FvH4_3g42580

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000278
Physical Location & Seq
Forward (+)
35574124 .. 35581819
7696 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g42580.t1

Sequence Viewer

Length: 1794 bp
ATGACTTGTTGGGCGCTGGTTCCCGACACAATCACATACAATACGATGATTGACGGTTTGTACAAAGCCGGGAGGATGGGAGAGGCACAAAAGCTGACCTCTGAGATGCGAGAGCGCGGGCTACCTCAAGATCTTCAAACTTTCAATATTATACTGCATGGCCTTTGTACCAACAATCAACTTTCTGCAGCAGTGGAAATGCTTAGAGGTATGGAAGCCGACAACACTGTTGATATTGTCACATACAATACTATCATCGAAGCTTTGTGCAAAGCTGGTGACATGGAATGCGCAATGCATTTCTTTTCTGATTTGTCATTGAAAGGAGTAAGGCCTGATGGCTTTACCTACAATATGCTGATCCGGGGGTTTATCCATAAGAATGAGGGATCAAAGGCTTACAATCTTGTTATGGAAATGCTTAAGAGAGGTTACTCTGGAGAGCAAATGACTTTAGATCTGATACAGTTGAAGAAGAACAAGAAAGCAAAGAGCTGTATTGAGTTGCATCTTGCTGATAATGTCTTACTTCACATTGGAGAGACAATGACTGCAAAGGAAGCATGGGAAAAGCTTGAAAGCGTCTATAGGGGTAAAAGCATCGGCAACAAGCTACTCTTGAAGGAACAGCTCTTTGGCCTCAGGATGGAGGAAGGGGATGATCTTAATGATCATATATGCAAGTTCCAGAACTGCATAGCAAACTTGGAGAAGATCGGAGCGAAGATGGATGACGAAGACACGGTTGTTATGCTACTGCATTCGCTGCCACCTTCATTCAAGCACTTCAAAACCACCATGATATTCAAGGAGTCGATCACACTCTCTAAAGTGTGTGAGAACCTGGAATCTTACATCAGATTGGAGAGAGAAGAAGATAGTTCTCAAGCACGGGGACTCTATGTTAGAGGCAAGGAGAGAGGAAGGTCAAGGAATAGAGGTGGTGGATTTCAAGGAATGGGCAGGTCTAAATCCAAGGGAAAAGGCAAAGAAAAGAAAGATGGTTGCTTCATATGTGGTTCACCCGACCACTGGAAAAGGAATTGCAAACAATGGAAGGAGAAGAAGGCGCAGATGTCAGGAGAAAGCTCCCAGTCAGCCAACGTCGTCATTGGATACAATGATGAGGATGGAGAACTCCTTGCAATCTCAACCAGCTCCGGCGCGCCTAGACATTGGACCTTGGATACGGCCTGCACGTTTCATATGTGTGCACACATAGATTGGTTCAACACATATAAGGAAAGGAACACCGGATCAGTTTTGATGGGAAATGATTCACCAAGCAGAATTATGGGAATCGGAACAGTAAGGATCAGAATGCATGATGGCATTGTCAGAACGCTGGGAAACGTTAGACATATCCCAGGCAAGAAGAGTCTTGCCAAGGTGAAGGTTCTTGGAGGTTTTGTTCAGGGTTACTTCAAGAAGATTCAAGATATCCTGAAGGGAGCAGCAATCATTTGGTATCAACTCACCAAGCATGTGAGGCTTGCAAAAATTGCCCTTAGACCTGGTGCTGGCAACATGGTCAATGGGATTCTCCAGAAGCTTGCTTTACTTAAGGAAAGTAACTCTCTTCCTCTACCCAAAGTGGAGGGTGATGATCGCACACAAGCACGTGGTCTTGCCACTCTGGCAAACAGTGGGAAAGGTATTTCAAGAGCTGAGCTTGTGACAAAGCTTAATAAGAGGCATACCAAGATACTTTCTAATATCAGAAGTCTATGGAGAGCCATACTGCTAATCACACCAGTAAGGGAATTGCAAGTATTGGGAGAGCAAAAAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC PAH

Protein Analysis

598

Amino Acids

66.9

Weight (kDa)

9.37

Isoelectric Point (pI)

