gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 333 |
| AcsI | RAATTY | 2 cut(s) | 372, 406 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 2 cut(s) | 172, 268 |
| AjnI | CCWGG | 1 cut(s) | 298 |
| ApeKI | GCWGC | 1 cut(s) | 140 |
| ApoI | RAATTY | 2 cut(s) | 372, 406 |
| AseI | ATTAAT | 1 cut(s) | 123 |
| AspLEI | GCGC | 1 cut(s) | 248 |
| BbvI | GCAGC | 1 cut(s) | 127 |
| BciT130I | CCWGG | 1 cut(s) | 300 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| Bme1390I | CCNGG | 1 cut(s) | 300 |
| BmrFI | CCNGG | 1 cut(s) | 300 |
| Bpu10I | CCTNAGC | 1 cut(s) | 201 |
| BsaBI | GATNNNNATC | 1 cut(s) | 426 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 215, 245 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bse3DI | GCAATG | 2 cut(s) | 34, 410 |
| Bse8I | GATNNNNATC | 1 cut(s) | 426 |
| BseBI | CCWGG | 1 cut(s) | 300 |
| BseGI | GGATG | 1 cut(s) | 48 |
| BseJI | GATNNNNATC | 1 cut(s) | 426 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMI | GCAATG | 2 cut(s) | 34, 410 |
| BseRI | GAGGAG | 1 cut(s) | 239 |
| BseXI | GCAGC | 1 cut(s) | 127 |
| Bsh1285I | CGRYCG | 1 cut(s) | 152 |
| BsiEI | CGRYCG | 1 cut(s) | 152 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bsp143I | GATC | 2 cut(s) | 149, 427 |
| BspHI | TCATGA | 1 cut(s) | 458 |
| BspQI | GCTCTTC | 1 cut(s) | 266 |
| BsrDI | GCAATG | 2 cut(s) | 34, 410 |
| BssMI | GATC | 2 cut(s) | 149, 427 |
| Bst2UI | CCWGG | 1 cut(s) | 300 |
| Bst6I | CTCTTC | 2 cut(s) | 266, 284 |
| BstDEI | CTNAG | 1 cut(s) | 201 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 48 |
| BstHHI | GCGC | 1 cut(s) | 248 |
| BstKTI | GATC | 2 cut(s) | 152, 430 |
| BstMBI | GATC | 2 cut(s) | 149, 427 |
| BstMCI | CGRYCG | 1 cut(s) | 152 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 140, 353 |
| BstNI | CCWGG | 1 cut(s) | 300 |
| BstSCI | CCNGG | 1 cut(s) | 298 |
| BstV1I | GCAGC | 1 cut(s) | 127 |
| BtsCI | GGATG | 1 cut(s) | 48 |
| BtsI | GCAGTG | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 116 |
| CciI | TCATGA | 1 cut(s) | 458 |
| CfoI | GCGC | 1 cut(s) | 248 |
| CviAII | CATG | 3 cut(s) | 131, 314, 459 |
| CviJI | RGCY | 2 cut(s) | 5, 259 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 259 |
| DdeI | CTNAG | 1 cut(s) | 201 |
| DpnI | GATC | 2 cut(s) | 151, 429 |
| DpnII | GATC | 2 cut(s) | 149, 427 |
| Eam1104I | CTCTTC | 2 cut(s) | 266, 284 |
| EarI | CTCTTC | 2 cut(s) | 266, 284 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 161 |
| EcoRII | CCWGG | 1 cut(s) | 298 |
| EcoT22I | ATGCAT | 1 cut(s) | 315 |
| FaeI | CATG | 3 cut(s) | 134, 317, 462 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 263, 295 |
| FatI | CATG | 3 cut(s) | 130, 313, 458 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| FokI | GGATG | 1 cut(s) | 55 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| GlaI | GCGC | 1 cut(s) | 247 |
| GluI | GCNGC | 1 cut(s) | 141 |
| HhaI | GCGC | 1 cut(s) | 248 |
