DNA-binding domain in plant proteins such as APETALA2 and EREBPs
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 631, 981 |
| AccBSI | CCGCTC | 2 cut(s) | 833, 1016 |
| AccI | GTMKAC | 1 cut(s) | 906 |
| AccII | CGCG | 2 cut(s) | 912, 1284 |
| AciI | CCGC | 9 cut(s) | 833, 910, 912, 1014, 1034, 1083, 1137, 1140, 1179 |
| AcoI | YGGCCR | 1 cut(s) | 1011 |
| AcsI | RAATTY | 4 cut(s) | 16, 759, 978, 1172 |
| AcuI | CTGAAG | 1 cut(s) | 650 |
| AdeI | CACNNNGTG | 1 cut(s) | 1030 |
| AfaI | GTAC | 4 cut(s) | 261, 737, 995, 1313 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 364, 631, 981, 1050 |
| AflII | CTTAAG | 1 cut(s) | 1357 |
| AflIII | ACRYGT | 1 cut(s) | 294 |
| AgsI | TTSAA | 4 cut(s) | 16, 76, 487, 886 |
| AjnI | CCWGG | 1 cut(s) | 554 |
| AluBI | AGCT | 8 cut(s) | 67, 102, 508, 587, 845, 1120, 1194, 1379 |
| AluI | AGCT | 8 cut(s) | 67, 102, 508, 587, 845, 1120, 1194, 1379 |
| Alw21I | GWGCWC | 1 cut(s) | 104 |
| Alw26I | GTCTC | 2 cut(s) | 884, 1148 |
| Ama87I | CYCGRG | 2 cut(s) | 986, 1017 |
| AoxI | GGCC | 6 cut(s) | 205, 746, 854, 1011, 1041, 1134 |
| ApeKI | GCWGC | 6 cut(s) | 151, 431, 754, 1148, 1191, 1194 |
| ApoI | RAATTY | 4 cut(s) | 16, 759, 978, 1172 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 373, 442 |
| AspLEI | GCGC | 3 cut(s) | 924, 1092, 1330 |
| AspS9I | GGNCC | 3 cut(s) | 746, 1042, 1134 |
| AsuC2I | CCSGG | 1 cut(s) | 902 |
| AsuHPI | GGTGA | 3 cut(s) | 232, 807, 847 |
| AvaI | CYCGRG | 2 cut(s) | 986, 1017 |
| AxyI | CCTNAGG | 2 cut(s) | 1046, 1167 |
| BaeGI | GKGCMC | 1 cut(s) | 1024 |
| BanII | GRGCYC | 1 cut(s) | 104 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 719, 751 |
| BauI | CACGAG | 1 cut(s) | 793 |
| BbsI | GAAGAC | 1 cut(s) | 83 |
| Bbv12I | GWGCWC | 1 cut(s) | 104 |
| BbvI | GCAGC | 6 cut(s) | 163, 443, 766, 1135, 1181, 1203 |
| BccI | CCATC | 6 cut(s) | 29, 236, 563, 1003, 1231, 1356 |
| BceAI | ACGGC | 3 cut(s) | 795, 1276, 1321 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 743, 777 |
| BciT130I | CCWGG | 1 cut(s) | 556 |
| BclI | TGATCA | 1 cut(s) | 55 |
| BcnI | CCSGG | 1 cut(s) | 902 |
| BcoDI | GTCTC | 2 cut(s) | 884, 1148 |
| BfaI | CTAG | 3 cut(s) | 807, 842, 849 |
| BfoI | RGCGCY | 2 cut(s) | 1093, 1331 |
| BfrI | CTTAAG | 1 cut(s) | 1357 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1019, 1145 |
| Bme1390I | CCNGG | 2 cut(s) | 556, 902 |
| BmeT110I | CYCGRG | 2 cut(s) | 986, 1017 |
| BmgT120I | GGNCC | 3 cut(s) | 746, 1042, 1134 |
| BmiI | GGNNCC | 1 cut(s) | 960 |
| BmrFI | CCNGG | 2 cut(s) | 556, 902 |
| BmsI | GCATC | 1 cut(s) | 807 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1371 |
| BpiI | GAAGAC | 1 cut(s) | 83 |
| BpmI | CTGGAG | 1 cut(s) | 662 |
| BpuEI | CTTGAG | 1 cut(s) | 530 |
| BpuMI | CCSGG | 1 cut(s) | 902 |
| BsaAI | YACGTR | 1 cut(s) | 194 |
| BsaJI | CCNNGG | 4 cut(s) | 202, 358, 910, 1143 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 529, 559 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 364, 631, 981, 1050 |
| Bse118I | RCCGGY | 1 cut(s) | 869 |
| Bse1I | ACTGG | 1 cut(s) | 645 |
| Bse21I | CCTNAGG | 2 cut(s) | 1046, 1167 |
| Bse3DI | GCAATG | 1 cut(s) | 229 |
| BseBI | CCWGG | 1 cut(s) | 556 |
| BseDI | CCNNGG | 4 cut(s) | 202, 358, 910, 1143 |
| BseGI | GGATG | 1 cut(s) | 1324 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 364, 631, 981, 1050 |
| BseMI | GCAATG | 1 cut(s) | 229 |
| BseMII | CTCAG | 3 cut(s) | 482, 1143, 1158 |
| BseNI | ACTGG | 1 cut(s) | 645 |
| BseRI | GAGGAG | 1 cut(s) | 1286 |
| BseSI | GKGCMC | 1 cut(s) | 1024 |
| BseXI | GCAGC | 6 cut(s) | 163, 443, 766, 1135, 1181, 1203 |
| BseYI | CCCAGC | 3 cut(s) | 559, 772, 1131 |
| BsgI | GTGCAG | 2 cut(s) | 567, 722 |
| Bsh1236I | CGCG | 2 cut(s) | 912, 1284 |
| BshFI | GGCC | 6 cut(s) | 207, 748, 856, 1013, 1043, 1136 |
| BsiHKAI | GWGCWC | 1 cut(s) | 104 |
| BsiHKCI | CYCGRG | 2 cut(s) | 986, 1017 |
| BsiSI | CCGG | 3 cut(s) | 870, 902, 1103 |
| BslFI | GGGAC | 2 cut(s) | 1003, 1379 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 364, 631, 981, 1050 |
| BsmAI | GTCTC | 2 cut(s) | 884, 1148 |
| BsmFI | GGGAC | 2 cut(s) | 1003, 1379 |
| BsnI | GGCC | 6 cut(s) | 207, 748, 856, 1013, 1043, 1136 |
| BsoBI | CYCGRG | 2 cut(s) | 986, 1017 |
| Bsp1286I | GDGCHC | 2 cut(s) | 104, 1024 |
| Bsp143I | GATC | 3 cut(s) | 55, 539, 674 |
| BspACI | CCGC | 9 cut(s) | 833, 910, 912, 1014, 1034, 1083, 1137, 1140, 1179 |
| BspANI | GGCC | 6 cut(s) | 207, 748, 856, 1013, 1043, 1136 |
| BspCNI | CTCAG | 3 cut(s) | 481, 1144, 1159 |
| BspFNI | CGCG | 2 cut(s) | 912, 1284 |
| BspHI | TCATGA | 1 cut(s) | 52 |
| BspLI | GGNNCC | 1 cut(s) | 960 |
| BspQI | GCTCTTC | 1 cut(s) | 1337 |
| BspTI | CTTAAG | 1 cut(s) | 1357 |
| BsrBI | CCGCTC | 2 cut(s) | 833, 1016 |