34.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_1 PF12854 6 - 37 1.1e-09 PPR repeat
PPR_2 PF13041 8 - 56 4.7e-16 PPR repeat family
PPR PF01535 11 - 41 6e-08 PPR repeat
TPR_24 PF23276 11 - 104 7.3e-11 Fungal tetratrico peptide repeats
PPR_1 PF12854 40 - 72 5.3e-06 PPR repeat
PPR_3 PF13812 71 - 122 4.9e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 78 - 125 6.8e-16 PPR repeat family
PPR_1 PF12854 78 - 103 8.3e-09 PPR repeat
Retrotran_gag_2 PF14223 157 - 282 3.4e-31 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 393 - 458 1.4e-19 Pol polyprotein, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 292
Acc36I ACCTGC 1 cut(s) 954
AccII CGCG 2 cut(s) 117, 1166
AciI CCGC 1 cut(s) 117
AclI AACGTT 1 cut(s) 1353
AclWI GGATC 4 cut(s) 355, 397, 1264, 1322
AcuI CTGAAG 1 cut(s) 1466
AcvI CACGTG 1 cut(s) 1622
AfaI GTAC 2 cut(s) 62, 169
AfiI CCNNNNNNNGG 3 cut(s) 646, 1032, 1520
AflII CTTAAG 2 cut(s) 422, 1562
AjnI CCWGG 3 cut(s) 843, 1366, 1513
AjuI GAANNNNNNNTTGG 2 cut(s) 618, 650
AloI GAACNNNNNNTCC 2 cut(s) 1395, 1427
Alw21I GWGCWC 1 cut(s) 1216
Alw26I GTCTC 1 cut(s) 536
Alw44I GTGCAC 1 cut(s) 1212
AlwI GGATC 4 cut(s) 355, 397, 1264, 1322
AoxI GGCC 4 cut(s) 160, 332, 637, 1191
ApaLI GTGCAC 1 cut(s) 1212
ApeKI GCWGC 3 cut(s) 188, 766, 1454
AscI GGCGCGCC 1 cut(s) 1164
Asp700I GAANNNNTTC 1 cut(s) 1276
AspLEI GCGC 6 cut(s) 16, 117, 293, 1072, 1166, 1168
AspS9I GGNCC 1 cut(s) 1179
AsuC2I CCSGG 2 cut(s) 70, 365
AsuHPI GGTGA 6 cut(s) 290, 1014, 1272, 1402, 1468, 1613
AvaII GGWCC 1 cut(s) 1179
AxyI CCTNAGG 1 cut(s) 641
BaeGI GKGCMC 1 cut(s) 1216
BbrPI CACGTG 1 cut(s) 1622
BbsI GAAGAC 1 cut(s) 744
Bbv12I GWGCWC 1 cut(s) 1216
BbvI GCAGC 3 cut(s) 200, 753, 1466
BccI CCATC 8 cut(s) 70, 332, 640, 721, 995, 1124, 1261, 1322
BceAI ACGGC 1 cut(s) 1206
BciT130I CCWGG 3 cut(s) 845, 1368, 1515
BciVI GTATCC 2 cut(s) 1109, 1180
BclI TGATCA 1 cut(s) 670
BcnI CCSGG 2 cut(s) 70, 365
BcoDI GTCTC 1 cut(s) 536
BfaI CTAG 1 cut(s) 1170
BfmI CTRYAG 2 cut(s) 186, 586
BfoI RGCGCY 1 cut(s) 17
BfrI CTTAAG 2 cut(s) 422, 1562
BfuAI ACCTGC 1 cut(s) 954
BfuI GTATCC 2 cut(s) 1109, 1180
BglI GCCNNNNNGGC 1 cut(s) 1637
BglII AGATCT 2 cut(s) 130, 457
BisI GCNGC 3 cut(s) 189, 767, 1455
BlpI GCTNAGC 1 cut(s) 1668
BlsI GCNGC 3 cut(s) 190, 768, 1456
Bme1390I CCNGG 5 cut(s) 70, 365, 845, 1368, 1515
