disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 108 - 250 | 2.3e-28 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 347 - 426 | 6.7e-32 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 453 - 523 | 6.3e-17 | GAG-pre-integrase domain |
| rve | PF00665 | 542 - 634 | 6.5e-12 | Integrase core domain |
| SH3_retrovirus | PF25597 | 712 - 771 | 1.4e-20 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 854 - 893 | 1.2e-06 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 561 |
| AarI | CACCTGC | 2 cut(s) | 2347, 2831 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2235 |
| Acc36I | ACCTGC | 3 cut(s) | 938, 2347, 2831 |
| AccB1I | GGYRCC | 1 cut(s) | 2461 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 128 |
| AccI | GTMKAC | 2 cut(s) | 176, 2942 |
| AccII | CGCG | 1 cut(s) | 346 |
| AciI | CCGC | 7 cut(s) | 716, 823, 1794, 1910, 1928, 3186, 3200 |
| AclWI | GGATC | 3 cut(s) | 1841, 2165, 2178 |
| AcsI | RAATTY | 6 cut(s) | 224, 600, 634, 1538, 1580, 2252 |
| AcuI | CTGAAG | 6 cut(s) | 773, 975, 1784, 2346, 2390, 3155 |
| AdeI | CACNNNGTG | 1 cut(s) | 1259 |
| AfaI | GTAC | 7 cut(s) | 1227, 1381, 1724, 1945, 2104, 2761, 3106 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 128, 391, 2714 |
| AhlI | ACTAGT | 1 cut(s) | 2411 |
| AjiI | CACGTC | 1 cut(s) | 3121 |
| AjnI | CCWGG | 2 cut(s) | 526, 2707 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2704, 2736 |
| AleI | CACNNNNGTG | 1 cut(s) | 2213 |
| AluBI | AGCT | 9 cut(s) | 1108, 1313, 1400, 1412, 2051, 2189, 2349, 2729, 2978 |
| AluI | AGCT | 9 cut(s) | 1108, 1313, 1400, 1412, 2051, 2189, 2349, 2729, 2978 |
| Alw21I | GWGCWC | 1 cut(s) | 2351 |
| Alw26I | GTCTC | 7 cut(s) | 97, 491, 1283, 1690, 1898, 2652, 3307 |
| AlwI | GGATC | 3 cut(s) | 1841, 2165, 2178 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 953, 2054 |
| ApeKI | GCWGC | 6 cut(s) | 368, 1397, 1412, 2051, 2054, 2288 |
| ApoI | RAATTY | 6 cut(s) | 224, 600, 634, 1538, 1580, 2252 |
| AseI | ATTAAT | 2 cut(s) | 351, 2037 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1757 |
| AspLEI | GCGC | 1 cut(s) | 476 |
| AspS9I | GGNCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| AvaII | GGWCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| BaeGI | GKGCMC | 1 cut(s) | 1327 |
| BamHI | GGATCC | 1 cut(s) | 2170 |
| BanI | GGYRCC | 1 cut(s) | 2461 |
| BanII | GRGCYC | 1 cut(s) | 2351 |
| BauI | CACGAG | 2 cut(s) | 846, 1438 |
| BbsI | GAAGAC | 3 cut(s) | 162, 761, 2378 |
| Bbv12I | GWGCWC | 1 cut(s) | 2351 |
| BbvCI | CCTCAGC | 1 cut(s) | 2007 |
