Rmu_sc0001694.1_g000022

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001694.1
Physical Location & Seq
Forward (+)
138848 .. 145193
6346 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001694.1_g000022.1.cds

Sequence Viewer

Length: 3624 bp
atggcggcggcattggccggagaagacttaatgaggcagtcgagcagcaggagcagccggagcagctggcggtcgacgagtgttcgggaaatgtggaacgcgccggacgtgttccagaggagcgggcggcagcagacggtggatgaggaggaggagctcaagtgggccgccatcgagcggttgccgacttatgataggatgaggagaggcatgttgaggaatgttatgagcaatgggagggttgtaaatgaagaagttgatgttgcgaatcttggggatcaagataagaggcagttgatggagagcatactcaaggttgttgaggatgataatgagaggttcttgcagagactcagagccagaaatgacagagttgggattgatattcctagagttgaagttagatacgagaacatatctattgagggagatgcgttcgtaggaaccagagcacttccaaccctgtggaattccaccttaaacgcactagaggctttaattggattggttggactctcaccgtcgaagaaaagagttgtcaagatacttcaagatgtgagcggtattgtgaaaccatcgaggatgacactacttcttggacctcctgcatccggaaaaacaacactgctaaaagcacttgctggcaaacttgataaagatctaagggtaaatgggaaagtaacctactgtggccatgaatttaaggaatttgttcctcagaggacctctgcttacattagtcagcatgatctgcactatggtgagatgacagttcgtgaaacattggacttctctggacgttgccttggagttggaaccaggtacgatatgctggtagagttgtctagaagggagaaagattcgggtatcaaaccagatgctgagattgatgcattcatgaaagccacatccatgtcaggccaggaaactagtttgatcacagattacgttctcaagatacttgggttagatatctgtgctgatataatggtgggagatgacatgaggagaggaatatctggtggacagaagaaacgtgtaactaccggagaaatgttggttggaccagcgaaagcatttttcatggacgaaatatcaacggggctggacagttccacgaccttccagattgtcaaattcatgaggcagatggttcatattatggatgtgacaatggtcatctctctcttgcagcctgcacctgagacatatgaccttttcgatgaaattatccttctttctgagggacagattatctaccaaggcccccgtgagaatgttcttgaattctttgagtacatgggattcaaatgcccagacagaaaaggtgttgcagattttttgcaagaagtgacctcaaagaaggatcaagaacagtactggtttaagaagaaccaaccttacagatatgtttcagtacctgattttgcacgagctttcacctctttccatgttggccaacggctcgttgaagaactaagagttccgtatgacaaaagaactgcccatccggctgccttggtgaaggaaaagtatggaatatccaatatggagctctttaaggcatgctttgcaagggaatggctgctgatgaagcgaaactcttttgtgtacatcttcaagactactcagattacaatcatggctaccattgcattgacggtattcttaagaactgaaatgaaagctgggtcagaagctgattcagcaaaattttggggggcactatttttcagtctcatcaatgtcatgtttaatggaatggcggaacttgcaatgacagtattcaggcttcctgtgtactttaaacaaaggaatgccttgttctaccctggctgggcttttggattgcctatttggctaaccagaattccaatttcattgatggaatctgcaatctggatcatctttacatactacaccattggatttgcacctgctgccagtcggtttttcaagcagttcttggctttctttggtatacatcagatggcactttcccttttccgttttattgcagcacttggaagaacagaggttgttgcaaacaccattggttcatttacattgctaatggtgttcgtccttggaggttttattgttgctaaagatgacattgagtcatggatgatatggggctactatgtttcacctatgatgtatggccaaaacgccattgctatcaatgaatttctggataaaagatggagcgctcctctcgtcaatcaaagtgaacccacagtcgggaagctacttctcaagcaaagaggcctttatactgaagaatattggtattggatttgtattggagcgctttttggcttctctcttctcttcaatgttcttttcatcgctgcactgaccttcttgaatcctcttggggatactaaaactctaattgaaactgatgactcgcaaagcaataagaagcgacgatccaatccagaaggtactgatatgcaagtgagaaatggtccagccaaaaaaggaatggttttgccattccagcccttgtcacttgcttttaaccatgtgaactactacgtggatatgcctgctgaaatgaagactcaaggggttgaagagaccagactacaactcctacgtgatattagtggtgcatttaggccaggtgttttgactgcattggttggtgtcagtggtgccggaaagactaccctaatggatgtgttagccggaagaaagacaggcgggtacattgaaggaagtattacaatctctggttacccaaagaatcaagccacatttgctagggtcagcgaaataataatagttggacttccaggagttgatgggctctcaactgagcaaagaaagaggctcaccattgctgtggaattggttgcaaatccttccatcatctttatggatgagccaacctcaggtcttgatgctagagcagccgcaattgttatgcgtactgtaagaaacacagttgatacaggacgaaccgttgtttgcacaattcaccaacctagcattgacatttttgaagcttttgatgagcttttcttaatgaaaagaggaggacaagtgacttatgctgggcctctaggtcgccaatctcacaagcttgttgaatattttgaggctattccaggggttcccaagatcaaagagggttacaatcctgctacatggatgttggaggtcagctctgctgcggttgagacccaactaaacatcgacttcgcagagatatatgcaaactcagaactctacaagagaaatcaggaccttatcaaggaactaagcacgcctcaaccagggaccaaggacctttacttccccacccggtactcccaaacctttttaactcagtgcaaggcttgcttctggaaacagcactggtcatactggaggaactcacggtacaacgccattaggtttttcatgacggtttgcattggcatattattcggtgtaatcttctggagcaaaggagaccaaatgtccgactgctccggggagtttcagcgaattccggcgactccggccaccgattggcttgcatgtgcttcgtcgcggttcctcgacgccggcgacttttttagctcttctcggcttactcctggcttcgttgcatctgtagaagaaagctga

Protein Analysis

1207

Amino Acids

136.18

Weight (kDa)

8.32

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1945
Acc36I ACCTGC 1 cut(s) 1945
AccB1I GGYRCC 1 cut(s) 2663
AccB7I CCANNNNNTGG 1 cut(s) 3525
AccBSI CCGCTC 3 cut(s) 123, 178, 561
AccI GTMKAC 2 cut(s) 74, 1981
AccII CGCG 2 cut(s) 101, 3547
AccIII TCCGGA 1 cut(s) 611
AclWI GGATC 4 cut(s) 285, 1374, 1910, 2430
AcoI YGGCCR 5 cut(s) 15, 691, 1456, 2164, 3516
AcsI RAATTY 9 cut(s) 469, 698, 707, 1136, 1286, 1712, 1869, 2189, 3501
AcuI CTGAAG 1 cut(s) 2301
AcyI GRCGYC 1 cut(s) 3558
AfeI AGCGCT 2 cut(s) 2212, 2313
AfiI CCNNNNNNNGG 9 cut(s) 177, 611, 1837, 2243, 2244, 2903, 3265, 3287, 3525
AflII CTTAAG 1 cut(s) 1669
AflIII ACRYGT 2 cut(s) 108, 1036
