Rorug05G0191700

GDSL esterase lipase At4g26790-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
18633119 .. 18638654
5536 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0191700.1

Sequence Viewer

Length: 3120 bp
ATGGATTACGACCCTCTTCTCCTAACCGACGTCTCTCGCCAGCAAAACACCACCTCCATTTCCACTCACTCCGACTACTCGGTACTGTGCTCGAAATTGAAAAGCTTGACCATGGTGGATCCCGATTCTTCTTGCTCTGAAGCAAATGAAGATTTTGCTCGGGAAAATTGTTATAGCCCAGAAGTTATTAGCACTACAAAATTCAGGGATGCAGTTGCAAATGACGTTCTTGATGGCCGGGCCGTGATAGGATTTTCACTTACATCTCCTGATTTGGTTATGTGTGCTGGGTCACCGGATATACCCCGAACCAGCTGTGTGGAGTCCCCTGAGTTCTTGGAGAGTAGATGCCATCAGAAGCTGGATACTTCGATGGAGCTCTCTTTCGAGAATGGAATCGATGCGTCTCAAGTTAAGGATACTAATAGGACCCCAACTGTGAAGTTCTCCACCACATTGTGCCAAACCTATAAGGAGGATTTGTCTCCTGAAGCTTCATTTGAGCTTCTTCCGCCTATGGTGATTGAGGACAAGTCGAAGGAAGATCCCCTTCTTGATGTAAACAACAATGTAGGTTCTGCAGATGGCTTCCTGGGCAGTGAATCACCTAAAGATGATGGCAATGCCATGTGCGAAGGAGACTATCAGAAGTTGCTAATCGGTTATGAGAACCAGAGAAAGGAATTAGCAGAGATGAGGAGTGCATTCGAGGAGCTCAAAAAGCAGAACCAATCCAAGAATAATGAATGCCGAGAAGCATGGAAGTCTTTAAAGGACCTCCAAAATGAACTCATGCGCAAGTCGATGCATGTTGGATCGTTGGCTTTTGCCATCGAGGGACAGGTGAAAGAGAAAAGCAAGTGGTTTGCATCATTGAGAGATTTGACAAGAAAACTTAAGATTATGAAGATGGACCACATTAAGCTATCAGAGGAGGCATTGGCTTATAAGAACTGTCTTGCAGATATGAACGAGATGAGGTCTACCATTCATTCCGCTTTAAATCAGCAAGTAAGTTTGCATAATGATCTGAAGACCAAGTTTATTGAAGGGGCCAAAGAACGTAAAGAACTCTACAACAAGGTGTTAGAGTTGAAAGGAAACATAAGGGTCTTTTGCAGGTGTAGGCCTCTAAACACTGAGGAAGTTTCAGCAGGAGCTTCAATGGCTATTGACTTTGAATCTGAGAAAGAAGGTGAGCTTGCTGTCAAGTCAAATGGGGTTACAAGAAGGACCTTTAAGTTTGATGCAGTATTCGGCCCTCAAGCAGACCAAGCTGATGTCTTCGAAGACACAGCTCCATTTGCAACCTCAGTTCTAGATGGGTACAATGTCTGCATATTTGCTTACGGGCAGACTGGAAGTGGAAAAACCTTTACAATGGAGGGAACGGAAGAAGCTCGGGGAGTCAATTTTAGGACTCTTGAGCAACTGTTTCGTATAATAAAAGAGCGAGAAAAGTTGCATAGATATGATGTGTCTGTTAGTGTTTTAGAAGTGTACAACGAGCAAATACGGGATCTACTTGTTCCAGGGAATCAGCCAGGAGCAACTGCCAAAAGGCTTGAAATTAGACAAGCTGGAGAAGGGACACATCATGTTCCAGGACTTGTTGAGGCACATGTGAAAAACATGAATGAAGTCTGGGAAGTTCTCCAAACTGGCAGTAATGCAAGGGCTGTTGGCTCAACCAATGCCAATGAGCATAGCAGCCGGTCGCACTGCATACACTGTGTAATGGTGAAGGGGGAGAACTTGTTGAATGGGGAATGCACAAGAAGCAAGCTCTGGTTGGTGGATCTAGCAGGGAGTGAGCGTATAGCAAAGACAGAGGTGCAAGGAGAACGACTCAAGGAAACTCAAAATATCAATAGATCTCTATCTGCACTAGGTGATGTCATATCTGCACTTGCAACTAAAACCTCACACATACCCTTCAGGAACTCCAAGCTAACCCACTTGCTTCAAGACTCTCTAGGTGGAGACTCCAAGACGCTTATGTTTCTTCAAATTAGTCCTAATGAAAATGACTTGAGTGAGACCCTTTGCTCACTGAACTTTGCGAGTAGAGTTAGAGGGATAGAGTTGGGTCCTGCAAAGAGACAAATGGACACTTCTGAACTTTTAAGATACAAACAGATGTATGAGAAAACAAAGCTAGACATCAAGAGCAAAGATGTACAGATAAGGAAGATGGAGGAAACAGTCCATGGGTTAGAACTGAAGATAAGAGAGAGAGACCTGAAAAATAAATGCCTGCAAGACAAGGTGAAAGAATTGGAATCACAACTTTTAATTGAGAGAAAGCTAGCACGTCAGCATGTGGACACAAAAATAGCCGAGCAGCACCTGCAGCAACTGAAACATCAACAAGACGAGCAAACTACTGCACTTGCAAGACCACCTCTAACAAACCGACCATTAACAACTCACAAGATTCTCAATGAGACAGCCATTAATACATTGGGGAAGGACCAAGTAAACCCCACCCAACAACTAACTGAGAAGGCCAACAACAAAATTCCAGTACCTACAATGGATGGTTTTGTCAAGTATATTGATCCTATAGAGAAAGAAAACAACCCCGACATGGCTGAACAATTTGTTCTACCAAAGAGAACTGGAAGAGCCTCTATCTGCCCGACAGTTCAGCGGATTCCTGCTACATCTGCTCCAAGACGCAACTCTCTAATTCCACTCCCTACTGTACCAAACCGCCTCCAATCCCCAATGCCTGTATTATCATTAGCACCAATATCAGCATACCATGCTGATAAGAAAGCTGAAATGGATTATGTGTCTGAAATTGACTGCTTGCCTGAACAGACACCATGTAGTAGTCCTAAAGTTACCAGAACTGGTGGCAAGAAGTTCAACAGCATACTGAGACGAAGCATCCAAAAGAAAGCTCAGATGAAGTCCCCAATGCCGCCACACATGAGAAAAGGTGTGAATGTAGGGATGGAGAAGGTTAGAGTATCTATTGGAAGTCGAGGCAGGATGCCACACAGGGTGTTACTTGGAAATGGTAGAAGGGCAGGTACTAAAGAAGGTCAGAAGCAGATTAGGGAAAAGGAGAGGGGGTGGAACATTGGTACAGCAGGGAGAAATGCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1039

Amino Acids

116.53

Weight (kDa)

8.28

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 352 - 509 8.4e-46 Microtubule binding
Kinesin PF00225 374 - 694 1.5e-116 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 948
AarI CACCTGC 2 cut(s) 1110, 2358
AatII GACGTC 1 cut(s) 33
Acc16I TGCGCA 1 cut(s) 797
Acc36I ACCTGC 3 cut(s) 1110, 2358, 3029
AccI GTMKAC 1 cut(s) 983
AciI CCGC 5 cut(s) 512, 996, 2653, 2716, 2930
AclWI GGATC 7 cut(s) 113, 126, 539, 823, 1527, 1806, 2555
AcoI YGGCCR 1 cut(s) 235
AcsI RAATTY 2 cut(s) 200, 2520
AcuI CTGAAG 5 cut(s) 159, 510, 1052, 1921, 2243
AcyI GRCGYC 1 cut(s) 30
AdeI CACNNNGTG 3 cut(s) 459, 1892, 3013
AfaI GTAC 8 cut(s) 84, 1328, 1502, 2181, 2529, 2709, 3043, 3097
AfiI CCNNNNNNNGG 2 cut(s) 679, 2590
AflII CTTAAG 1 cut(s) 896
AflIII ACRYGT 1 cut(s) 1621
AjiI CACGTC 1 cut(s) 2315
AjnI CCWGG 4 cut(s) 591, 1531, 1543, 1603
Alw21I GWGCWC 3 cut(s) 92, 381, 717
AlwI GGATC 7 cut(s) 113, 126, 539, 823, 1527, 1806, 2555
AlwNI CAGNNNCTG 3 cut(s) 361, 2350, 2359
Ama87I CYCGRG 2 cut(s) 159, 1401
AoxI GGCC 6 cut(s) 235, 240, 1053, 1127, 1258, 2508
ApeKI GCWGC 3 cut(s) 1710, 2344, 2353
ApoI RAATTY 2 cut(s) 200, 2520
AseI ATTAAT 1 cut(s) 2457
AspLEI GCGC 1 cut(s) 798
AspS9I GGNCC 9 cut(s) 240, 429, 775, 913, 1053, 1233, 1259, 2090, 2473
AsuC2I CCSGG 1 cut(s) 239
AsuHPI GGTGA 8 cut(s) 285, 532, 597, 856, 1208, 1753, 1904, 2281
AsuII TTCGAA 1 cut(s) 1287
