Rh5AG361300

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
60756490 .. 60763598
7109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG361300.1

Sequence Viewer

Length: 4365 bp
ATGGCGGCGGCAGCAATGGCCGGAGAAGACTTAATAAGGCAGTCGAGCAGCCGGAGGAGCTCGCTGTCGAGCAGCCGGAGGAGCTGGCGGTCGACTAGTGTCCGAGAAATGTGGAACGCGCCGGACGTGTTCCAACGGAGCGTCCGGCAGCCGGCGCTGGACGAGGAGGAGGAGCTCAAGTGGGCCGCCATAGAGCGGTTGCCGACTTATGATAGGATGAGGAGAGGCATGTTGAGGAATGTGATGAGCAATGGAAGGGTTGTGGCTGAAGAAGTTGACGTTGCGCATCTTGGGGATCAAGATAAGAAGCAGTTGATGGAGAGCATACTCAAGGTTATTGAGGAGGATAATGAAAAGTTCTTGAAGAAGCTCAGGGCCAGAAATGACAGGGTTGGCATCGATATTCCTAAAGTTGAGGTTAGATTCCAGAATTTATCAATAGATGGAGATGCGTTTGTAGGCACCAGAGCACTTCCAACTCTATGGAATTCCACCTTGAACACAATAGAGGGACTGCTGGGACTTGTTGGTCTTTCACCATCGAAGAAAAGAGTTGTTAAGATACTACAAGATGTTAGTGGTATTGTCAAACCAACAAGGATGACACTTCTTCTTGGACCTCCGGGATCAGGAAAAACAACATTGCTAAAAGCACTTTCTGGCAAACTAGATAGGGATCTTAGGGTAACTGGGAAGGTGACTTACTGCGGCCATGAATTTAACGAATTTGTACCTCAGAGAACCTCTGCTTATATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACCTTTGATTTCTCCGGACGTTGCCTAGGAGTTGGAACAAGGTATGATATACTAACAGAGTTGTCTAGACGGGAGAAAGATGCAGGTATCAAACCAGATCCTGCGATTGATGCATACATGAAAGCCACATCTGTGGCGGGCCAGGAAGCAAGTTTGATCACAGATTATGTCCTCAAGATACTTGGATTAGACATCTGTGCTGATATTATGGTGGGTGATGACATGAGAAGGGGAATATCCGGTGGACAAAAGAAGCGTGTCACGACTGGAGAAATGTTGGTTGGACCAGCAAAAGCATTTTTCATGGATGAAATATCAACGGGGTTGGACAGTTCCACAACCTTTCAGATTATCAAATACATGAGACAGATGGTTCACATTATGGATGTGTCAATGGTCATCTCTCTCTTGCAGCCTGCACCTGAGACGTACGATCTTTTTGATGATATTATCCTTCTTTCCGAGGGTCAGATTGTTTATCAAGGCCCACGTGAGAATGTCCTCGAGTTCTTTGAATATATGGGATTCAAATGCCCTGACAGAAAAGGTGTTGCAGACTTCTTGCAAGAAGTGACCTCAAGGAAGGACCAGGAACAATACTGGTGTAAGAAGAACCAACCTTACAGATTAGTCACAGTATCTGATTTTGCTCGGGCGTTCAGCTCCTTCCATGTTGGCCAACGGCTTGGGGAAGAACTAAGAGTTCCTTATGATAAAAGACATGCCCATCCTGCTGCTTTGGTCAAGGAAAAGTATGGAATATCCAATAAGGAGCTCTTCAAGGCATGCTTTGCAAGGGAATGGCTCCTAATGAAGCGGAACTCTTTTGTGTACATATTCAAAACTACACAGATTGCCATCATGGCTACAATTGCTTTGACCGTATTCTTAAGAACAGAAATGAAACCTGGGGATCTAAATGGTTCAGCAAAGTATTGGGGGGCAATGTTTTTCAGTCTCATTAACGTCATGTTTAATGGAGTGGCAGAGCTTGCAATGACAGTTTTCCGGCTTCCAGTGTTCTTTAAACAGAGGGATGCCTTGTTCTATCCAGCGTGGGCTTTTGCCTTGCCCATTTGGGTGACCAGAATTCCTGTTTCAGTGTTGGAATCTGTGATATGGATCATTTTTACCTATTACACCATAGGATTTGCACCTGATCCTAGTAGGTTCTTCAAACAGTTATTGGCTTTCATTGGTATAAGTCAGATGGCACTCTCCCTCTTCCGTTTCATTGCAGCGCTTGGAAGATCAGATGTGGTTGCTAACACAATTGGTTCATTTACACTGCTATTGGTATTTATCCTAGGAGGTTATATTGTTGCTAAAGATGACATCCAGTCATGGATGATTTGGGGCTACTATGTCTCACCTATGATGTATGGACAAAATGCAATTGCTATTAATGAATTTCTTGATAAAAGATGGGGCGGCGCTCCCCCAAACTCCTCCACTCAGCCTACTCTCGGAAAAGCCCTTCTCAGAGAAAGAGGCCTGTACACTGAAGAATATTGGTATTGGATTTGCGTTGGAGCGCTTTTTGGGTTTTCTTTTATATTCAATGGGCTGTTCATTGCAGCACTCACCTACTTGAACCCCCTCGGCGACAACAAAGGTCTAATTGTGGAGGATGATTCTGAAACCAAGAGGAGGCCACAATTGACAGAAGGTATTGATATGCAAGTGAGAACTGCAGAAGGAACTTCAAATGGACAAGCCAAGCGAGGAATGGTGTTGCCCTTCCAGCCCCTTTCACTCGCTTTCAGCCATGTGAACTACTATGTGGATATGCCTGCGGAGATGAAGACCCAAGGTATTGAAGAGAACCGACTGCAACTACTAAGAGATGTTAATGGGGCATTCAGGCCAGGAGTTCTCACTGCATTAGTTGGTGTTAGCGGTGCTGGAAAAACTACTTTGATGGATGTCTTGGCTGGAAGAAAGACTGGTGGATATATAGAAGGAAGTATTAGTATCTCAGGTTATCCAAAAAACCAAACCACATTTGCTCGGGTTAGCGGTTATTGTGAACAGAACGACATTCATTCACCATATGTTACTGTTTATGAATCTCTGCTATACTCTGCCTGGCTACGTCTTTCTAAGGATGTTGACAAAAGCAAACGAAAGATGTTTGTTGATGAAGTTATGGACTTGGTGGAGCTTAACCCCTTGAGGAATGCTTTAGTTGGACTTCCAGGAGTTGATGGACTTTCAACTGAACAAAGAAAGAGGCTGACCATTGCTGTAGAATTGGTTGCGAATCCTTCCATTATCTTTATGGATGAGCCAACATCAGGGCTTGATGCTAGAGCAGCTGCCATTGTTATGCGTACTGTAAGAAACACCGTCGATACTGGACGAACTGTTGTCTGCACCATTCACCAACCTAGCATTGACATTTTCGAAGCTTTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAAGTGATTTATGCTGGACCTCTTGGTGATCGGTCTCACAAACTTGTTGAATATTTTGAGGCCATTCCAGGAGTTCCCAAGATAAAAGACGGCTACAACCCTGCTACATGGATGTTAGAGGTCAGCTCTGCTGCAGTTGAGGCTCAAAATAACGTTGATTTTGCCGAAATATATGCGAACTCTGAGCTGTATAGGAGCGTTCAAGAACTTATCAAGGAATTGAGCGCACCACTCCCAGGCTCCAAGGACCTCTACTTCCCCACCCAATACTCGCAAAGCTTCCCAACTCAATGCAAGGCTTGCTTTTGGAAACAACACTGGTCATACTGGAGGAATTCGCAGTACAATGCCATCAGGTTTTTCAACACAATAATGATCGGCGTACTCTTTGGTATCATCTTCTGGAAGAAAGGAAACGTGTTAGACAAACAACAAGATATTATTAACCTTCTGGGAGCAACCTATTCTGCTGTTCTGTTCCTTGGAGCGGGAAATGCTTCTGCTGTGCAATCTGTGGTTGCGATTGAGAGAACAGTTTTCTACCGAGAAAGAGCAGCAGGAATGTATTCAGAGTTGCCTTATGCATTTGCTCAGGTGGCCATTGAGACGATTTATGTTGCTATACAAACATTCATTTATTCCCTTCTTCTATTTACCATGATCGGCTATGAATTTAAAGTTGAGAAATTTTTGTATTTCTACTACTTTATATTCATGTGTTTTACATACATGTCAATGTATGGAATGATGGTGGTTGCCCTAACTCCCGGCCATCAAATCGCTGCAATTGTCATGTCCTTCTTCATGAGTTTCTGGAATTTGTTCTCCGGTTTCCTCCTCGCTAGACCGCTACTCCCGATATGGTGGAGGTGGTACTACTGGGGTTCTCCAATTGCTTGGACAATTTACGGTGTCCAATCATCTCAATTCGGTGACCGGAAGGATACGAATGTCTCACTTTCTGATGGAAGCACAGTAAGATTAGATCTATTCCTCAAGAAGAATTGGGGTTATGACCACGACTTCCTCATACCAGTTGTCGTTGCTCATGTTGGTTGGGTCCTCCTCTTCTTCTTTGTCTTTGCTTATGGTATCAAGTACCTTAACTTCCAGAGGAGATGA

Protein Analysis

1454

Amino Acids

164.63

Weight (kDa)

8.63

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_trans_N PF14510 115 - 163 9.6e-09 ABC-transporter N-terminal
ABC_tran PF00005 189 - 370 8.6e-15 ABC transporter
ABC2_membrane_7 PF19055 404 - 455 9.9e-06 ABC-2 type transporter
