Pleiotropic drug resistance protein 2-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1441 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2736 |
| AatII | GACGTC | 1 cut(s) | 3651 |
| Acc36I | ACCTGC | 1 cut(s) | 1441 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3576 |
| AccI | GTMKAC | 2 cut(s) | 753, 1107 |
| AccII | CGCG | 1 cut(s) | 766 |
| AccIII | TCCGGA | 2 cut(s) | 107, 290 |
| AclI | AACGTT | 1 cut(s) | 278 |
| AclWI | GGATC | 4 cut(s) | 162, 1406, 3205, 3702 |
| AcoI | YGGCCR | 2 cut(s) | 187, 952 |
| AcsI | RAATTY | 6 cut(s) | 194, 203, 782, 1208, 1365, 1685 |
| AcuI | CTGAAG | 2 cut(s) | 1456, 1797 |
| AcyI | GRCGYC | 2 cut(s) | 3624, 3648 |
| AfeI | AGCGCT | 2 cut(s) | 1708, 1809 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 39, 107, 1333, 1739, 1877, 2564, 2948, 3576 |
| AflII | CTTAAG | 1 cut(s) | 1165 |
| AflIII | ACRYGT | 1 cut(s) | 532 |
| AhlI | ACTAGT | 2 cut(s) | 425, 2213 |
| AjiI | CACGTC | 1 cut(s) | 6 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 540, 572 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1304, 1336 |
| Alw21I | GWGCWC | 3 cut(s) | 1053, 1222, 2645 |
| Alw26I | GTCTC | 6 cut(s) | 695, 913, 1238, 2751, 3120, 3311 |
| Alw44I | GTGCAC | 1 cut(s) | 2641 |
| AlwI | GGATC | 4 cut(s) | 162, 1406, 3205, 3702 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 377, 698 |
| Aor13HI | TCCGGA | 2 cut(s) | 107, 290 |
| Aor51HI | AGCGCT | 2 cut(s) | 1708, 1809 |
| AoxI | GGCC | 4 cut(s) | 187, 415, 952, 2132 |
| ApaLI | GTGCAC | 1 cut(s) | 2641 |
| ApoI | RAATTY | 6 cut(s) | 194, 203, 782, 1208, 1365, 1685 |
| AseI | ATTAAT | 1 cut(s) | 3156 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3277, 3533 |
| AspLEI | GCGC | 2 cut(s) | 1709, 1810 |
| AspS9I | GGNCC | 8 cut(s) | 95, 560, 761, 862, 2133, 2729, 2959, 3769 |
| AsuC2I | CCSGG | 1 cut(s) | 2136 |
| AsuHPI | GGTGA | 8 cut(s) | 269, 503, 1030, 1638, 2307, 2642, 2728, 3656 |
| AvaII | GGWCC | 7 cut(s) | 95, 560, 761, 862, 2729, 2959, 3769 |
| AxyI | CCTNAGG | 1 cut(s) | 974 |
| BaeGI | GKGCMC | 2 cut(s) | 918, 2645 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 471, 504 |
| BalI | TGGCCA | 1 cut(s) | 954 |
| BanII | GRGCYC | 1 cut(s) | 1053 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3389, 3421 |
| BauI | CACGAG | 1 cut(s) | 637 |
| BbsI | GAAGAC | 4 cut(s) | 975, 3350, 3619, 3781 |
| Bbv12I | GWGCWC | 3 cut(s) | 1053, 1222, 2645 |
| BceAI | ACGGC | 2 cut(s) | 2831, 3814 |
| BciVI | GTATCC | 1 cut(s) | 2380 |
| BclI | TGATCA | 1 cut(s) | 432 |
| BcnI | CCSGG | 1 cut(s) | 2136 |
| BcoDI | GTCTC | 6 cut(s) | 695, 913, 1238, 2751, 3120, 3311 |
| BcuI | ACTAGT | 2 cut(s) | 425, 2213 |
| BfaI | CTAG | 6 cut(s) | 342, 426, 2214, 2277, 2735, 3672 |
| BfmI | CTRYAG | 4 cut(s) | 1734, 2514, 2616, 2902 |
| BfoI | RGCGCY | 2 cut(s) | 1710, 1811 |
| BfrI | CTTAAG | 1 cut(s) | 1165 |
| BfuAI | ACCTGC | 1 cut(s) | 1441 |
| BfuI | GTATCC | 1 cut(s) | 2380 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1354 |
| BglII | AGATCT | 1 cut(s) | 468 |
| Bme18I | GGWCC | 7 cut(s) | 95, 560, 761, 862, 2729, 2959, 3769 |
| BmgBI | CACGTC | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 8 cut(s) | 95, 560, 761, 862, 2133, 2729, 2959, 3769 |
| BmiI | GGNNCC | 6 cut(s) | 56, 313, 981, 1555, 2953, 3770 |
| BmrI | ACTGGG | 2 cut(s) | 177, 3601 |
| BmsI | GCATC | 9 cut(s) | 113, 376, 797, 1303, 1737, 2563, 2670, 3493, 3810 |
| BmuI | ACTGGG | 2 cut(s) | 177, 3601 |
| BpiI | GAAGAC | 4 cut(s) | 975, 3350, 3619, 3781 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2822, 2854 |
| BpmI | CTGGAG | 3 cut(s) | 564, 3061, 3111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3303 |
| BpuEI | CTTGAG | 2 cut(s) | 434, 3621 |
| BpuMI | CCSGG | 1 cut(s) | 2136 |
| Bsa29I | ATCGAT | 1 cut(s) | 384 |
| BsaBI | GATNNNNATC | 3 cut(s) | 153, 1133, 1397 |
| BsaHI | GRCGYC | 2 cut(s) | 3624, 3648 |
| BsaI | GGTCTC | 1 cut(s) | 3120 |
| BsaWI | WCCGGW | 2 cut(s) | 107, 290 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1578, 1608, 2700, 2730 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 39, 107, 1333, 1739, 1877, 2564, 2948, 3576 |
| Bse1I | ACTGG | 9 cut(s) | 172, 547, 881, 1440, 2743, 3035, 3044, 3094, 3596 |
| Bse21I | CCTNAGG | 1 cut(s) | 974 |
| Bse3DI | GCAATG | 3 cut(s) | 1509, 1562, 1845 |
| Bse8I | GATNNNNATC | 3 cut(s) | 153, 1133, 1397 |
| BseAI | TCCGGA | 2 cut(s) | 107, 290 |
| BseCI | ATCGAT | 1 cut(s) | 384 |
| BseJI | GATNNNNATC | 3 cut(s) | 153, 1133, 1397 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 39, 107, 1333, 1739, 1877, 2564, 2948, 3576 |
| BseMI | GCAATG | 3 cut(s) | 1509, 1562, 1845 |
| BseMII | CTCAG | 8 cut(s) | 227, 690, 729, 924, 1768, 2478, 3014, 3317 |
| BseNI | ACTGG | 9 cut(s) | 172, 547, 881, 1440, 2743, 3035, 3044, 3094, 3596 |
| BseRI | GAGGAG | 2 cut(s) | 2721, 3764 |
| BseSI | GKGCMC | 2 cut(s) | 918, 2645 |
| BseYI | CCCAGC | 3 cut(s) | 1184, 1332, 2657 |
| BsgI | GTGCAG | 1 cut(s) | 1107 |
| Bsh1236I | CGCG | 1 cut(s) | 766 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3560 |
| BshFI | GGCC | 4 cut(s) | 189, 417, 954, 2134 |
| BshVI | ATCGAT | 1 cut(s) | 384 |
| BsiEI | CGRYCG | 1 cut(s) | 3560 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1053, 1222, 2645 |
| BsiSI | CCGG | 3 cut(s) | 108, 291, 2136 |
| BslFI | GGGAC | 1 cut(s) | 1201 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 39, 107, 1333, 1739, 1877, 2564, 2948, 3576 |
| BsmAI | GTCTC | 6 cut(s) | 695, 913, 1238, 2751, 3120, 3311 |
| BsmBI | CGTCTC | 1 cut(s) | 695 |
| BsmFI | GGGAC | 1 cut(s) | 1201 |
| BsmI | GAATGC | 2 cut(s) | 389, 2452 |
| BsnI | GGCC | 4 cut(s) | 189, 417, 954, 2134 |
