Prupe.6G122100_v2.0.a1

Pleiotropic drug resistance protein 2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
9085415 .. 9093444
8030 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G122100.1

Sequence Viewer

Length: 4341 bp
ATGGCGGCGGCATTAGCCGGAGATGATCTGGCAAGGCAGTCTAGCAGCCGGCGGAGCTGGAGGTCGACGAGTGTTCGGGAAATGTGGAACGCGCCCGACGTGTTTCAGCGGAGTGGGCGGCAGCAAGCGGTGGATGAGGAGGAGGAGCTCAGGTGGGCAGCTATAGAGAGGCTGCCCACTTATGATAGGATGAGGAGGGGGATGTTGAGACAGGCCATGAGCAATGGGAGGGTTATAACTGAAGAAGTTGATGTTGCAAACCTCGGAGCTCAGGATAAGAAGCAGTTGATGGAGAGCATACTTAAGGTTGTTGAGGAGGATAATGAGAGGTTCTTGCAGAGGCTCAGAGCCAGAAATGACAGGGTTGGTATTGAGGTTCCTAAGGTTGAAGTTAGATTCCAGAATGTATCAATAGAGGGAGATGCATATGTTGGCACTCGAGCACTTCCAACTCTGCTAAATTCCACATTGAATCAACTAGAGGGACTAATTGGGTTGATTGGACTCTCACCGTCAAAGAAAAGAGTTGTCAAGATACTCCAAGATGTGAGCGGTATTATTAAACCATCAAGGATGACACTGCTTCTTGGACCTCCATCGTCAGGAAAAACAACACTGCTAAAAGCACTTGCTGGAAAGCTTGATAAGGATCTAAGGGAAACTGGGAAAGTGACCTACTGTGGCCATGAATTCAAGGAATTTGTGCCTCGGAGAACCTCTGCTTATATTAGTCAGCATGATCTTCATTATGGTGAGATGACAGTTCGTGAGACATTGGATTTCTCTGGACGTTGCCTGGGAGTTGGAACCAGGTATGATATGCTTGTAGAGTTGTCTAGACGGGAGAAAGATTCAGGCATCAAACCAGATCCTGAGATTGATGCATTCATGAAAGCCACATCTATGACAGGCCAGGAAACTAGTTTGATCACAGATTATGTTCTCAAGATACTTGGGCTTGATATCTGTGCTGATATTATGGTGGGTGATGACATGAGAAGGGGCATATCTGGTGGACAGAAGAAACGTGTAACTACTGGAGAAATGTTGGTTGGACCAGCGAAAGCATTTTTCATGGATGAAATATCAACAGGGCTGGACAGTTCCACAACCTTTCAGATTGTGAAGTTCATGAGACAGATGGTTCATATCATGGATGTGTCTATGGTCATCTCTCTCTTGCAACCAGCACCTGAGTCTTATGATCTTTTTGATGACATTATCCTTCTTTCTGAGGGTCAGATTGTCTACCAAGGCCCACGTGAGAATGTTCTGGAATTCTTTGAATTTATGGGGTTCAGATGCCCAGACAGAAAGGGTGTTGCAGACTTTTTGCAAGAAGTGACCTCAAAGAAGGACCAAGAACAATACTGGTATAAGAAGAACCAACCTTATAGATATGTCTCAGTATCTGATTTCGTTCGGGCTTTCACCACTTTCCATGTTGGCCAACGGCTTGTGGAAGAACTAAGAGTTCCATACGATAAACGAACAGTCCATCCTGCTGCATTGGTGAAGGAAAAGTATGGAATATCCAATATGGAGATCTTCAAGGCATGCTTTGCGAGGGAATGGTTGCTGATGAAGCGTAACTCTTTTGTATACATATTCAAAACTACCCAGATAACAATCATGGCTACAATTGCTCTGACGGTATTCTTAAGAACAGAAATGAAAGCTGGACAAGCACAAGATTCGGCAAAATTTTGGGGAGCACTGTTTTTCAGTCTCATTAACGTCATGTTTAATGGAATGGCAGAGCTTGCCATGACAGTTTTCAGGCTTCCTGTGTTCTTCAAACAAAGGGATGCCTTGTTCTTCCCTGGCTGGGCCTTTGGCTTGCCCATTTGGCTAACCAGAATTCCCATTTCACTGATGGAATCTGGGATATGGATAATTTTGACATACTACAGCATTGGATTTGCACCTGCTGCCAGTAGGTTCTTCAAACAGTTCTTGGCTTTCTTTGGTATACACCAGATGGCTCTCTCCCTCTTCCGTTTCATTGCTGCCCTTGGTAGAAGTGAGGTTGTTTCGGGCACAATTGGTTCTTTTACATTGCTACTCGTGTTTGTCCTAGGAGGTTTTGTTGTTGCTAAAGATGACATTTTGCCATGGATGATATGGGGCTACTATGTTTCACCTATGATGTATGGGCAAAATGCAATTGCTATCAATGAATTTCTTGATAAAAGATGGAGCACTCCTGTCAACGGCAATGACACAGTTGGAAAGGTACTTCTGAGGGAAAGAGGCCTGTTTACTACAGAGACTTGGTATTGGATTTGTGTTGGAGCGCTCTTCGGGTTTTCTCTTCTTTTTAATGTTCTTTTCATTGGAGCACTGACCTTCTTAGATCCTCTTAGTGAAACTAAAACTCTAATTGAGAATGACGACAACTCTGAAAGTAGGAAGAGGCGACAATCCAATCCAGAAGGTATTGATATGCAAGTCAGAAATGCTCAAGGAATTGTTAGTGCTGAAAATAACCAAGCCAAGCGAGGAATGGTTTTGCCCTTCCAGCCCCTCTCACTTGCTTTCAACCATGTGAATTACTATGTGGATATGCCTGCTGAAATGAAGAGCCAAGGGATTGAAGAGACCCGACTGCAACTTCTACGAGATGTTAGTGGTGCATTTAGGCCGGGTGTTTTGACTGCATTAGTTGGTGTCAGTGGTGCTGGAAAGACCACCTTGATGGATGTCTTAGCTGGAAGAAAGACCGGCGGCTATATTGAAGGAAGTATTACGATCTCTGGTTTCCCAAAGAACCAAGCCACATTTGCCCGGGTCAGCGGTTACTGTGAACAGAATGACATTCATTCACCATTTGTTACTGTCTATGAATCTCTCCTATACTCTGCCTGGCTACGTATTTCCAAGGATGTCAAAACGGAGACACGAAAGATGTTTGTTGATGAGGTTATGGACTTGGTGGAGCTTAACCCATTGAGGCATGCTTTAGTTGGACTTCCAGGAGTTGATGGACTTTCGACTGAGCAGAGAAAGAGGCTCACCATTGCTGTAGAATTGGTTGCCAACCCTTCCATCATCTTTATGGATGAGCCAACGTCAGGTCTTGATGCTAGAGCAGCTGCAATTGTTATGCGTACTGTGAGAAACACTGTGGATACAGGACGAACTGTTGTCTGTACAATTCACCAACCTAGCATTGACATTTTTGAAGCATTTGATGAGCTTTTCTTAATGAAAAGAGGAGGACAGGTGATTTATGCAGGTCCTCTAGGTCGCCAGTCTCACAAGCTTGTTGAATACTTTGAGGCTATTCCAGGGGTTTCCAAGATCAAAGAAGGTTACAATCCTGCTACCTGGATGTTAGAGGTCAGCTCTGCTTCAATTGAAGCTCAAAATGACGTGGACTTTGCAGAAATATTTGCAAACTCTGATCTCTATAGGAGAAATCAGGAACTTATCAAGGAACTAAGCGTACCAGAACCAGGCTCCAAGGATCTTTACTTCCCCACCCAATACTCCCAAAGCTTTTTAACTCAGTGCAAGGCTTGCTTCTGGAAACAACACTGGTCATACTGGAGGAACTCACGGTACAATGCCATTAGGTTTTTCATGACAATTTGCATCGGAGTATTATTTGGTATTATCTTCTGGGGCAAAGGAGACGATATACACAAGCAACAAGACCTGATTAATCTTTTGGGAGCTACCTATTCTGCTATTCTTTTCCTTGGAGCTAGCAATGCTTCTGCTGTGCAATCTGTGGTTGCGGTTGAACGAACAGTTTTCTATCGTGAAAGAGCAGCGGGAATGTATTCAGAGTTGCCGTATGCATTTGCTCAGGTGGCTATTGAGACAATTTATGTTGCAATCCAAACCCTTGTCTATTCCTGTCTTCTATTTTTCATGATCGGGTACAATTTTAAGGTGGAGAAGTTTCTGTACTTCTACTACTTCATATTCATGTGCTTTACCTACTTCTCAATGTACGGGATGATGGTGGTTGCCCTAACTCCTGGCCATCAAATTGCTGCAATTACTATGTCTTTCTTCTTGAGCTTCTGGAACTTGTTCTCTGGTTTCCTCATCCCCAGGCCGCTAATTCCCATCTGGTGGAGGTGGTACTACTGGGGTTCTCCAGTTGCTTGGACAATCTATGGTATCTTCACATCCCAAGTTGGTGACATAAAGACAGAGATCACAGTTAATATTGACGAAAAAAAAGCTGTTGATGTATTCCTTAAAGAGTTTTTAGGTTTTGACTACGATTTTCTGATCCCTGTTGTCGTTGCGCATGTTGGTTGGGTCCTCCTCTTCTTCTTTGTCTTTGCATACGGCATCAAGTTCTTGAACTTCCAAAGGAGATAA

Protein Analysis

1447

Amino Acids

164.28

Weight (kDa)

8.14

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000245)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G66950 AT2G36380
fragaria_vesca FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29700 FvH4_3g29710 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29740 FvH4_3g29760 FvH4_3g29781 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150 FvH4_6g18150
malus_domestica MD02G1254900.v1.1 MD03G1119400.v1.1 MD03G1136800.v1.1 MD03G1137000.v1.1 MD04G1187500.v1.1 MD08G1208900.v1.1 MD08G1209000.v1.1 MD11G1159000.v1.1 MD11G1159100.v1.1 MD11G1159200.v1.1 MD12G1020800.v1.1 MD12G1021000.v1.1 MD14G1017900.v1.1 MD14G1018100.v1.1