AhdI GACNNNNNGTC 2 cut(s) 2119, 3472
AhlI ACTAGT 1 cut(s) 929
AjiI CACGTC 1 cut(s) 109
AjnI CCWGG 8 cut(s) 818, 921, 1831, 2629, 2803, 3118, 3286, 3592
AjuI GAANNNNNNNTTGG 2 cut(s) 1044, 1076
AleI CACNNNNGTG 1 cut(s) 759
AloI GAACNNNNNNTCC 2 cut(s) 1492, 1524
Alw21I GWGCWC 3 cut(s) 159, 454, 1557
Alw26I GTCTC 6 cut(s) 343, 1199, 1742, 2579, 3185, 3459
AlwI GGATC 4 cut(s) 285, 1374, 1910, 2430
AlwNI CAGNNNCTG 3 cut(s) 881, 1421, 1700
Aor13HI TCCGGA 1 cut(s) 611
Aor51HI AGCGCT 2 cut(s) 2212, 2313
ApoI RAATTY 9 cut(s) 469, 698, 707, 1136, 1286, 1712, 1869, 2189, 3501
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 3 cut(s) 103, 2213, 2314
AsuC2I CCSGG 2 cut(s) 3316, 3487
AsuHPI GGTGA 7 cut(s) 510, 773, 1432, 1534, 2142, 2836, 2981
AvaII GGWCC 7 cut(s) 599, 723, 1064, 2474, 3256, 3291, 3298
AxyI CCTNAGG 1 cut(s) 2902
BaeGI GKGCMC 1 cut(s) 1726
BaeI ACNNNNGTAYC 2 cut(s) 950, 983
BalI TGGCCA 3 cut(s) 693, 1458, 2166
BanI GGYRCC 1 cut(s) 2663
BanII GRGCYC 3 cut(s) 159, 1557, 2820
BarI GAAGNNNNNNTAC 2 cut(s) 1776, 1808
BauI CACGAG 1 cut(s) 1431
BbsI GAAGAC 2 cut(s) 30, 2573
Bbv12I GWGCWC 3 cut(s) 159, 454, 1557
BceAI ACGGC 1 cut(s) 1478
BcgI CGANNNNNNTGC 6 cut(s) 3421, 3455, 3512, 3522, 3546, 3556
BciT130I CCWGG 8 cut(s) 820, 923, 1833, 2631, 2805, 3120, 3288, 3594
BciVI GTATCC 1 cut(s) 2377
BclI TGATCA 1 cut(s) 936
BcnI CCSGG 2 cut(s) 3316, 3487
BcoDI GTCTC 6 cut(s) 343, 1199, 1742, 2579, 3185, 3459
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 8 cut(s) 390, 488, 846, 930, 2772, 2916, 2997, 3074
BfmI CTRYAG 1 cut(s) 3609
BfoI RGCGCY 2 cut(s) 2214, 2315
BfrI CTTAAG 1 cut(s) 1669
BfuAI ACCTGC 1 cut(s) 1945
BfuI GTATCC 1 cut(s) 2377
BglI GCCNNNNNGGC 2 cut(s) 1511, 1858
BglII AGATCT 1 cut(s) 658
BmcAI AGTACT 1 cut(s) 1379
Bme18I GGWCC 7 cut(s) 599, 723, 1064, 2474, 3256, 3291, 3298
BmeRI GACNNNNNGTC 2 cut(s) 2119, 3472
BmgBI CACGTC 1 cut(s) 109
BmiI GGNNCC 7 cut(s) 445, 817, 1267, 2665, 3126, 3292, 3551
BmsI GCATC 6 cut(s) 421, 617, 868, 880, 2902, 3614
BoxI GACNNNNGTC 1 cut(s) 1175
BpiI GAAGAC 2 cut(s) 30, 2573
BplI GAGNNNNNCTC 6 cut(s) 2200, 2232, 2885, 2917, 3161, 3193
BpmI CTGGAG 2 cut(s) 3400, 3475
BpuEI CTTGAG 5 cut(s) 143, 296, 938, 2243, 2556
BpuMI CCSGG 2 cut(s) 3316, 3487
BsaAI YACGTR 2 cut(s) 2545, 2606
BsaBI GATNNNNATC 2 cut(s) 657, 1637