| Bso31I | GGTCTC | 1 cut(s) | 3120 |
| Bsp1286I | GDGCHC | 4 cut(s) | 918, 1053, 1222, 2645 |
| Bsp13I | TCCGGA | 2 cut(s) | 107, 290 |
| Bsp1407I | TGTACA | 2 cut(s) | 925, 1477 |
| Bsp143I | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| Bsp19I | CCATGG | 1 cut(s) | 1619 |
| BspANI | GGCC | 4 cut(s) | 189, 417, 954, 2134 |
| BspCNI | CTCAG | 8 cut(s) | 226, 691, 730, 923, 1767, 2479, 3013, 3316 |
| BspDI | ATCGAT | 1 cut(s) | 384 |
| BspEI | TCCGGA | 2 cut(s) | 107, 290 |
| BspFNI | CGCG | 1 cut(s) | 766 |
| BspHI | TCATGA | 4 cut(s) | 393, 3075, 3369, 3516 |
| BspLI | GGNNCC | 6 cut(s) | 56, 313, 981, 1555, 2953, 3770 |
| BspMI | ACCTGC | 1 cut(s) | 1441 |
| BspPI | GGATC | 4 cut(s) | 162, 1406, 3205, 3702 |
| BspQI | GCTCTTC | 3 cut(s) | 1058, 2066, 2845 |
| BspTI | CTTAAG | 1 cut(s) | 1165 |
| BspTNI | GGTCTC | 1 cut(s) | 3120 |
| BsrDI | GCAATG | 3 cut(s) | 1509, 1562, 1845 |
| BsrGI | TGTACA | 2 cut(s) | 925, 1477 |
| BsrI | ACTGG | 9 cut(s) | 172, 547, 881, 1440, 2743, 3035, 3044, 3094, 3596 |
| BssMI | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| BssNAI | GTATAC | 1 cut(s) | 1108 |
| BssNI | GRCGYC | 2 cut(s) | 3624, 3648 |
| BssSI | CACGAG | 1 cut(s) | 637 |
| Bst1107I | GTATAC | 1 cut(s) | 1108 |
| Bst2BI | CACGAG | 1 cut(s) | 637 |
| Bst6I | CTCTTC | 5 cut(s) | 1058, 2066, 2082, 2845, 3782 |
| BstACI | GRCGYC | 2 cut(s) | 3624, 3648 |
| BstAFI | CTTAAG | 1 cut(s) | 1165 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1067, 1268, 1436 |
| BstAUI | TGTACA | 2 cut(s) | 925, 1477 |
| BstDSI | CCRYGG | 2 cut(s) | 1619, 2847 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 37, 2562 |
| BstFNI | CGCG | 1 cut(s) | 766 |
| BstH2I | RGCGCY | 2 cut(s) | 1710, 1811 |
| BstHHI | GCGC | 2 cut(s) | 1709, 1810 |
| BstKTI | GATC | 9 cut(s) | 157, 435, 471, 712, 1401, 2796, 3200, 3375, 3697 |
| BstMAI | GTCTC | 6 cut(s) | 695, 913, 1238, 2751, 3120, 3311 |
| BstMBI | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| BstMCI | CGRYCG | 1 cut(s) | 3560 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1007, 1067, 1148, 1268, 1354, 1436, 2011, 2582 |
| BstNSI | RCATGY | 1 cut(s) | 1065 |
| BstSFI | CTRYAG | 4 cut(s) | 1734, 2514, 2616, 2902 |
| BstSLI | GKGCMC | 2 cut(s) | 918, 2645 |
| BstUI | CGCG | 1 cut(s) | 766 |
| BstV2I | GAAGAC | 4 cut(s) | 975, 3350, 3619, 3781 |
| BstX2I | RGATCY | 4 cut(s) | 154, 468, 3197, 3694 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 2188, 2993, 3609 |
| BstYI | RGATCY | 4 cut(s) | 154, 468, 3197, 3694 |
| BstZ17I | GTATAC | 1 cut(s) | 1108 |
| Bsu15I | ATCGAT | 1 cut(s) | 384 |
| Bsu36I | CCTNAGG | 1 cut(s) | 974 |
| BsuI | GTATCC | 1 cut(s) | 2380 |
| BsuRI | GGCC | 4 cut(s) | 189, 417, 954, 2134 |
| BsuTUI | ATCGAT | 1 cut(s) | 384 |
| BtgI | CCRYGG | 2 cut(s) | 1619, 2847 |