prunus_persica Prupe.2G084300_v2.0.a1 Prupe.2G084300_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121200_v2.0.a1 Prupe.6G121500_v2.0.a1 Prupe.6G121800_v2.0.a1 Prupe.6G121900_v2.0.a1 Prupe.6G122100_v2.0.a1 Prupe.7G115200_v2.0.a1 Prupe.7G115200_v2.0.a1
pyrus_communis pycom02g21460 pycom03g09270 pycom03g09290 pycom07g05130 pycom08g18050 pycom11g12950 pycom11g12960 pycom11g12970 pycom12g01950 pycom12g01980 pycom14g01620 pycom14g01710 pycom14g01720 pycom16g12190
rosa_chinensis RchiOBHm_Chr1g0340571 RchiOBHm_Chr2g0107751 RchiOBHm_Chr3g0472451 RchiOBHm_Chr5g0055051 RchiOBHm_Chr5g0055091 RchiOBHm_Chr5g0055111 RchiOBHm_Chr5g0055121 RchiOBHm_Chr5g0055131 RchiOBHm_Chr5g0062371 RchiOBHm_Chr6g0265121 RchiOBHm_Chr6g0275771 RchiOBHm_Chr7g0187231
rosa_laevigata RLG00000006319 RLG00000013820 RLG00000024078 RLG00000034960 RLG00000034963 RLG00000034965 RLG00000034966 RLG00000034968 RLG00000034970
rosa_multiflora Rmu_co8358859.1_g000001 Rmu_co8422375.1_g000001 Rmu_co8427767.1_g000001 Rmu_co8474941.1_g000001 Rmu_sc0000925.1_g000009 Rmu_sc0001694.1_g000015 Rmu_sc0001694.1_g000022 Rmu_sc0001694.1_g000024 Rmu_sc0001694.1_g000030 Rmu_sc0003993.1_g000001 Rmu_sc0010632.1_g000001 Rmu_sc0035175.1_g000001
rosa_roxburghii Rroxscaffold_1G00025230 Rroxscaffold_1G00025240 Rroxscaffold_1G00025300 Rroxscaffold_1G00025320 Rroxscaffold_1G00025330 Rroxscaffold_1G00025360 Rroxscaffold_1G00025440 Rroxscaffold_1G00033590 Rroxscaffold_6G00408900
rosa_rugosa Rorug03G0125500.1 Rorug03G0125600.1 Rorug05G0290600 Rorug05G0291100 Rorug05G0291200 Rorug05G0291300
rosa_samantha Rh1CG035400 Rh1CG243200 Rh2DG410600 Rh3AG177500 Rh3CG193800 Rh3CG200900 Rh3DG171700 Rh5AG043000 Rh5AG360500 Rh5AG360900 Rh5AG361000 Rh5AG361300 Rh5AG441100 Rh5CG393700 Rh5CG393900 Rh5CG394200 Rh5DG247300 Rh5DG385200 Rh5DG385500 Rh5DG385800 Rh6BG272200 Rh6DG204000 Rh7AG084700 Rh7AG178300
rosa_wichuraiana Rw0G022120 Rw3G016410 Rw5G033910 Rw5G033920 Rw5G033940 Rw5G033960 Rw5G033970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 236
AarI CACCTGC 1 cut(s) 1936
Acc16I TGCGCA 1 cut(s) 4266
Acc36I ACCTGC 2 cut(s) 1936, 3227
AccB7I CCANNNNNTGG 1 cut(s) 4086
AccBSI CCGCTC 1 cut(s) 552
AccI GTMKAC 4 cut(s) 65, 1248, 1602, 1972
AccII CGCG 1 cut(s) 92
AclWI GGATC 5 cut(s) 657, 863, 2351, 3477, 4243
AcoI YGGCCR 3 cut(s) 682, 1447, 3991
AcsI RAATTY 8 cut(s) 460, 689, 698, 1277, 1286, 1703, 1860, 2180
AcuI CTGAAG 1 cut(s) 261
AcvI CACGTG 1 cut(s) 1262
AfaI GTAC 9 cut(s) 2238, 3112, 3154, 3450, 3566, 3890, 3917, 3962, 4097
AfeI AGCGCT 1 cut(s) 2298
AfiI CCNNNNNNNGG 6 cut(s) 602, 1828, 2213, 3074, 3458, 4086
