pycom03g09270

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
7729294 .. 7736524
7231 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g09270.17

Sequence Viewer

Length: 4326 bp
ATGTCTATAGCGACAGCGCTTGCCGGGGAGGACTTATCCCGGCAGACCAGCAGCCGGGGGAGCTGGCGGTCTGCGAGTGTGAGGGAGATGTGGAACGCGCCGGACGTTTTTCAGCGAAGCGGTCGGCAGCAGGTGTTGGATGAGGAGGAGGAGCTCAAGTGGGCGGCCATAGAGAGGCTGCCCACATATGATAGGATGAGGAAAGGGATGCTGAGGCAGGCCATGAGCAATGGGAGGGTTTTGACTGAAGAAGTCGACACGGCGAATCTTGGGGAGCAAGATAAGAAGCAGTTGATGGAGAGCATACTTAAGGTTGTGGAGGATGACAATGAAAAGTTCTTGCAGAGAATGAGAGCCAGAAATGAAAGGGTTGGGATTGATGTGCCTAAAGTTGAGGTTAGATTTGAGAAATTATCAATAGAGGGAGATGCATATGTTGGCAGCAGAGCACTTCCAACACTGCTAAATTCTTCCTTGAACATGATAGAGGGAATAATTGGAAAGCTTAAACTCGTACCATCAAAGAAAAGAAATGTTCAGATTCTCAAAGATGTGAGCGGCATCGTGAGGCCATCGAGGATGACACTGCTTCTGGGACCTCCTTCATCAGGAAAAACAACACTTCTAAAAGCGCTTGCGGGCAAACTTGATAAGGATCTAAGGGTAAGTGGAAAAGTGACCTACTGTGGCCATGAATTTGAGGAGTTTGTGCCTCAGAGAACCTCTGCTTACATTAGCCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAAACGTTGGACTTTTCCGGACGTTGCCTGGGAGTTGGAACCAGGTACGATATGCTGGTAGAGCTGTCTAGACGGGAGAAAGATTCTGGTATCAAACCAGACCCTGAAATCGATGCATTCATGAAAGCAACATCTTTGGCTGGCCAGGAGACGAGTTTGATCACAGATTACGTTCTCAAGATACTCGGATTAGATATTTGTGCTGATACCGTTGTTGGTGATGACATGAGAAGGGGCATATCTGGTGGACAAAAGAAACGGGTTACAACTGGAGAAATGTTGGTTGGACCAGCGAAAGCGTTCTTCATGGACGAAATTTCAACGGGGCTGGACAGTTCGACTACCTTTCAGATTGTCAAGTTCATGAGGCAGATGGTTCACATTCTGGATGTGACAATGGTCATCTCTCTTTTGCAACCTGCACCAGAAACATATGATCTTTTTGATGACATTATCCTTATTTCTGAGGGTCAGATTGTGTACCAAGGCCCACGAGAGAATGTACTTGAATTCTTCGAATATATGGGGTTCAGATGCCCTGACAGAAAAGGTGTCGCAGATTTCTTGCAAGAAGTGACCTCAAAGATCGATCAAGAACAATACTGGTTTAAGAAGAATGAACCATTCAGATATGTCTCTGTAGCTGATTTTGCACAGGCTTTCACCACTTTTCATGTTGGCCAACGTCTTGCTGAAGACCTAAGAGTTCCGTATGACAAAAGAACAGCCCATCCTGCTGCCTTGGTGAAGGAAAAGTATGGAATAAGCAGTATGGACCTTTTCAAGGCATGCTTTGCAAGGGAATGGTTGCTGATGAAGCGTAACTCATTTGTGTACATATTCAAGACTGTACAGATAGCAATCATGGCTACAATTACTTTCACTGTATTCTTCAGAACAGAAATGAAACCTGGGCAGTTAGGGGATTCGGCAAAATTCATGGGAGCATTGTTTTTCAGTCTCATTAATGTCATGTTTAATGGAGTGGCAGAGCTTTCAATGACAGTTTTCAGGCTTCCGGTGTTCTTTAAACAGAGGGATGCCTTATTCTACCCTGGATGGGCTTTTGCCTTGCCCATTTGGCTAACCAGAATTCCCATTTCGTTTATGGAATCTTTAATATGGATCTGTTTGACATACTATACCGTTGGATTTGCACCTGAGGCCAGTAGGTTCTTCAAACAGCTCTTGGCTTACTTCGGTATACATCAAATGGCACTCGGACTCTTCCGTTTCATTGCTGGCCTTGGAAGATCAGAGATTCGAGCGAGCACTATTGGTTCCTTTGCATTGCTAATAGTGTTTGTCCTAGGAGGCTTTGTTGTTTCTAAAAATGACCTCGAGCCGTGGATGCTATGGACCTACTATATTTCACCTATGATGTATGGACAAAATGCAATTGCCATCAATGAGTTTCTTGACAAAAGATGGAGCACTCCTGTCCTCAACGCCGCTGAAAACACAGTTGGAAAGGTCCTTCTGGCGGGAAGAGGCCTGTTTACCACGGAGACTTGGTTTTGGATTTGTGTTGGGGCGCTTTTCGGGTTTTCTATTCTTTTTAATCTTCTCTTCGTTGCAGCATTGACCTTCTTAGACCCAATTGTTGATAATAAAACCTTAATTGCTACTGACGACTCTGAAAATAAGAGGAAGGGACGACCCAATCCAGAAGGTACTGATATGCAAGTGAGAAATCAAGCCAAAAAAGGAATGGTTTTGCCCTTTGAGCCCCTTTCACTTGCTTTCAACCATGTGAACTACTATGTGGATATGCCTCCTGAAATGAAGAGCCAAGGGATTGAAGAGACTCGACTCCAACTTCTACGAGATGTTAGTGGTGCATTTAGGCCAGGTGTTCTGACTGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACAACCTTGATGGATGTTTTAGCCGGAAGAAAGACTGGTGGGTATATTGAAGGAAGTATTACCATCTCTGGATACCCAAAGAACCAAGCCACATTTGCTCGGGTCAGCGGCTACTGTGAACAAAATGACATTCATTCACCATATGTTACTGTTTATGAATCTCTCGTATACTCTGCCTGGTTACGTCTTGCCAAGGATGTCACGAAGGATAAACGAAAGATGTTTGTTGATGAGGTCATAGATTTGGTTGAGCTTAATCCCTTGAGGAATGCTTTAGTTGGACTTCCGGGAGTTAATGGGCTTTCAACTGAGCAGAGAAAAAGGTTGACTATTGCTGTAGAATTGGTTGCTAATCCTTCCATCATCTTTATGGATGAACCGACATCGGGTCTTGATGCTAGAGCAGCTGCTATTGTTATGCGTACTGTTAGAAACACTGTGGATACCGGACGAACTGTTGTTTGCACTATTCACCAACCTAGCATTGACATTTTTGAGGCTTTTGATGAGCTGTTCCTTATGAAGAGAGGAGGACAAGTTATTTATGCTGGACCTCTAGGTGCCCAGTCTCACAAGCTCGTTGAATATTTCGAGGCTATTCCAGGGGTTCCGAAGATCGATCTCAAAGAGGGTTACAATCCTGCTACCTGGATGTTAGACGTCAGCTCAGCTGCCGTTGAGGCTCAAAATGATGTAGACTTTGCAGAAATATTTGCAAACTCTGATCTCTATAGGAGAAACCAGGAACTTATCAAGGAACTAAGCACACCACAACCAGGCTCCAAGGATCTTCACTTCCCCACCCAATTCTCCCAAAGCTTTTTAACTCAGTGCCAAGCGTGCTTCTGGAAACAGCACTGGTCATACTGGAGGAACTCGCAGTATAATGCCATTAGGTTTTTCATGACAATTTCCGTTGGAGTTATATTTGGTATTATCTTCTGGAACAAAGGAAAGAAAATGGATACACAACAAGACATCATGAATCTGTTGGGGGCAGGATATGCTGCTGTTCTTTTCCTTGGAGCGGGCAATGCTTCTGCTGTGCAATCGGTTGTTGCTGTTGAACGAACAGTTTTCTACCGTGAAAGAGCTGCTGGGATGTATTCCGAGTTGCCTTATGCATTTTCTCAGGTGGCTATTGAGACACTTTACGTTTTAATCCAAACCTTTGCGTATTCAGTTATTTTGTATGGCATGATTGGGTTCGATTGGAAGGTGGACAAATTTTTGTACTTCTACTATTTCATATTCATGTGCTTCACATATTTCTCCATGTACGGGATGATGGCAGTTGCCCTAACTCCTGGTCCCCAAATTGCTGCAATTGTTATGGGCTTCTTCATGAGCTTTTGGAACTTGTTCTCTGGTTTCCTCGTCCCACGAACGCTAATTCCCATCTGGTGGAGGTGGTACTACTGGGGTTCTCCAGTTGCCTGGACAATCTATGGCATCTTCGCATCTCAAATGGGCGATATTACGAAGGATATCATAATTCCTGGTGAGGAATCCAAGCCAGTGAATCAGTTCCTCAAGGACTATTTGGGTTATGAAGAAGATTTTGTAATCCCGGTGGTGTTTGGTCATGTTGGTTGGGTCCTTCTCTTCTTCTTCATGTTTGCGTACGGCATCAAGTACCTTAACTTCCAAAGGAGATAA