| BtgZI | GCGATG | 1 cut(s) | 1286 |
| BtrI | CACGTC | 1 cut(s) | 6 |
| BtsI | GCAGTG | 1 cut(s) | 83 |
| BveI | ACCTGC | 1 cut(s) | 1441 |
| CaiI | CAGNNNCTG | 2 cut(s) | 377, 698 |
| CciI | TCATGA | 4 cut(s) | 393, 3075, 3369, 3516 |
| CfoI | GCGC | 2 cut(s) | 1709, 1810 |
| Cfr13I | GGNCC | 8 cut(s) | 95, 560, 761, 862, 2133, 2729, 2959, 3769 |
| ClaI | ATCGAT | 1 cut(s) | 384 |
| CseI | GACGC | 1 cut(s) | 3613 |
| CsiI | ACCWGGT | 2 cut(s) | 314, 2947 |
| DpnI | GATC | 9 cut(s) | 156, 434, 470, 711, 1400, 2795, 3199, 3374, 3696 |
| DpnII | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| DraI | TTTAAA | 1 cut(s) | 1303 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2736 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2736 |
| EaeI | YGGCCR | 2 cut(s) | 187, 952 |
| Eam1104I | CTCTTC | 5 cut(s) | 1058, 2066, 2082, 2845, 3782 |
| EarI | CTCTTC | 5 cut(s) | 1058, 2066, 2082, 2845, 3782 |
| EciI | GGCGGA | 1 cut(s) | 52 |
| Ecl136II | GAGCTC | 1 cut(s) | 1051 |
| Eco24I | GRGCYC | 1 cut(s) | 1053 |
| Eco31I | GGTCTC | 1 cut(s) | 3120 |
| Eco47I | GGWCC | 7 cut(s) | 95, 560, 761, 862, 2729, 2959, 3769 |
| Eco47III | AGCGCT | 2 cut(s) | 1708, 1809 |
| Eco53kI | GAGCTC | 1 cut(s) | 1051 |
| Eco57I | CTGAAG | 2 cut(s) | 1456, 1797 |
| Eco81I | CCTNAGG | 1 cut(s) | 974 |
| EcoICRI | GAGCTC | 1 cut(s) | 1051 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 37, 2562 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2959, 3769 |
| EcoRI | GAATTC | 2 cut(s) | 782, 1365 |
| EcoT22I | ATGCAT | 2 cut(s) | 391, 3298 |
| EcoT38I | GRGCYC | 1 cut(s) | 1053 |
| Esp3I | CGTCTC | 1 cut(s) | 695 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1049, 1081, 2168, 2200, 2999, 3031 |
| FaqI | GGGAC | 1 cut(s) | 1201 |
| FauI | CCCGC | 2 cut(s) | 2458, 3262 |
| FauNDI | CATATG | 2 cut(s) | 985, 2320 |
| FbaI | TGATCA | 1 cut(s) | 432 |
| FblI | GTMKAC | 2 cut(s) | 753, 1107 |
| FriOI | GRGCYC | 1 cut(s) | 1053 |
| FspBI | CTAG | 6 cut(s) | 342, 426, 2214, 2277, 2735, 3672 |
| GlaI | GCGC | 2 cut(s) | 1708, 1809 |
| GsaI | CCCAGC | 3 cut(s) | 1188, 1336, 2661 |
| GsuI | CTGGAG | 3 cut(s) | 564, 3061, 3111 |
| HaeII | RGCGCY | 2 cut(s) | 1710, 1811 |
| HaeIII | GGCC | 4 cut(s) | 189, 417, 954, 2134 |
| HapII | CCGG | 3 cut(s) | 108, 291, 2136 |
| HgaI | GACGC | 1 cut(s) | 3613 |
| HhaI | GCGC | 2 cut(s) | 1709, 1810 |
| Hin1I | GRCGYC | 2 cut(s) | 3624, 3648 |
| Hin6I | GCGC | 2 cut(s) | 1707, 1808 |
| HinP1I | GCGC | 2 cut(s) | 1707, 1808 |
| HincII | GTYRAC | 1 cut(s) | 81 |
| HindII | GTYRAC | 1 cut(s) | 81 |
| HindIII | AAGCTT | 3 cut(s) | 143, 570, 2676 |
| HinfI | GANTC | 7 cut(s) | 356, 889, 1199, 1385, 1867, 1907, 2336 |
| HpaII | CCGG | 3 cut(s) | 108, 291, 2136 |
| HphI | GGTGA | 8 cut(s) | 269, 503, 1030, 1638, 2307, 2642, 2728, 3656 |