AflII CTTAAG 2 cut(s) 302, 1660
AflIII ACRYGT 2 cut(s) 99, 1027
AhlI ACTAGT 1 cut(s) 920
AjiI CACGTC 2 cut(s) 100, 3376
AjuI GAANNNNNNNTTGG 2 cut(s) 1035, 1067
AloI GAACNNNNNNTCC 4 cut(s) 1483, 1515, 1799, 1831
Alw21I GWGCWC 6 cut(s) 150, 271, 445, 1717, 2204, 2344
AlwI GGATC 5 cut(s) 657, 863, 2351, 3477, 4243
AlwNI CAGNNNCTG 3 cut(s) 872, 1193, 1412
Ama87I CYCGRG 2 cut(s) 438, 2787
Aor51HI AGCGCT 1 cut(s) 2298
ApoI RAATTY 8 cut(s) 460, 689, 698, 1277, 1286, 1703, 1860, 2180
ArsI GACNNNNNNTTYG 2 cut(s) 3365, 3397
AseI ATTAAT 1 cut(s) 3666
Asp700I GAANNNNTTC 2 cut(s) 3787, 4043
AspA2I CCTAGG 1 cut(s) 2077
AspLEI GCGC 3 cut(s) 94, 2299, 4267
AspS9I GGNCC 7 cut(s) 590, 1055, 1256, 1357, 1830, 3239, 4279
AsuC2I CCSGG 3 cut(s) 2646, 2788, 2789
AsuNHI GCTAGC 1 cut(s) 3710
AvaI CYCGRG 2 cut(s) 438, 2787
AvaII GGWCC 5 cut(s) 590, 1055, 1357, 3239, 4279
AvrII CCTAGG 1 cut(s) 2077
AxyI CCTNAGG 1 cut(s) 381
BaeGI GKGCMC 1 cut(s) 2042
BalI TGGCCA 3 cut(s) 684, 1449, 3993
BanII GRGCYC 2 cut(s) 150, 271
BarI GAAGNNNNNNTAC 2 cut(s) 3899, 3931
BauI CACGAG 1 cut(s) 2066
BbrPI CACGTG 1 cut(s) 1262
BbsI GAAGAC 1 cut(s) 3860
Bbv12I GWGCWC 6 cut(s) 150, 271, 445, 1717, 2204, 2344
BceAI ACGGC 4 cut(s) 1469, 2230, 3784, 4324
BcgI CGANNNNNNTGC 2 cut(s) 1677, 1711
BciVI GTATCC 1 cut(s) 3124
BclI TGATCA 1 cut(s) 927
BcnI CCSGG 3 cut(s) 2646, 2788, 2789
BcuI ACTAGT 1 cut(s) 920
BfaI CTAG 9 cut(s) 42, 479, 837, 921, 2078, 3087, 3168, 3245, 3711
BfmI CTRYAG 5 cut(s) 162, 1909, 2265, 3024, 3412
BfoI RGCGCY 1 cut(s) 2300
BfrI CTTAAG 2 cut(s) 302, 1660
BfuAI ACCTGC 2 cut(s) 1936, 3227
BfuI GTATCC 1 cut(s) 3124
BglI GCCNNNNNGGC 1 cut(s) 1849
BglII AGATCT 1 cut(s) 1545
BlnI CCTAGG 1 cut(s) 2077
Bme18I GGWCC 5 cut(s) 590, 1055, 1357, 3239, 4279
BmeT110I CYCGRG 2 cut(s) 438, 2787
BmgBI CACGTC 2 cut(s) 100, 3376
BmgT120I GGNCC 7 cut(s) 590, 1055, 1256, 1357, 1830, 3239, 4279
BmiI GGNNCC 4 cut(s) 378, 808, 3463, 4280
BmrI ACTGGG 2 cut(s) 672, 4111
BmsI GCATC 8 cut(s) 412, 867, 871, 1292, 1798, 3073, 3606, 4320
BmtI GCTAGC 1 cut(s) 3714
BmuI ACTGGG 2 cut(s) 672, 4111
BpiI GAAGAC 1 cut(s) 3860
BplI GAGNNNNNCTC 2 cut(s) 3332, 3364
BpmI CTGGAG 4 cut(s) 79, 1059, 3571, 4095
Bpu10I CCTNAGC 3 cut(s) 149, 270, 3813
BpuEI CTTGAG 3 cut(s) 929, 2448, 4048
BpuMI CCSGG 3 cut(s) 2646, 2788, 2789
BsaAI YACGTR 2 cut(s) 1262, 2873
BsaBI GATNNNNATC 2 cut(s) 648, 1628
BsaI GGTCTC 1 cut(s) 2594
BsaXI ACNNNNNCTCC 6 cut(s) 137, 167, 2073, 2103, 3210, 3240
Bsc4I CCNNNNNNNGG 6 cut(s) 602, 1828, 2213, 3074, 3458, 4086
Bse118I RCCGGY 2 cut(s) 48, 2723
Bse1I ACTGG 9 cut(s) 667, 1042, 1376, 1935, 3253, 3545, 3554, 4106, 4112