ABC2_membrane PF01061 525 - 737 2.1e-46 ABC-2 type transporter
PDR_assoc PF08370 747 - 806 2.3e-25 Plant PDR ABC transporter associated
ABC_tran PF00005 880 - 1032 6.1e-20 ABC transporter
ABC2_membrane PF01061 1177 - 1391 3.5e-53 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 528
Acc16I TGCGCA 1 cut(s) 285
Acc36I ACCTGC 1 cut(s) 872
AccB1I GGYRCC 1 cut(s) 461
AccBSI CCGCTC 2 cut(s) 196, 3731
AccI GTMKAC 1 cut(s) 92
AccII CGCG 1 cut(s) 119
AccIII TCCGGA 1 cut(s) 812
AclI AACGTT 1 cut(s) 3396
AclWI GGATC 7 cut(s) 303, 634, 684, 890, 1719, 1928, 1952
AcoI YGGCCR 5 cut(s) 18, 709, 1474, 3840, 4012
AcuI CTGAAG 2 cut(s) 288, 2322
AcvI CACGTG 1 cut(s) 1289
AfaI GTAC 9 cut(s) 732, 1229, 1631, 2297, 3133, 3587, 3627, 4118, 4343
AfeI AGCGCT 2 cut(s) 2040, 2334
AfiI CCNNNNNNNGG 8 cut(s) 151, 195, 629, 2264, 2448, 3095, 3479, 3730
AflII CTTAAG 1 cut(s) 1687
AflIII ACRYGT 3 cut(s) 126, 3660, 3972
AhdI GACNNNNNGTC 1 cut(s) 2137
AhlI ACTAGT 1 cut(s) 95
AjiI CACGTC 1 cut(s) 127
AjnI CCWGG 8 cut(s) 939, 1386, 1705, 2665, 2885, 2995, 3310, 3478
AjuI GAANNNNNNNTTGG 2 cut(s) 1062, 1094
AleI CACNNNNGTG 1 cut(s) 929
AloI GAACNNNNNNTCC 2 cut(s) 1826, 1858
Alw21I GWGCWC 4 cut(s) 62, 177, 472, 1575
Alw26I GTCTC 7 cut(s) 1156, 1217, 1760, 2170, 3282, 3842, 4201
AlwI GGATC 7 cut(s) 303, 634, 684, 890, 1719, 1928, 1952
AlwNI CAGNNNCTG 2 cut(s) 899, 1439
Ama87I CYCGRG 3 cut(s) 1301, 1449, 2808
Aor13HI TCCGGA 1 cut(s) 812
Aor51HI AGCGCT 2 cut(s) 2040, 2334
AseI ATTAAT 1 cut(s) 2202
Asp700I GAANNNNTTC 3 cut(s) 3739, 3808, 4064
AspA2I CCTAGG 2 cut(s) 823, 2104
AspLEI GCGC 7 cut(s) 121, 157, 286, 2041, 2234, 2335, 3470
AsuC2I CCSGG 2 cut(s) 624, 4011
AsuII TTCGAA 1 cut(s) 3204
AvaI CYCGRG 3 cut(s) 1301, 1449, 2808
AvaII GGWCC 6 cut(s) 617, 1082, 1384, 3260, 3490, 4303
AvrII CCTAGG 2 cut(s) 823, 2104
BaeI ACNNNNGTAYC 2 cut(s) 4179, 4212
BalI TGGCCA 2 cut(s) 1476, 3842
BanI GGYRCC 1 cut(s) 461
BanII GRGCYC 3 cut(s) 62, 177, 1575
BarI GAAGNNNNNNTAC 3 cut(s) 686, 718, 4334
BbrPI CACGTG 1 cut(s) 1289
BbsI GAAGAC 2 cut(s) 33, 2609
Bbv12I GWGCWC 4 cut(s) 62, 177, 472, 1575
BceAI ACGGC 2 cut(s) 1496, 3349
BcgI CGANNNNNNTGC 2 cut(s) 3398, 3432
BciT130I CCWGG 8 cut(s) 941, 1388, 1707, 2667, 2887, 2997, 3312, 3480
BciVI GTATCC 1 cut(s) 4180
BclI TGATCA 1 cut(s) 954
BcnI CCSGG 2 cut(s) 624, 4011
BcoDI GTCTC 7 cut(s) 1156, 1217, 1760, 2170, 3282, 3842, 4201
BcuI ACTAGT 1 cut(s) 95
BfaI CTAG 9 cut(s) 96, 668, 824, 864, 1962, 2105, 3108, 3189, 4086
