pycom07g16520

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0000278
Physical Location & Seq
Reverse (-)
18948841 .. 18950580
1740 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g16520.1

Sequence Viewer

Length: 1740 bp
ATGGCTGGAGATAAAGATGAATCTGTAAAGGGGAAGGAGTCGGCATCGTCTTCGTCGGCGTCTACATCCAATAGACATCAAATTGCTACTACAAGGTTAGAGGTTGATAAATTCAATGGCTCTAATAATTTTGGTATGTGGCAATGTGAAGTTATGGATGTGTTGTATCAACAAGAGTTGGATATGGTTCTGGAAGATAAACCAGAAGATATTGATGACAAGCAGTGGACACGAATTAATCTTCATGCTTGTGCTGCTATTCGATCGTTCCTTGATAAGGAGTTGAAATACCCGTATATGAAGGAAACTTCTGCTAAGGAGTTATGGACAAAATTGGAGGAGAAGTATATGACCAAGAGCGCAGAAAATCGGCTCTTCTTGAAGAAGCGACTCTTCCGTTTTCAGTATAGTCCAGGTATTTCTATGCATGAACACCTCAATGATTATAATAAAATACTTGCTGATTTAGCAAACCTTGATGTGAAAATTCCTGACGAGGACAAGGCACTATGTTTGTTAAATTCATTGCCTGATGATTATGATCATTTGACAACTACTTTGTTGTATGGGAAATCCGAGGTGAAACTTGATGAGGTGTCTGCGGCATTGGTGAATCATGAGTGTCGAAAGAAGGAACTAAAGACTCACAATTCACAAACCGAGGCACTTGTTGCAAGGGGTCGAACAGTGGAAAGAAAATATGTGAAGCGGGGAAAATCTCGTTCAAAGTCACGAGGGAAGTTTCCTGCTAAAGATGAATGTGCCTTTTGCCGCCAAAAGGGTCATTGGAAGAGAGACTGCCCCAAATTGAAGAACAAAGAGAAGGAGAAAGCGGGTTCTGAAGCAAATATTGCAAAATCTGGAGATGATGATTTCGAGTTTGCTTTGACTAGTTCATCTGCTGATGGTCACTCCAAGGAGTGGATTTTGGATTCAGGTTGCACCTATCATATATGTCCCATTCGAGAATGGTTTTCTAGCTTCGAGGAGCTGGATGGTGGAGTTGTTTTGATGGGTAATGATAATGCCTGCAAAACACAAGGGATAGGCAAAATCTGTTTGAAGATGCATGATGGAACAGTCAGAGAATTAAGTGATGTTCGGTATGTACCGGATATGAAGAAAAATCTTATCTCACTGGGTGCATTGGAATCCAAGGGTCTCAAGATCACCATGAAGGGTGGAGTTCTTAAAGCTGTTTACGGAGCACTGGTGGTGATGAAAGGTACAAGACGAAATAACTTGTATTTCTTGAAGGGGAGTACAGTTATTGGTGAAGCAGCTGTCACCGAAGCTGCTGACGCAGATAGCACAGACACCACGAGGTTATGGCATATGCGTCTTGGGCATGCTGGTGAAAAAGCGTTGCAAGGATTGGTGAAGCAAGGCTTATTGAAAGGTGCAAAGGCATGCAAATTGGAATTCTGTGAGCATTGTGTGTTGGGTAAGCAAACTAGAGTAAAATTTGGCACTGCTATTCACCACACTAAAGGCATTCTTGATTATGTTCACACTGATGTTTGGGGACCTTCCAAGAATGCATCTTGGGGAGGTAGCCATTATTTTGTCTCCTTTGTTGATGACTTCTCTAGAAGAATATGGGTGTACACCATGAAGCGTAAAGATGAAGTCTTGAAGATATTCCTGAAGTGGAAAAAGATGATTGAAACGCAAAGCGGTCGAAAGATCAAGACTCTCAGATCAGACAATGGGGTGAATATAAGTCTGATCCTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC PAH

Protein Analysis

580

Amino Acids

65.46

Weight (kDa)