Bse21I CCTNAGG 1 cut(s) 381
Bse3DI GCAATG 6 cut(s) 229, 2004, 2057, 2224, 3018, 3721
Bse8I GATNNNNATC 2 cut(s) 648, 1628
BseJI GATNNNNATC 2 cut(s) 648, 1628
BseLI CCNNNNNNNGG 6 cut(s) 602, 1828, 2213, 3074, 3458, 4086
BseMI GCAATG 6 cut(s) 229, 2004, 2057, 2224, 3018, 3721
BseNI ACTGG 9 cut(s) 667, 1042, 1376, 1935, 3253, 3545, 3554, 4106, 4112
BseRI GAGGAG 7 cut(s) 152, 155, 158, 208, 329, 3231, 4274
BseSI GKGCMC 1 cut(s) 2042
BseYI CCCAGC 1 cut(s) 1827
Bsh1236I CGCG 1 cut(s) 92
BsiHKAI GWGCWC 6 cut(s) 150, 271, 445, 1717, 2204, 2344
BsiHKCI CYCGRG 2 cut(s) 438, 2787
BsiSI CCGG 5 cut(s) 18, 49, 2645, 2724, 2788
BslFI GGGAC 1 cut(s) 498
BslI CCNNNNNNNGG 6 cut(s) 602, 1828, 2213, 3074, 3458, 4086
BsmBI CGTCTC 1 cut(s) 3630
BsmFI GGGAC 1 cut(s) 498
BsmI GAATGC 1 cut(s) 884
Bso31I GGTCTC 1 cut(s) 2594
BsoBI CYCGRG 2 cut(s) 438, 2787
Bsp1286I GDGCHC 7 cut(s) 150, 271, 445, 1717, 2042, 2204, 2344
Bsp1407I TGTACA 1 cut(s) 3152
Bsp19I CCATGG 1 cut(s) 2114
BspFNI CGCG 1 cut(s) 92
BspHI TCATGA 4 cut(s) 888, 1131, 3585, 3879
BspLI GGNNCC 4 cut(s) 378, 808, 3463, 4280
BspMI ACCTGC 2 cut(s) 1936, 3227
BspOI GCTAGC 1 cut(s) 3714
BspPI GGATC 5 cut(s) 657, 863, 2351, 3477, 4243
BspQI GCTCTTC 2 cut(s) 2306, 2576
BspTI CTTAAG 2 cut(s) 302, 1660
BspTNI GGTCTC 1 cut(s) 2594
BsrBI CCGCTC 1 cut(s) 552
BsrDI GCAATG 6 cut(s) 229, 2004, 2057, 2224, 3018, 3721
BsrFI RCCGGY 2 cut(s) 48, 2723
BsrGI TGTACA 1 cut(s) 3152
BsrI ACTGG 9 cut(s) 667, 1042, 1376, 1935, 3253, 3545, 3554, 4106, 4112
BssAI RCCGGY 2 cut(s) 48, 2723
BssNAI GTATAC 2 cut(s) 1603, 1973
BssSI CACGAG 1 cut(s) 2066
BssT1I CCWWGG 8 cut(s) 1252, 2014, 2077, 2114, 2587, 2880, 3465, 3703
Bst1107I GTATAC 2 cut(s) 1603, 1973
Bst2BI CACGAG 1 cut(s) 2066
Bst6I CTCTTC 7 cut(s) 2000, 2306, 2319, 2408, 2576, 2592, 4292
BstAFI CTTAAG 2 cut(s) 302, 1660
BstAPI GCANNNNNTGC 4 cut(s) 1562, 1763, 1931, 3522
BstAUI TGTACA 1 cut(s) 3152
BstBAI YACGTR 2 cut(s) 1262, 2873
BstC8I GCNNGC 9 cut(s) 50, 126, 1558, 1764, 1841, 2571, 2958, 3523, 3712
BstDSI CCRYGG 1 cut(s) 2114
BstFNI CGCG 1 cut(s) 92
BstH2I RGCGCY 1 cut(s) 2300
BstHHI GCGC 3 cut(s) 94, 2299, 4267
BstNSI RCATGY 3 cut(s) 1560, 2960, 4271
BstSFI CTRYAG 5 cut(s) 162, 1909, 2265, 3024, 3412
BstSLI GKGCMC 1 cut(s) 2042
BstSNI TACGTA 1 cut(s) 2873
BstUI CGCG 1 cut(s) 92
BstV2I GAAGAC 1 cut(s) 3860
BstX2I RGATCY 5 cut(s) 649, 868, 1545, 2356, 3469
BstXI CCANNNNNNTGG 2 cut(s) 2698, 4119
BstYI RGATCY 5 cut(s) 649, 868, 1545, 2356, 3469
BstZ17I GTATAC 2 cut(s) 1603, 1973
Bsu36I CCTNAGG 1 cut(s) 381
BsuI GTATCC 1 cut(s) 3124
BtgI CCRYGG 1 cut(s) 2114
BtrI CACGTC 2 cut(s) 100, 3376
BtsI GCAGTG 2 cut(s) 578, 614