BfmI CTRYAG 3 cut(s) 2490, 3045, 3375
BfoI RGCGCY 4 cut(s) 158, 2042, 2235, 2336
BfrI CTTAAG 1 cut(s) 1687
BfuAI ACCTGC 1 cut(s) 872
BfuI GTATCC 1 cut(s) 4180
BglI GCCNNNNNGGC 1 cut(s) 1661
BglII AGATCT 1 cut(s) 4228
BlnI CCTAGG 2 cut(s) 823, 2104
Bme18I GGWCC 6 cut(s) 617, 1082, 1384, 3260, 3490, 4303
BmeRI GACNNNNNGTC 1 cut(s) 2137
BmeT110I CYCGRG 3 cut(s) 1301, 1449, 2808
BmgBI CACGTC 1 cut(s) 127
BmiI GGNNCC 4 cut(s) 463, 1604, 3484, 4304
BmrI ACTGGG 2 cut(s) 699, 4132
BmsI GCATC 7 cut(s) 295, 405, 439, 868, 898, 1825, 3094
BmuI ACTGGG 2 cut(s) 699, 4132
BoxI GACNNNNGTC 1 cut(s) 98
BpiI GAAGAC 2 cut(s) 33, 2609
BplI GAGNNNNNCTC 2 cut(s) 3353, 3385
BpmI CTGGAG 2 cut(s) 1086, 3592
Bpu10I CCTNAGC 2 cut(s) 371, 3834
Bpu14I TTCGAA 1 cut(s) 3204
BpuEI CTTGAG 6 cut(s) 161, 314, 956, 1360, 2992, 4223
BpuMI CCSGG 2 cut(s) 624, 4011
Bsa29I ATCGAT 1 cut(s) 399
BsaAI YACGTR 1 cut(s) 1289
BsaBI GATNNNNATC 3 cut(s) 675, 1655, 1919
BsaI GGTCTC 1 cut(s) 3282
BsaJI CCNNGG 9 cut(s) 823, 1260, 1706, 2104, 2398, 2608, 3478, 3486, 3724
BsaWI WCCGGW 4 cut(s) 812, 1037, 4070, 4179
BsaXI ACNNNNNCTCC 6 cut(s) 164, 194, 3231, 3261, 4080, 4110
Bsc4I CCNNNNNNNGG 8 cut(s) 151, 195, 629, 2264, 2448, 3095, 3479, 3730
Bse118I RCCGGY 1 cut(s) 151
Bse3DI GCAATG 8 cut(s) 21, 256, 641, 1749, 1800, 2031, 2370, 3039
Bse8I GATNNNNATC 3 cut(s) 675, 1655, 1919
BseAI TCCGGA 1 cut(s) 812
BseBI CCWGG 8 cut(s) 941, 1388, 1707, 2667, 2887, 2997, 3312, 3480
BseCI ATCGAT 1 cut(s) 399
BseDI CCNNGG 9 cut(s) 823, 1260, 1706, 2104, 2398, 2608, 3478, 3486, 3724
BseJI GATNNNNATC 3 cut(s) 675, 1655, 1919
BseLI CCNNNNNNNGG 8 cut(s) 151, 195, 629, 2264, 2448, 3095, 3479, 3730
BseMI GCAATG 8 cut(s) 21, 256, 641, 1749, 1800, 2031, 2370, 3039
BseMII CTCAG 8 cut(s) 385, 749, 1212, 2267, 2293, 2790, 3417, 3848
BseYI CCCAGC 1 cut(s) 517
BsgI GTGCAG 2 cut(s) 1200, 3157
Bsh1236I CGCG 1 cut(s) 119
Bsh1285I CGRYCG 1 cut(s) 92
BshNI GGYRCC 1 cut(s) 461
BshVI ATCGAT 1 cut(s) 399
BsiEI CGRYCG 1 cut(s) 92
BsiHKAI GWGCWC 4 cut(s) 62, 177, 472, 1575
BsiHKCI CYCGRG 3 cut(s) 1301, 1449, 2808
BsiWI CGTACG 1 cut(s) 1227
BslFI GGGAC 2 cut(s) 525, 534
BslI CCNNNNNNNGG 8 cut(s) 151, 195, 629, 2264, 2448, 3095, 3479, 3730
BsmAI GTCTC 7 cut(s) 1156, 1217, 1760, 2170, 3282, 3842, 4201
BsmBI CGTCTC 2 cut(s) 1217, 3842
BsmFI GGGAC 2 cut(s) 525, 534
BsmI GAATGC 2 cut(s) 2657, 2983
Bso31I GGTCTC 1 cut(s) 3282
BsoBI CYCGRG 3 cut(s) 1301, 1449, 2808
