pycom02g21460
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
19624486 .. 19631512
7027 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g21460.3

Sequence Viewer

Length: 4419 bp
ATGGCAGCGGAATTGGCCGGAGATCATGGATCAGCTGTGAGCAGCTGGAGGAGGAGCCATGGATCAATGAGCAGGAGGAGCCATGGATCAATGAGCAGGAGAAGTTGGGCGTCCACGAGTTTTCGCGAAGTGTGGAGCAATCGGGGGGATGTGTTCCACCGCAGCGGGAGAGCAGACCAGAAGGACGAGGAGGAGTTGAAATGGGCAGCGATAGAGAGGCTTCCAACAATTGATAGGTTAAGAAGAGGAATGCTTAAGCAGGTGTTGGATAATGGAAATGTTGGTTATGAAGAGATTGACGTTACCAATCTCGGAAGGCTGGACAAGAAGAAACTCATGGAAAATATACTCAAGATTGCTGAACAGGATAATGAGAAGTTCCTTCAAAGGCTGAGAGATAGGACTGATAGGGTTTGGATTGAGATTCCGAAGGTTGAAGTTCGGTTCGAGCATTTATCAGTTGAAGGGGATGCATATGTTGGAACCAGAGCACTTCCTACTCTGCTGAATTCCTCCATGAATACCATAGAGGGGATTCTTGGACTCATTAAGCTCTTCCCGTCAAAGAAAAGAGTAGTCAAGATACTTCGTGACGTGAGTGGAATAGTTAAGCCATCACGAATGACACTACTTCTGGGACCTCCAGGATCAGGGAAGACAACTTTCCTGCAGGCACTTGCTGGCAAGACGGATAAGGATCTAAGGGTATCCGGAAGTATCACTTACTGTGGTCATGAATTTTCGGAGTTTTGTCCTCAAAGAACATGCGCGTATATCAGCCAGCATGATCTGCACAATGGTGAGATGACAGTTAGAGAAACGTTGGATTTTTCAGGAAGATGCTTAGGGGTTGGAACCAGATACGAGCTACTGGCGGAATTGTCTAGACGAGAAATAGAATCAGGAATTACACCTGATCCTGAGATTGATACATTCATGAAAGCCACAGCTCTGGCAGGACAAGAAACCAGTTTATTTACAGACTATATTCTGAAGCTACTTGGATTAGATATTTGTGCTGATATTTTAGTGGGTGACGAGATGCGAAGGGGCATATCTGGTGGACAGAAGAAGCGTCTTACTACAGGAGAAATGTTGGTTGGACCAGCAAAAGCTTATTTCATGGATGAAATATCAACCGGTTTAGACAGTTCGACAACATTCCAAATTGTCCAGTTTATGAGGCAGATGGTTCATACAATGGATATCACCATGACAATCTCTCTTCTGCAACCTGCACCTGAAACCTTTGACCTTTTTGACGACATTATCTTACTTTCAGATGGTCAGATTGTTTACCAAGGTCCACGAGAGAATGCACTCGAATTTTTTGAGAGTGTAGGTTTCAAGTGTCCGGAAAGGAAAGGAGTGGCAGACTTCCTGCAAGAGGTTATTTCCAGAAAGGACCAAGAACAATACTGGTTTAGGCAGAATGAAAATTACCGATATATTAGCACATCGGAATTTTCAGATTATTTTAAAAGTTACCACATTGGTCAAAATCTGTCTGAAGAACTCAGGATTCCTTATGATAGATCTAAAACTCATGCTGCTGCATTAGTGAAAAAAAAGTACGGAATCTCAAACTGGGAACTCTTCAACGCGTGCTTTGCAAGAGAGTGGCTCCTGATGAAGCGGAACTCTGCTCTATACATATTCAAGACTAGTCAGCTCACAATCATGTCAATAATTGCCATGACAATTTTTTTGAGAACAGAAATGAAGCACGGTCAATTACAAGATGGGGGGAAGTTTTATGGTGCACTATTTTTTAGTCTCATAAATGTAATGTTCAACGGGATGACTGAGCTAGCAATGACTATATTCAGGCTTCCTGTATTTTTTAAACAGAGAGATGCATTGTTACACCCAGCATGGGCTTTTAGCTTACCAATTTGGGTCCTCAGGATCCCGGTATCACTGATTGAATCAGGATTATGGATCATTCTCACATATTACACCATCGGTTTTGCTCCTGCAGCTAGTAGGTTTTTCCGCCAACTATTGGCATTATTCAGCGTGCATCAGATGGCCCTATCACTCTTCCGCTTCATTGCAGCTCTTGGCAGAACACAAATTGTTGCAAGCACACTTGGCACCTTCACACTGCTATTGGTTTTTGTCCTCGGTGGATTCATTGTTGCCAAAGATGACATCGAACCATGGATGATATGGGGCTACTATATTTCTCCTATGATGTATGGACAAAATGCAATAGCCATCAATGAATTTCTTGACGAAAGATGGAGTGCACCTAATATTGACCCGCGAATCCCAGAACCAACAGTTGGAAAGGCTCTCCTAAAGGCCAGAGGCATGTTTACAGAAGAGTACTGGTACTGGATATGCATAGGAGCACTCCTCGGGTTTTCCTTACTTTTCAACATCTTGTTTATTGCAGCACTGACTTTTCTGAACCCTTTCGGAGATTCTAAATCTATTATTTTGGAGGACGATGACAAGCAAGGAAGTAAAGAGCAGCCAATCTTGGATAGAATGGGATCCCAGGAATTGAGTTCAGCATTTACTGCCCCAATGCTTAAAGGTATTGATATGGAAGTGATGAAAACTACGAAGCGAGGAATGCTGCCGAAGTTTCAGCCTTTGTCACTTGCATTTGATCATGTGAACTACTATGTTGATATGCCTGCTGAAATGAAGAGACAAGGAATTGAAGAGGATCGCCTCCAATTGTTGCGAGATGCTAGTGGTGCTTTTAGGCCTGGTGTTCTAACAGCATTGGTTGGCGTCAGCGGTGCAGGAAAGACTACCTTGATGGATGTGCTAGCAGGAAGGAAAACTGGTGGTTATATTGAAGGAAGCATCAGCATTTCCGGTTACCCAAAGAACCAGGAAACCTTTGCTCGAGTTAGCGGTTATTGTGAACAAAATGATATCCACTCTCCAAATGTAACTGTTTACGAATCTCTCGTGTACTCTGCTTGGTTGCGTCTTGCAAAGGAAATTACAAAGGAAACACGACAGATGTTTGTGGAGGAAGTCATGGATTTGGTTGAGCTAAAACCTCTGAGGAATTCCTTAGTAGGCCTTCCTGGAATAGATGGTCTGTCAACAGAACAGAGAAAGAGATTAACCGTAGCTGTAGAGCTGGTGGCGAATCCCTCCATAATCTTCATGGATGAGCCAACATCAGGTCTTGATGCAAGAGCTGCTGCAATTGTAATGCGTACAGTGAGAAACACTGTGGATACAGGTCGGACGCTTGTCTGCACTATTCATCAGCCAAGCATAGACATTTTTGAAGCCTTTGATGAGCTTCTGCTGATGAAGAGAGGTGGACAAGTGATTTATGCCGGACCCCTTGGCCGCTGTTCTCAAAAGCTCATAGAATATTTTGAAGCTATTCCCGGAATTACAAAGATCAGAGATGGTTACAATCCTGCAACATGGATGTTGGAAATCACTTCTCCTGCAGTTGAGTCCCGACTCAATGTGGATTTTGCGGATATATACGCGAACTCTGAACTTTATAGGAAGAATCAAGAACTTATAACAGAGCTAAGCACTCCAGTCCCGGGATCTAAAGACCTTTATTTCCCAAGCAAATACTCTCAGTCTTTTCTTACTCAATGCAAAGCTTGCTTCTGGAAACAACATTGGTCATACTGGAGGAACCCGCCATACAATGCCATCCGGCTCTTTTTGACTGTAGTTGTTGGTATCATTTTTGGACTAATTTTCTGGAACAAAGGAGATCAAACTTATAAGGAACAAGACCTATTAAATCTAGTCGGAGCCATGTATTCTGCCGTTCTCTTCCTTGGAGCAACCAACACCGCCTCGGTACAGCCTATTGTGGCAGTTGAAAGAACAGTATTTTACCGCGAAAGAGCAGCAGGGATGTACTCTGCGCTGCCTTATGCTTTTGCTCAGGTGGCGATTGAGACAATTTACGTTGCAATCCAAACTCTGGCGTATAGTCTCATCCTCTTTTCAATGATGGGGTTCACTTGGCACGTTGACAAGTTCTTCTGGTTCTACTACTTTATATTGATGTGCTTTATCTACTTCACATTGTACGGCATGATGCTTGTAGCTCTCACGCCAGGCCACCAAATTGCGGCCATTGTGATGTCCTTTTTCCTGAGCTTCTGGAACCTCTTCTCTGGTTTCCTCCTCCCTAGGATGCAAATCCCGATATGGTGGCGATGGTACTACTGGGGTTCACCGGTGGCTTGGACAATCTACGGACTAGTGACATCCCAAGTGGGAGACAGAACTTCATTAGTTGAAGTTCCAGGTGAAGCTCGTATGTCAGTGCAGGTGTACCTTAAGACAAGATTAGGGTTTGAATATGACTTCCTCGGAGCCGTCGTCGTGGCTCATATTGGTTTCGTGCTCCTGTTCTTGTTCGTCTTTGCCTACGGTATCAAGTGTCTCAACTTCCAAACGAGATGA