| Hin1II | CATG | 3 cut(s) | 134, 317, 462 |
| Hin6I | GCGC | 1 cut(s) | 246 |
| HinP1I | GCGC | 1 cut(s) | 246 |
| HinfI | GANTC | 2 cut(s) | 276, 455 |
| Hpy166II | GTNNAC | 1 cut(s) | 114 |
| Hpy188I | TCNGA | 1 cut(s) | 284 |
| Hpy188III | TCNNGA | 4 cut(s) | 77, 265, 377, 459 |
| Hpy8I | GTNNAC | 1 cut(s) | 114 |
| HpyAV | CCTTC | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 1 cut(s) | 313 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 140, 353 |
| HpyF3I | CTNAG | 1 cut(s) | 201 |
| Hsp92II | CATG | 3 cut(s) | 134, 317, 462 |
| HspAI | GCGC | 1 cut(s) | 246 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 2 cut(s) | 149, 427 |
| LguI | GCTCTTC | 1 cut(s) | 266 |
| LpnPI | CCDG | 6 cut(s) | 62, 102, 285, 312, 390, 429 |
| Lsp1109I | GCAGC | 1 cut(s) | 127 |
| MalI | GATC | 2 cut(s) | 151, 429 |
| MboI | GATC | 2 cut(s) | 149, 427 |
| MboII | GAAGA | 6 cut(s) | 92, 104, 119, 253, 271, 280 |
| MluCI | AATT | 5 cut(s) | 12, 120, 218, 372, 406 |
| MlyI | GAGTC | 1 cut(s) | 270 |
| MmeI | TCCRAC | 1 cut(s) | 45 |
| MnlI | CCTC | 3 cut(s) | 217, 332, 376 |
| Mph1103I | ATGCAT | 1 cut(s) | 315 |
| MseI | TTAA | 2 cut(s) | 123, 404 |
| MslI | CAYNNNNRTG | 2 cut(s) | 135, 324 |
| MspR9I | CCNGG | 1 cut(s) | 300 |
| MvaI | CCWGG | 1 cut(s) | 300 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 140, 353 |
| NdeII | GATC | 2 cut(s) | 149, 427 |
| NlaIII | CATG | 3 cut(s) | 134, 317, 462 |
| NsiI | ATGCAT | 1 cut(s) | 315 |
| PagI | TCATGA | 1 cut(s) | 458 |
| PciSI | GCTCTTC | 1 cut(s) | 266 |
| PfeI | GAWTC | 1 cut(s) | 455 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| Ple19I | CGATCG | 1 cut(s) | 152 |
| PleI | GAGTC | 1 cut(s) | 270 |
| PpsI | GAGTC | 1 cut(s) | 270 |
| PshBI | ATTAAT | 1 cut(s) | 123 |
| PsiI | TTATAA | 1 cut(s) | 333 |
| Psp6I | CCWGG | 1 cut(s) | 298 |
| PspGI | CCWGG | 1 cut(s) | 298 |
| PvuI | CGATCG | 1 cut(s) | 152 |
| RseI | CAYNNNNRTG | 2 cut(s) | 135, 324 |
| SapI | GCTCTTC | 1 cut(s) | 266 |
| SaqAI | TTAA | 2 cut(s) | 123, 404 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau3AI | GATC | 2 cut(s) | 149, 427 |
| SchI | GAGTC | 1 cut(s) | 270 |
| ScrFI | CCNGG | 1 cut(s) | 300 |
| SetI | ASST | 3 cut(s) | 304, 324, 363 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 135, 324 |
| Sse9I | AATT | 5 cut(s) | 12, 120, 218, 372, 406 |
| StyD4I | CCNGG | 1 cut(s) | 298 |
| TaqI | TCGA | 1 cut(s) | 148 |
| TasI | AATT | 5 cut(s) | 12, 120, 218, 372, 406 |
| TfiI | GAWTC | 1 cut(s) | 455 |
| Tru1I | TTAA | 2 cut(s) | 123, 404 |
| Tru9I | TTAA | 2 cut(s) | 123, 404 |
| TscAI | CASTG | 1 cut(s) | 116 |
| TseI | GCWGC | 1 cut(s) | 140 |
| TspDTI | ATGAA | 4 cut(s) | 119, 200, 330, 399 |
| TspRI | CASTG | 1 cut(s) | 116 |
| VspI | ATTAAT | 1 cut(s) | 123 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 161 |
| XapI | RAATTY | 2 cut(s) | 372, 406 |
| Zsp2I | ATGCAT | 1 cut(s) | 315 |