9.02

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 70 - 212 4.7e-29 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 308 - 387 1.5e-31 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 414 - 484 9.7e-18 GAG-pre-integrase domain
rve PF00665 503 - 572 2.1e-07 Integrase core domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 447
AccB7I CCANNNNNTGG 1 cut(s) 921
AccI GTMKAC 1 cut(s) 62
AciI CCGC 5 cut(s) 602, 709, 772, 833, 1677
AclWI GGATC 1 cut(s) 1723
AcsI RAATTY 5 cut(s) 110, 486, 520, 1421, 1463
AcuI CTGAAG 2 cut(s) 861, 1667
AcyI GRCGYC 1 cut(s) 59
AdeI CACNNNGTG 1 cut(s) 1142
AfaI GTAC 4 cut(s) 1110, 1228, 1264, 1607
AfiI CCNNNNNNNGG 3 cut(s) 277, 778, 921
AhlI ACTAGT 1 cut(s) 890
AjnI CCWGG 1 cut(s) 412
AluBI AGCT 5 cut(s) 981, 991, 1196, 1283, 1295
AluI AGCT 5 cut(s) 981, 991, 1196, 1283, 1295
Alw21I GWGCWC 1 cut(s) 1210
Alw26I GTCTC 3 cut(s) 789, 1166, 1573
AlwI GGATC 1 cut(s) 1723
ApeKI GCWGC 3 cut(s) 254, 1280, 1295
ApoI RAATTY 5 cut(s) 110, 486, 520, 1421, 1463
ArsI GACNNNNNNTTYG 2 cut(s) 541, 573
AseI ATTAAT 1 cut(s) 237
Asp700I GAANNNNTTC 1 cut(s) 1640
AspLEI GCGC 1 cut(s) 362
AspS9I GGNCC 1 cut(s) 1526
AvaII GGWCC 1 cut(s) 1526
BauI CACGAG 2 cut(s) 732, 1321
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 1210
BbvI GCAGC 3 cut(s) 241, 1282, 1292
BccI CCATC 4 cut(s) 899, 989, 1006, 1067
BcgI CGANNNNNNTGC 4 cut(s) 33, 67, 1661, 1695
BciT130I CCWGG 1 cut(s) 414
BclI TGATCA 1 cut(s) 541
BcoDI GTCTC 3 cut(s) 789, 1166, 1573
BcuI ACTAGT 1 cut(s) 890
BfaI CTAG 4 cut(s) 891, 978, 1455, 1590
BisI GCNGC 5 cut(s) 255, 603, 772, 1281, 1296
BlsI GCNGC 5 cut(s) 256, 604, 773, 1282, 1297
Bme1390I CCNGG 1 cut(s) 414
Bme18I GGWCC 1 cut(s) 1526
BmgT120I GGNCC 1 cut(s) 1526
BmiI GGNNCC 1 cut(s) 1527
BmrFI CCNGG 1 cut(s) 414
BmrI ACTGGG 1 cut(s) 1148
BmsI GCATC 3 cut(s) 53, 1056, 1550
BmuI ACTGGG 1 cut(s) 1148
BpiI GAAGAC 1 cut(s) 42
BpmI CTGGAG 2 cut(s) 27, 882
Bpu10I CCTNAGC 1 cut(s) 315
BpuEI CTTGAG 1 cut(s) 1148
BsaBI GATNNNNATC 1 cut(s) 540
BsaHI GRCGYC 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 1166
BsaJI CCNNGG 4 cut(s) 576, 660, 915, 1155
BsaWI WCCGGW 1 cut(s) 1111
BsaXI ACNNNNNCTCC 4 cut(s) 329, 359, 1197, 1227
Bsc4I CCNNNNNNNGG 3 cut(s) 277, 778, 921
Bse1I ACTGG 2 cut(s) 1143, 1215
Bse3DI GCAATG 2 cut(s) 149, 524
Bse8I GATNNNNATC 1 cut(s) 540
BseBI CCWGG 1 cut(s) 414
BseDI CCNNGG 4 cut(s) 576, 660, 915, 1155
BseGI GGATG 3 cut(s) 65, 163, 1000
BseJI GATNNNNATC 1 cut(s) 540
BseLI CCNNNNNNNGG 3 cut(s) 277, 778, 921
BseMI GCAATG 2 cut(s) 149, 524
BseMII CTCAG 1 cut(s) 1711
BseNI ACTGG 2 cut(s) 1143, 1215