Protein Analysis

1442

Amino Acids

163.16

Weight (kDa)

6.95

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 121
AatII GACGTC 1 cut(s) 3330
Acc36I ACCTGC 2 cut(s) 121, 1201
AccB1I GGYRCC 1 cut(s) 3227
AccB7I CCANNNNNTGG 1 cut(s) 4071
AccBSI CCGCTC 2 cut(s) 558, 3695
AccI GTMKAC 4 cut(s) 255, 1978, 2835, 3363
AccII CGCG 1 cut(s) 98
AccIII TCCGGA 1 cut(s) 791
AciI CCGC 9 cut(s) 67, 120, 164, 558, 638, 2226, 2258, 2775, 3695
AclI AACGTT 1 cut(s) 779
AclWI GGATC 3 cut(s) 663, 1907, 3462
AcoI YGGCCR 4 cut(s) 165, 688, 916, 1453
AcsI RAATTY 7 cut(s) 466, 695, 1089, 1283, 1709, 1866, 3893
AcuI CTGAAG 3 cut(s) 267, 1488, 1651
AcyI GRCGYC 1 cut(s) 3327
AfeI AGCGCT 2 cut(s) 18, 633
AflII CTTAAG 1 cut(s) 308
AhdI GACNNNNNGTC 1 cut(s) 3054
AjuI GAANNNNNNNTTGG 4 cut(s) 1041, 1073, 2223, 2255
AloI GAACNNNNNNTCC 4 cut(s) 1489, 1521, 4045, 4077
Alw21I GWGCWC 4 cut(s) 156, 451, 2048, 2210
Alw26I GTCTC 7 cut(s) 917, 1414, 1739, 2276, 2573, 3240, 3806
AlwI GGATC 3 cut(s) 663, 1907, 3462
AlwNI CAGNNNCTG 1 cut(s) 878
Ama87I CYCGRG 2 cut(s) 2114, 2766
Aor13HI TCCGGA 1 cut(s) 791
Aor51HI AGCGCT 2 cut(s) 18, 633
ApoI RAATTY 7 cut(s) 466, 695, 1089, 1283, 1709, 1866, 3893
AseI ATTAAT 1 cut(s) 1740
Asp700I GAANNNNTTC 3 cut(s) 1073, 4028, 4193
AspA2I CCTAGG 1 cut(s) 2083
AspLEI GCGC 4 cut(s) 19, 100, 634, 2311
AspS9I GGNCC 9 cut(s) 596, 1061, 1262, 1549, 2133, 2248, 3218, 3977, 4264
AsuC2I CCSGG 5 cut(s) 25, 40, 56, 2955, 4238
AsuHPI GGTGA 8 cut(s) 770, 1004, 1429, 1531, 2139, 2796, 3131, 4181
AsuII TTCGAA 1 cut(s) 1290
AvaI CYCGRG 2 cut(s) 2114, 2766
AvaII GGWCC 8 cut(s) 596, 1061, 1549, 2133, 2248, 3218, 3977, 4264
AvrII CCTAGG 1 cut(s) 2083
AxyI CCTNAGG 1 cut(s) 1935
BaeGI GKGCMC 1 cut(s) 3232
BaeI ACNNNNGTAYC 2 cut(s) 972, 1005
BalI TGGCCA 3 cut(s) 690, 918, 1455
BanI GGYRCC 1 cut(s) 3227
BanII GRGCYC 2 cut(s) 156, 2505
BarI GAAGNNNNNNTAC 1 cut(s) 4295
BauI CACGAG 1 cut(s) 1266
BbsI GAAGAC 1 cut(s) 1476
Bbv12I GWGCWC 4 cut(s) 156, 451, 2048, 2210
BbvCI CCTCAGC 1 cut(s) 212
BceAI ACGGC 4 cut(s) 276, 2104, 3326, 4309
BciVI GTATCC 3 cut(s) 2732, 3103, 3625
BclI TGATCA 1 cut(s) 933