| BbvI | GCAGC | 6 cut(s) | 355, 1399, 1409, 2038, 2041, 2275 |
| BccI | CCATC | 7 cut(s) | 1016, 1106, 1123, 1184, 2037, 2999, 3172 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 153, 187, 1778, 1812 |
| BciT130I | CCWGG | 2 cut(s) | 528, 2709 |
| BciVI | GTATCC | 1 cut(s) | 2216 |
| BclI | TGATCA | 1 cut(s) | 655 |
| BcoDI | GTCTC | 7 cut(s) | 97, 491, 1283, 1690, 1898, 2652, 3307 |
| BcuI | ACTAGT | 1 cut(s) | 2411 |
| BfaI | CTAG | 4 cut(s) | 1008, 1572, 1707, 2412 |
| BfmI | CTRYAG | 2 cut(s) | 2418, 2928 |
| BfuAI | ACCTGC | 3 cut(s) | 938, 2347, 2831 |
| BfuI | GTATCC | 1 cut(s) | 2216 |
| BisI | GCNGC | 7 cut(s) | 369, 717, 1398, 1413, 2052, 2055, 2289 |
| BlsI | GCNGC | 7 cut(s) | 370, 718, 1399, 1414, 2053, 2056, 2290 |
| Bme1390I | CCNGG | 2 cut(s) | 528, 2709 |
| Bme18I | GGWCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| BmgBI | CACGTC | 1 cut(s) | 3121 |
| BmgT120I | GGNCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| BmiI | GGNNCC | 5 cut(s) | 1644, 2172, 2463, 3128, 3184 |
| BmrFI | CCNGG | 2 cut(s) | 528, 2709 |
| BmrI | ACTGGG | 1 cut(s) | 1265 |
| BmsI | GCATC | 3 cut(s) | 173, 1173, 1667 |
| BmuI | ACTGGG | 1 cut(s) | 1265 |
| BpiI | GAAGAC | 3 cut(s) | 162, 761, 2378 |
| BpmI | CTGGAG | 3 cut(s) | 150, 2361, 2913 |
| Bpu10I | CCTNAGC | 2 cut(s) | 429, 2007 |
| BpuEI | CTTGAG | 3 cut(s) | 1265, 1973, 2600 |
| Bsa29I | ATCGAT | 1 cut(s) | 2041 |
| BsaAI | YACGTR | 1 cut(s) | 3104 |
| BsaBI | GATNNNNATC | 1 cut(s) | 654 |
| BsaI | GGTCTC | 1 cut(s) | 1283 |
| BsaJI | CCNNGG | 4 cut(s) | 690, 774, 1290, 2076 |
| BsaWI | WCCGGW | 1 cut(s) | 1228 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 443, 473, 1386, 1416, 2072, 2102, 2886, 2916 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 128, 391, 2714 |
| Bse3DI | GCAATG | 4 cut(s) | 111, 263, 638, 3321 |
| Bse8I | GATNNNNATC | 1 cut(s) | 654 |
| BseBI | CCWGG | 2 cut(s) | 528, 2709 |
| BseCI | ATCGAT | 1 cut(s) | 2041 |
| BseDI | CCNNGG | 4 cut(s) | 690, 774, 1290, 2076 |
| BseGI | GGATG | 9 cut(s) | 109, 179, 190, 277, 1117, 2452, 2773, 3049, 3319 |
| BseJI | GATNNNNATC | 1 cut(s) | 654 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 128, 391, 2714 |
| BseMI | GCAATG | 4 cut(s) | 111, 263, 638, 3321 |
| BseMII | CTCAG | 3 cut(s) | 1828, 1998, 2940 |
| BseRI | GAGGAG | 3 cut(s) | 467, 2359, 2471 |
| BseSI | GKGCMC | 1 cut(s) | 1327 |
| BseXI | GCAGC | 6 cut(s) | 355, 1399, 1409, 2038, 2041, 2275 |
| BseYI | CCCAGC | 1 cut(s) | 2672 |
| Bsh1236I | CGCG | 1 cut(s) | 346 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1798 |