BseRI GAGGAG 2 cut(s) 353, 1001
BseXI GCAGC 3 cut(s) 241, 1282, 1292
Bsh1285I CGRYCG 2 cut(s) 266, 1681
BsiEI CGRYCG 2 cut(s) 266, 1681
BsiHKAI GWGCWC 1 cut(s) 1210
BsiSI CCGG 1 cut(s) 1112
BslFI GGGAC 2 cut(s) 942, 1539
BslI CCNNNNNNNGG 3 cut(s) 277, 778, 921
BsmAI GTCTC 3 cut(s) 789, 1166, 1573
BsmFI GGGAC 2 cut(s) 942, 1539
BsmI GAATGC 2 cut(s) 1494, 1543
Bso31I GGTCTC 1 cut(s) 1166
Bsp1286I GDGCHC 1 cut(s) 1210
Bsp1407I TGTACA 1 cut(s) 1605
Bsp143I GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
BspACI CCGC 5 cut(s) 602, 709, 772, 833, 1677
BspCNI CTCAG 1 cut(s) 1710
BspHI TCATGA 1 cut(s) 616
BspLI GGNNCC 1 cut(s) 1527
BspPI GGATC 1 cut(s) 1723
BspQI GCTCTTC 1 cut(s) 380
BspTNI GGTCTC 1 cut(s) 1166
BsrDI GCAATG 2 cut(s) 149, 524
BsrGI TGTACA 1 cut(s) 1605
BsrI ACTGG 2 cut(s) 1143, 1215
BssECI CCNNGG 4 cut(s) 576, 660, 915, 1155
BssMI GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
BssNI GRCGYC 1 cut(s) 59
BssSI CACGAG 2 cut(s) 732, 1321
BssT1I CCWWGG 2 cut(s) 915, 1155
Bst2BI CACGAG 2 cut(s) 732, 1321
Bst2UI CCWGG 1 cut(s) 414
Bst4CI ACNGT 3 cut(s) 688, 1081, 1267
Bst6I CTCTTC 3 cut(s) 380, 398, 785
BstACI GRCGYC 1 cut(s) 59
BstAPI GCANNNNNTGC 2 cut(s) 671, 851
BstAUI TGTACA 1 cut(s) 1605
BstC8I GCNNGC 3 cut(s) 1030, 1350, 1411
BstDEI CTNAG 2 cut(s) 315, 1697
BstENI CCTNNNNNAGG 1 cut(s) 275
BstF5I GGATG 3 cut(s) 65, 163, 1000
BstHHI GCGC 1 cut(s) 362
BstKTI GATC 6 cut(s) 266, 544, 1170, 1689, 1703, 1731
BstMAI GTCTC 3 cut(s) 789, 1166, 1573
BstMBI GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
BstMCI CGRYCG 2 cut(s) 266, 1681
BstMWI GCNNNNNNNGC 6 cut(s) 254, 467, 671, 851, 1301, 1345
BstNI CCWGG 1 cut(s) 414
BstNSI RCATGY 2 cut(s) 1352, 1413
BstSCI CCNGG 1 cut(s) 412
BstV1I GCAGC 3 cut(s) 241, 1282, 1292
BstV2I GAAGAC 1 cut(s) 42
BtsCI GGATG 3 cut(s) 65, 163, 1000
BtsI GCAGTG 2 cut(s) 230, 1470
BtsIMutI CAGTG 6 cut(s) 230, 693, 1136, 1208, 1470, 1512
Cac8I GCNNGC 3 cut(s) 1030, 1350, 1411
CciI TCATGA 1 cut(s) 616
CfoI GCGC 1 cut(s) 362
Cfr13I GGNCC 1 cut(s) 1526
CseI GACGC 3 cut(s) 48, 1310, 1328
Csp6I GTAC 4 cut(s) 1109, 1227, 1263, 1606
CviAII CATG 8 cut(s) 245, 428, 617, 1070, 1174, 1349, 1410, 1612
CviQI GTAC 4 cut(s) 1109, 1227, 1263, 1606
DdeI CTNAG 2 cut(s) 315, 1697
DpnI GATC 6 cut(s) 265, 543, 1169, 1688, 1702, 1730
DpnII GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
DraIII CACNNNGTG 1 cut(s) 1142
Eam1104I CTCTTC 3 cut(s) 380, 398, 785
EarI CTCTTC 3 cut(s) 380, 398, 785
Eco130I CCWWGG 2 cut(s) 915, 1155
Eco31I GGTCTC 1 cut(s) 1166
Eco47I GGWCC 1 cut(s) 1526
Eco57I CTGAAG 2 cut(s) 861, 1667