Protein Analysis

1473

Amino Acids

167.17

Weight (kDa)

7.28

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 3512, 3726
AarI CACCTGC 2 cut(s) 250, 4273
Acc36I ACCTGC 3 cut(s) 250, 1243, 4273
AccB1I GGYRCC 1 cut(s) 2096
AccB7I CCANNNNNTGG 3 cut(s) 2005, 2288, 3931
AccII CGCG 6 cut(s) 126, 770, 1604, 2269, 3476, 3846
AccIII TCCGGA 2 cut(s) 710, 1354
AclI AACGTT 1 cut(s) 821
AcoI YGGCCR 3 cut(s) 15, 3325, 4083
AcsI RAATTY 6 cut(s) 508, 737, 1325, 1463, 2228, 3034
AcuI CTGAAG 2 cut(s) 1013, 1530
AcyI GRCGYC 2 cut(s) 110, 2748
AflII CTTAAG 2 cut(s) 254, 4292
AflIII ACRYGT 1 cut(s) 1602
AgeI ACCGGT 2 cut(s) 1139, 4189
AhlI ACTAGT 2 cut(s) 1664, 4213
AjiI CACGTC 1 cut(s) 595
AjnI CCWGG 7 cut(s) 643, 2505, 2722, 2850, 3052, 4066, 4258
AjuI GAANNNNNNNTTGG 4 cut(s) 1083, 1115, 2271, 2303
AleI CACNNNNGTG 1 cut(s) 798
Alw21I GWGCWC 5 cut(s) 493, 1765, 2254, 2359, 4362
Alw26I GTCTC 6 cut(s) 1781, 2656, 3899, 3947, 4227, 4403
Alw44I GTGCAC 2 cut(s) 1761, 2250
Ama87I CYCGRG 3 cut(s) 2363, 2865, 3535
Aor13HI TCCGGA 2 cut(s) 710, 1354
AoxI GGCC 8 cut(s) 15, 2031, 2307, 2720, 3046, 3325, 4069, 4083
ApaLI GTGCAC 2 cut(s) 1761, 2250
ApoI RAATTY 6 cut(s) 508, 737, 1325, 1463, 2228, 3034
ArsI GACNNNNNNTTYG 2 cut(s) 1690, 1722
AsiGI ACCGGT 2 cut(s) 1139, 4189
Asp700I GAANNNNTTC 3 cut(s) 2420, 3363, 4121
AspA2I CCTAGG 1 cut(s) 4142
AspLEI GCGC 2 cut(s) 770, 3874
AspS9I GGNCC 7 cut(s) 638, 1103, 1304, 1405, 1900, 2032, 3317
AsuC2I CCSGG 4 cut(s) 1913, 3369, 3536, 3537
AsuHPI GGTGA 5 cut(s) 812, 1046, 1201, 4179, 4274
AsuNHI GCTAGC 2 cut(s) 1810, 2785
AvaI CYCGRG 3 cut(s) 2363, 2865, 3535
AvaII GGWCC 6 cut(s) 638, 1103, 1304, 1405, 1900, 3317
AvrII CCTAGG 1 cut(s) 4142
AxyI CCTNAGG 1 cut(s) 1904
BaeGI GKGCMC 2 cut(s) 1765, 2254
BamHI GGATCC 2 cut(s) 1908, 2501
BanI GGYRCC 1 cut(s) 2096
BauI CACGAG 3 cut(s) 115, 1308, 2930
BbsI GAAGAC 1 cut(s) 662