BcnI CCSGG 5 cut(s) 25, 40, 56, 2955, 4238
BcoDI GTCTC 7 cut(s) 917, 1414, 1739, 2276, 2573, 3240, 3806
BfaI CTAG 5 cut(s) 843, 2084, 3066, 3147, 3224
BfmI CTRYAG 4 cut(s) 6, 1413, 3003, 3397
BfoI RGCGCY 3 cut(s) 20, 635, 2312
BfrI CTTAAG 1 cut(s) 308
BfuAI ACCTGC 2 cut(s) 121, 1201
BfuI GTATCC 3 cut(s) 2732, 3103, 3625
BglI GCCNNNNNGGC 2 cut(s) 1855, 3347
BlnI CCTAGG 1 cut(s) 2083
BlpI GCTNAGC 1 cut(s) 3334
Bme18I GGWCC 8 cut(s) 596, 1061, 1549, 2133, 2248, 3218, 3977, 4264
BmeRI GACNNNNNGTC 1 cut(s) 3054
BmeT110I CYCGRG 2 cut(s) 2114, 2766
BmgT120I GGNCC 9 cut(s) 596, 1061, 1262, 1549, 2133, 2248, 3218, 3977, 4264
BmiI GGNNCC 8 cut(s) 597, 814, 2056, 3229, 3276, 3448, 3979, 4265
BmrI ACTGGG 2 cut(s) 3226, 4096
BmuI ACTGGG 2 cut(s) 3226, 4096
BoxI GACNNNNGTC 1 cut(s) 1172
BpiI GAAGAC 1 cut(s) 1476
BpmI CTGGAG 3 cut(s) 1065, 3556, 4080
Bpu10I CCTNAGC 1 cut(s) 212
Bpu1102I GCTNAGC 1 cut(s) 3334
Bpu14I TTCGAA 1 cut(s) 1290
BpuEI CTTGAG 4 cut(s) 140, 935, 2950, 4184
BpuMI CCSGG 5 cut(s) 25, 40, 56, 2955, 4238
Bsa29I ATCGAT 3 cut(s) 885, 1362, 3285
BsaBI GATNNNNATC 2 cut(s) 654, 1634
BsaHI GRCGYC 1 cut(s) 3327
BsaWI WCCGGW 3 cut(s) 791, 1792, 3113
BsaXI ACNNNNNCTCC 8 cut(s) 143, 173, 2079, 2109, 2273, 2303, 3189, 3219
Bse21I CCTNAGG 1 cut(s) 1935
Bse3DI GCAATG 4 cut(s) 235, 2010, 2063, 3706
Bse8I GATNNNNATC 2 cut(s) 654, 1634
BseAI TCCGGA 1 cut(s) 791
BseCI ATCGAT 3 cut(s) 885, 1362, 3285
BseJI GATNNNNATC 2 cut(s) 654, 1634
BseMI GCAATG 4 cut(s) 235, 2010, 2063, 3706
BseMII CTCAG 8 cut(s) 203, 728, 1230, 1926, 2967, 3348, 3509, 3812
BseRI GAGGAG 5 cut(s) 158, 161, 164, 716, 3210
BseSI GKGCMC 1 cut(s) 3232
BseYI CCCAGC 1 cut(s) 3764
BsgI GTGCAG 1 cut(s) 1179
Bsh1236I CGCG 1 cut(s) 98
Bsh1285I CGRYCG 1 cut(s) 124
BshNI GGYRCC 1 cut(s) 3227
BshVI ATCGAT 3 cut(s) 885, 1362, 3285
BsiEI CGRYCG 1 cut(s) 124
BsiHKAI GWGCWC 4 cut(s) 156, 451, 2048, 2210
BsiHKCI CYCGRG 2 cut(s) 2114, 2766
BsiWI CGTACG 1 cut(s) 4290
BslFI GGGAC 4 cut(s) 609, 2442, 3963, 4031
BsmAI GTCTC 7 cut(s) 917, 1414, 1739, 2276, 2573, 3240, 3806
BsmBI CGTCTC 1 cut(s) 917
BsmFI GGGAC 4 cut(s) 609, 2442, 3963, 4031
BsmI GAATGC 2 cut(s) 890, 2941
BsoBI CYCGRG 2 cut(s) 2114, 2766
Bsp119I TTCGAA 1 cut(s) 1290
