AT3G29785

Carboxylesterase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
11612357 .. 11612686
330 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G29785.1

Sequence Viewer

Length: 330 bp
ATGGTTCAACACATGAACGACAAGGTCGATGGTACTAGTTATTCGTTTTGTAGGATGAAAATTGAAGATTATCTGTATGGTAAAAAGTTGCATCAACCGCTGGGAAAGAAGGTAGAGACGATGAGTCAGGATGACTGGAATATTCTTTATAGACAAGTTTTGGATGTTATTAGGTTAACAATATCGAAGAATATCGCGCACAATGTCGCGAAAGAGAAGTCTCCAGACGGGTTGATGAAAGTTCTCTCGGATATATATAAGAAACCTTCTACCAACAATACGGTAATTTCTCATGAAGAAACAATTTCAATTGAAGATGGAAGATGGTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

109

Amino Acids

12.66

Weight (kDa)

7.84

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 197, 209
AciI CCGC 1 cut(s) 98
AfaI GTAC 1 cut(s) 34
AgsI TTSAA 4 cut(s) 8, 65, 309, 314
AhdI GACNNNNNGTC 1 cut(s) 123
AhlI ACTAGT 1 cut(s) 35
Alw26I GTCTC 2 cut(s) 110, 225
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
AspLEI GCGC 1 cut(s) 199
BccI CCATC 3 cut(s) 23, 311, 318
BcoDI GTCTC 2 cut(s) 110, 225
BcuI ACTAGT 1 cut(s) 35
BfaI CTAG 1 cut(s) 36
BmeRI GACNNNNNGTC 1 cut(s) 123
BmsI GCATC 1 cut(s) 100
BpmI CTGGAG 1 cut(s) 207
Bse1I ACTGG 1 cut(s) 140
BseGI GGATG 3 cut(s) 60, 136, 169
BseNI ACTGG 1 cut(s) 140
BseYI CCCAGC 1 cut(s) 100
Bsh1236I CGCG 2 cut(s) 197, 209
BsmAI GTCTC 2 cut(s) 110, 225
BsmBI CGTCTC 1 cut(s) 110
Bsp68I TCGCGA 1 cut(s) 209
BspACI CCGC 1 cut(s) 98
BspFNI CGCG 2 cut(s) 197, 209
BspHI TCATGA 1 cut(s) 292
BsrI ACTGG 1 cut(s) 140
Bst4CI ACNGT 1 cut(s) 283
BstF5I GGATG 3 cut(s) 60, 136, 169
BstFNI CGCG 2 cut(s) 197, 209
BstHHI GCGC 1 cut(s) 199
BstMAI GTCTC 2 cut(s) 110, 225
BstMWI GCNNNNNNNGC 1 cut(s) 97
BstUI CGCG 2 cut(s) 197, 209
BtsCI GGATG 3 cut(s) 60, 136, 169
BtuMI TCGCGA 1 cut(s) 209
CciI TCATGA 1 cut(s) 292
CfoI GCGC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 33
CviAII CATG 2 cut(s) 13, 293
CviQI GTAC 1 cut(s) 33
DriI GACNNNNNGTC 1 cut(s) 123
Eam1105I GACNNNNNGTC 1 cut(s) 123
Esp3I CGTCTC 1 cut(s) 110
FaeI CATG 2 cut(s) 16, 296
FaiI YATR 7 cut(s) 14, 78, 150, 254, 256, 258, 294
FatI CATG 2 cut(s) 12, 292
FokI GGATG 3 cut(s) 67, 143, 176
FspBI CTAG 1 cut(s) 36
GlaI GCGC 1 cut(s) 198
GsaI CCCAGC 1 cut(s) 104
GsuI CTGGAG 1 cut(s) 207
HhaI GCGC 1 cut(s) 199
Hin1II CATG 2 cut(s) 16, 296
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HinfI GANTC 1 cut(s) 124
HpaI GTTAAC 1 cut(s) 177
Hpy166II GTNNAC 1 cut(s) 177
Hpy188I TCNGA 1 cut(s) 250
Hpy188III TCNNGA 4 cut(s) 128, 208, 224, 293
Hpy8I GTNNAC 1 cut(s) 177
HpyAV CCTTC 2 cut(s) 103, 276
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4V TGCA 1 cut(s) 91
HpyF10VI GCNNNNNNNGC 1 cut(s) 97
Hsp92II CATG 2 cut(s) 16, 296
HspAI GCGC 1 cut(s) 197
KspAI GTTAAC 1 cut(s) 177
LpnPI CCDG 4 cut(s) 86, 113, 121, 237
LweI GCATC 1 cut(s) 100
MaeI CTAG 1 cut(s) 36
MboII GAAGA 4 cut(s) 77, 199, 308, 326
MfeI CAATTG 1 cut(s) 309
MluCI AATT 4 cut(s) 60, 285, 303, 309
MlyI GAGTC 1 cut(s) 133
MseI TTAA 1 cut(s) 176
MspA1I CMGCKG 1 cut(s) 100
MunI CAATTG 1 cut(s) 309
MvnI CGCG 2 cut(s) 197, 209
MwoI GCNNNNNNNGC 1 cut(s) 97
NlaIII CATG 2 cut(s) 16, 296
NruI TCGCGA 1 cut(s) 209
PagI TCATGA 1 cut(s) 292
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PflFI GACNNNGTC 1 cut(s) 23
PleI GAGTC 1 cut(s) 132
PpsI GAGTC 1 cut(s) 132
PspFI CCCAGC 1 cut(s) 100
PsyI GACNNNGTC 1 cut(s) 23
RruI TCGCGA 1 cut(s) 209
RsaI GTAC 1 cut(s) 34
RsaNI GTAC 1 cut(s) 33
SaqAI TTAA 1 cut(s) 176
SchI GAGTC 1 cut(s) 133
SetI ASST 4 cut(s) 27, 114, 176, 268
SfaNI GCATC 1 cut(s) 100
SpeI ACTAGT 1 cut(s) 35
Sse9I AATT 4 cut(s) 60, 285, 303, 309
SsiI CCGC 1 cut(s) 98
SspI AATATT 1 cut(s) 142
SspMI CTAG 1 cut(s) 36
TaaI ACNGT 1 cut(s) 283
TaqI TCGA 2 cut(s) 27, 185
TasI AATT 4 cut(s) 60, 285, 303, 309
Tru1I TTAA 1 cut(s) 176
Tru9I TTAA 1 cut(s) 176
TspDTI ATGAA 4 cut(s) 29, 71, 251, 309
Tth111I GACNNNGTC 1 cut(s) 23
XspI CTAG 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.