BtsIMutI CAGTG 9 cut(s) 578, 614, 1715, 1871, 2342, 2680, 3123, 3518, 3538
BveI ACCTGC 2 cut(s) 1936, 3227
Cac8I GCNNGC 9 cut(s) 50, 126, 1558, 1764, 1841, 2571, 2958, 3523, 3712
CaiI CAGNNNCTG 3 cut(s) 872, 1193, 1412
CciI TCATGA 4 cut(s) 888, 1131, 3585, 3879
CfoI GCGC 3 cut(s) 94, 2299, 4267
Cfr10I RCCGGY 2 cut(s) 48, 2723
Cfr13I GGNCC 7 cut(s) 590, 1055, 1256, 1357, 1830, 3239, 4279
Cfr9I CCCGGG 1 cut(s) 2787
CsiI ACCWGGT 1 cut(s) 809
Csp6I GTAC 9 cut(s) 2237, 3111, 3153, 3449, 3565, 3889, 3916, 3961, 4096
CviQI GTAC 9 cut(s) 2237, 3111, 3153, 3449, 3565, 3889, 3916, 3961, 4096
EaeI YGGCCR 3 cut(s) 682, 1447, 3991
Eam1104I CTCTTC 7 cut(s) 2000, 2306, 2319, 2408, 2576, 2592, 4292
EarI CTCTTC 7 cut(s) 2000, 2306, 2319, 2408, 2576, 2592, 4292
EciI GGCGGA 1 cut(s) 67
Ecl136II GAGCTC 2 cut(s) 148, 269
Eco105I TACGTA 1 cut(s) 2873
Eco130I CCWWGG 8 cut(s) 1252, 2014, 2077, 2114, 2587, 2880, 3465, 3703
Eco147I AGGCCT 1 cut(s) 2256
Eco24I GRGCYC 2 cut(s) 150, 271
Eco31I GGTCTC 1 cut(s) 2594
Eco32I GATATC 1 cut(s) 964
Eco47I GGWCC 5 cut(s) 590, 1055, 1357, 3239, 4279
Eco47III AGCGCT 1 cut(s) 2298
Eco53kI GAGCTC 2 cut(s) 148, 269
Eco57I CTGAAG 1 cut(s) 261
Eco72I CACGTG 1 cut(s) 1262
Eco81I CCTNAGG 1 cut(s) 381
Eco88I CYCGRG 2 cut(s) 438, 2787
EcoICRI GAGCTC 2 cut(s) 148, 269
EcoO109I RGGNCCY 2 cut(s) 3239, 4279
EcoRI GAATTC 3 cut(s) 689, 1277, 1860
EcoRV GATATC 1 cut(s) 964
EcoT14I CCWWGG 8 cut(s) 1252, 2014, 2077, 2114, 2587, 2880, 3465, 3703
EcoT22I ATGCAT 3 cut(s) 427, 886, 3808
EcoT38I GRGCYC 2 cut(s) 150, 271
ErhI CCWWGG 8 cut(s) 1252, 2014, 2077, 2114, 2587, 2880, 3465, 3703
Esp3I CGTCTC 1 cut(s) 3630
FalI AAGNNNNNCTT 6 cut(s) 1544, 1576, 2678, 2710, 3509, 3541
FaqI GGGAC 1 cut(s) 498
FauI CCCGC 1 cut(s) 3772
FauNDI CATATG 1 cut(s) 427
FbaI TGATCA 1 cut(s) 927
FblI GTMKAC 4 cut(s) 65, 1248, 1602, 1972
FriOI GRGCYC 2 cut(s) 150, 271
FspBI CTAG 9 cut(s) 42, 479, 837, 921, 2078, 3087, 3168, 3245, 3711
FspI TGCGCA 1 cut(s) 4266
GlaI GCGC 3 cut(s) 93, 2298, 4266
GsaI CCCAGC 1 cut(s) 1831
GsuI CTGGAG 4 cut(s) 79, 1059, 3571, 4095
HaeII RGCGCY 1 cut(s) 2300
HapII CCGG 5 cut(s) 18, 49, 2645, 2724, 2788
HhaI GCGC 3 cut(s) 94, 2299, 4267
Hin6I GCGC 3 cut(s) 92, 2297, 4265
HinP1I GCGC 3 cut(s) 92, 2297, 4265
HincII GTYRAC 2 cut(s) 66, 2212
HindII GTYRAC 2 cut(s) 66, 2212
HindIII AAGCTT 3 cut(s) 638, 3263, 3499
HinfI GANTC 8 cut(s) 396, 472, 504, 851, 1196, 1694, 1880, 2846
HpaII CCGG 5 cut(s) 18, 49, 2645, 2724, 2788
Hpy166II GTNNAC 9 cut(s) 66, 1016, 1249, 1603, 1973, 2212, 2262, 2807, 3379
Hpy8I GTNNAC 9 cut(s) 66, 1016, 1249, 1603, 1973, 2212, 2262, 2807, 3379
Hpy99I CGWCG 2 cut(s) 70, 101