BsaHI GRCGYC 1 cut(s) 3558
BsaI GGTCTC 3 cut(s) 2579, 3185, 3459
BsaJI CCNNGG 9 cut(s) 805, 1261, 1518, 1831, 2086, 3119, 3287, 3294, 3486
BsaWI WCCGGW 2 cut(s) 611, 1046
BsaXI ACNNNNNCTCC 6 cut(s) 146, 176, 2583, 2613, 3039, 3069
Bsc4I CCNNNNNNNGG 9 cut(s) 177, 611, 1837, 2243, 2244, 2903, 3265, 3287, 3525
Bse118I RCCGGY 1 cut(s) 3560
Bse1I ACTGG 4 cut(s) 1385, 1944, 3374, 3383
Bse21I CCTNAGG 1 cut(s) 2902
Bse3DI GCAATG 6 cut(s) 238, 1650, 1782, 2066, 2175, 2847
Bse8I GATNNNNATC 2 cut(s) 657, 1637
BseAI TCCGGA 1 cut(s) 611
BseBI CCWGG 8 cut(s) 820, 923, 1833, 2631, 2805, 3120, 3288, 3594
BseDI CCNNGG 9 cut(s) 805, 1261, 1518, 1831, 2086, 3119, 3287, 3294, 3486
BseJI GATNNNNATC 2 cut(s) 657, 1637
BseLI CCNNNNNNNGG 9 cut(s) 177, 611, 1837, 2243, 2244, 2903, 3265, 3287, 3525
BseMI GCAATG 6 cut(s) 238, 1650, 1782, 2066, 2175, 2847
BseNI ACTGG 4 cut(s) 1385, 1944, 3374, 3383
BseRI GAGGAG 8 cut(s) 133, 161, 164, 167, 217, 1021, 2205, 3060
BseSI GKGCMC 1 cut(s) 1726
BseYI CCCAGC 3 cut(s) 1688, 1836, 3065
BsgI GTGCAG 3 cut(s) 737, 1182, 2340
Bsh1236I CGCG 2 cut(s) 101, 3547
Bsh1285I CGRYCG 1 cut(s) 74
BshNI GGYRCC 1 cut(s) 2663
BsiEI CGRYCG 1 cut(s) 74
BsiHKAI GWGCWC 3 cut(s) 159, 454, 1557
BslFI GGGAC 2 cut(s) 1260, 3304
BslI CCNNNNNNNGG 9 cut(s) 177, 611, 1837, 2243, 2244, 2903, 3265, 3287, 3525
BsmAI GTCTC 6 cut(s) 343, 1199, 1742, 2579, 3185, 3459
BsmFI GGGAC 2 cut(s) 1260, 3304
BsmI GAATGC 2 cut(s) 893, 1822
Bso31I GGTCTC 3 cut(s) 2579, 3185, 3459
Bsp1286I GDGCHC 5 cut(s) 159, 454, 1557, 1726, 2820
Bsp13I TCCGGA 1 cut(s) 611
Bsp1407I TGTACA 1 cut(s) 1611
Bsp143I GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
BspEI TCCGGA 1 cut(s) 611
BspFNI CGCG 2 cut(s) 101, 3547
BspHI TCATGA 3 cut(s) 897, 1140, 3414
BspLI GGNNCC 7 cut(s) 445, 817, 1267, 2665, 3126, 3292, 3551
BspMI ACCTGC 1 cut(s) 1945
BspPI GGATC 4 cut(s) 285, 1374, 1910, 2430
BspQI GCTCTTC 1 cut(s) 3583
BspT107I GGYRCC 1 cut(s) 2663
BspTI CTTAAG 1 cut(s) 1669
BspTNI GGTCTC 3 cut(s) 2579, 3185, 3459
BsrBI CCGCTC 3 cut(s) 123, 178, 561
BsrDI GCAATG 6 cut(s) 238, 1650, 1782, 2066, 2175, 2847
BsrFI RCCGGY 1 cut(s) 3560
BsrGI TGTACA 1 cut(s) 1611
BsrI ACTGG 4 cut(s) 1385, 1944, 3374, 3383
BssAI RCCGGY 1 cut(s) 3560
BssECI CCNNGG 9 cut(s) 805, 1261, 1518, 1831, 2086, 3119, 3287, 3294, 3486