| BsrDI | GCAATG | 1 cut(s) | 229 |
| BsrFI | RCCGGY | 1 cut(s) | 869 |
| BsrI | ACTGG | 1 cut(s) | 645 |
| BssAI | RCCGGY | 1 cut(s) | 869 |
| BssECI | CCNNGG | 4 cut(s) | 202, 358, 910, 1143 |
| BssMI | GATC | 3 cut(s) | 55, 539, 674 |
| BssSI | CACGAG | 1 cut(s) | 793 |
| BssT1I | CCWWGG | 2 cut(s) | 202, 358 |
| Bst2BI | CACGAG | 1 cut(s) | 793 |
| Bst2UI | CCWGG | 1 cut(s) | 556 |
| Bst4CI | ACNGT | 3 cut(s) | 412, 740, 1003 |
| Bst6I | CTCTTC | 2 cut(s) | 1317, 1337 |
| BstAFI | CTTAAG | 1 cut(s) | 1357 |
| BstBAI | YACGTR | 1 cut(s) | 194 |
| BstC8I | GCNNGC | 6 cut(s) | 854, 867, 1059, 1063, 1094, 1381 |
| BstDEI | CTNAG | 5 cut(s) | 9, 468, 1046, 1152, 1167 |
| BstDSI | CCRYGG | 1 cut(s) | 910 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 362 |
| BstF5I | GGATG | 1 cut(s) | 1324 |
| BstFNI | CGCG | 2 cut(s) | 912, 1284 |
| BstH2I | RGCGCY | 2 cut(s) | 1093, 1331 |
| BstHHI | GCGC | 3 cut(s) | 924, 1092, 1330 |
| BstKTI | GATC | 3 cut(s) | 58, 542, 677 |
| BstMAI | GTCTC | 2 cut(s) | 884, 1148 |
| BstMBI | GATC | 3 cut(s) | 55, 539, 674 |
| BstNI | CCWGG | 1 cut(s) | 556 |
| BstNSI | RCATGY | 2 cut(s) | 1065, 1342 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1371 |
| BstSCI | CCNGG | 2 cut(s) | 554, 900 |
| BstSLI | GKGCMC | 1 cut(s) | 1024 |
| BstUI | CGCG | 2 cut(s) | 912, 1284 |
| BstV1I | GCAGC | 6 cut(s) | 163, 443, 766, 1135, 1181, 1203 |
| BstV2I | GAAGAC | 1 cut(s) | 83 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1046, 1167 |
| BsuRI | GGCC | 6 cut(s) | 207, 748, 856, 1013, 1043, 1136 |
| BtgI | CCRYGG | 1 cut(s) | 910 |
| BtsCI | GGATG | 1 cut(s) | 1324 |
| BtsI | GCAGTG | 1 cut(s) | 555 |
| BtsIMutI | CAGTG | 2 cut(s) | 476, 555 |
| Cac8I | GCNNGC | 6 cut(s) | 854, 867, 1059, 1063, 1094, 1381 |
| CciI | TCATGA | 1 cut(s) | 52 |
| CfoI | GCGC | 3 cut(s) | 924, 1092, 1330 |
| Cfr10I | RCCGGY | 1 cut(s) | 869 |
| Cfr13I | GGNCC | 3 cut(s) | 746, 1042, 1134 |
| Cfr42I | CCGCGG | 1 cut(s) | 913 |
| Csp6I | GTAC | 4 cut(s) | 260, 736, 994, 1312 |
| CviAII | CATG | 6 cut(s) | 53, 543, 626, 1062, 1217, 1339 |
| CviQI | GTAC | 4 cut(s) | 260, 736, 994, 1312 |
| DdeI | CTNAG | 5 cut(s) | 9, 468, 1046, 1152, 1167 |
| DpnI | GATC | 3 cut(s) | 57, 541, 676 |
| DpnII | GATC | 3 cut(s) | 55, 539, 674 |
| DraIII | CACNNNGTG | 1 cut(s) | 1030 |
| EaeI | YGGCCR | 1 cut(s) | 1011 |
