 3388
NdeI CATATG 3 cut(s) 1213, 1492, 2731
NheI GCTAGC 1 cut(s) 3611
NlaIV GGNNCC 6 cut(s) 448, 820, 1270, 3198, 3364, 4181
NmuCI GTSAC 5 cut(s) 1171, 1354, 2430, 3127, 4055
NsiI ATGCAT 3 cut(s) 439, 898, 3709
NspI RCATGY 2 cut(s) 217, 1572
OliI CACNNNNGTG 1 cut(s) 762
PaeI GCATGC 1 cut(s) 1572
PagI TCATGA 4 cut(s) 900, 1143, 3486, 3927
PaqCI CACCTGC 1 cut(s) 1948
PceI AGGCCT 1 cut(s) 2187
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PctI GAATGC 2 cut(s) 896, 2863
PdmI GAANNNNTTC 3 cut(s) 714, 3944, 4109
PfeI GAWTC 7 cut(s) 863, 1308, 1706, 1892, 2327, 2671, 2747
PflMI CCANNNNNTGG 1 cut(s) 3987
PfoI TCCNGGA 2 cut(s) 87, 2875
PleI GAGTC 3 cut(s) 348, 510, 2479
PpsI GAGTC 3 cut(s) 348, 510, 2479
Ppu21I YACGTR 2 cut(s) 2461, 2522
PpuMI RGGWCCY 4 cut(s) 726, 3328, 3370, 4180
PshAI GACNNNNGTC 2 cut(s) 83, 1178
Psp124BI GAGCTC 3 cut(s) 162, 1560, 2844
Psp5II RGGWCCY 4 cut(s) 726, 3328, 3370, 4180
Psp6I CCWGG 8 cut(s) 821, 924, 1834, 2765, 2875, 3190, 3358, 3889
PspEI GGTNACC 1 cut(s) 2660
PspFI CCCAGC 3 cut(s) 1691, 1839, 3137
PspGI CCWGG 8 cut(s) 821, 924, 1834, 2765, 2875, 3190, 3358, 3889
PspN4I GGNNCC 6 cut(s) 448, 820, 1270, 3198, 3364, 4181
PspPPI RGGWCCY 4 cut(s) 726, 3328, 3370, 4180
PsrI GAACNNNNNNTAC 2 cut(s) 3449, 3481
PstI CTGCAG 1 cut(s) 3682
PstNI CAGNNNCTG 3 cut(s) 884, 1424, 1703
PsuI RGATCY 2 cut(s) 661, 4043
PvuII CAGCTG 1 cut(s) 69
RseI CAYNNNNRTG 5 cut(s) 762, 914, 2924, 2957, 3836
SacI GAGCTC 3 cut(s) 162, 1560, 2844
SalI GTCGAC 1 cut(s) 76
ScaI AGTACT 1 cut(s) 1382
SchI GAGTC 3 cut(s) 348, 510, 2479
SduI GDGCHC 6 cut(s) 162, 457, 1560, 1729, 2844, 2892
SexAI ACCWGGT 1 cut(s) 821
SfaNI GCATC 8 cut(s) 424, 620, 871, 883, 1810, 2279, 2974, 4044
SfcI CTRYAG 3 cut(s) 3636, 3678, 4155
SinI GGWCC 9 cut(s) 602, 726, 1067, 1369, 2390, 3328, 3370, 4023, 4180
SmiMI CAYNNNNRTG 5 cut(s) 762, 914, 2924, 2957, 3836
SmlI CTYRAG 8 cut(s) 161, 314, 956, 1672, 2174, 2487, 4047, 4115
SmoI CTYRAG 8 cut(s) 161, 314, 956, 1672, 2174, 2487, 4047, 4115
SpeI ACTAGT 1 cut(s) 932
SphI GCATGC 1 cut(s) 1572
SseBI AGGCCT 1 cut(s) 2187
SspI AATATT 3 cut(s) 2145, 2204, 3176
SspMI CTAG 9 cut(s) 393, 849, 933, 2688, 2988, 3069, 3146, 3612, 3966
SstI GAGCTC 3 cut(s) 162, 1560, 2844
StuI AGGCCT 1 cut(s) 2187
StyI CCWWGG 5 cut(s) 808, 1264, 1521, 2089, 3366
TaiI ACGT 7 cut(s) 114, 805, 954, 1042, 2463, 2524, 3741
TaqI TCGA 8 cut(s) 44, 77, 177, 527, 581, 1224, 2817, 4074
TatI WGTACW 6 cut(s) 1299, 1380, 1614, 1803, 3687, 3816
TauI GCSGC 6 cut(s) 8, 11, 133, 173, 184, 2999
TfiI GAWTC 7 cut(s) 863, 1308, 1706, 1892, 2327, 2671, 2747
TscAI CASTG 7 cut(s) 495, 633, 2280, 2581, 3419, 3446, 4107
TseFI GTSAC 5 cut(s) 1171, 1354, 2430, 3127, 4055
Tsp45I GTSAC 5 cut(s) 1171, 1354, 2430, 3127, 4055
TspGWI ACGGA 3 cut(s) 2000, 2818, 4082
TspRI CASTG 7 cut(s) 495, 633, 2280, 2581, 3419, 3446, 4107
Van91I CCANNNNNTGG 1 cut(s) 3987
Vha464I CTTAAG 1 cut(s) 1672
VpaK11BI GGWCC 9 cut(s) 602, 726, 1067, 1369, 2390, 3328, 3370, 4023, 4180
XagI CCTNNNNNAGG 3 cut(s) 3335, 3357, 4086
XapI RAATTY 8 cut(s) 472, 701, 710, 1139, 1289, 1715, 1872, 3809
XbaI TCTAGA 1 cut(s) 848
XceI RCATGY 2 cut(s) 217, 1572
XcmI CCANNNNNNNNNTGG 2 cut(s) 2404, 2956
XmiI GTMKAC 3 cut(s) 77, 1260, 1984
XmnI GAANNNNTTC 3 cut(s) 714, 3944, 4109
XspI CTAG 9 cut(s) 393, 849, 933, 2688, 2988, 3069, 3146, 3612, 3966
ZrmI AGTACT 1 cut(s) 1382
Zsp2I ATGCAT 3 cut(s) 439, 898, 3709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.