EcoNI CCTNNNNNAGG 1 cut(s) 275
EcoO109I RGGNCCY 1 cut(s) 1526
EcoRI GAATTC 1 cut(s) 1421
EcoRII CCWGG 1 cut(s) 412
EcoT14I CCWWGG 2 cut(s) 915, 1155
EcoT22I ATGCAT 3 cut(s) 429, 1071, 1543
ErhI CCWWGG 2 cut(s) 915, 1155
FaeI CATG 8 cut(s) 248, 431, 620, 1073, 1177, 1352, 1413, 1615
FalI AAGNNNNNCTT 6 cut(s) 377, 409, 1373, 1405, 1482, 1514
FaqI GGGAC 2 cut(s) 942, 1539
FatI CATG 8 cut(s) 244, 427, 616, 1069, 1173, 1348, 1409, 1611
FauI CCCGC 2 cut(s) 702, 826
FauNDI CATATG 1 cut(s) 1335
FbaI TGATCA 1 cut(s) 541
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 5 cut(s) 255, 603, 772, 1281, 1296
FokI GGATG 3 cut(s) 52, 170, 1007
Fsp4HI GCNGC 5 cut(s) 255, 603, 772, 1281, 1296
FspBI CTAG 4 cut(s) 891, 978, 1455, 1590
GlaI GCGC 1 cut(s) 361
GluI GCNGC 5 cut(s) 255, 603, 772, 1281, 1296
GsuI CTGGAG 2 cut(s) 27, 882
HapII CCGG 1 cut(s) 1112
HgaI GACGC 3 cut(s) 48, 1310, 1328
HhaI GCGC 1 cut(s) 362
Hin1I GRCGYC 1 cut(s) 59
Hin1II CATG 8 cut(s) 248, 431, 620, 1073, 1177, 1352, 1413, 1615
Hin6I GCGC 1 cut(s) 360
HinP1I GCGC 1 cut(s) 360
HinfI GANTC 8 cut(s) 20, 38, 390, 613, 643, 932, 1151, 1693
HpaII CCGG 1 cut(s) 1112
Hpy166II GTNNAC 6 cut(s) 63, 228, 1201, 1510, 1606, 1608
Hpy188I TCNGA 6 cut(s) 577, 841, 1085, 1700, 1705, 1728
Hpy8I GTNNAC 6 cut(s) 63, 228, 1201, 1510, 1606, 1608
Hpy99I CGWCG 1 cut(s) 58
HpyAV CCTTC 7 cut(s) 28, 295, 625, 817, 1171, 1249, 1539
HpyCH4III ACNGT 3 cut(s) 688, 1081, 1267
HpyF10VI GCNNNNNNNGC 6 cut(s) 254, 467, 671, 851, 1301, 1345
HpyF3I CTNAG 2 cut(s) 315, 1697
Hsp92I GRCGYC 1 cut(s) 59
Hsp92II CATG 8 cut(s) 248, 431, 620, 1073, 1177, 1352, 1413, 1615
HspAI GCGC 1 cut(s) 360
Ksp22I TGATCA 1 cut(s) 541
Kzo9I GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
LguI GCTCTTC 1 cut(s) 380
LmnI GCTCC 2 cut(s) 988, 1205
Lsp1109I GCAGC 3 cut(s) 241, 1282, 1292
LweI GCATC 3 cut(s) 53, 1056, 1550
MaeI CTAG 4 cut(s) 891, 978, 1455, 1590
MaeIII GTNAC 3 cut(s) 729, 908, 1285
MalI GATC 6 cut(s) 265, 543, 1169, 1688, 1702, 1730
MboI GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
MhlI GDGCHC 1 cut(s) 1210
MlyI GAGTC 4 cut(s) 47, 384, 637, 1687
MmeI TCCRAC 1 cut(s) 159
Mph1103I ATGCAT 3 cut(s) 429, 1071, 1543
MroXI GAANNNNTTC 1 cut(s) 1640
MseI TTAA 4 cut(s) 237, 518, 1091, 1191
MslI CAYNNNNRTG 4 cut(s) 249, 438, 1353, 1515
MspA1I CMGCKG 1 cut(s) 1283
MspI CCGG 1 cut(s) 1112
MspR9I CCNGG 1 cut(s) 414
Mva1269I GAATGC 2 cut(s) 1494, 1543
MvaI CCWGG 1 cut(s) 414
MwoI GCNNNNNNNGC 6 cut(s) 254, 467, 671, 851, 1301, 1345
NdeI CATATG 1 cut(s) 1335
NdeII GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