Bsp119I TTCGAA 1 cut(s) 3204
Bsp1286I GDGCHC 4 cut(s) 62, 177, 472, 1575
Bsp13I TCCGGA 1 cut(s) 812
Bsp1407I TGTACA 2 cut(s) 1629, 2295
BspCNI CTCAG 8 cut(s) 384, 748, 1213, 2266, 2292, 2789, 3418, 3847
BspDI ATCGAT 1 cut(s) 399
BspEI TCCGGA 1 cut(s) 812
BspFNI CGCG 1 cut(s) 119
BspHI TCATGA 1 cut(s) 4047
BspLI GGNNCC 4 cut(s) 463, 1604, 3484, 4304
BspMAI CTGCAG 2 cut(s) 2494, 3379
BspMI ACCTGC 1 cut(s) 872
BspPI GGATC 7 cut(s) 303, 634, 684, 890, 1719, 1928, 1952
BspQI GCTCTTC 1 cut(s) 1580
BspT104I TTCGAA 1 cut(s) 3204
BspT107I GGYRCC 1 cut(s) 461
BspTI CTTAAG 1 cut(s) 1687
BspTNI GGTCTC 1 cut(s) 3282
BsrBI CCGCTC 2 cut(s) 196, 3731
BsrDI GCAATG 8 cut(s) 21, 256, 641, 1749, 1800, 2031, 2370, 3039
BsrFI RCCGGY 1 cut(s) 151
BsrGI TGTACA 2 cut(s) 1629, 2295
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 9 cut(s) 823, 1260, 1706, 2104, 2398, 2608, 3478, 3486, 3724
BssT1I CCWWGG 5 cut(s) 823, 2104, 2608, 3486, 3724
Bst2UI CCWGG 8 cut(s) 941, 1388, 1707, 2667, 2887, 2997, 3312, 3480
Bst6I CTCTTC 4 cut(s) 1580, 2027, 2613, 4316
BstAFI CTTAAG 1 cut(s) 1687
BstAPI GCANNNNNTGC 3 cut(s) 1589, 1790, 3543
BstAUI TGTACA 2 cut(s) 1629, 2295
BstBAI YACGTR 1 cut(s) 1289
BstBI TTCGAA 1 cut(s) 3204
BstEII GGTNACC 2 cut(s) 1879, 4175
BstFNI CGCG 1 cut(s) 119
BstH2I RGCGCY 4 cut(s) 158, 2042, 2235, 2336
BstHHI GCGC 7 cut(s) 121, 157, 286, 2041, 2234, 2335, 3470
BstMAI GTCTC 7 cut(s) 1156, 1217, 1760, 2170, 3282, 3842, 4201
BstMCI CGRYCG 1 cut(s) 92
BstNI CCWGG 8 cut(s) 941, 1388, 1707, 2667, 2887, 2997, 3312, 3480
BstNSI RCATGY 4 cut(s) 232, 1523, 1587, 3976
BstPAI GACNNNNGTC 1 cut(s) 98
BstPI GGTNACC 2 cut(s) 1879, 4175
BstSFI CTRYAG 3 cut(s) 2490, 3045, 3375
BstUI CGCG 1 cut(s) 119
BstV2I GAAGAC 2 cut(s) 33, 2609
BstX2I RGATCY 4 cut(s) 676, 895, 1711, 4228
BstXI CCANNNNNNTGG 4 cut(s) 483, 931, 1484, 4140
BstYI RGATCY 4 cut(s) 676, 895, 1711, 4228
Bsu15I ATCGAT 1 cut(s) 399
BsuI GTATCC 1 cut(s) 4180
BsuTUI ATCGAT 1 cut(s) 399
BtrI CACGTC 1 cut(s) 127
BtsI GCAGTG 2 cut(s) 2084, 2676
BtsIMutI CAGTG 6 cut(s) 1821, 1905, 2084, 2298, 2676, 3559
BveI ACCTGC 1 cut(s) 872
CaiI CAGNNNCTG 2 cut(s) 899, 1439
CciI TCATGA 1 cut(s) 4047
CfoI GCGC 7 cut(s) 121, 157, 286, 2041, 2234, 2335, 3470
Cfr10I RCCGGY 1 cut(s) 151
ClaI ATCGAT 1 cut(s) 399
CseI GACGC 1 cut(s) 130
Csp6I GTAC 9 cut(s) 731, 1228, 1630, 2296, 3132, 3586, 3626, 4117, 4342
CviQI GTAC 9 cut(s) 731, 1228, 1630, 2296, 3132, 3586, 3626, 4117, 4342
DraI TTTAAA 2 cut(s) 1825, 3919