| Eam1104I | CTCTTC | 2 cut(s) | 1317, 1337 |
| EarI | CTCTTC | 2 cut(s) | 1317, 1337 |
| Ecl136II | GAGCTC | 1 cut(s) | 102 |
| Eco130I | CCWWGG | 2 cut(s) | 202, 358 |
| Eco24I | GRGCYC | 1 cut(s) | 104 |
| Eco53kI | GAGCTC | 1 cut(s) | 102 |
| Eco57I | CTGAAG | 1 cut(s) | 650 |
| Eco81I | CCTNAGG | 2 cut(s) | 1046, 1167 |
| Eco88I | CYCGRG | 2 cut(s) | 986, 1017 |
| EcoICRI | GAGCTC | 1 cut(s) | 102 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 362 |
| EcoRI | GAATTC | 2 cut(s) | 759, 1172 |
| EcoRII | CCWGG | 1 cut(s) | 554 |
| EcoT14I | CCWWGG | 2 cut(s) | 202, 358 |
| EcoT22I | ATGCAT | 1 cut(s) | 463 |
| EcoT38I | GRGCYC | 1 cut(s) | 104 |
| ErhI | CCWWGG | 2 cut(s) | 202, 358 |
| FaeI | CATG | 6 cut(s) | 56, 546, 629, 1065, 1220, 1342 |
| FaqI | GGGAC | 2 cut(s) | 1003, 1379 |
| FatI | CATG | 6 cut(s) | 52, 542, 625, 1061, 1216, 1338 |
| FbaI | TGATCA | 1 cut(s) | 55 |
| FblI | GTMKAC | 1 cut(s) | 906 |
| FokI | GGATG | 1 cut(s) | 1331 |
| FriOI | GRGCYC | 1 cut(s) | 104 |
| FspBI | CTAG | 3 cut(s) | 807, 842, 849 |
| GlaI | GCGC | 3 cut(s) | 923, 1091, 1329 |
| GsaI | CCCAGC | 3 cut(s) | 563, 776, 1135 |
| GsuI | CTGGAG | 1 cut(s) | 662 |
| HaeII | RGCGCY | 2 cut(s) | 1093, 1331 |
| HaeIII | GGCC | 6 cut(s) | 207, 748, 856, 1013, 1043, 1136 |
| HapII | CCGG | 3 cut(s) | 870, 902, 1103 |
| HhaI | GCGC | 3 cut(s) | 924, 1092, 1330 |
| Hin1II | CATG | 6 cut(s) | 56, 546, 629, 1065, 1220, 1342 |
| Hin6I | GCGC | 3 cut(s) | 922, 1090, 1328 |
| HinP1I | GCGC | 3 cut(s) | 922, 1090, 1328 |
| HincII | GTYRAC | 1 cut(s) | 322 |
| HindII | GTYRAC | 1 cut(s) | 322 |
| HindIII | AAGCTT | 1 cut(s) | 506 |
| HinfI | GANTC | 2 cut(s) | 892, 1079 |
| HpaI | GTTAAC | 1 cut(s) | 322 |
| HpaII | CCGG | 3 cut(s) | 870, 902, 1103 |
| HphI | GGTGA | 3 cut(s) | 232, 807, 847 |
| Hpy166II | GTNNAC | 3 cut(s) | 322, 815, 907 |
| Hpy188I | TCNGA | 6 cut(s) | 10, 137, 448, 765, 790, 826 |
| Hpy188III | TCNNGA | 5 cut(s) | 53, 280, 422, 802, 988 |
| Hpy8I | GTNNAC | 3 cut(s) | 322, 815, 907 |
| Hpy99I | CGWCG | 3 cut(s) | 830, 1202, 1307 |
| HpyAV | CCTTC | 3 cut(s) | 40, 335, 721 |
| HpyCH4III | ACNGT | 3 cut(s) | 412, 740, 1003 |
| HpyCH4IV | ACGT | 5 cut(s) | 193, 218, 294, 607, 992 |
| HpyCH4V | TGCA | 9 cut(s) | 28, 197, 222, 385, 461, 548, 703, 754, 1351 |
| HpyF3I | CTNAG | 5 cut(s) | 9, 468, 1046, 1152, 1167 |