Bme18I GGWCC 1 cut(s) 1179
BmgT120I GGNCC 1 cut(s) 1179
BmiI GGNNCC 1 cut(s) 21
BmrFI CCNGG 5 cut(s) 70, 365, 845, 1368, 1515
BmrI ACTGGG 1 cut(s) 1087
BmsI GCATC 3 cut(s) 96, 517, 609
BmuI ACTGGG 1 cut(s) 1087
BpiI GAAGAC 1 cut(s) 744
BpmI CTGGAG 2 cut(s) 459, 1529
Bpu1102I GCTNAGC 1 cut(s) 1668
BpuEI CTTGAG 2 cut(s) 111, 870
BpuMI CCSGG 2 cut(s) 70, 365
BsaAI YACGTR 1 cut(s) 1622
BsaJI CCNNGG 5 cut(s) 364, 975, 1182, 1366, 1386
BsaWI WCCGGW 1 cut(s) 1253
BsaXI ACNNNNNCTCC 2 cut(s) 1395, 1425
Bsc4I CCNNNNNNNGG 3 cut(s) 646, 1032, 1520
Bse1I ACTGG 3 cut(s) 1037, 1093, 1754
Bse21I CCTNAGG 1 cut(s) 641
Bse3DI GCAATG 1 cut(s) 300
BseBI CCWGG 3 cut(s) 845, 1368, 1515
BseDI CCNNGG 5 cut(s) 364, 975, 1182, 1366, 1386
BseGI GGATG 5 cut(s) 81, 651, 664, 736, 1135
BseLI CCNNNNNNNGG 3 cut(s) 646, 1032, 1520
BseMI GCAATG 1 cut(s) 300
BseMII CTCAG 3 cut(s) 93, 655, 1659
BseNI ACTGG 3 cut(s) 1037, 1093, 1754
BsePI GCGCGC 1 cut(s) 1164
BseSI GKGCMC 1 cut(s) 1216
BseXI GCAGC 3 cut(s) 200, 753, 1466
BseYI CCCAGC 1 cut(s) 1345
BsgI GTGCAG 1 cut(s) 1180
Bsh1236I CGCG 2 cut(s) 117, 1166
BshFI GGCC 4 cut(s) 162, 334, 639, 1193
BsiHKAI GWGCWC 1 cut(s) 1216
BsiSI CCGG 4 cut(s) 69, 364, 1161, 1254
BslFI GGGAC 1 cut(s) 909
BslI CCNNNNNNNGG 3 cut(s) 646, 1032, 1520
BsmAI GTCTC 1 cut(s) 536
BsmFI GGGAC 1 cut(s) 909
BsmI GAATGC 3 cut(s) 293, 760, 1326
BsnI GGCC 4 cut(s) 162, 334, 639, 1193
Bsp1286I GDGCHC 1 cut(s) 1216
Bsp1407I TGTACA 1 cut(s) 60
Bsp1720I GCTNAGC 1 cut(s) 1668
BspACI CCGC 1 cut(s) 117
BspANI GGCC 4 cut(s) 162, 334, 639, 1193
BspCNI CTCAG 3 cut(s) 94, 654, 1660
BspFNI CGCG 2 cut(s) 117, 1166
BspLI GGNNCC 1 cut(s) 21
BspMAI CTGCAG 1 cut(s) 190
BspMI ACCTGC 1 cut(s) 954
BspPI GGATC 4 cut(s) 355, 397, 1264, 1322
BspTI CTTAAG 2 cut(s) 422, 1562
BsrDI GCAATG 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 60
BsrI ACTGG 3 cut(s) 1037, 1093, 1754
BssECI CCNNGG 5 cut(s) 364, 975, 1182, 1366, 1386
BssHII GCGCGC 1 cut(s) 1164
BssT1I CCWWGG 3 cut(s) 975, 1182, 1386
Bst2UI CCWGG 3 cut(s) 845, 1368, 1515
Bst4CI ACNGT 6 cut(s) 56, 229, 468, 745, 1309, 1646
Bst6I CTCTTC 2 cut(s) 1370, 1584
BstAFI CTTAAG 2 cut(s) 422, 1562
BstAPI GCANNNNNTGC 2 cut(s) 766, 1502
BstAUI TGTACA 1 cut(s) 60
BstBAI YACGTR 1 cut(s) 1622
BstC8I GCNNGC 6 cut(s) 119, 1166, 1195, 1494, 1522, 1554