BssMI GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
BssNAI GTATAC 1 cut(s) 1982
BssNI GRCGYC 1 cut(s) 3558
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 5 cut(s) 805, 1261, 1518, 2086, 3294
Bst1107I GTATAC 1 cut(s) 1982
Bst2BI CACGAG 1 cut(s) 1431
Bst2UI CCWGG 8 cut(s) 820, 923, 1833, 2631, 2805, 3120, 3288, 3594
Bst6I CTCTTC 4 cut(s) 2334, 2339, 2577, 3583
BstACI GRCGYC 1 cut(s) 3558
BstAFI CTTAAG 1 cut(s) 1669
BstAPI GCANNNNNTGC 4 cut(s) 751, 1571, 1940, 3351
BstAUI TGTACA 1 cut(s) 1611
BstBAI YACGTR 2 cut(s) 2545, 2606
BstEII GGTNACC 1 cut(s) 2744
BstENI CCTNNNNNAGG 2 cut(s) 3263, 3285
BstFNI CGCG 2 cut(s) 101, 3547
BstH2I RGCGCY 2 cut(s) 2214, 2315
BstHHI GCGC 3 cut(s) 103, 2213, 2314
BstKTI GATC 8 cut(s) 280, 661, 751, 939, 1369, 1905, 2438, 3135
BstMAI GTCTC 6 cut(s) 343, 1199, 1742, 2579, 3185, 3459
BstMBI GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
BstMCI CGRYCG 1 cut(s) 74
BstNI CCWGG 8 cut(s) 820, 923, 1833, 2631, 2805, 3120, 3288, 3594
BstNSI RCATGY 3 cut(s) 214, 1569, 3537
BstPAI GACNNNNGTC 1 cut(s) 1175
BstPI GGTNACC 1 cut(s) 2744
BstSFI CTRYAG 1 cut(s) 3609
BstSLI GKGCMC 1 cut(s) 1726
BstUI CGCG 2 cut(s) 101, 3547
BstV2I GAAGAC 2 cut(s) 30, 2573
BstX2I RGATCY 1 cut(s) 658
BstXI CCANNNNNNTGG 2 cut(s) 465, 2854
BstYI RGATCY 1 cut(s) 658
BstZ17I GTATAC 1 cut(s) 1982
Bsu36I CCTNAGG 1 cut(s) 2902
BsuI GTATCC 1 cut(s) 2377
BtgZI GCGATG 1 cut(s) 2335
BtrI CACGTC 1 cut(s) 109
BtsI GCAGTG 1 cut(s) 623
BtsIMutI CAGTG 5 cut(s) 623, 2357, 2665, 3347, 3367
BveI ACCTGC 1 cut(s) 1945
CaiI CAGNNNCTG 3 cut(s) 881, 1421, 1700
CciI TCATGA 3 cut(s) 897, 1140, 3414
CfoI GCGC 3 cut(s) 103, 2213, 2314
Cfr10I RCCGGY 1 cut(s) 3560
CseI GACGC 1 cut(s) 3566
CsiI ACCWGGT 1 cut(s) 818
DpnI GATC 8 cut(s) 279, 660, 750, 938, 1368, 1904, 2437, 3134
DpnII GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
DraI TTTAAA 1 cut(s) 1807
DriI GACNNNNNGTC 2 cut(s) 2119, 3472
EaeI YGGCCR 5 cut(s) 15, 691, 1456, 2164, 3516
Eam1104I CTCTTC 4 cut(s) 2334, 2339, 2577, 3583
Eam1105I GACNNNNNGTC 2 cut(s) 2119, 3472
EarI CTCTTC 4 cut(s) 2334, 2339, 2577, 3583
EciI GGCGGA 1 cut(s) 1781
Ecl136II GAGCTC 2 cut(s) 157, 1555
Eco130I CCWWGG 5 cut(s) 805, 1261, 1518, 2086, 3294
Eco147I AGGCCT 1 cut(s) 2271
Eco24I GRGCYC 3 cut(s) 159, 1557, 2820