| BshNI | GGYRCC | 1 cut(s) | 2461 |
| BshVI | ATCGAT | 1 cut(s) | 2041 |
| BsiEI | CGRYCG | 1 cut(s) | 1798 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2351 |
| BsiSI | CCGG | 1 cut(s) | 1229 |
| BsiWI | CGTACG | 1 cut(s) | 3104 |
| BslFI | GGGAC | 4 cut(s) | 900, 1059, 1656, 3196 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 128, 391, 2714 |
| BsmAI | GTCTC | 7 cut(s) | 97, 491, 1283, 1690, 1898, 2652, 3307 |
| BsmBI | CGTCTC | 3 cut(s) | 97, 491, 3307 |
| BsmFI | GGGAC | 4 cut(s) | 900, 1059, 1656, 3196 |
| BsmI | GAATGC | 2 cut(s) | 1611, 1660 |
| Bso31I | GGTCTC | 1 cut(s) | 1283 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1327, 2351 |
| Bsp1407I | TGTACA | 1 cut(s) | 1722 |
| Bsp143I | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| Bsp19I | CCATGG | 2 cut(s) | 1290, 2076 |
| BspACI | CCGC | 7 cut(s) | 716, 823, 1794, 1910, 1928, 3186, 3200 |
| BspCNI | CTCAG | 3 cut(s) | 1827, 1999, 2941 |
| BspDI | ATCGAT | 1 cut(s) | 2041 |
| BspFNI | CGCG | 1 cut(s) | 346 |
| BspHI | TCATGA | 1 cut(s) | 730 |
| BspLI | GGNNCC | 5 cut(s) | 1644, 2172, 2463, 3128, 3184 |
| BspMI | ACCTGC | 3 cut(s) | 938, 2347, 2831 |
| BspPI | GGATC | 3 cut(s) | 1841, 2165, 2178 |
| BspT107I | GGYRCC | 1 cut(s) | 2461 |
| BspTNI | GGTCTC | 1 cut(s) | 1283 |
| BsrDI | GCAATG | 4 cut(s) | 111, 263, 638, 3321 |
| BsrGI | TGTACA | 1 cut(s) | 1722 |
| BssECI | CCNNGG | 4 cut(s) | 690, 774, 1290, 2076 |
| BssMI | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| BssSI | CACGAG | 2 cut(s) | 846, 1438 |
| BssT1I | CCWWGG | 2 cut(s) | 1290, 2076 |
| Bst2BI | CACGAG | 2 cut(s) | 846, 1438 |
| Bst2UI | CCWGG | 2 cut(s) | 528, 2709 |
| Bst4CI | ACNGT | 9 cut(s) | 914, 1198, 1897, 1943, 2422, 2748, 2764, 2932, 3059 |
| Bst6I | CTCTTC | 4 cut(s) | 494, 512, 2448, 2628 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 785, 965 |
| BstAUI | TGTACA | 1 cut(s) | 1722 |
| BstBAI | YACGTR | 1 cut(s) | 3104 |
| BstC8I | GCNNGC | 7 cut(s) | 1147, 1467, 1528, 2026, 2049, 2535, 2727 |
| BstDEI | CTNAG | 6 cut(s) | 429, 1272, 1814, 2007, 2949, 3019 |
| BstDSI | CCRYGG | 2 cut(s) | 1290, 2076 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 389 |
| BstF5I | GGATG | 9 cut(s) | 109, 179, 190, 277, 1117, 2452, 2773, 3049, 3319 |
| BstFNI | CGCG | 1 cut(s) | 346 |
| BstHHI | GCGC | 1 cut(s) | 476 |
| BstKTI | GATC | 8 cut(s) | 380, 658, 1287, 1806, 1820, 1849, 2173, 2513 |
| BstMAI | GTCTC | 7 cut(s) | 97, 491, 1283, 1690, 1898, 2652, 3307 |