| Hpy99I | CGWCG | 1 cut(s) | 1932 |
| HpyCH4IV | ACGT | 9 cut(s) | 5, 278, 295, 532, 704, 1242, 2362, 3327, 3648 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1007, 1067, 1148, 1268, 1354, 1436, 2011, 2582 |
| HpySE526I | ACGT | 9 cut(s) | 5, 278, 295, 532, 704, 1242, 2362, 3327, 3648 |
| Hsp92I | GRCGYC | 2 cut(s) | 3624, 3648 |
| HspAI | GCGC | 2 cut(s) | 1707, 1808 |
| Kpn2I | TCCGGA | 2 cut(s) | 107, 290 |
| Ksp22I | TGATCA | 1 cut(s) | 432 |
| Kzo9I | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| LguI | GCTCTTC | 3 cut(s) | 1058, 2066, 2845 |
| LmnI | GCTCC | 5 cut(s) | 1048, 1217, 1704, 1714, 3167 |
| LweI | GCATC | 9 cut(s) | 113, 376, 797, 1303, 1737, 2563, 2670, 3493, 3810 |
| MabI | ACCWGGT | 2 cut(s) | 314, 2947 |
| MaeI | CTAG | 6 cut(s) | 342, 426, 2214, 2277, 2735, 3672 |
| MaeII | ACGT | 9 cut(s) | 5, 278, 295, 532, 704, 1242, 2362, 3327, 3648 |
| MalI | GATC | 9 cut(s) | 156, 434, 470, 711, 1400, 2795, 3199, 3374, 3696 |
| MboI | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| MfeI | CAATTG | 5 cut(s) | 1146, 1671, 2589, 3498, 3603 |
| MflI | RGATCY | 4 cut(s) | 154, 468, 3197, 3694 |
| MhlI | GDGCHC | 4 cut(s) | 918, 1053, 1222, 2645 |
| MlsI | TGGCCA | 1 cut(s) | 954 |
| MluNI | TGGCCA | 1 cut(s) | 954 |
| MlyI | GAGTC | 1 cut(s) | 1901 |
| MmeI | TCCRAC | 5 cut(s) | 261, 289, 538, 1720, 2437 |
| Mox20I | TGGCCA | 1 cut(s) | 954 |
| Mph1103I | ATGCAT | 2 cut(s) | 391, 3298 |
| MroI | TCCGGA | 2 cut(s) | 107, 290 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3277, 3533 |
| MscI | TGGCCA | 1 cut(s) | 954 |
| MslI | CAYNNNNRTG | 3 cut(s) | 407, 2186, 3425 |
| Msp20I | TGGCCA | 1 cut(s) | 954 |
| MspA1I | CMGCKG | 2 cut(s) | 2286, 3269 |
| MspCI | CTTAAG | 1 cut(s) | 1165 |
| MspI | CCGG | 3 cut(s) | 108, 291, 2136 |
| MunI | CAATTG | 5 cut(s) | 1146, 1671, 2589, 3498, 3603 |
| Mva1269I | GAATGC | 2 cut(s) | 389, 2452 |
| MvnI | CGCG | 1 cut(s) | 766 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1007, 1067, 1148, 1268, 1354, 1436, 2011, 2582 |
| NciI | CCSGG | 1 cut(s) | 2136 |
| NcoI | CCATGG | 1 cut(s) | 1619 |
| NdeI | CATATG | 2 cut(s) | 985, 2320 |
| NdeII | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| NlaIV | GGNNCC | 6 cut(s) | 56, 313, 981, 1555, 2953, 3770 |
| NmuCI | GTSAC | 3 cut(s) | 175, 847, 3644 |
| NsiI | ATGCAT | 2 cut(s) | 391, 3298 |
| NspI | RCATGY | 1 cut(s) | 1065 |
| PaeI | GCATGC | 1 cut(s) | 1065 |
| PagI | TCATGA | 4 cut(s) | 393, 3075, 3369, 3516 |
| PaqCI | CACCTGC | 1 cut(s) | 1441 |
| PciSI | GCTCTTC | 3 cut(s) | 1058, 2066, 2845 |
| PctI | GAATGC | 2 cut(s) | 389, 2452 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3277, 3533 |
| PfeI | GAWTC | 6 cut(s) | 356, 889, 1199, 1385, 1867, 2336 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3576 |
| PleI | GAGTC | 1 cut(s) | 1901 |