Eco31I GGTCTC 3 cut(s) 2579, 3185, 3459
Eco32I GATATC 1 cut(s) 973
Eco47I GGWCC 7 cut(s) 599, 723, 1064, 2474, 3256, 3291, 3298
Eco47III AGCGCT 2 cut(s) 2212, 2313
Eco53kI GAGCTC 2 cut(s) 157, 1555
Eco57I CTGAAG 1 cut(s) 2301
Eco81I CCTNAGG 1 cut(s) 2902
Eco91I GGTNACC 1 cut(s) 2744
EcoICRI GAGCTC 2 cut(s) 157, 1555
EcoNI CCTNNNNNAGG 2 cut(s) 3263, 3285
EcoO109I RGGNCCY 4 cut(s) 723, 1265, 3256, 3298
EcoO65I GGTNACC 1 cut(s) 2744
EcoRI GAATTC 4 cut(s) 469, 1286, 1869, 3501
EcoRII CCWGG 8 cut(s) 818, 921, 1831, 2629, 2803, 3118, 3286, 3592
EcoRV GATATC 1 cut(s) 973
EcoT14I CCWWGG 5 cut(s) 805, 1261, 1518, 2086, 3294
EcoT22I ATGCAT 1 cut(s) 895
EcoT38I GRGCYC 3 cut(s) 159, 1557, 2820
ErhI CCWWGG 5 cut(s) 805, 1261, 1518, 2086, 3294
FalI AAGNNNNNCTT 6 cut(s) 1553, 1585, 1949, 1981, 3338, 3370
FaqI GGGAC 2 cut(s) 1260, 3304
FauI CCCGC 2 cut(s) 116, 2705
FauNDI CATATG 1 cut(s) 1210
FbaI TGATCA 1 cut(s) 936
FblI GTMKAC 2 cut(s) 74, 1981
FriOI GRGCYC 3 cut(s) 159, 1557, 2820
FspBI CTAG 8 cut(s) 390, 488, 846, 930, 2772, 2916, 2997, 3074
GlaI GCGC 3 cut(s) 102, 2212, 2313
GsaI CCCAGC 3 cut(s) 1692, 1840, 3069
GsuI CTGGAG 2 cut(s) 3400, 3475
HaeII RGCGCY 2 cut(s) 2214, 2315
HgaI GACGC 1 cut(s) 3566
HhaI GCGC 3 cut(s) 103, 2213, 2314
Hin1I GRCGYC 1 cut(s) 3558
Hin6I GCGC 3 cut(s) 101, 2211, 2312
HinP1I GCGC 3 cut(s) 101, 2211, 2312
HincII GTYRAC 1 cut(s) 75
HindII GTYRAC 1 cut(s) 75
HindIII AAGCTT 2 cut(s) 3015, 3092
HphI GGTGA 7 cut(s) 510, 773, 1432, 1534, 2142, 2836, 2981
Hpy166II GTNNAC 7 cut(s) 75, 1025, 1612, 1801, 1982, 2234, 2536
Hpy188I TCNGA 8 cut(s) 356, 720, 1243, 1632, 1696, 1989, 3235, 3478
Hpy8I GTNNAC 7 cut(s) 75, 1025, 1612, 1801, 1982, 2234, 2536
Hpy99I CGWCG 5 cut(s) 79, 526, 2436, 3547, 3560
HpyAV CCTTC 9 cut(s) 843, 1132, 1244, 1357, 1519, 2374, 2441, 2717, 2883
HpyCH4IV ACGT 6 cut(s) 108, 799, 948, 1036, 2544, 2605
HpySE526I ACGT 6 cut(s) 108, 799, 948, 1036, 2544, 2605
Hsp92I GRCGYC 1 cut(s) 3558
HspAI GCGC 3 cut(s) 101, 2211, 2312
Kpn2I TCCGGA 1 cut(s) 611
KroI GCCGGC 1 cut(s) 3560
KroNI GCCGGC 1 cut(s) 3562
Ksp22I TGATCA 1 cut(s) 936
Kzo9I GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
LguI GCTCTTC 1 cut(s) 3583
LweI GCATC 6 cut(s) 421, 617, 868, 880, 2902, 3614
MabI ACCWGGT 1 cut(s) 818
MaeI CTAG 8 cut(s) 390, 488, 846, 930, 2772, 2916, 2997, 3074