Bbv12I GWGCWC 5 cut(s) 493, 1765, 2254, 2359, 4362
BceAI ACGGC 3 cut(s) 3755, 4057, 4316
BciT130I CCWGG 7 cut(s) 645, 2507, 2724, 2852, 3054, 4068, 4260
BciVI GTATCC 2 cut(s) 718, 3202
BclI TGATCA 1 cut(s) 2620
BcnI CCSGG 4 cut(s) 1913, 3369, 3536, 3537
BcoDI GTCTC 6 cut(s) 1781, 2656, 3899, 3947, 4227, 4403
BcuI ACTAGT 2 cut(s) 1664, 4213
BfaI CTAG 9 cut(s) 885, 1665, 1811, 1983, 2706, 2786, 3749, 4143, 4214
BfmI CTRYAG 6 cut(s) 668, 1083, 1977, 3102, 3432, 3669
BfrI CTTAAG 2 cut(s) 254, 4292
BfuAI ACCTGC 3 cut(s) 250, 1243, 4273
BfuI GTATCC 2 cut(s) 718, 3202
BglII AGATCT 1 cut(s) 1535
BlnI CCTAGG 1 cut(s) 4142
BlpI GCTNAGC 1 cut(s) 3521
BmcAI AGTACT 1 cut(s) 2333
Bme18I GGWCC 6 cut(s) 638, 1103, 1304, 1405, 1900, 3317
BmeT110I CYCGRG 3 cut(s) 2363, 2865, 3535
BmgBI CACGTC 1 cut(s) 595
BmgT120I GGNCC 7 cut(s) 638, 1103, 1304, 1405, 1900, 2032, 3317
BmrI ACTGGG 2 cut(s) 1597, 4189
BmtI GCTAGC 2 cut(s) 1814, 2789
BmuI ACTGGG 2 cut(s) 1597, 4189
BoxI GACNNNNGTC 1 cut(s) 3224
BpiI GAAGAC 1 cut(s) 662
BplI GAGNNNNNCTC 4 cut(s) 1608, 1640, 2346, 2378
BpmI CTGGAG 4 cut(s) 67, 627, 3513, 3649
Bpu10I CCTNAGC 3 cut(s) 844, 3891, 4106
Bpu1102I GCTNAGC 1 cut(s) 3521
BpuEI CTTGAG 1 cut(s) 335
BpuMI CCSGG 4 cut(s) 1913, 3369, 3536, 3537
BsaBI GATNNNNATC 2 cut(s) 696, 4151
BsaHI GRCGYC 2 cut(s) 110, 2748
BsaWI WCCGGW 5 cut(s) 710, 1139, 1354, 2834, 4189
BsaXI ACNNNNNCTCC 2 cut(s) 4320, 4350
Bse118I RCCGGY 2 cut(s) 1139, 4189
Bse21I CCTNAGG 1 cut(s) 1904
Bse3DI GCAATG 2 cut(s) 1821, 2052
Bse8I GATNNNNATC 2 cut(s) 696, 4151
BseAI TCCGGA 2 cut(s) 710, 1354
BseBI CCWGG 7 cut(s) 645, 2507, 2724, 2852, 3054, 4068, 4260
BseJI GATNNNNATC 2 cut(s) 696, 4151
BseMI GCAATG 2 cut(s) 1821, 2052
BseMII CTCAG 9 cut(s) 383, 912, 1531, 1797, 1918, 3020, 3587, 3905, 4097
BseRI GAGGAG 7 cut(s) 64, 67, 91, 203, 206, 2351, 4127
BseSI GKGCMC 2 cut(s) 1765, 2254
BseYI CCCAGC 1 cut(s) 1870
BsgI GTGCAG 5 cut(s) 776, 1221, 2778, 3214, 4301
Bsh1236I CGCG 6 cut(s) 126, 770, 1604, 2269, 3476, 3846
BshFI GGCC 8 cut(s) 17, 2033, 2309, 2722, 3048, 3327, 4071, 4085
BshNI GGYRCC 1 cut(s) 2096
BshTI ACCGGT 2 cut(s) 1139, 4189
BsiHKAI GWGCWC 5 cut(s) 493, 1765, 2254, 2359, 4362