AsuNHI GCTAGC 1 cut(s) 2308
AvaI CYCGRG 2 cut(s) 159, 1401
AvaII GGWCC 6 cut(s) 429, 775, 913, 1233, 2090, 2473
BamHI GGATCC 1 cut(s) 118
BanII GRGCYC 2 cut(s) 381, 717
BarI GAAGNNNNNNTAC 2 cut(s) 3025, 3057
BbsI GAAGAC 3 cut(s) 1040, 1276, 1296
Bbv12I GWGCWC 3 cut(s) 92, 381, 717
BbvI GCAGC 3 cut(s) 1722, 2356, 2365
BceAI ACGGC 1 cut(s) 227
BcgI CGANNNNNNTGC 2 cut(s) 1418, 1452
BciT130I CCWGG 4 cut(s) 593, 1533, 1545, 1605
BciVI GTATCC 2 cut(s) 358, 412
BcnI CCSGG 1 cut(s) 239
BfaI CTAG 6 cut(s) 1319, 1802, 1889, 1976, 2159, 2309
BfmI CTRYAG 3 cut(s) 579, 2351, 2565
BfrI CTTAAG 1 cut(s) 896
BfuAI ACCTGC 3 cut(s) 1110, 2358, 3029
BfuI GTATCC 2 cut(s) 358, 412
BglII AGATCT 1 cut(s) 1874
BisI GCNGC 4 cut(s) 1711, 2345, 2354, 2930
BlsI GCNGC 4 cut(s) 1712, 2346, 2355, 2931
Bme1390I CCNGG 5 cut(s) 239, 593, 1533, 1545, 1605
Bme18I GGWCC 6 cut(s) 429, 775, 913, 1233, 2090, 2473
BmeT110I CYCGRG 2 cut(s) 159, 1401
BmgBI CACGTC 1 cut(s) 2315
BmgT120I GGNCC 9 cut(s) 240, 429, 775, 913, 1053, 1233, 1259, 2090, 2473
BmiI GGNNCC 4 cut(s) 120, 431, 1054, 2091
BmrFI CCNGG 5 cut(s) 239, 593, 1533, 1545, 1605
BmsI GCATC 8 cut(s) 199, 338, 391, 795, 878, 1237, 2904, 2991
BmtI GCTAGC 1 cut(s) 2312
BpiI GAAGAC 3 cut(s) 1040, 1276, 1296
BplI GAGNNNNNCTC 2 cut(s) 1833, 1865
BpmI CTGGAG 1 cut(s) 1602
Bpu14I TTCGAA 1 cut(s) 1287
BpuEI CTTGAG 5 cut(s) 393, 1248, 1445, 1835, 2053
BpuMI CCSGG 1 cut(s) 239
Bsa29I ATCGAT 1 cut(s) 399
BsaBI GATNNNNATC 1 cut(s) 1879
BsaHI GRCGYC 1 cut(s) 30
BsaI GGTCTC 2 cut(s) 2033, 2232
BsaJI CCNNGG 4 cut(s) 111, 592, 1532, 2209
BsaWI WCCGGW 1 cut(s) 295
Bsc4I CCNNNNNNNGG 2 cut(s) 679, 2590
Bse118I RCCGGY 1 cut(s) 1713
Bse1I ACTGG 5 cut(s) 1363, 1666, 2525, 2626, 2863
Bse3DI GCAATG 1 cut(s) 628
Bse8I GATNNNNATC 1 cut(s) 1879
BseBI CCWGG 4 cut(s) 593, 1533, 1545, 1605
BseCI ATCGAT 1 cut(s) 399
BseDI CCNNGG 4 cut(s) 111, 592, 1532, 2209
BseGI GGATG 5 cut(s) 214, 2545, 2895, 2967, 3006
BseJI GATNNNNATC 1 cut(s) 1879
BseLI CCNNNNNNNGG 2 cut(s) 679, 2590
BseMI GCAATG 1 cut(s) 628
BseMII CTCAG 7 cut(s) 321, 1131, 1176, 1326, 2493, 2876, 2924
BseNI ACTGG 5 cut(s) 1363, 1666, 2525, 2626, 2863
BseRI GAGGAG 3 cut(s) 712, 725, 947
BseXI GCAGC 3 cut(s) 1722, 2356, 2365
BseYI CCCAGC 1 cut(s) 287
BsgI GTGCAG 3 cut(s) 1869, 1890, 2373
Bsh1285I CGRYCG 1 cut(s) 1718
BshFI GGCC 6 cut(s) 237, 242, 1055, 1129, 1260, 2510
BshVI ATCGAT 1 cut(s) 399
BsiEI CGRYCG 1 cut(s) 1718