MaeII ACGT 6 cut(s) 108, 799, 948, 1036, 2544, 2605
MaeIII GTNAC 8 cut(s) 679, 1039, 1168, 1351, 2514, 2744, 3055, 3143
MalI GATC 8 cut(s) 279, 660, 750, 938, 1368, 1904, 2437, 3134
MbiI CCGCTC 3 cut(s) 123, 178, 561
MboI GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
MfeI CAATTG 1 cut(s) 2928
MflI RGATCY 1 cut(s) 658
MhlI GDGCHC 5 cut(s) 159, 454, 1557, 1726, 2820
MlsI TGGCCA 3 cut(s) 693, 1458, 2166
MluNI TGGCCA 3 cut(s) 693, 1458, 2166
MlyI GAGTC 6 cut(s) 345, 507, 2129, 2405, 2563, 3505
MmeI TCCRAC 7 cut(s) 482, 490, 793, 1042, 2776, 3147, 3501
Mox20I TGGCCA 3 cut(s) 693, 1458, 2166
Mph1103I ATGCAT 1 cut(s) 895
MreI CGCCGGCG 1 cut(s) 3560
MroI TCCGGA 1 cut(s) 611
MroNI GCCGGC 1 cut(s) 3560
MroXI GAANNNNTTC 1 cut(s) 711
MscI TGGCCA 3 cut(s) 693, 1458, 2166
MslI CAYNNNNRTG 4 cut(s) 759, 911, 2852, 2885
Msp20I TGGCCA 3 cut(s) 693, 1458, 2166
MspA1I CMGCKG 1 cut(s) 66
MspCI CTTAAG 1 cut(s) 1669
MunI CAATTG 1 cut(s) 2928
Mva1269I GAATGC 2 cut(s) 893, 1822
MvaI CCWGG 8 cut(s) 820, 923, 1833, 2631, 2805, 3120, 3288, 3594
MvnI CGCG 2 cut(s) 101, 3547
NaeI GCCGGC 1 cut(s) 3562
NciI CCSGG 2 cut(s) 3316, 3487
NdeI CATATG 1 cut(s) 1210
NdeII GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
NgoMIV GCCGGC 1 cut(s) 3560
NlaIV GGNNCC 7 cut(s) 445, 817, 1267, 2665, 3126, 3292, 3551
NmeAIII GCCGAG 1 cut(s) 3562
NmuCI GTSAC 4 cut(s) 1168, 1351, 2514, 3055
NsiI ATGCAT 1 cut(s) 895
NspI RCATGY 3 cut(s) 214, 1569, 3537
OliI CACNNNNGTG 1 cut(s) 759
PaeI GCATGC 1 cut(s) 1569
PagI TCATGA 3 cut(s) 897, 1140, 3414
PaqCI CACCTGC 1 cut(s) 1945
PceI AGGCCT 1 cut(s) 2271
PciSI GCTCTTC 1 cut(s) 3583
PcsI WCGNNNNNNNCGW 2 cut(s) 105, 3561
PctI GAATGC 2 cut(s) 893, 1822
PdiI GCCGGC 1 cut(s) 3562
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 7 cut(s) 268, 860, 1305, 1703, 1889, 2371, 2755
PflMI CCANNNNNTGG 1 cut(s) 3525
PfoI TCCNGGA 1 cut(s) 2803
PleI GAGTC 6 cut(s) 345, 507, 2128, 2405, 2563, 3505
PpsI GAGTC 6 cut(s) 345, 507, 2128, 2405, 2563, 3505
Ppu21I YACGTR 2 cut(s) 2545, 2606
PpuMI RGGWCCY 3 cut(s) 723, 3256, 3298
PshAI GACNNNNGTC 1 cut(s) 1175
Psp124BI GAGCTC 2 cut(s) 159, 1557
Psp5II RGGWCCY 3 cut(s) 723, 3256, 3298
Psp6I CCWGG 8 cut(s) 818, 921, 1831, 2629, 2803, 3118, 3286, 3592
PspEI GGTNACC 1 cut(s) 2744
PspFI CCCAGC 3 cut(s) 1688, 1836, 3065