DrdI GACNNNNNNGTC 1 cut(s) 528
DriI GACNNNNNGTC 1 cut(s) 2137
DseDI GACNNNNNNGTC 1 cut(s) 528
EaeI YGGCCR 5 cut(s) 18, 709, 1474, 3840, 4012
Eam1104I CTCTTC 4 cut(s) 1580, 2027, 2613, 4316
Eam1105I GACNNNNNGTC 1 cut(s) 2137
EarI CTCTTC 4 cut(s) 1580, 2027, 2613, 4316
Ecl136II GAGCTC 3 cut(s) 60, 175, 1573
Eco130I CCWWGG 5 cut(s) 823, 2104, 2608, 3486, 3724
Eco147I AGGCCT 1 cut(s) 2292
Eco24I GRGCYC 3 cut(s) 62, 177, 1575
Eco31I GGTCTC 1 cut(s) 3282
Eco47I GGWCC 6 cut(s) 617, 1082, 1384, 3260, 3490, 4303
Eco47III AGCGCT 2 cut(s) 2040, 2334
Eco53kI GAGCTC 3 cut(s) 60, 175, 1573
Eco57I CTGAAG 2 cut(s) 288, 2322
Eco72I CACGTG 1 cut(s) 1289
Eco88I CYCGRG 3 cut(s) 1301, 1449, 2808
Eco91I GGTNACC 2 cut(s) 1879, 4175
EcoICRI GAGCTC 3 cut(s) 60, 175, 1573
EcoO109I RGGNCCY 2 cut(s) 3490, 4303
EcoO65I GGTNACC 2 cut(s) 1879, 4175
EcoRI GAATTC 3 cut(s) 487, 1887, 3577
EcoRII CCWGG 8 cut(s) 939, 1386, 1705, 2665, 2885, 2995, 3310, 3478
EcoT14I CCWWGG 5 cut(s) 823, 2104, 2608, 3486, 3724
EcoT22I ATGCAT 2 cut(s) 913, 3829
EcoT38I GRGCYC 3 cut(s) 62, 177, 1575
ErhI CCWWGG 5 cut(s) 823, 2104, 2608, 3486, 3724
Esp3I CGTCTC 2 cut(s) 1217, 3842
FalI AAGNNNNNCTT 8 cut(s) 1489, 1521, 1559, 1591, 1571, 1603, 3530, 3562
FaqI GGGAC 2 cut(s) 525, 534
FauI CCCGC 2 cut(s) 928, 3724
FauNDI CATATG 1 cut(s) 2851
FbaI TGATCA 1 cut(s) 954
FblI GTMKAC 1 cut(s) 92
FriOI GRGCYC 3 cut(s) 62, 177, 1575
FspBI CTAG 9 cut(s) 96, 668, 824, 864, 1962, 2105, 3108, 3189, 4086
FspI TGCGCA 1 cut(s) 285
GlaI GCGC 7 cut(s) 120, 156, 285, 2040, 2233, 2334, 3469
GsaI CCCAGC 1 cut(s) 521
GsuI CTGGAG 2 cut(s) 1086, 3592
HaeII RGCGCY 4 cut(s) 158, 2042, 2235, 2336
HgaI GACGC 1 cut(s) 130
HhaI GCGC 7 cut(s) 121, 157, 286, 2041, 2234, 2335, 3470
Hin6I GCGC 7 cut(s) 119, 155, 284, 2039, 2232, 2333, 3468
HinP1I GCGC 7 cut(s) 119, 155, 284, 2039, 2232, 2333, 3468
HincII GTYRAC 3 cut(s) 93, 277, 2911
HindII GTYRAC 3 cut(s) 93, 277, 2911
HindIII AAGCTT 2 cut(s) 3207, 3520
HinfI GANTC 6 cut(s) 423, 1323, 1907, 2432, 2867, 3061
Hpy166II GTNNAC 9 cut(s) 93, 277, 1043, 1174, 1630, 2298, 2572, 2828, 2911
Hpy8I GTNNAC 9 cut(s) 93, 277, 1043, 1174, 1630, 2298, 2572, 2828, 2911
Hpy99I CGWCG 1 cut(s) 3152
HpyCH4IV ACGT 9 cut(s) 126, 279, 817, 1226, 1288, 1764, 2893, 3396, 3660
HpySE526I ACGT 9 cut(s) 126, 279, 817, 1226, 1288, 1764, 2893, 3396, 3660
HspAI GCGC 7 cut(s) 119, 155, 284, 2039, 2232, 2333, 3468
Kpn2I TCCGGA 1 cut(s) 812
KroI GCCGGC 1 cut(s) 151