BsiHKAI GWGCWC 3 cut(s) 92, 381, 717
BsiHKCI CYCGRG 2 cut(s) 159, 1401
BsiSI CCGG 3 cut(s) 238, 296, 1714
BslFI GGGAC 4 cut(s) 310, 852, 1603, 2905
BslI CCNNNNNNNGG 2 cut(s) 679, 2590
BsmBI CGTCTC 3 cut(s) 37, 411, 2881
BsmFI GGGAC 4 cut(s) 310, 852, 1603, 2905
BsmI GAATGC 3 cut(s) 704, 752, 1775
BsnI GGCC 6 cut(s) 237, 242, 1055, 1129, 1260, 2510
Bso31I GGTCTC 2 cut(s) 2033, 2232
BsoBI CYCGRG 2 cut(s) 159, 1401
Bsp119I TTCGAA 1 cut(s) 1287
Bsp1286I GDGCHC 3 cut(s) 92, 381, 717
Bsp1407I TGTACA 2 cut(s) 1500, 2179
Bsp143I GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
Bsp19I CCATGG 2 cut(s) 111, 2209
BspACI CCGC 5 cut(s) 512, 996, 2653, 2716, 2930
BspANI GGCC 6 cut(s) 237, 242, 1055, 1129, 1260, 2510
BspCNI CTCAG 7 cut(s) 322, 1132, 1177, 1325, 2494, 2877, 2923
BspDI ATCGAT 1 cut(s) 399
BspLI GGNNCC 4 cut(s) 120, 431, 1054, 2091
BspMAI CTGCAG 2 cut(s) 583, 2355
BspMI ACCTGC 3 cut(s) 1110, 2358, 3029
BspOI GCTAGC 1 cut(s) 2312
BspPI GGATC 7 cut(s) 113, 126, 539, 823, 1527, 1806, 2555
BspQI GCTCTTC 1 cut(s) 2620
BspT104I TTCGAA 1 cut(s) 1287
BspTI CTTAAG 1 cut(s) 896
BspTNI GGTCTC 2 cut(s) 2033, 2232
BsrDI GCAATG 1 cut(s) 628
BsrFI RCCGGY 1 cut(s) 1713
BsrGI TGTACA 2 cut(s) 1500, 2179
BsrI ACTGG 5 cut(s) 1363, 1666, 2525, 2626, 2863
BssAI RCCGGY 1 cut(s) 1713
BssECI CCNNGG 4 cut(s) 111, 592, 1532, 2209
BssMI GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
BssNI GRCGYC 1 cut(s) 30
BssT1I CCWWGG 2 cut(s) 111, 2209
Bst2UI CCWGG 4 cut(s) 593, 1533, 1545, 1605
Bst4CI ACNGT 8 cut(s) 87, 439, 956, 1434, 1733, 2206, 2647, 2707
Bst6I CTCTTC 2 cut(s) 21, 2620
BstACI GRCGYC 1 cut(s) 30
BstAFI CTTAAG 1 cut(s) 896
BstAPI GCANNNNNTGC 2 cut(s) 2350, 2768
BstAUI TGTACA 2 cut(s) 1500, 2179
BstBI TTCGAA 1 cut(s) 1287
BstC8I GCNNGC 6 cut(s) 41, 1203, 1784, 2258, 2310, 2816
BstDEI CTNAG 7 cut(s) 330, 1140, 1185, 1312, 2502, 2885, 2910
BstDSI CCRYGG 2 cut(s) 111, 2209
BstEII GGTNACC 1 cut(s) 291
BstF5I GGATG 5 cut(s) 214, 2545, 2895, 2967, 3006
BstHHI GCGC 1 cut(s) 798
BstKTI GATC 8 cut(s) 121, 547, 818, 1030, 1522, 1801, 1877, 2563
BstMBI GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
BstMCI CGRYCG 1 cut(s) 1718
BstNI CCWGG 4 cut(s) 593, 1533, 1545, 1605
BstNSI RCATGY 3 cut(s) 812, 1625, 2324
BstPI GGTNACC 1 cut(s) 291
BstSCI CCNGG 5 cut(s) 237, 591, 1531, 1543, 1603
BstSFI CTRYAG 3 cut(s) 579, 2351, 2565
BstV1I GCAGC 3 cut(s) 1722, 2356, 2365