PspGI CCWGG 8 cut(s) 818, 921, 1831, 2629, 2803, 3118, 3286, 3592
PspN4I GGNNCC 7 cut(s) 445, 817, 1267, 2665, 3126, 3292, 3551
PspPPI RGGWCCY 3 cut(s) 723, 3256, 3298
PsrI GAACNNNNNNTAC 4 cut(s) 1385, 1417, 3377, 3409
PstNI CAGNNNCTG 3 cut(s) 881, 1421, 1700
PsuI RGATCY 1 cut(s) 658
PvuII CAGCTG 1 cut(s) 66
RseI CAYNNNNRTG 4 cut(s) 759, 911, 2852, 2885
SacI GAGCTC 2 cut(s) 159, 1557
SalI GTCGAC 1 cut(s) 73
SapI GCTCTTC 1 cut(s) 3583
Sau3AI GATC 8 cut(s) 277, 658, 748, 936, 1366, 1902, 2435, 3132
ScaI AGTACT 1 cut(s) 1379
SchI GAGTC 6 cut(s) 345, 507, 2129, 2405, 2563, 3505
SduI GDGCHC 5 cut(s) 159, 454, 1557, 1726, 2820
SexAI ACCWGGT 1 cut(s) 818
SfaNI GCATC 6 cut(s) 421, 617, 868, 880, 2902, 3614
SfcI CTRYAG 1 cut(s) 3609
SgrAI CRCCGGYG 1 cut(s) 3560
SinI GGWCC 7 cut(s) 599, 723, 1064, 2474, 3256, 3291, 3298
SmiMI CAYNNNNRTG 4 cut(s) 759, 911, 2852, 2885
SmlI CTYRAG 6 cut(s) 158, 311, 953, 1669, 2258, 2571
SmoI CTYRAG 6 cut(s) 158, 311, 953, 1669, 2258, 2571
SpeI ACTAGT 1 cut(s) 929
SphI GCATGC 1 cut(s) 1569
SseBI AGGCCT 1 cut(s) 2271
SspI AATATT 2 cut(s) 2288, 3104
SspMI CTAG 8 cut(s) 390, 488, 846, 930, 2772, 2916, 2997, 3074
SstI GAGCTC 2 cut(s) 159, 1557
StuI AGGCCT 1 cut(s) 2271
StyI CCWWGG 5 cut(s) 805, 1261, 1518, 2086, 3294
TaiI ACGT 6 cut(s) 111, 802, 951, 1039, 2547, 2608
TaqI TCGA 8 cut(s) 41, 74, 174, 524, 578, 1221, 3207, 3555
TatI WGTACW 4 cut(s) 1296, 1377, 1611, 1800
TauI GCSGC 5 cut(s) 8, 11, 130, 170, 2927
TfiI GAWTC 7 cut(s) 268, 860, 1305, 1703, 1889, 2371, 2755
TscAI CASTG 5 cut(s) 630, 2364, 2665, 3347, 3374
TseFI GTSAC 4 cut(s) 1168, 1351, 2514, 3055
Tsp45I GTSAC 4 cut(s) 1168, 1351, 2514, 3055
TspGWI ACGGA 2 cut(s) 1476, 1997
TspRI CASTG 5 cut(s) 630, 2364, 2665, 3347, 3374
Van91I CCANNNNNTGG 1 cut(s) 3525
Vha464I CTTAAG 1 cut(s) 1669
VpaK11BI GGWCC 7 cut(s) 599, 723, 1064, 2474, 3256, 3291, 3298
XagI CCTNNNNNAGG 2 cut(s) 3263, 3285
XapI RAATTY 9 cut(s) 469, 698, 707, 1136, 1286, 1712, 1869, 2189, 3501
XbaI TCTAGA 1 cut(s) 845
XceI RCATGY 3 cut(s) 214, 1569, 3537
XcmI CCANNNNNNNNNTGG 2 cut(s) 2488, 2884
XmiI GTMKAC 2 cut(s) 74, 1981
XmnI GAANNNNTTC 1 cut(s) 711
XspI CTAG 8 cut(s) 390, 488, 846, 930, 2772, 2916, 2997, 3074
ZrmI AGTACT 1 cut(s) 1379
Zsp2I ATGCAT 1 cut(s) 895
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.