Bsp1286I GDGCHC 6 cut(s) 156, 451, 2048, 2210, 2505, 3232
Bsp13I TCCGGA 1 cut(s) 791
Bsp1407I TGTACA 2 cut(s) 1608, 1624
Bsp1720I GCTNAGC 1 cut(s) 3334
BspACI CCGC 9 cut(s) 67, 120, 164, 558, 638, 2226, 2258, 2775, 3695
BspCNI CTCAG 8 cut(s) 204, 727, 1231, 1927, 2968, 3347, 3508, 3811
BspDI ATCGAT 3 cut(s) 885, 1362, 3285
BspEI TCCGGA 1 cut(s) 791
BspFNI CGCG 1 cut(s) 98
BspHI TCATGA 5 cut(s) 894, 1137, 3570, 3648, 4011
BspLI GGNNCC 8 cut(s) 597, 814, 2056, 3229, 3276, 3448, 3979, 4265
BspMI ACCTGC 2 cut(s) 121, 1201
BspPI GGATC 3 cut(s) 663, 1907, 3462
BspQI GCTCTTC 1 cut(s) 2555
BspT104I TTCGAA 1 cut(s) 1290
BspT107I GGYRCC 1 cut(s) 3227
BspTI CTTAAG 1 cut(s) 308
BsrBI CCGCTC 2 cut(s) 558, 3695
BsrDI GCAATG 4 cut(s) 235, 2010, 2063, 3706
BsrGI TGTACA 2 cut(s) 1608, 1624
BssNAI GTATAC 2 cut(s) 1979, 2836
BssNI GRCGYC 1 cut(s) 3327
BssSI CACGAG 1 cut(s) 1266
BssT1I CCWWGG 8 cut(s) 1258, 1515, 2020, 2083, 2566, 2859, 3450, 3688
Bst1107I GTATAC 2 cut(s) 1979, 2836
Bst2BI CACGAG 1 cut(s) 1266
Bst6I CTCTTC 7 cut(s) 2006, 2257, 2348, 2555, 2571, 3185, 4277
BstACI GRCGYC 1 cut(s) 3327
BstAFI CTTAAG 1 cut(s) 308
BstAPI GCANNNNNTGC 2 cut(s) 1568, 3671
BstAUI TGTACA 2 cut(s) 1608, 1624
BstBI TTCGAA 1 cut(s) 1290
BstDSI CCRYGG 2 cut(s) 2120, 2277
BstENI CCTNNNNNAGG 2 cut(s) 606, 1556
BstFNI CGCG 1 cut(s) 98
BstH2I RGCGCY 3 cut(s) 20, 635, 2312
BstHHI GCGC 4 cut(s) 19, 100, 634, 2311
BstMAI GTCTC 7 cut(s) 917, 1414, 1739, 2276, 2573, 3240, 3806
BstMCI CGRYCG 1 cut(s) 124
BstNSI RCATGY 1 cut(s) 1566
BstPAI GACNNNNGTC 1 cut(s) 1172
BstSFI CTRYAG 4 cut(s) 6, 1413, 3003, 3397
BstSLI GKGCMC 1 cut(s) 3232
BstUI CGCG 1 cut(s) 98
BstV2I GAAGAC 1 cut(s) 1476
BstX2I RGATCY 3 cut(s) 655, 1899, 3454
BstXI CCANNNNNNTGG 1 cut(s) 4104
BstYI RGATCY 3 cut(s) 655, 1899, 3454
BstZ17I GTATAC 2 cut(s) 1979, 2836
Bsu15I ATCGAT 3 cut(s) 885, 1362, 3285
Bsu36I CCTNAGG 1 cut(s) 1935
BsuI GTATCC 3 cut(s) 2732, 3103, 3625
BsuTUI ATCGAT 3 cut(s) 885, 1362, 3285
BtgI CCRYGG 2 cut(s) 2120, 2277
BtsI GCAGTG 2 cut(s) 458, 584
BtsIMutI CAGTG 8 cut(s) 458, 584, 1656, 2659, 3102, 3503, 3523, 4191
BveI ACCTGC 2 cut(s) 121, 1201
CaiI CAGNNNCTG 1 cut(s) 878
CciI TCATGA 5 cut(s) 894, 1137, 3570, 3648, 4011
CfoI GCGC 4 cut(s) 19, 100, 634, 2311