BsiHKCI CYCGRG 3 cut(s) 2363, 2865, 3535
BslFI GGGAC 3 cut(s) 651, 3427, 3518
BsmAI GTCTC 6 cut(s) 1781, 2656, 3899, 3947, 4227, 4403
BsmFI GGGAC 3 cut(s) 651, 3427, 3518
BsmI GAATGC 3 cut(s) 255, 1321, 2589
BsnI GGCC 8 cut(s) 17, 2033, 2309, 2722, 3048, 3327, 4071, 4085
BsoBI CYCGRG 3 cut(s) 2363, 2865, 3535
Bsp1286I GDGCHC 5 cut(s) 493, 1765, 2254, 2359, 4362
Bsp13I TCCGGA 2 cut(s) 710, 1354
Bsp1720I GCTNAGC 1 cut(s) 3521
Bsp19I CCATGG 3 cut(s) 58, 82, 2162
Bsp68I TCGCGA 1 cut(s) 126
BspANI GGCC 8 cut(s) 17, 2033, 2309, 2722, 3048, 3327, 4071, 4085
BspCNI CTCAG 9 cut(s) 384, 913, 1530, 1798, 1917, 3021, 3586, 3904, 4098
BspEI TCCGGA 2 cut(s) 710, 1354
BspFNI CGCG 6 cut(s) 126, 770, 1604, 2269, 3476, 3846
BspHI TCATGA 2 cut(s) 733, 936
BspMAI CTGCAG 3 cut(s) 672, 1981, 3436
BspMI ACCTGC 3 cut(s) 250, 1243, 4273
BspOI GCTAGC 2 cut(s) 1814, 2789
BspQI GCTCTTC 1 cut(s) 560
BspT107I GGYRCC 1 cut(s) 2096
BspTI CTTAAG 2 cut(s) 254, 4292
BsrDI GCAATG 2 cut(s) 1821, 2052
BsrFI RCCGGY 2 cut(s) 1139, 4189
BssAI RCCGGY 2 cut(s) 1139, 4189
BssNI GRCGYC 2 cut(s) 110, 2748
BssSI CACGAG 3 cut(s) 115, 1308, 2930
BssT1I CCWWGG 7 cut(s) 58, 82, 1300, 2162, 3322, 3781, 4142
Bst2BI CACGAG 3 cut(s) 115, 1308, 2930
Bst2UI CCWGG 7 cut(s) 645, 2507, 2724, 2852, 3054, 4068, 4260
BstACI GRCGYC 2 cut(s) 110, 2748
BstAFI CTTAAG 2 cut(s) 254, 4292
BstAPI GCANNNNNTGC 4 cut(s) 790, 2528, 3170, 3600
BstDSI CCRYGG 3 cut(s) 58, 82, 2162
BstEII GGTNACC 1 cut(s) 2837
BstENI CCTNNNNNAGG 1 cut(s) 1385
BstFNI CGCG 6 cut(s) 126, 770, 1604, 2269, 3476, 3846
BstHHI GCGC 2 cut(s) 770, 3874
BstMAI GTCTC 6 cut(s) 1781, 2656, 3899, 3947, 4227, 4403
BstNI CCWGG 7 cut(s) 645, 2507, 2724, 2852, 3054, 4068, 4260
BstNSI RCATGY 2 cut(s) 768, 2320
BstPAI GACNNNNGTC 1 cut(s) 3224
BstPI GGTNACC 1 cut(s) 2837
BstSFI CTRYAG 6 cut(s) 668, 1083, 1977, 3102, 3432, 3669
BstSLI GKGCMC 2 cut(s) 1765, 2254
BstUI CGCG 6 cut(s) 126, 770, 1604, 2269, 3476, 3846
BstV2I GAAGAC 1 cut(s) 662
BstX2I RGATCY 5 cut(s) 697, 1535, 1908, 2501, 3539
BstXI CCANNNNNNTGG 1 cut(s) 952
BstYI RGATCY 5 cut(s) 697, 1535, 1908, 2501, 3539
Bsu36I CCTNAGG 1 cut(s) 1904
BsuI GTATCC 2 cut(s) 718, 3202