HpyCH4IV ACGT 8 cut(s) 99, 790, 1027, 1261, 1737, 2872, 3071, 3375
HpySE526I ACGT 8 cut(s) 99, 790, 1027, 1261, 1737, 2872, 3071, 3375
HspAI GCGC 3 cut(s) 92, 2297, 4265
KroI GCCGGC 1 cut(s) 48
KroNI GCCGGC 1 cut(s) 50
Ksp22I TGATCA 1 cut(s) 927
LguI GCTCTTC 2 cut(s) 2306, 2576
LweI GCATC 8 cut(s) 412, 867, 871, 1292, 1798, 3073, 3606, 4320
MabI ACCWGGT 1 cut(s) 809
MaeI CTAG 9 cut(s) 42, 479, 837, 921, 2078, 3087, 3168, 3245, 3711
MaeII ACGT 8 cut(s) 99, 790, 1027, 1261, 1737, 2872, 3071, 3375
MaeIII GTNAC 8 cut(s) 670, 1030, 1342, 1589, 2798, 2833, 3314, 4154
MbiI CCGCTC 1 cut(s) 552
MfeI CAATTG 5 cut(s) 1641, 2043, 2166, 3099, 3357
MflI RGATCY 5 cut(s) 649, 868, 1545, 2356, 3469
MhlI GDGCHC 7 cut(s) 150, 271, 445, 1717, 2042, 2204, 2344
MlsI TGGCCA 3 cut(s) 684, 1449, 3993
MluNI TGGCCA 3 cut(s) 684, 1449, 3993
MlyI GAGTC 2 cut(s) 498, 1205
MmeI TCCRAC 6 cut(s) 473, 784, 1033, 2209, 2272, 2947
Mox20I TGGCCA 3 cut(s) 684, 1449, 3993
Mph1103I ATGCAT 3 cut(s) 427, 886, 3808
MroNI GCCGGC 1 cut(s) 48
MroXI GAANNNNTTC 2 cut(s) 3787, 4043
MscI TGGCCA 3 cut(s) 684, 1449, 3993
MslI CAYNNNNRTG 6 cut(s) 750, 902, 1157, 2696, 3056, 3935
Msp20I TGGCCA 3 cut(s) 684, 1449, 3993
MspA1I CMGCKG 4 cut(s) 109, 2796, 3095, 3779
MspCI CTTAAG 2 cut(s) 302, 1660
MspI CCGG 5 cut(s) 18, 49, 2645, 2724, 2788
MunI CAATTG 5 cut(s) 1641, 2043, 2166, 3099, 3357
Mva1269I GAATGC 1 cut(s) 884
MvnI CGCG 1 cut(s) 92
NaeI GCCGGC 1 cut(s) 50
NciI CCSGG 3 cut(s) 2646, 2788, 2789
NcoI CCATGG 1 cut(s) 2114
NdeI CATATG 1 cut(s) 427
NgoMIV GCCGGC 1 cut(s) 48
NheI GCTAGC 1 cut(s) 3710
NlaIV GGNNCC 4 cut(s) 378, 808, 3463, 4280
NmuCI GTSAC 3 cut(s) 670, 1342, 4154
NsbI TGCGCA 1 cut(s) 4266
NsiI ATGCAT 3 cut(s) 427, 886, 3808
NspI RCATGY 3 cut(s) 1560, 2960, 4271
PaeI GCATGC 2 cut(s) 1560, 2960
PaeR7I CTCGAG 1 cut(s) 438
PagI TCATGA 4 cut(s) 888, 1131, 3585, 3879
PaqCI CACCTGC 1 cut(s) 1936
PceI AGGCCT 1 cut(s) 2256
PciSI GCTCTTC 2 cut(s) 2306, 2576
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PctI GAATGC 1 cut(s) 884
PdiI GCCGGC 1 cut(s) 50
PdmI GAANNNNTTC 2 cut(s) 3787, 4043
PfeI GAWTC 6 cut(s) 396, 472, 851, 1694, 1880, 2846
PflMI CCANNNNNTGG 1 cut(s) 4086
PfoI TCCNGGA 1 cut(s) 2974
PleI GAGTC 2 cut(s) 498, 1204
PmaCI CACGTG 1 cut(s) 1262
PmlI CACGTG 1 cut(s) 1262
PpsI GAGTC 2 cut(s) 498, 1204
Ppu21I YACGTR 2 cut(s) 1262, 2873
PpuMI RGGWCCY 2 cut(s) 3239, 4279
PshBI ATTAAT 1 cut(s) 3666
PsiI TTATAA 1 cut(s) 236
Psp124BI GAGCTC 2 cut(s) 150, 271
Psp5II RGGWCCY 2 cut(s) 3239, 4279
PspCI CACGTG 1 cut(s) 1262
PspFI CCCAGC 1 cut(s) 1827
PspN4I GGNNCC 4 cut(s) 378, 808, 3463, 4280