| HpySE526I | ACGT | 5 cut(s) | 193, 218, 294, 607, 992 |
| Hsp92II | CATG | 6 cut(s) | 56, 546, 629, 1065, 1220, 1342 |
| HspAI | GCGC | 3 cut(s) | 922, 1090, 1328 |
| Ksp22I | TGATCA | 1 cut(s) | 55 |
| KspAI | GTTAAC | 1 cut(s) | 322 |
| KspI | CCGCGG | 1 cut(s) | 913 |
| Kzo9I | GATC | 3 cut(s) | 55, 539, 674 |
| LguI | GCTCTTC | 1 cut(s) | 1337 |
| LmnI | GCTCC | 3 cut(s) | 332, 830, 958 |
| Lsp1109I | GCAGC | 6 cut(s) | 163, 443, 766, 1135, 1181, 1203 |
| LweI | GCATC | 1 cut(s) | 807 |
| MaeI | CTAG | 3 cut(s) | 807, 842, 849 |
| MaeII | ACGT | 5 cut(s) | 193, 218, 294, 607, 992 |
| MaeIII | GTNAC | 1 cut(s) | 550 |
| MalI | GATC | 3 cut(s) | 57, 541, 676 |
| MbiI | CCGCTC | 2 cut(s) | 833, 1016 |
| MboI | GATC | 3 cut(s) | 55, 539, 674 |
| MhlI | GDGCHC | 2 cut(s) | 104, 1024 |
| MluCI | AATT | 7 cut(s) | 16, 648, 759, 782, 978, 1069, 1172 |
| MlyI | GAGTC | 1 cut(s) | 886 |
| MmeI | TCCRAC | 1 cut(s) | 849 |
| Mph1103I | ATGCAT | 1 cut(s) | 463 |
| MroXI | GAANNNNTTC | 2 cut(s) | 373, 442 |
| MseI | TTAA | 3 cut(s) | 321, 1358, 1387 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1221 |
| MspA1I | CMGCKG | 2 cut(s) | 912, 1194 |
| MspCI | CTTAAG | 1 cut(s) | 1357 |
| MspI | CCGG | 3 cut(s) | 870, 902, 1103 |
| MspR9I | CCNGG | 2 cut(s) | 556, 902 |
| MvaI | CCWGG | 1 cut(s) | 556 |
| MvnI | CGCG | 2 cut(s) | 912, 1284 |
| NciI | CCSGG | 1 cut(s) | 902 |
| NdeII | GATC | 3 cut(s) | 55, 539, 674 |
| NlaIII | CATG | 6 cut(s) | 56, 546, 629, 1065, 1220, 1342 |
| NlaIV | GGNNCC | 1 cut(s) | 960 |
| NmeAIII | GCCGAG | 1 cut(s) | 1168 |
| NmuCI | GTSAC | 1 cut(s) | 550 |
| NsiI | ATGCAT | 1 cut(s) | 463 |
| NspI | RCATGY | 2 cut(s) | 1065, 1342 |
| PaeI | GCATGC | 1 cut(s) | 1065 |
| PagI | TCATGA | 1 cut(s) | 52 |
| PciSI | GCTCTTC | 1 cut(s) | 1337 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 800, 1266, 1311 |
| PdmI | GAANNNNTTC | 2 cut(s) | 373, 442 |
| PfeI | GAWTC | 1 cut(s) | 1079 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 631, 981 |
| PleI | GAGTC | 1 cut(s) | 886 |
| PpsI | GAGTC | 1 cut(s) | 886 |
| Ppu21I | YACGTR | 1 cut(s) | 194 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1371 |
| Psp124BI | GAGCTC | 1 cut(s) | 104 |
| Psp6I | CCWGG | 1 cut(s) | 554 |
| PspFI | CCCAGC | 3 cut(s) | 559, 772, 1131 |
| PspGI | CCWGG | 1 cut(s) | 554 |
| PspN4I | GGNNCC | 1 cut(s) | 960 |