NlaIII CATG 8 cut(s) 248, 431, 620, 1073, 1177, 1352, 1413, 1615
NlaIV GGNNCC 1 cut(s) 1527
NmuCI GTSAC 3 cut(s) 729, 908, 1285
NsiI ATGCAT 3 cut(s) 429, 1071, 1543
NspI RCATGY 2 cut(s) 1352, 1413
PaeI GCATGC 2 cut(s) 1352, 1413
PagI TCATGA 1 cut(s) 616
PciSI GCTCTTC 1 cut(s) 380
PctI GAATGC 2 cut(s) 1494, 1543
PdmI GAANNNNTTC 1 cut(s) 1640
PfeI GAWTC 4 cut(s) 20, 613, 932, 1151
PflMI CCANNNNNTGG 1 cut(s) 921
PkrI GCNGC 5 cut(s) 256, 604, 773, 1282, 1297
Ple19I CGATCG 1 cut(s) 266
PleI GAGTC 4 cut(s) 46, 384, 637, 1687
PpsI GAGTC 4 cut(s) 46, 384, 637, 1687
PpuMI RGGWCCY 1 cut(s) 1526
PshBI ATTAAT 1 cut(s) 237
PsiI TTATAA 1 cut(s) 447
Psp5II RGGWCCY 1 cut(s) 1526
Psp6I CCWGG 1 cut(s) 412
PspGI CCWGG 1 cut(s) 412
PspN4I GGNNCC 1 cut(s) 1527
PspPI GGNCC 1 cut(s) 1526
PspPPI RGGWCCY 1 cut(s) 1526
PvuI CGATCG 1 cut(s) 266
PvuII CAGCTG 1 cut(s) 1283
RsaI GTAC 4 cut(s) 1110, 1228, 1264, 1607
RsaNI GTAC 4 cut(s) 1109, 1227, 1263, 1606
RseI CAYNNNNRTG 4 cut(s) 249, 438, 1353, 1515
SapI GCTCTTC 1 cut(s) 380
SaqAI TTAA 4 cut(s) 237, 518, 1091, 1191
SatI GCNGC 5 cut(s) 255, 603, 772, 1281, 1296
Sau3AI GATC 6 cut(s) 263, 541, 1167, 1686, 1700, 1728
Sau96I GGNCC 1 cut(s) 1526
SchI GAGTC 4 cut(s) 47, 384, 637, 1687
ScrFI CCNGG 1 cut(s) 414
SduI GDGCHC 1 cut(s) 1210
SfaNI GCATC 3 cut(s) 53, 1056, 1550
SinI GGWCC 1 cut(s) 1526
SmiMI CAYNNNNRTG 4 cut(s) 249, 438, 1353, 1515
SmlI CTYRAG 1 cut(s) 1163
SmoI CTYRAG 1 cut(s) 1163
SpeI ACTAGT 1 cut(s) 890
SphI GCATGC 2 cut(s) 1352, 1413
SsiI CCGC 5 cut(s) 602, 709, 772, 833, 1677
SspI AATATT 1 cut(s) 850
SspMI CTAG 4 cut(s) 891, 978, 1455, 1590
StyD4I CCNGG 1 cut(s) 412
StyI CCWWGG 2 cut(s) 915, 1155
TaaI ACNGT 3 cut(s) 688, 1081, 1267
TaqI TCGA 7 cut(s) 262, 625, 682, 876, 964, 984, 1681
TatI WGTACW 2 cut(s) 1262, 1605
TauI GCSGC 2 cut(s) 605, 774
TfiI GAWTC 4 cut(s) 20, 613, 932, 1151
Tru1I TTAA 4 cut(s) 237, 518, 1091, 1191
Tru9I TTAA 4 cut(s) 237, 518, 1091, 1191
TscAI CASTG 6 cut(s) 230, 693, 1143, 1215, 1477, 1519
TseFI GTSAC 3 cut(s) 729, 908, 1285
TseI GCWGC 3 cut(s) 254, 1280, 1295
Tsp45I GTSAC 3 cut(s) 729, 908, 1285
TspGWI ACGGA 2 cut(s) 386, 1218
TspRI CASTG 6 cut(s) 230, 693, 1143, 1215, 1477, 1519
Van91I CCANNNNNTGG 1 cut(s) 921
VpaK11BI GGWCC 1 cut(s) 1526
VspI ATTAAT 1 cut(s) 237
XagI CCTNNNNNAGG 1 cut(s) 275
XapI RAATTY 5 cut(s) 110, 486, 520, 1421, 1463
XbaI TCTAGA 1 cut(s) 1589
XceI RCATGY 2 cut(s) 1352, 1413
XmiI GTMKAC 1 cut(s) 62
XmnI GAANNNNTTC 1 cut(s) 1640
XspI CTAG 4 cut(s) 891, 978, 1455, 1590
Zsp2I ATGCAT 3 cut(s) 429, 1071, 1543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.