BsuRI GGCC 8 cut(s) 17, 2033, 2309, 2722, 3048, 3327, 4071, 4085
BtgI CCRYGG 3 cut(s) 58, 82, 2162
BtgZI GCGATG 1 cut(s) 4183
BtrI CACGTC 1 cut(s) 595
BtsI GCAGTG 1 cut(s) 2105
BtsIMutI CAGTG 6 cut(s) 1919, 2105, 2402, 3198, 3201, 4284
BtuMI TCGCGA 1 cut(s) 126
BveI ACCTGC 3 cut(s) 250, 1243, 4273
CciI TCATGA 2 cut(s) 733, 936
CfoI GCGC 2 cut(s) 770, 3874
Cfr10I RCCGGY 2 cut(s) 1139, 4189
Cfr13I GGNCC 7 cut(s) 638, 1103, 1304, 1405, 1900, 2032, 3317
Cfr9I CCCGGG 1 cut(s) 3535
CseI GACGC 5 cut(s) 99, 1064, 2737, 2939, 3229
CspAI ACCGGT 2 cut(s) 1139, 4189
DraI TTTAAA 2 cut(s) 1480, 1846
EaeI YGGCCR 3 cut(s) 15, 3325, 4083
EciI GGCGGA 2 cut(s) 890, 1985
Eco130I CCWWGG 7 cut(s) 58, 82, 1300, 2162, 3322, 3781, 4142
Eco147I AGGCCT 2 cut(s) 2722, 3048
Eco32I GATATC 2 cut(s) 1207, 2896
Eco47I GGWCC 6 cut(s) 638, 1103, 1304, 1405, 1900, 3317
Eco57I CTGAAG 2 cut(s) 1013, 1530
Eco81I CCTNAGG 1 cut(s) 1904
Eco88I CYCGRG 3 cut(s) 2363, 2865, 3535
Eco91I GGTNACC 1 cut(s) 2837
EcoNI CCTNNNNNAGG 1 cut(s) 1385
EcoO109I RGGNCCY 2 cut(s) 638, 1900
EcoO65I GGTNACC 1 cut(s) 2837
EcoRI GAATTC 2 cut(s) 508, 3034
EcoRII CCWGG 7 cut(s) 643, 2505, 2722, 2850, 3052, 4066, 4258
EcoRV GATATC 2 cut(s) 1207, 2896
EcoT14I CCWWGG 7 cut(s) 58, 82, 1300, 2162, 3322, 3781, 4142
EcoT22I ATGCAT 3 cut(s) 475, 1861, 2351
ErhI CCWWGG 7 cut(s) 58, 82, 1300, 2162, 3322, 3781, 4142
FalI AAGNNNNNCTT 4 cut(s) 706, 738, 2756, 2788
FaqI GGGAC 3 cut(s) 651, 3427, 3518
FauI CCCGC 3 cut(s) 158, 2274, 3645
FauNDI CATATG 1 cut(s) 475
FbaI TGATCA 1 cut(s) 2620
FspBI CTAG 9 cut(s) 885, 1665, 1811, 1983, 2706, 2786, 3749, 4143, 4214
GlaI GCGC 2 cut(s) 769, 3873
GsaI CCCAGC 1 cut(s) 1874
GsuI CTGGAG 4 cut(s) 67, 627, 3513, 3649
HaeIII GGCC 8 cut(s) 17, 2033, 2309, 2722, 3048, 3327, 4071, 4085
HgaI GACGC 5 cut(s) 99, 1064, 2737, 2939, 3229
HhaI GCGC 2 cut(s) 770, 3874
Hin1I GRCGYC 2 cut(s) 110, 2748
Hin6I GCGC 2 cut(s) 768, 3872
HinP1I GCGC 2 cut(s) 768, 3872
HincII GTYRAC 2 cut(s) 3072, 3982
HindII GTYRAC 2 cut(s) 3072, 3982
HindIII AAGCTT 2 cut(s) 1113, 3597
HphI GGTGA 5 cut(s) 812, 1046, 1201, 4179, 4274
Hpy99I CGWCG 2 cut(s) 4337, 4340
HpyCH4IV ACGT 5 cut(s) 300, 594, 821, 3915, 3978