Cfr13I GGNCC 9 cut(s) 596, 1061, 1262, 1549, 2133, 2248, 3218, 3977, 4264
ClaI ATCGAT 3 cut(s) 885, 1362, 3285
CsiI ACCWGGT 1 cut(s) 815
DraI TTTAAA 1 cut(s) 1804
DriI GACNNNNNGTC 1 cut(s) 3054
EaeI YGGCCR 4 cut(s) 165, 688, 916, 1453
Eam1104I CTCTTC 7 cut(s) 2006, 2257, 2348, 2555, 2571, 3185, 4277
Eam1105I GACNNNNNGTC 1 cut(s) 3054
EarI CTCTTC 7 cut(s) 2006, 2257, 2348, 2555, 2571, 3185, 4277
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 8 cut(s) 1258, 1515, 2020, 2083, 2566, 2859, 3450, 3688
Eco147I AGGCCT 1 cut(s) 2268
Eco24I GRGCYC 2 cut(s) 156, 2505
Eco32I GATATC 1 cut(s) 4156
Eco47I GGWCC 8 cut(s) 596, 1061, 1549, 2133, 2248, 3218, 3977, 4264
Eco47III AGCGCT 2 cut(s) 18, 633
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 3 cut(s) 267, 1488, 1651
Eco81I CCTNAGG 1 cut(s) 1935
Eco88I CYCGRG 2 cut(s) 2114, 2766
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 2 cut(s) 606, 1556
EcoO109I RGGNCCY 3 cut(s) 596, 2248, 4264
EcoRI GAATTC 2 cut(s) 1283, 1866
EcoRV GATATC 1 cut(s) 4156
EcoT14I CCWWGG 8 cut(s) 1258, 1515, 2020, 2083, 2566, 2859, 3450, 3688
EcoT22I ATGCAT 3 cut(s) 433, 892, 3793
EcoT38I GRGCYC 2 cut(s) 156, 2505
ErhI CCWWGG 8 cut(s) 1258, 1515, 2020, 2083, 2566, 2859, 3450, 3688
Esp3I CGTCTC 1 cut(s) 917
FalI AAGNNNNNCTT 4 cut(s) 1550, 1582, 2657, 2689
FaqI GGGAC 4 cut(s) 609, 2442, 3963, 4031
FauI CCCGC 3 cut(s) 631, 2251, 3688
FauNDI CATATG 4 cut(s) 187, 433, 1207, 2809
FbaI TGATCA 1 cut(s) 933
FblI GTMKAC 4 cut(s) 255, 1978, 2835, 3363
FriOI GRGCYC 2 cut(s) 156, 2505
FspBI CTAG 5 cut(s) 843, 2084, 3066, 3147, 3224
GlaI GCGC 4 cut(s) 18, 99, 633, 2310
GsaI CCCAGC 1 cut(s) 3768
GsuI CTGGAG 3 cut(s) 1065, 3556, 4080
HaeII RGCGCY 3 cut(s) 20, 635, 2312
HhaI GCGC 4 cut(s) 19, 100, 634, 2311
Hin1I GRCGYC 1 cut(s) 3327
Hin6I GCGC 4 cut(s) 17, 98, 632, 2309
HinP1I GCGC 4 cut(s) 17, 98, 632, 2309
HincII GTYRAC 2 cut(s) 256, 2994
HindII GTYRAC 2 cut(s) 256, 2994
HindIII AAGCTT 2 cut(s) 503, 3484
HphI GGTGA 8 cut(s) 770, 1004, 1429, 1531, 2139, 2796, 3131, 4181
HpyCH4IV ACGT 8 cut(s) 105, 779, 796, 945, 1459, 2851, 3327, 3822
HpySE526I ACGT 8 cut(s) 105, 779, 796, 945, 1459, 2851, 3327, 3822
Hsp92I GRCGYC 1 cut(s) 3327
HspAI GCGC 4 cut(s) 17, 98, 632, 2309