KroNI GCCGGC 1 cut(s) 153
Ksp22I TGATCA 1 cut(s) 954
LguI GCTCTTC 1 cut(s) 1580
LweI GCATC 7 cut(s) 295, 405, 439, 868, 898, 1825, 3094
MaeI CTAG 9 cut(s) 96, 668, 824, 864, 1962, 2105, 3108, 3189, 4086
MaeII ACGT 9 cut(s) 126, 279, 817, 1226, 1288, 1764, 2893, 3396, 3660
MaeIII GTNAC 8 cut(s) 685, 697, 1057, 1369, 1429, 1879, 2854, 4175
MbiI CCGCTC 2 cut(s) 196, 3731
MfeI CAATTG 6 cut(s) 1668, 2070, 2193, 2456, 4029, 4134
MflI RGATCY 4 cut(s) 676, 895, 1711, 4228
MhlI GDGCHC 4 cut(s) 62, 177, 472, 1575
MlsI TGGCCA 2 cut(s) 1476, 3842
MluNI TGGCCA 2 cut(s) 1476, 3842
MmeI TCCRAC 8 cut(s) 157, 500, 811, 1060, 1104, 1884, 2308, 2968
Mox20I TGGCCA 2 cut(s) 1476, 3842
Mph1103I ATGCAT 2 cut(s) 913, 3829
MroI TCCGGA 1 cut(s) 812
MroNI GCCGGC 1 cut(s) 151
MroXI GAANNNNTTC 3 cut(s) 3739, 3808, 4064
MscI TGGCCA 2 cut(s) 1476, 3842
MslI CAYNNNNRTG 6 cut(s) 777, 929, 1877, 3125, 3614, 3977
Msp20I TGGCCA 2 cut(s) 1476, 3842
MspA1I CMGCKG 1 cut(s) 3116
MspCI CTTAAG 1 cut(s) 1687
MunI CAATTG 6 cut(s) 1668, 2070, 2193, 2456, 4029, 4134
Mva1269I GAATGC 2 cut(s) 2657, 2983
MvaI CCWGG 8 cut(s) 941, 1388, 1707, 2667, 2887, 2997, 3312, 3480
MvnI CGCG 1 cut(s) 119
NaeI GCCGGC 1 cut(s) 153
NciI CCSGG 2 cut(s) 624, 4011
NdeI CATATG 1 cut(s) 2851
NgoMIV GCCGGC 1 cut(s) 151
NlaIV GGNNCC 4 cut(s) 463, 1604, 3484, 4304
NmeAIII GCCGAG 1 cut(s) 2379
NmuCI GTSAC 6 cut(s) 697, 1057, 1369, 1429, 1879, 4175
NsbI TGCGCA 1 cut(s) 285
NsiI ATGCAT 2 cut(s) 913, 3829
NspI RCATGY 4 cut(s) 232, 1523, 1587, 3976
NspV TTCGAA 1 cut(s) 3204
OliI CACNNNNGTG 1 cut(s) 929
PaeI GCATGC 1 cut(s) 1587
PaeR7I CTCGAG 1 cut(s) 1301
PagI TCATGA 1 cut(s) 4047
PceI AGGCCT 1 cut(s) 2292
PciI ACATGT 1 cut(s) 3972
PciSI GCTCTTC 1 cut(s) 1580
PcsI WCGNNNNNNNCGW 1 cut(s) 123
PctI GAATGC 2 cut(s) 2657, 2983
PdiI GCCGGC 1 cut(s) 153
PdmI GAANNNNTTC 3 cut(s) 3739, 3808, 4064
PfeI GAWTC 6 cut(s) 423, 1323, 1907, 2432, 2867, 3061
Pfl23II CGTACG 1 cut(s) 1227
PfoI TCCNGGA 3 cut(s) 622, 2995, 3310
PmaCI CACGTG 1 cut(s) 1289
PmlI CACGTG 1 cut(s) 1289
Ppu21I YACGTR 1 cut(s) 1289
PpuMI RGGWCCY 2 cut(s) 3490, 4303
PscI ACATGT 1 cut(s) 3972
PshAI GACNNNNGTC 1 cut(s) 98
PshBI ATTAAT 1 cut(s) 2202
Psp124BI GAGCTC 3 cut(s) 62, 177, 1575
Psp1406I AACGTT 1 cut(s) 3396
Psp5II RGGWCCY 2 cut(s) 3490, 4303
Psp6I CCWGG 8 cut(s) 939, 1386, 1705, 2665, 2885, 2995, 3310, 3478
PspCI CACGTG 1 cut(s) 1289
PspEI GGTNACC 2 cut(s) 1879, 4175
PspFI CCCAGC 1 cut(s) 517