| PspPI | GGNCC | 3 cut(s) | 746, 1042, 1134 |
| PvuII | CAGCTG | 1 cut(s) | 1194 |
| RsaI | GTAC | 4 cut(s) | 261, 737, 995, 1313 |
| RsaNI | GTAC | 4 cut(s) | 260, 736, 994, 1312 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1221 |
| SacI | GAGCTC | 1 cut(s) | 104 |
| SacII | CCGCGG | 1 cut(s) | 913 |
| SapI | GCTCTTC | 1 cut(s) | 1337 |
| SaqAI | TTAA | 3 cut(s) | 321, 1358, 1387 |
| Sau3AI | GATC | 3 cut(s) | 55, 539, 674 |
| Sau96I | GGNCC | 3 cut(s) | 746, 1042, 1134 |
| SchI | GAGTC | 1 cut(s) | 886 |
| ScrFI | CCNGG | 2 cut(s) | 556, 902 |
| SduI | GDGCHC | 2 cut(s) | 104, 1024 |
| SfaNI | GCATC | 1 cut(s) | 807 |
| Sfr303I | CCGCGG | 1 cut(s) | 913 |
| SgrBI | CCGCGG | 1 cut(s) | 913 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1221 |
| SmlI | CTYRAG | 2 cut(s) | 509, 1357 |
| SmoI | CTYRAG | 2 cut(s) | 509, 1357 |
| SphI | GCATGC | 1 cut(s) | 1065 |
| Sse9I | AATT | 7 cut(s) | 16, 648, 759, 782, 978, 1069, 1172 |
| SsiI | CCGC | 9 cut(s) | 833, 910, 912, 1014, 1034, 1083, 1137, 1140, 1179 |
| SspI | AATATT | 2 cut(s) | 91, 720 |
| SspMI | CTAG | 3 cut(s) | 807, 842, 849 |
| SstI | GAGCTC | 1 cut(s) | 104 |
| StyD4I | CCNGG | 2 cut(s) | 554, 900 |
| StyI | CCWWGG | 2 cut(s) | 202, 358 |
| TaaI | ACNGT | 3 cut(s) | 412, 740, 1003 |
| TaiI | ACGT | 5 cut(s) | 196, 221, 297, 610, 995 |
| TaqI | TCGA | 4 cut(s) | 421, 1122, 1162, 1335 |
| TasI | AATT | 7 cut(s) | 16, 648, 759, 782, 978, 1069, 1172 |
| TatI | WGTACW | 1 cut(s) | 735 |
| TauI | GCSGC | 6 cut(s) | 915, 1016, 1037, 1139, 1142, 1182 |
| TfiI | GAWTC | 1 cut(s) | 1079 |
| Tru1I | TTAA | 3 cut(s) | 321, 1358, 1387 |
| Tru9I | TTAA | 3 cut(s) | 321, 1358, 1387 |
| TscAI | CASTG | 2 cut(s) | 476, 555 |
| TseFI | GTSAC | 1 cut(s) | 550 |
| TseI | GCWGC | 6 cut(s) | 151, 431, 754, 1148, 1191, 1194 |
| Tsp45I | GTSAC | 1 cut(s) | 550 |
| TspDTI | ATGAA | 3 cut(s) | 41, 132, 1335 |
| TspGWI | ACGGA | 1 cut(s) | 843 |
| TspRI | CASTG | 2 cut(s) | 476, 555 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 631, 981 |
| Vha464I | CTTAAG | 1 cut(s) | 1357 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 362 |
| XapI | RAATTY | 4 cut(s) | 16, 759, 978, 1172 |
| XceI | RCATGY | 2 cut(s) | 1065, 1342 |
| XmiI | GTMKAC | 1 cut(s) | 906 |
| XmnI | GAANNNNTTC | 2 cut(s) | 373, 442 |
| XspI | CTAG | 3 cut(s) | 807, 842, 849 |
| Zsp2I | ATGCAT | 1 cut(s) | 463 |