| BstMBI | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| BstMCI | CGRYCG | 1 cut(s) | 1798 |
| BstNI | CCWGG | 2 cut(s) | 528, 2709 |
| BstNSI | RCATGY | 2 cut(s) | 1469, 1530 |
| BstSCI | CCNGG | 2 cut(s) | 526, 2707 |
| BstSFI | CTRYAG | 2 cut(s) | 2418, 2928 |
| BstSLI | GKGCMC | 1 cut(s) | 1327 |
| BstUI | CGCG | 1 cut(s) | 346 |
| BstV1I | GCAGC | 6 cut(s) | 355, 1399, 1409, 2038, 2041, 2275 |
| BstV2I | GAAGAC | 3 cut(s) | 162, 761, 2378 |
| BstX2I | RGATCY | 1 cut(s) | 2170 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2907 |
| BstYI | RGATCY | 1 cut(s) | 2170 |
| Bsu15I | ATCGAT | 1 cut(s) | 2041 |
| BsuI | GTATCC | 1 cut(s) | 2216 |
| BsuTUI | ATCGAT | 1 cut(s) | 2041 |
| BtgI | CCRYGG | 2 cut(s) | 1290, 2076 |
| BtrI | CACGTC | 1 cut(s) | 3121 |
| BtsCI | GGATG | 9 cut(s) | 109, 179, 190, 277, 1117, 2452, 2773, 3049, 3319 |
| BtsI | GCAGTG | 2 cut(s) | 344, 1587 |
| BtsIMutI | CAGTG | 6 cut(s) | 344, 1253, 1325, 1587, 1629, 2208 |
| BveI | ACCTGC | 3 cut(s) | 938, 2347, 2831 |
| Cac8I | GCNNGC | 7 cut(s) | 1147, 1467, 1528, 2026, 2049, 2535, 2727 |
| CaiI | CAGNNNCTG | 2 cut(s) | 953, 2054 |
| CciI | TCATGA | 1 cut(s) | 730 |
| CfoI | GCGC | 1 cut(s) | 476 |
| Cfr13I | GGNCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| ClaI | ATCGAT | 1 cut(s) | 2041 |
| CseI | GACGC | 3 cut(s) | 352, 1427, 1445 |
| Csp6I | GTAC | 7 cut(s) | 1226, 1380, 1723, 1944, 2103, 2760, 3105 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2340, 2375 |
| CviQI | GTAC | 7 cut(s) | 1226, 1380, 1723, 1944, 2103, 2760, 3105 |
| DdeI | CTNAG | 6 cut(s) | 429, 1272, 1814, 2007, 2949, 3019 |
| DpnI | GATC | 8 cut(s) | 379, 657, 1286, 1805, 1819, 1848, 2172, 2512 |
| DpnII | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| DraIII | CACNNNGTG | 1 cut(s) | 1259 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2235 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2235 |
| Eam1104I | CTCTTC | 4 cut(s) | 494, 512, 2448, 2628 |
| EarI | CTCTTC | 4 cut(s) | 494, 512, 2448, 2628 |
| EciI | GGCGGA | 1 cut(s) | 1943 |
| Ecl136II | GAGCTC | 1 cut(s) | 2349 |
| Eco130I | CCWWGG | 2 cut(s) | 1290, 2076 |
| Eco24I | GRGCYC | 1 cut(s) | 2351 |
| Eco31I | GGTCTC | 1 cut(s) | 1283 |
| Eco47I | GGWCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| Eco53kI | GAGCTC | 1 cut(s) | 2349 |
| Eco57I | CTGAAG | 6 cut(s) | 773, 975, 1784, 2346, 2390, 3155 |
| EcoICRI | GAGCTC | 1 cut(s) | 2349 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 389 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1643 |
| EcoRI | GAATTC | 1 cut(s) | 1538 |