Kpn2I TCCGGA 1 cut(s) 791
Ksp22I TGATCA 1 cut(s) 933
LguI GCTCTTC 1 cut(s) 2555
LmnI GCTCC 7 cut(s) 60, 151, 274, 1718, 2205, 3452, 3692
MabI ACCWGGT 1 cut(s) 815
MaeI CTAG 5 cut(s) 843, 2084, 3066, 3147, 3224
MaeII ACGT 8 cut(s) 105, 779, 796, 945, 1459, 2851, 3327, 3822
MaeIII GTNAC 9 cut(s) 676, 1036, 1165, 1348, 1595, 2812, 2847, 2866, 3299
MbiI CCGCTC 2 cut(s) 558, 3695
MfeI CAATTG 3 cut(s) 2172, 2373, 3993
MflI RGATCY 3 cut(s) 655, 1899, 3454
MhlI GDGCHC 6 cut(s) 156, 451, 2048, 2210, 2505, 3232
MlsI TGGCCA 3 cut(s) 690, 918, 1455
MluNI TGGCCA 3 cut(s) 690, 918, 1455
MlyI GAGTC 4 cut(s) 1992, 2402, 2575, 2580
Mox20I TGGCCA 3 cut(s) 690, 918, 1455
Mph1103I ATGCAT 3 cut(s) 433, 892, 3793
MroI TCCGGA 1 cut(s) 791
MroXI GAANNNNTTC 3 cut(s) 1073, 4028, 4193
MscI TGGCCA 3 cut(s) 690, 918, 1455
MslI CAYNNNNRTG 3 cut(s) 756, 3035, 3920
Msp20I TGGCCA 3 cut(s) 690, 918, 1455
MspA1I CMGCKG 4 cut(s) 2228, 2775, 3074, 3338
MspCI CTTAAG 1 cut(s) 308
MunI CAATTG 3 cut(s) 2172, 2373, 3993
Mva1269I GAATGC 2 cut(s) 890, 2941
MvnI CGCG 1 cut(s) 98
NciI CCSGG 5 cut(s) 25, 40, 56, 2955, 4238
NdeI CATATG 4 cut(s) 187, 433, 1207, 2809
NlaIV GGNNCC 8 cut(s) 597, 814, 2056, 3229, 3276, 3448, 3979, 4265
NmuCI GTSAC 4 cut(s) 676, 1165, 1348, 2866
NsiI ATGCAT 3 cut(s) 433, 892, 3793
NspI RCATGY 1 cut(s) 1566
NspV TTCGAA 1 cut(s) 1290
PaeI GCATGC 1 cut(s) 1566
PaeR7I CTCGAG 1 cut(s) 2114
PagI TCATGA 5 cut(s) 894, 1137, 3570, 3648, 4011
PaqCI CACCTGC 1 cut(s) 121
PceI AGGCCT 1 cut(s) 2268
PciSI GCTCTTC 1 cut(s) 2555
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PctI GAATGC 2 cut(s) 890, 2941
PdmI GAANNNNTTC 3 cut(s) 1073, 4028, 4193
Pfl23II CGTACG 1 cut(s) 4290
PflMI CCANNNNNTGG 1 cut(s) 4071
PfoI TCCNGGA 1 cut(s) 2953
PleI GAGTC 4 cut(s) 1992, 2402, 2575, 2580
PpsI GAGTC 4 cut(s) 1992, 2402, 2575, 2580
PpuMI RGGWCCY 3 cut(s) 596, 2248, 4264
PshAI GACNNNNGTC 1 cut(s) 1172
PshBI ATTAAT 1 cut(s) 1740
Psp124BI GAGCTC 1 cut(s) 156
Psp1406I AACGTT 1 cut(s) 779
Psp5II RGGWCCY 3 cut(s) 596, 2248, 4264
PspFI CCCAGC 1 cut(s) 3764
PspLI CGTACG 1 cut(s) 4290
PspN4I GGNNCC 8 cut(s) 597, 814, 2056, 3229, 3276, 3448, 3979, 4265
PspPI GGNCC 9 cut(s) 596, 1061, 1262, 1549, 2133, 2248, 3218, 3977, 4264