HpySE526I ACGT 5 cut(s) 300, 594, 821, 3915, 3978
Hsp92I GRCGYC 2 cut(s) 110, 2748
HspAI GCGC 2 cut(s) 768, 3872
Kpn2I TCCGGA 2 cut(s) 710, 1354
Ksp22I TGATCA 1 cut(s) 2620
LguI GCTCTTC 1 cut(s) 560
MaeI CTAG 9 cut(s) 885, 1665, 1811, 1983, 2706, 2786, 3749, 4143, 4214
MaeII ACGT 5 cut(s) 300, 594, 821, 3915, 3978
MfeI CAATTG 3 cut(s) 228, 2690, 3177
MflI RGATCY 5 cut(s) 697, 1535, 1908, 2501, 3539
MhlI GDGCHC 5 cut(s) 493, 1765, 2254, 2359, 4362
MluI ACGCGT 1 cut(s) 1602
MlyI GAGTC 3 cut(s) 537, 3441, 3449
Mph1103I ATGCAT 3 cut(s) 475, 1861, 2351
MroI TCCGGA 2 cut(s) 710, 1354
MroXI GAANNNNTTC 3 cut(s) 2420, 3363, 4121
MslI CAYNNNNRTG 3 cut(s) 798, 1679, 4091
MspA1I CMGCKG 6 cut(s) 8, 35, 45, 165, 2754, 3330
MspCI CTTAAG 2 cut(s) 254, 4292
MunI CAATTG 3 cut(s) 228, 2690, 3177
Mva1269I GAATGC 3 cut(s) 255, 1321, 2589
MvaI CCWGG 7 cut(s) 645, 2507, 2724, 2852, 3054, 4068, 4260
MvnI CGCG 6 cut(s) 126, 770, 1604, 2269, 3476, 3846
NciI CCSGG 4 cut(s) 1913, 3369, 3536, 3537
NcoI CCATGG 3 cut(s) 58, 82, 2162
NdeI CATATG 1 cut(s) 475
NheI GCTAGC 2 cut(s) 1810, 2785
NmuCI GTSAC 4 cut(s) 590, 1034, 2607, 4216
NruI TCGCGA 1 cut(s) 126
NsiI ATGCAT 3 cut(s) 475, 1861, 2351
NspI RCATGY 2 cut(s) 768, 2320
OliI CACNNNNGTG 1 cut(s) 798
PaeR7I CTCGAG 1 cut(s) 2865
PagI TCATGA 2 cut(s) 733, 936
PaqCI CACCTGC 2 cut(s) 250, 4273
PceI AGGCCT 2 cut(s) 2722, 3048
PciSI GCTCTTC 1 cut(s) 560
PcsI WCGNNNNNNNCGW 2 cut(s) 2928, 4332
PctI GAATGC 3 cut(s) 255, 1321, 2589
PdmI GAANNNNTTC 3 cut(s) 2420, 3363, 4121
PflMI CCANNNNNTGG 3 cut(s) 2005, 2288, 3931
PfoI TCCNGGA 3 cut(s) 643, 3052, 3367
PinAI ACCGGT 2 cut(s) 1139, 4189
PleI GAGTC 3 cut(s) 537, 3441, 3448
PpsI GAGTC 3 cut(s) 537, 3441, 3448
PpuMI RGGWCCY 2 cut(s) 638, 1900
PshAI GACNNNNGTC 1 cut(s) 3224
PsiI TTATAA 2 cut(s) 3512, 3726
Psp1406I AACGTT 1 cut(s) 821
Psp5II RGGWCCY 2 cut(s) 638, 1900
Psp6I CCWGG 7 cut(s) 643, 2505, 2722, 2850, 3052, 4066, 4258
PspEI GGTNACC 1 cut(s) 2837
PspFI CCCAGC 1 cut(s) 1870
PspGI CCWGG 7 cut(s) 643, 2505, 2722, 2850, 3052, 4066, 4258
PspPI GGNCC 7 cut(s) 638, 1103, 1304, 1405, 1900, 2032, 3317
PspPPI RGGWCCY 2 cut(s) 638, 1900
PspXI VCTCGAGB 1 cut(s) 2865
PsrI GAACNNNNNNTAC 2 cut(s) 3626, 3658