PspGI CCWGG 8 cut(s) 939, 1386, 1705, 2665, 2885, 2995, 3310, 3478
PspLI CGTACG 1 cut(s) 1227
PspN4I GGNNCC 4 cut(s) 463, 1604, 3484, 4304
PspPPI RGGWCCY 2 cut(s) 3490, 4303
PspXI VCTCGAGB 1 cut(s) 1301
PsrI GAACNNNNNNTAC 2 cut(s) 1403, 1435
PstI CTGCAG 2 cut(s) 2494, 3379
PstNI CAGNNNCTG 2 cut(s) 899, 1439
PsuI RGATCY 4 cut(s) 676, 895, 1711, 4228
PvuII CAGCTG 1 cut(s) 3116
RsaI GTAC 9 cut(s) 732, 1229, 1631, 2297, 3133, 3587, 3627, 4118, 4343
RsaNI GTAC 9 cut(s) 731, 1228, 1630, 2296, 3132, 3586, 3626, 4117, 4342
RseI CAYNNNNRTG 6 cut(s) 777, 929, 1877, 3125, 3614, 3977
SacI GAGCTC 3 cut(s) 62, 177, 1575
SalI GTCGAC 1 cut(s) 91
SapI GCTCTTC 1 cut(s) 1580
SduI GDGCHC 4 cut(s) 62, 177, 472, 1575
SfaNI GCATC 7 cut(s) 295, 405, 439, 868, 898, 1825, 3094
SfcI CTRYAG 3 cut(s) 2490, 3045, 3375
Sfr274I CTCGAG 1 cut(s) 1301
SfuI TTCGAA 1 cut(s) 3204
SinI GGWCC 6 cut(s) 617, 1082, 1384, 3260, 3490, 4303
SlaI CTCGAG 1 cut(s) 1301
SmiMI CAYNNNNRTG 6 cut(s) 777, 929, 1877, 3125, 3614, 3977
SmlI CTYRAG 8 cut(s) 176, 329, 971, 1301, 1375, 1687, 2971, 4238
SmoI CTYRAG 8 cut(s) 176, 329, 971, 1301, 1375, 1687, 2971, 4238
SpeI ACTAGT 1 cut(s) 95
SphI GCATGC 1 cut(s) 1587
SseBI AGGCCT 1 cut(s) 2292
SspI AATATT 2 cut(s) 2309, 3296
SspMI CTAG 9 cut(s) 96, 668, 824, 864, 1962, 2105, 3108, 3189, 4086
SstI GAGCTC 3 cut(s) 62, 177, 1575
StuI AGGCCT 1 cut(s) 2292
StyI CCWWGG 5 cut(s) 823, 2104, 2608, 3486, 3724
TaiI ACGT 9 cut(s) 129, 282, 820, 1229, 1291, 1767, 2896, 3399, 3663
TaqI TCGA 8 cut(s) 44, 68, 92, 399, 542, 1302, 3150, 3204
TaqII GACCGA 1 cut(s) 3264
TatI WGTACW 3 cut(s) 1629, 2295, 3585
TauI GCSGC 5 cut(s) 8, 11, 188, 711, 2232
TfiI GAWTC 6 cut(s) 423, 1323, 1907, 2432, 2867, 3061
TscAI CASTG 6 cut(s) 1821, 1905, 2091, 2305, 2683, 3566
TseFI GTSAC 6 cut(s) 697, 1057, 1369, 1429, 1879, 4175
Tsp45I GTSAC 6 cut(s) 697, 1057, 1369, 1429, 1879, 4175
TspGWI ACGGA 2 cut(s) 151, 2015
TspRI CASTG 6 cut(s) 1821, 1905, 2091, 2305, 2683, 3566
Vha464I CTTAAG 1 cut(s) 1687
VpaK11BI GGWCC 6 cut(s) 617, 1082, 1384, 3260, 3490, 4303
VspI ATTAAT 1 cut(s) 2202
XbaI TCTAGA 1 cut(s) 863
XceI RCATGY 4 cut(s) 232, 1523, 1587, 3976
XcmI CCANNNNNNNNNTGG 2 cut(s) 2524, 3076
XhoI CTCGAG 1 cut(s) 1301
XmaJI CCTAGG 2 cut(s) 823, 2104
XmiI GTMKAC 1 cut(s) 92
XmnI GAANNNNTTC 3 cut(s) 3739, 3808, 4064
XspI CTAG 9 cut(s) 96, 668, 824, 864, 1962, 2105, 3108, 3189, 4086
Zsp2I ATGCAT 2 cut(s) 913, 3829
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.