PspPPI RGGWCCY 3 cut(s) 596, 2248, 4264
PspXI VCTCGAGB 1 cut(s) 2114
PstNI CAGNNNCTG 1 cut(s) 878
PsuI RGATCY 3 cut(s) 655, 1899, 3454
PvuII CAGCTG 2 cut(s) 3074, 3338
RseI CAYNNNNRTG 3 cut(s) 756, 3035, 3920
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 254
SapI GCTCTTC 1 cut(s) 2555
Sau96I GGNCC 9 cut(s) 596, 1061, 1262, 1549, 2133, 2248, 3218, 3977, 4264
SchI GAGTC 4 cut(s) 1992, 2402, 2575, 2580
SduI GDGCHC 6 cut(s) 156, 451, 2048, 2210, 2505, 3232
SexAI ACCWGGT 1 cut(s) 815
SfcI CTRYAG 4 cut(s) 6, 1413, 3003, 3397
Sfr274I CTCGAG 1 cut(s) 2114
SfuI TTCGAA 1 cut(s) 1290
SinI GGWCC 8 cut(s) 596, 1061, 1549, 2133, 2248, 3218, 3977, 4264
SlaI CTCGAG 1 cut(s) 2114
SmiMI CAYNNNNRTG 3 cut(s) 756, 3035, 3920
SmlI CTYRAG 6 cut(s) 155, 308, 950, 2114, 2929, 4199
SmoI CTYRAG 6 cut(s) 155, 308, 950, 2114, 2929, 4199
SphI GCATGC 1 cut(s) 1566
SseBI AGGCCT 1 cut(s) 2268
SsiI CCGC 9 cut(s) 67, 120, 164, 558, 638, 2226, 2258, 2775, 3695
SspI AATATT 2 cut(s) 3254, 3378
SspMI CTAG 5 cut(s) 843, 2084, 3066, 3147, 3224
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 2268
StyI CCWWGG 8 cut(s) 1258, 1515, 2020, 2083, 2566, 2859, 3450, 3688
TaiI ACGT 8 cut(s) 108, 782, 799, 948, 1462, 2854, 3330, 3825
TatI WGTACW 4 cut(s) 1276, 1608, 1624, 3900
TauI GCSGC 4 cut(s) 167, 561, 2228, 2778
TscAI CASTG 8 cut(s) 465, 591, 1663, 2659, 3109, 3503, 3530, 4191
TseFI GTSAC 4 cut(s) 676, 1165, 1348, 2866
Tsp45I GTSAC 4 cut(s) 676, 1165, 1348, 2866
TspGWI ACGGA 4 cut(s) 1473, 1994, 2294, 3571
TspRI CASTG 8 cut(s) 465, 591, 1663, 2659, 3109, 3503, 3530, 4191
Van91I CCANNNNNTGG 1 cut(s) 4071
Vha464I CTTAAG 1 cut(s) 308
VpaK11BI GGWCC 8 cut(s) 596, 1061, 1549, 2133, 2248, 3218, 3977, 4264
VspI ATTAAT 1 cut(s) 1740
XagI CCTNNNNNAGG 2 cut(s) 606, 1556
XapI RAATTY 7 cut(s) 466, 695, 1089, 1283, 1709, 1866, 3893
XbaI TCTAGA 1 cut(s) 842
XceI RCATGY 1 cut(s) 1566
XcmI CCANNNNNNNNNTGG 3 cut(s) 1879, 2482, 3034
XhoI CTCGAG 1 cut(s) 2114
XmaJI CCTAGG 1 cut(s) 2083
XmiI GTMKAC 4 cut(s) 255, 1978, 2835, 3363
XmnI GAANNNNTTC 3 cut(s) 1073, 4028, 4193
XspI CTAG 5 cut(s) 843, 2084, 3066, 3147, 3224
ZraI GACGTC 1 cut(s) 3328
Zsp2I ATGCAT 3 cut(s) 433, 892, 3793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.