BstDEI CTNAG 5 cut(s) 102, 203, 641, 1508, 1668
BstF5I GGATG 5 cut(s) 81, 651, 664, 736, 1135
BstFNI CGCG 2 cut(s) 117, 1166
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 6 cut(s) 16, 117, 293, 1072, 1166, 1168
BstMAI GTCTC 1 cut(s) 536
BstMWI GCNNNNNNNGC 5 cut(s) 560, 766, 1489, 1502, 1637
BstNI CCWGG 3 cut(s) 845, 1368, 1515
BstNSI RCATGY 1 cut(s) 1487
BstSCI CCNGG 5 cut(s) 68, 363, 843, 1366, 1513
BstSFI CTRYAG 2 cut(s) 186, 586
BstSLI GKGCMC 1 cut(s) 1216
BstUI CGCG 2 cut(s) 117, 1166
BstV1I GCAGC 3 cut(s) 200, 753, 1466
BstV2I GAAGAC 1 cut(s) 744
BstX2I RGATCY 2 cut(s) 130, 457
BstYI RGATCY 2 cut(s) 130, 457
Bsu36I CCTNAGG 1 cut(s) 641
BsuI GTATCC 2 cut(s) 1109, 1180
BsuRI GGCC 4 cut(s) 162, 334, 639, 1193
BtsCI GGATG 5 cut(s) 81, 651, 664, 736, 1135
BtsI GCAGTG 1 cut(s) 198
BtsIMutI CAGTG 4 cut(s) 198, 225, 1030, 1651
BveI ACCTGC 1 cut(s) 954
Cac8I GCNNGC 6 cut(s) 119, 1166, 1195, 1494, 1522, 1554
CfoI GCGC 6 cut(s) 16, 117, 293, 1072, 1166, 1168
Cfr13I GGNCC 1 cut(s) 1179
CseI GACGC 1 cut(s) 571
CsiI ACCWGGT 1 cut(s) 1513
Csp6I GTAC 2 cut(s) 61, 168
CviAII CATG 7 cut(s) 158, 283, 564, 799, 1325, 1484, 1528
CviQI GTAC 2 cut(s) 61, 168
DdeI CTNAG 5 cut(s) 102, 203, 641, 1508, 1668
Eam1104I CTCTTC 2 cut(s) 1370, 1584
EarI CTCTTC 2 cut(s) 1370, 1584
Eco130I CCWWGG 3 cut(s) 975, 1182, 1386
Eco147I AGGCCT 1 cut(s) 334
Eco32I GATATC 1 cut(s) 1441
Eco47I GGWCC 1 cut(s) 1179
Eco57I CTGAAG 1 cut(s) 1466
Eco72I CACGTG 1 cut(s) 1622
Eco81I CCTNAGG 1 cut(s) 641
EcoRII CCWGG 3 cut(s) 843, 1366, 1513
EcoRV GATATC 1 cut(s) 1441
EcoT14I CCWWGG 3 cut(s) 975, 1182, 1386
EcoT22I ATGCAT 2 cut(s) 300, 1326
ErhI CCWWGG 3 cut(s) 975, 1182, 1386
FaeI CATG 7 cut(s) 161, 286, 567, 802, 1328, 1487, 1531
FalI AAGNNNNNCTT 2 cut(s) 602, 634
FaqI GGGAC 1 cut(s) 909
FatI CATG 7 cut(s) 157, 282, 563, 798, 1324, 1483, 1527
FauI CCCGC 1 cut(s) 110
FauNDI CATATG 2 cut(s) 1013, 1206
FbaI TGATCA 1 cut(s) 670
Fnu4HI GCNGC 3 cut(s) 189, 767, 1455
FokI GGATG 5 cut(s) 88, 658, 671, 743, 1142
Fsp4HI GCNGC 3 cut(s) 189, 767, 1455
FspBI CTAG 1 cut(s) 1170
FspI TGCGCA 1 cut(s) 292
GlaI GCGC 6 cut(s) 15, 116, 292, 1071, 1165, 1167
GluI GCNGC 3 cut(s) 189, 767, 1455
GsaI CCCAGC 1 cut(s) 1349
GsuI CTGGAG 2 cut(s) 459, 1529