| EcoRII | CCWGG | 2 cut(s) | 526, 2707 |
| EcoT14I | CCWWGG | 2 cut(s) | 1290, 2076 |
| EcoT22I | ATGCAT | 3 cut(s) | 1188, 1660, 2703 |
| EcoT38I | GRGCYC | 1 cut(s) | 2351 |
| ErhI | CCWWGG | 2 cut(s) | 1290, 2076 |
| Esp3I | CGTCTC | 3 cut(s) | 97, 491, 3307 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 491, 523, 1490, 1522, 1599, 1631, 2994, 3026 |
| FaqI | GGGAC | 4 cut(s) | 900, 1059, 1656, 3196 |
| FauI | CCCGC | 1 cut(s) | 816 |
| FauNDI | CATATG | 4 cut(s) | 1015, 1068, 1452, 2560 |
| FbaI | TGATCA | 1 cut(s) | 655 |
| FblI | GTMKAC | 2 cut(s) | 176, 2942 |
| Fnu4HI | GCNGC | 7 cut(s) | 369, 717, 1398, 1413, 2052, 2055, 2289 |
| FokI | GGATG | 9 cut(s) | 116, 166, 177, 284, 1124, 2459, 2780, 3056, 3326 |
| FriOI | GRGCYC | 1 cut(s) | 2351 |
| Fsp4HI | GCNGC | 7 cut(s) | 369, 717, 1398, 1413, 2052, 2055, 2289 |
| FspBI | CTAG | 4 cut(s) | 1008, 1572, 1707, 2412 |
| GlaI | GCGC | 1 cut(s) | 475 |
| GluI | GCNGC | 7 cut(s) | 369, 717, 1398, 1413, 2052, 2055, 2289 |
| GsaI | CCCAGC | 1 cut(s) | 2676 |
| GsuI | CTGGAG | 3 cut(s) | 150, 2361, 2913 |
| HapII | CCGG | 1 cut(s) | 1229 |
| HgaI | GACGC | 3 cut(s) | 352, 1427, 1445 |
| HhaI | GCGC | 1 cut(s) | 476 |
| Hin6I | GCGC | 1 cut(s) | 474 |
| HinP1I | GCGC | 1 cut(s) | 474 |
| HincII | GTYRAC | 2 cut(s) | 2943, 3210 |
| HindII | GTYRAC | 2 cut(s) | 2943, 3210 |
| HpaI | GTTAAC | 1 cut(s) | 3210 |
| HpaII | CCGG | 1 cut(s) | 1229 |
| Hpy166II | GTNNAC | 9 cut(s) | 177, 342, 1627, 1723, 1725, 2096, 2865, 2943, 3210 |
| Hpy8I | GTNNAC | 9 cut(s) | 177, 342, 1627, 1723, 1725, 2096, 2865, 2943, 3210 |
| Hpy99I | CGWCG | 2 cut(s) | 92, 3302 |
| HpyAV | CCTTC | 9 cut(s) | 148, 409, 739, 931, 1656, 2212, 2309, 2511, 2651 |
| HpyCH4III | ACNGT | 9 cut(s) | 914, 1198, 1897, 1943, 2422, 2748, 2764, 2932, 3059 |
| HpyCH4IV | ACGT | 2 cut(s) | 3103, 3120 |
| HpyF3I | CTNAG | 6 cut(s) | 429, 1272, 1814, 2007, 2949, 3019 |
| HpySE526I | ACGT | 2 cut(s) | 3103, 3120 |
| HspAI | GCGC | 1 cut(s) | 474 |
| Ksp22I | TGATCA | 1 cut(s) | 655 |
| KspAI | GTTAAC | 1 cut(s) | 3210 |
| Kzo9I | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| LmnI | GCTCC | 3 cut(s) | 1105, 1394, 2346 |
| Lsp1109I | GCAGC | 6 cut(s) | 355, 1399, 1409, 2038, 2041, 2275 |
| LweI | GCATC | 3 cut(s) | 173, 1173, 1667 |
| MaeI | CTAG | 4 cut(s) | 1008, 1572, 1707, 2412 |
| MaeII | ACGT | 2 cut(s) | 3103, 3120 |
| MaeIII | GTNAC | 7 cut(s) | 843, 1025, 1402, 2272, 2364, 2797, 2968 |
| MalI | GATC | 8 cut(s) | 379, 657, 1286, 1805, 1819, 1848, 2172, 2512 |