PspPI GGNCC 7 cut(s) 590, 1055, 1256, 1357, 1830, 3239, 4279
PspPPI RGGWCCY 2 cut(s) 3239, 4279
PspXI VCTCGAGB 1 cut(s) 438
PsrI GAACNNNNNNTAC 4 cut(s) 3432, 3464, 3548, 3580
PstNI CAGNNNCTG 3 cut(s) 872, 1193, 1412
PsuI RGATCY 5 cut(s) 649, 868, 1545, 2356, 3469
PvuII CAGCTG 1 cut(s) 3095
RsaI GTAC 9 cut(s) 2238, 3112, 3154, 3450, 3566, 3890, 3917, 3962, 4097
RsaNI GTAC 9 cut(s) 2237, 3111, 3153, 3449, 3565, 3889, 3916, 3961, 4096
RseI CAYNNNNRTG 6 cut(s) 750, 902, 1157, 2696, 3056, 3935
SacI GAGCTC 2 cut(s) 150, 271
SalI GTCGAC 1 cut(s) 64
SapI GCTCTTC 2 cut(s) 2306, 2576
Sau96I GGNCC 7 cut(s) 590, 1055, 1256, 1357, 1830, 3239, 4279
SchI GAGTC 2 cut(s) 498, 1205
SduI GDGCHC 7 cut(s) 150, 271, 445, 1717, 2042, 2204, 2344
SexAI ACCWGGT 1 cut(s) 809
SfaNI GCATC 8 cut(s) 412, 867, 871, 1292, 1798, 3073, 3606, 4320
SfcI CTRYAG 5 cut(s) 162, 1909, 2265, 3024, 3412
Sfr274I CTCGAG 1 cut(s) 438
SinI GGWCC 5 cut(s) 590, 1055, 1357, 3239, 4279
SlaI CTCGAG 1 cut(s) 438
SmaI CCCGGG 1 cut(s) 2789
SmiMI CAYNNNNRTG 6 cut(s) 750, 902, 1157, 2696, 3056, 3935
SmlI CTYRAG 6 cut(s) 302, 438, 944, 1660, 2463, 4027
SmoI CTYRAG 6 cut(s) 302, 438, 944, 1660, 2463, 4027
SnaBI TACGTA 1 cut(s) 2873
SpeI ACTAGT 1 cut(s) 920
SphI GCATGC 2 cut(s) 1560, 2960
SseBI AGGCCT 1 cut(s) 2256
SspI AATATT 2 cut(s) 3393, 4183
SspMI CTAG 9 cut(s) 42, 479, 837, 921, 2078, 3087, 3168, 3245, 3711
SstI GAGCTC 2 cut(s) 150, 271
StuI AGGCCT 1 cut(s) 2256
StyI CCWWGG 8 cut(s) 1252, 2014, 2077, 2114, 2587, 2880, 3465, 3703
TaiI ACGT 8 cut(s) 102, 793, 1030, 1264, 1740, 2875, 3074, 3378
TaqI TCGA 3 cut(s) 65, 439, 2993
TatI WGTACW 2 cut(s) 3152, 3915
TauI GCSGC 5 cut(s) 8, 11, 121, 2730, 4072
TfiI GAWTC 6 cut(s) 396, 472, 851, 1694, 1880, 2846
TscAI CASTG 9 cut(s) 585, 621, 1722, 1878, 2349, 2680, 3130, 3518, 3545
TseFI GTSAC 3 cut(s) 670, 1342, 4154
Tsp45I GTSAC 3 cut(s) 670, 1342, 4154
TspGWI ACGGA 2 cut(s) 1988, 2909
TspMI CCCGGG 1 cut(s) 2787
TspRI CASTG 9 cut(s) 585, 621, 1722, 1878, 2349, 2680, 3130, 3518, 3545
Van91I CCANNNNNTGG 1 cut(s) 4086
Vha464I CTTAAG 2 cut(s) 302, 1660
VpaK11BI GGWCC 5 cut(s) 590, 1055, 1357, 3239, 4279
VspI ATTAAT 1 cut(s) 3666
XapI RAATTY 8 cut(s) 460, 689, 698, 1277, 1286, 1703, 1860, 2180
XbaI TCTAGA 1 cut(s) 836
XceI RCATGY 3 cut(s) 1560, 2960, 4271
XcmI CCANNNNNNNNNTGG 4 cut(s) 1873, 2121, 2503, 3055
XhoI CTCGAG 1 cut(s) 438
XmaI CCCGGG 1 cut(s) 2787
XmaJI CCTAGG 1 cut(s) 2077
XmiI GTMKAC 4 cut(s) 65, 1248, 1602, 1972
XmnI GAANNNNTTC 2 cut(s) 3787, 4043
XspI CTAG 9 cut(s) 42, 479, 837, 921, 2078, 3087, 3168, 3245, 3711
Zsp2I ATGCAT 3 cut(s) 427, 886, 3808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.