| PpsI | GAGTC | 1 cut(s) | 1901 |
| PpuMI | RGGWCCY | 2 cut(s) | 2959, 3769 |
| PshBI | ATTAAT | 1 cut(s) | 3156 |
| Psp124BI | GAGCTC | 1 cut(s) | 1053 |
| Psp1406I | AACGTT | 1 cut(s) | 278 |
| Psp5II | RGGWCCY | 2 cut(s) | 2959, 3769 |
| PspFI | CCCAGC | 3 cut(s) | 1184, 1332, 2657 |
| PspN4I | GGNNCC | 6 cut(s) | 56, 313, 981, 1555, 2953, 3770 |
| PspPI | GGNCC | 8 cut(s) | 95, 560, 761, 862, 2133, 2729, 2959, 3769 |
| PspPPI | RGGWCCY | 2 cut(s) | 2959, 3769 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3038, 3070 |
| PstNI | CAGNNNCTG | 2 cut(s) | 377, 698 |
| PsuI | RGATCY | 4 cut(s) | 154, 468, 3197, 3694 |
| RseI | CAYNNNNRTG | 3 cut(s) | 407, 2186, 3425 |
| SacI | GAGCTC | 1 cut(s) | 1053 |
| SapI | GCTCTTC | 3 cut(s) | 1058, 2066, 2845 |
| Sau3AI | GATC | 9 cut(s) | 154, 432, 468, 709, 1398, 2793, 3197, 3372, 3694 |
| Sau96I | GGNCC | 8 cut(s) | 95, 560, 761, 862, 2133, 2729, 2959, 3769 |
| SchI | GAGTC | 1 cut(s) | 1901 |
| SduI | GDGCHC | 4 cut(s) | 918, 1053, 1222, 2645 |
| SexAI | ACCWGGT | 2 cut(s) | 314, 2947 |
| SfaNI | GCATC | 9 cut(s) | 113, 376, 797, 1303, 1737, 2563, 2670, 3493, 3810 |
| SfcI | CTRYAG | 4 cut(s) | 1734, 2514, 2616, 2902 |
| SinI | GGWCC | 7 cut(s) | 95, 560, 761, 862, 2729, 2959, 3769 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 407, 2186, 3425 |
| SmlI | CTYRAG | 3 cut(s) | 449, 1165, 3636 |
| SmoI | CTYRAG | 3 cut(s) | 449, 1165, 3636 |
| SpeI | ACTAGT | 2 cut(s) | 425, 2213 |
| SphI | GCATGC | 1 cut(s) | 1065 |
| SspI | AATATT | 2 cut(s) | 1784, 2765 |
| SspMI | CTAG | 6 cut(s) | 342, 426, 2214, 2277, 2735, 3672 |
| SstI | GAGCTC | 1 cut(s) | 1053 |
| TaiI | ACGT | 9 cut(s) | 8, 281, 298, 535, 707, 1245, 2365, 3330, 3651 |
| TaqI | TCGA | 4 cut(s) | 384, 2427, 2664, 2857 |
| TatI | WGTACW | 4 cut(s) | 925, 1192, 1477, 3405 |
| TauI | GCSGC | 2 cut(s) | 189, 2588 |
| TfiI | GAWTC | 6 cut(s) | 356, 889, 1199, 1385, 1867, 2336 |
| TseFI | GTSAC | 3 cut(s) | 175, 847, 3644 |
| Tsp45I | GTSAC | 3 cut(s) | 175, 847, 3644 |
| TspGWI | ACGGA | 3 cut(s) | 1493, 2407, 2523 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3576 |
| Vha464I | CTTAAG | 1 cut(s) | 1165 |
| VneI | GTGCAC | 1 cut(s) | 2641 |
| VpaK11BI | GGWCC | 7 cut(s) | 95, 560, 761, 862, 2729, 2959, 3769 |
| VspI | ATTAAT | 1 cut(s) | 3156 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 37, 2562 |
| XapI | RAATTY | 6 cut(s) | 194, 203, 782, 1208, 1365, 1685 |
| XbaI | TCTAGA | 1 cut(s) | 341 |
| XceI | RCATGY | 1 cut(s) | 1065 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 1378, 1626, 1993, 2545 |
| XmiI | GTMKAC | 2 cut(s) | 753, 1107 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3277, 3533 |
| XspI | CTAG | 6 cut(s) | 342, 426, 2214, 2277, 2735, 3672 |
| ZraI | GACGTC | 1 cut(s) | 3649 |
| Zsp2I | ATGCAT | 2 cut(s) | 391, 3298 |