| MboI | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| MflI | RGATCY | 1 cut(s) | 2170 |
| MhlI | GDGCHC | 2 cut(s) | 1327, 2351 |
| MlyI | GAGTC | 6 cut(s) | 167, 498, 751, 1804, 2223, 2368 |
| MmeI | TCCRAC | 4 cut(s) | 218, 2148, 2797, 2888 |
| Mph1103I | ATGCAT | 3 cut(s) | 1188, 1660, 2703 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1757 |
| MseI | TTAA | 9 cut(s) | 351, 632, 1208, 1308, 2037, 2298, 2424, 2664, 3209 |
| MspA1I | CMGCKG | 3 cut(s) | 1400, 2051, 3188 |
| MspI | CCGG | 1 cut(s) | 1229 |
| MspR9I | CCNGG | 2 cut(s) | 528, 2709 |
| Mva1269I | GAATGC | 2 cut(s) | 1611, 1660 |
| MvaI | CCWGG | 2 cut(s) | 528, 2709 |
| MvnI | CGCG | 1 cut(s) | 346 |
| NcoI | CCATGG | 2 cut(s) | 1290, 2076 |
| NdeI | CATATG | 4 cut(s) | 1015, 1068, 1452, 2560 |
| NdeII | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| NlaIV | GGNNCC | 5 cut(s) | 1644, 2172, 2463, 3128, 3184 |
| NmuCI | GTSAC | 5 cut(s) | 843, 1025, 1402, 2272, 2968 |
| NsiI | ATGCAT | 3 cut(s) | 1188, 1660, 2703 |
| NspI | RCATGY | 2 cut(s) | 1469, 1530 |
| OliI | CACNNNNGTG | 1 cut(s) | 2213 |
| PaeI | GCATGC | 2 cut(s) | 1469, 1530 |
| PagI | TCATGA | 1 cut(s) | 730 |
| PaqCI | CACCTGC | 2 cut(s) | 2347, 2831 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1939 |
| PctI | GAATGC | 2 cut(s) | 1611, 1660 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1757 |
| PfeI | GAWTC | 8 cut(s) | 143, 727, 1049, 1268, 2740, 2828, 2917, 3085 |
| Pfl23II | CGTACG | 1 cut(s) | 3104 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 128 |
| PfoI | TCCNGGA | 1 cut(s) | 2707 |
| PkrI | GCNGC | 7 cut(s) | 370, 718, 1399, 1414, 2053, 2056, 2290 |
| PleI | GAGTC | 6 cut(s) | 166, 498, 751, 1804, 2223, 2368 |
| PpsI | GAGTC | 6 cut(s) | 166, 498, 751, 1804, 2223, 2368 |
| Ppu21I | YACGTR | 1 cut(s) | 3104 |
| PpuMI | RGGWCCY | 1 cut(s) | 1643 |
| PshBI | ATTAAT | 2 cut(s) | 351, 2037 |
| PsiI | TTATAA | 1 cut(s) | 561 |
| Psp124BI | GAGCTC | 1 cut(s) | 2351 |
| Psp5II | RGGWCCY | 1 cut(s) | 1643 |
| Psp6I | CCWGG | 2 cut(s) | 526, 2707 |
| PspFI | CCCAGC | 1 cut(s) | 2672 |
| PspGI | CCWGG | 2 cut(s) | 526, 2707 |
| PspLI | CGTACG | 1 cut(s) | 3104 |
| PspN4I | GGNNCC | 5 cut(s) | 1644, 2172, 2463, 3128, 3184 |
| PspPI | GGNCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| PspPPI | RGGWCCY | 1 cut(s) | 1643 |
| PstNI | CAGNNNCTG | 2 cut(s) | 953, 2054 |
| PsuI | RGATCY | 1 cut(s) | 2170 |
| PvuII | CAGCTG | 2 cut(s) | 1400, 2051 |
| RsaI | GTAC | 7 cut(s) | 1227, 1381, 1724, 1945, 2104, 2761, 3106 |
| RsaNI | GTAC | 7 cut(s) | 1226, 1380, 1723, 1944, 2103, 2760, 3105 |