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 4 cut(s) 162, 334, 639, 1193
HapII CCGG 4 cut(s) 69, 364, 1161, 1254
HgaI GACGC 1 cut(s) 571
HhaI GCGC 6 cut(s) 16, 117, 293, 1072, 1166, 1168
Hin1II CATG 7 cut(s) 161, 286, 567, 802, 1328, 1487, 1531
Hin6I GCGC 6 cut(s) 14, 115, 291, 1070, 1164, 1166
HinP1I GCGC 6 cut(s) 14, 115, 291, 1070, 1164, 1166
HindIII AAGCTT 4 cut(s) 261, 572, 1550, 1682
HinfI GANTC 8 cut(s) 812, 848, 897, 1277, 1299, 1378, 1432, 1540
HpaII CCGG 4 cut(s) 69, 364, 1161, 1254
HphI GGTGA 6 cut(s) 290, 1014, 1272, 1402, 1468, 1613
Hpy166II GTNNAC 2 cut(s) 1022, 1214
Hpy188I TCNGA 9 cut(s) 103, 310, 462, 719, 860, 1304, 1319, 1340, 1721
Hpy8I GTNNAC 2 cut(s) 1022, 1214
Hpy99I CGWCG 1 cut(s) 1109
HpyAV CCTTC 8 cut(s) 616, 647, 783, 918, 1051, 1060, 1387, 1441
HpyCH4III ACNGT 6 cut(s) 56, 229, 468, 745, 1309, 1646
HpyCH4IV ACGT 4 cut(s) 1104, 1199, 1353, 1621
HpyF10VI GCNNNNNNNGC 5 cut(s) 560, 766, 1489, 1502, 1637
HpyF3I CTNAG 5 cut(s) 102, 203, 641, 1508, 1668
HpySE526I ACGT 4 cut(s) 1104, 1199, 1353, 1621
Hsp92II CATG 7 cut(s) 161, 286, 567, 802, 1328, 1487, 1531
HspAI GCGC 6 cut(s) 14, 115, 291, 1070, 1164, 1166
Ksp22I TGATCA 1 cut(s) 670
LmnI GCTCC 4 cut(s) 719, 1094, 1163, 1451
Lsp1109I GCAGC 3 cut(s) 200, 753, 1466
LweI GCATC 3 cut(s) 96, 517, 609
MabI ACCWGGT 1 cut(s) 1513
MaeI CTAG 1 cut(s) 1170
MaeII ACGT 4 cut(s) 1104, 1199, 1353, 1621
MaeIII GTNAC 6 cut(s) 238, 278, 431, 1418, 1571, 1675
MflI RGATCY 2 cut(s) 130, 457
MhlI GDGCHC 1 cut(s) 1216
MluCI AATT 4 cut(s) 1042, 1290, 1500, 1763
MlyI GAGTC 3 cut(s) 821, 891, 1387
Mph1103I ATGCAT 2 cut(s) 300, 1326
MroXI GAANNNNTTC 1 cut(s) 1276
MseI TTAA 4 cut(s) 423, 666, 1563, 1686
MslI CAYNNNNRTG 2 cut(s) 381, 1209
MspCI CTTAAG 2 cut(s) 422, 1562
MspI CCGG 4 cut(s) 69, 364, 1161, 1254
MspR9I CCNGG 5 cut(s) 70, 365, 845, 1368, 1515
Mva1269I GAATGC 3 cut(s) 293, 760, 1326
MvaI CCWGG 3 cut(s) 845, 1368, 1515
MvnI CGCG 2 cut(s) 117, 1166
MwoI GCNNNNNNNGC 5 cut(s) 560, 766, 1489, 1502, 1637
NciI CCSGG 2 cut(s) 70, 365
NdeI CATATG 2 cut(s) 1013, 1206
NlaIII CATG 7 cut(s) 161, 286, 567, 802, 1328, 1487, 1531
NlaIV GGNNCC 1 cut(s) 21
NmuCI GTSAC 3 cut(s) 238, 278, 1675
NsbI TGCGCA 1 cut(s) 292
NsiI ATGCAT 2 cut(s) 300, 1326
NspI RCATGY 1 cut(s) 1487
PalAI GGCGCGCC 1 cut(s) 1164
PauI GCGCGC 1 cut(s) 1164