PstI CTGCAG 3 cut(s) 672, 1981, 3436
PsuI RGATCY 5 cut(s) 697, 1535, 1908, 2501, 3539
PvuII CAGCTG 2 cut(s) 35, 45
RruI TCGCGA 1 cut(s) 126
RseI CAYNNNNRTG 3 cut(s) 798, 1679, 4091
SapI GCTCTTC 1 cut(s) 560
Sau96I GGNCC 7 cut(s) 638, 1103, 1304, 1405, 1900, 2032, 3317
SbfI CCTGCAGG 1 cut(s) 672
ScaI AGTACT 1 cut(s) 2333
SchI GAGTC 3 cut(s) 537, 3441, 3449
SdaI CCTGCAGG 1 cut(s) 672
SduI GDGCHC 5 cut(s) 493, 1765, 2254, 2359, 4362
SfcI CTRYAG 6 cut(s) 668, 1083, 1977, 3102, 3432, 3669
Sfr274I CTCGAG 1 cut(s) 2865
SgrAI CRCCGGYG 1 cut(s) 4189
SinI GGWCC 6 cut(s) 638, 1103, 1304, 1405, 1900, 3317
SlaI CTCGAG 1 cut(s) 2865
SmaI CCCGGG 1 cut(s) 3537
SmiMI CAYNNNNRTG 3 cut(s) 798, 1679, 4091
SmlI CTYRAG 4 cut(s) 254, 350, 2865, 4292
SmoI CTYRAG 4 cut(s) 254, 350, 2865, 4292
SpeI ACTAGT 2 cut(s) 1664, 4213
Sse8387I CCTGCAGG 1 cut(s) 672
SseBI AGGCCT 2 cut(s) 2722, 3048
SspI AATATT 2 cut(s) 2260, 3353
SspMI CTAG 9 cut(s) 885, 1665, 1811, 1983, 2706, 2786, 3749, 4143, 4214
StuI AGGCCT 2 cut(s) 2722, 3048
StyI CCWWGG 7 cut(s) 58, 82, 1300, 2162, 3322, 3781, 4142
TaiI ACGT 5 cut(s) 303, 597, 824, 3918, 3981
TaqI TCGA 5 cut(s) 447, 1154, 1323, 2157, 2866
TatI WGTACW 3 cut(s) 2331, 2934, 3864
TauI GCSGC 2 cut(s) 3330, 4085
TscAI CASTG 6 cut(s) 1926, 2112, 2409, 3198, 3208, 4284
TseFI GTSAC 4 cut(s) 590, 1034, 2607, 4216
Tsp45I GTSAC 4 cut(s) 590, 1034, 2607, 4216
TspGWI ACGGA 3 cut(s) 704, 1590, 4224
TspMI CCCGGG 1 cut(s) 3535
TspRI CASTG 6 cut(s) 1926, 2112, 2409, 3198, 3208, 4284
Van91I CCANNNNNTGG 3 cut(s) 2005, 2288, 3931
Vha464I CTTAAG 2 cut(s) 254, 4292
VneI GTGCAC 2 cut(s) 1761, 2250
VpaK11BI GGWCC 6 cut(s) 638, 1103, 1304, 1405, 1900, 3317
XagI CCTNNNNNAGG 1 cut(s) 1385
XapI RAATTY 6 cut(s) 508, 737, 1325, 1463, 2228, 3034
XbaI TCTAGA 1 cut(s) 884
XceI RCATGY 2 cut(s) 768, 2320
XcmI CCANNNNNNNNNTGG 2 cut(s) 2169, 3133
XhoI CTCGAG 1 cut(s) 2865
XmaI CCCGGG 1 cut(s) 3535
XmaJI CCTAGG 1 cut(s) 4142
XmnI GAANNNNTTC 3 cut(s) 2420, 3363, 4121
XspI CTAG 9 cut(s) 885, 1665, 1811, 1983, 2706, 2786, 3749, 4143, 4214
ZrmI AGTACT 1 cut(s) 2333
Zsp2I ATGCAT 3 cut(s) 475, 1861, 2351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.