| SacI | GAGCTC | 1 cut(s) | 2351 |
| SalI | GTCGAC | 1 cut(s) | 2941 |
| SaqAI | TTAA | 9 cut(s) | 351, 632, 1208, 1308, 2037, 2298, 2424, 2664, 3209 |
| SatI | GCNGC | 7 cut(s) | 369, 717, 1398, 1413, 2052, 2055, 2289 |
| Sau3AI | GATC | 8 cut(s) | 377, 655, 1284, 1803, 1817, 1846, 2170, 2510 |
| Sau96I | GGNCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| SchI | GAGTC | 6 cut(s) | 167, 498, 751, 1804, 2223, 2368 |
| ScrFI | CCNGG | 2 cut(s) | 528, 2709 |
| SduI | GDGCHC | 2 cut(s) | 1327, 2351 |
| SfaNI | GCATC | 3 cut(s) | 173, 1173, 1667 |
| SfcI | CTRYAG | 2 cut(s) | 2418, 2928 |
| SinI | GGWCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| SmlI | CTYRAG | 3 cut(s) | 1280, 1952, 2579 |
| SmoI | CTYRAG | 3 cut(s) | 1280, 1952, 2579 |
| SpeI | ACTAGT | 1 cut(s) | 2411 |
| SphI | GCATGC | 2 cut(s) | 1469, 1530 |
| SsiI | CCGC | 7 cut(s) | 716, 823, 1794, 1910, 1928, 3186, 3200 |
| SspI | AATATT | 1 cut(s) | 964 |
| SspMI | CTAG | 4 cut(s) | 1008, 1572, 1707, 2412 |
| SstI | GAGCTC | 1 cut(s) | 2351 |
| StyD4I | CCNGG | 2 cut(s) | 526, 2707 |
| StyI | CCWWGG | 2 cut(s) | 1290, 2076 |
| TaaI | ACNGT | 9 cut(s) | 914, 1198, 1897, 1943, 2422, 2748, 2764, 2932, 3059 |
| TaiI | ACGT | 2 cut(s) | 3106, 3123 |
| TaqI | TCGA | 9 cut(s) | 376, 796, 993, 1798, 2041, 2513, 2539, 2915, 2942 |
| TatI | WGTACW | 3 cut(s) | 1379, 1722, 2102 |
| TauI | GCSGC | 1 cut(s) | 719 |
| TfiI | GAWTC | 8 cut(s) | 143, 727, 1049, 1268, 2740, 2828, 2917, 3085 |
| Tru1I | TTAA | 9 cut(s) | 351, 632, 1208, 1308, 2037, 2298, 2424, 2664, 3209 |
| Tru9I | TTAA | 9 cut(s) | 351, 632, 1208, 1308, 2037, 2298, 2424, 2664, 3209 |
| TscAI | CASTG | 6 cut(s) | 344, 1260, 1332, 1594, 1636, 2215 |
| TseFI | GTSAC | 5 cut(s) | 843, 1025, 1402, 2272, 2968 |
| TseI | GCWGC | 6 cut(s) | 368, 1397, 1412, 2051, 2054, 2288 |
| Tsp45I | GTSAC | 5 cut(s) | 843, 1025, 1402, 2272, 2968 |
| TspGWI | ACGGA | 2 cut(s) | 76, 3286 |
| TspRI | CASTG | 6 cut(s) | 344, 1260, 1332, 1594, 1636, 2215 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 128 |
| VpaK11BI | GGWCC | 4 cut(s) | 1643, 2862, 2897, 3183 |
| VspI | ATTAAT | 2 cut(s) | 351, 2037 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 389 |
| XapI | RAATTY | 6 cut(s) | 224, 600, 634, 1538, 1580, 2252 |
| XbaI | TCTAGA | 1 cut(s) | 1706 |
| XceI | RCATGY | 2 cut(s) | 1469, 1530 |
| XmiI | GTMKAC | 2 cut(s) | 176, 2942 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1757 |
| XspI | CTAG | 4 cut(s) | 1008, 1572, 1707, 2412 |
| Zsp2I | ATGCAT | 3 cut(s) | 1188, 1660, 2703 |