PceI AGGCCT 1 cut(s) 334
PcsI WCGNNNNNNNCGW 1 cut(s) 1196
PctI GAATGC 3 cut(s) 293, 760, 1326
PdmI GAANNNNTTC 1 cut(s) 1276
PfeI GAWTC 5 cut(s) 848, 1277, 1299, 1432, 1540
PkrI GCNGC 3 cut(s) 190, 768, 1456
PleI GAGTC 3 cut(s) 820, 891, 1386
PmaCI CACGTG 1 cut(s) 1622
PmlI CACGTG 1 cut(s) 1622
PpsI GAGTC 3 cut(s) 820, 891, 1386
Ppu21I YACGTR 1 cut(s) 1622
Psp1406I AACGTT 1 cut(s) 1353
Psp6I CCWGG 3 cut(s) 843, 1366, 1513
PspCI CACGTG 1 cut(s) 1622
PspFI CCCAGC 1 cut(s) 1345
PspGI CCWGG 3 cut(s) 843, 1366, 1513
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 1 cut(s) 1179
PstI CTGCAG 1 cut(s) 190
PsuI RGATCY 2 cut(s) 130, 457
PteI GCGCGC 1 cut(s) 1164
RsaI GTAC 2 cut(s) 62, 169
RsaNI GTAC 2 cut(s) 61, 168
RseI CAYNNNNRTG 2 cut(s) 381, 1209
SaqAI TTAA 4 cut(s) 423, 666, 1563, 1686
SatI GCNGC 3 cut(s) 189, 767, 1455
Sau96I GGNCC 1 cut(s) 1179
SchI GAGTC 3 cut(s) 821, 891, 1387
ScrFI CCNGG 5 cut(s) 70, 365, 845, 1368, 1515
SduI GDGCHC 1 cut(s) 1216
SexAI ACCWGGT 1 cut(s) 1513
SfaNI GCATC 3 cut(s) 96, 517, 609
SfcI CTRYAG 2 cut(s) 186, 586
SgsI GGCGCGCC 1 cut(s) 1164
SinI GGWCC 1 cut(s) 1179
SmiMI CAYNNNNRTG 2 cut(s) 381, 1209
SmlI CTYRAG 4 cut(s) 126, 422, 885, 1562
SmoI CTYRAG 4 cut(s) 126, 422, 885, 1562
Sse9I AATT 4 cut(s) 1042, 1290, 1500, 1763
SseBI AGGCCT 1 cut(s) 334
SsiI CCGC 1 cut(s) 117
SspI AATATT 1 cut(s) 148
SspMI CTAG 1 cut(s) 1170
StuI AGGCCT 1 cut(s) 334
StyD4I CCNGG 5 cut(s) 68, 363, 843, 1366, 1513
StyI CCWWGG 3 cut(s) 975, 1182, 1386
TaaI ACNGT 6 cut(s) 56, 229, 468, 745, 1309, 1646
TaiI ACGT 4 cut(s) 1107, 1202, 1356, 1624
TaqI TCGA 2 cut(s) 258, 815
TasI AATT 4 cut(s) 1042, 1290, 1500, 1763
TatI WGTACW 1 cut(s) 60
TfiI GAWTC 5 cut(s) 848, 1277, 1299, 1432, 1540
Tru1I TTAA 4 cut(s) 423, 666, 1563, 1686
Tru9I TTAA 4 cut(s) 423, 666, 1563, 1686
TscAI CASTG 4 cut(s) 198, 232, 1037, 1651
TseFI GTSAC 3 cut(s) 238, 278, 1675
TseI GCWGC 3 cut(s) 188, 766, 1454
Tsp45I GTSAC 3 cut(s) 238, 278, 1675
TspDTI ATGAA 3 cut(s) 765, 1000, 1193
TspRI CASTG 4 cut(s) 198, 232, 1037, 1651
Vha464I CTTAAG 2 cut(s) 422, 1562
VneI GTGCAC 1 cut(s) 1212
VpaK11BI GGWCC 1 cut(s) 1179
XceI RCATGY 1 cut(s) 1487
XmnI GAANNNNTTC 1 cut(s) 1276
XspI CTAG 1 cut(s) 1170
Zsp2I ATGCAT 2 cut(s) 300, 1326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.