BstV2I GAAGAC 3 cut(s) 1040, 1276, 1296
BstX2I RGATCY 5 cut(s) 118, 544, 1519, 1798, 1874
BstXI CCANNNNNNTGG 1 cut(s) 319
BstYI RGATCY 5 cut(s) 118, 544, 1519, 1798, 1874
Bsu15I ATCGAT 1 cut(s) 399
BsuI GTATCC 2 cut(s) 358, 412
BsuRI GGCC 6 cut(s) 237, 242, 1055, 1129, 1260, 2510
BsuTUI ATCGAT 1 cut(s) 399
BtgI CCRYGG 2 cut(s) 111, 2209
BtrI CACGTC 1 cut(s) 2315
BtsCI GGATG 5 cut(s) 214, 2545, 2895, 2967, 3006
BtsI GCAGTG 2 cut(s) 604, 1720
BtsIMutI CAGTG 5 cut(s) 604, 1137, 1720, 1729, 2051
BveI ACCTGC 3 cut(s) 1110, 2358, 3029
Cac8I GCNNGC 6 cut(s) 41, 1203, 1784, 2258, 2310, 2816
CaiI CAGNNNCTG 3 cut(s) 361, 2350, 2359
CfoI GCGC 1 cut(s) 798
Cfr10I RCCGGY 1 cut(s) 1713
Cfr13I GGNCC 9 cut(s) 240, 429, 775, 913, 1053, 1233, 1259, 2090, 2473
ClaI ATCGAT 1 cut(s) 399
CseI GACGC 3 cut(s) 393, 2002, 2688
Csp6I GTAC 8 cut(s) 83, 1327, 1501, 2180, 2528, 2708, 3042, 3096
CviQI GTAC 8 cut(s) 83, 1327, 1501, 2180, 2528, 2708, 3042, 3096
DdeI CTNAG 7 cut(s) 330, 1140, 1185, 1312, 2502, 2885, 2910
DpnI GATC 8 cut(s) 120, 546, 817, 1029, 1521, 1800, 1876, 2562
DpnII GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
DraI TTTAAA 2 cut(s) 771, 1002
DraIII CACNNNGTG 3 cut(s) 459, 1892, 3013
EaeI YGGCCR 1 cut(s) 235
Eam1104I CTCTTC 2 cut(s) 21, 2620
EarI CTCTTC 2 cut(s) 21, 2620
EciI GGCGGA 1 cut(s) 501
Ecl136II GAGCTC 2 cut(s) 379, 715
Eco130I CCWWGG 2 cut(s) 111, 2209
Eco147I AGGCCT 1 cut(s) 1129
Eco24I GRGCYC 2 cut(s) 381, 717
Eco31I GGTCTC 2 cut(s) 2033, 2232
Eco47I GGWCC 6 cut(s) 429, 775, 913, 1233, 2090, 2473
Eco53kI GAGCTC 2 cut(s) 379, 715
Eco57I CTGAAG 5 cut(s) 159, 510, 1052, 1921, 2243
Eco88I CYCGRG 2 cut(s) 159, 1401
Eco91I GGTNACC 1 cut(s) 291
EcoICRI GAGCTC 2 cut(s) 379, 715
EcoO109I RGGNCCY 4 cut(s) 429, 775, 1233, 2090
EcoO65I GGTNACC 1 cut(s) 291
EcoRII CCWGG 4 cut(s) 591, 1531, 1543, 1603
EcoT14I CCWWGG 2 cut(s) 111, 2209
EcoT22I ATGCAT 1 cut(s) 810
EcoT38I GRGCYC 2 cut(s) 381, 717
ErhI CCWWGG 2 cut(s) 111, 2209
Esp3I CGTCTC 3 cut(s) 37, 411, 2881
FalI AAGNNNNNCTT 4 cut(s) 534, 566, 1185, 1217
FaqI GGGAC 4 cut(s) 310, 852, 1603, 2905
FblI GTMKAC 1 cut(s) 983
Fnu4HI GCNGC 4 cut(s) 1711, 2345, 2354, 2930
FokI GGATG 5 cut(s) 221, 2552, 2882, 2974, 3013
FriOI GRGCYC 2 cut(s) 381, 717
Fsp4HI GCNGC 4 cut(s) 1711, 2345, 2354, 2930
FspBI CTAG 6 cut(s) 1319, 1802, 1889, 1976, 2159, 2309
FspI TGCGCA 1 cut(s) 797
GlaI GCGC 1 cut(s) 797
GluI GCNGC 4 cut(s) 1711, 2345, 2354, 2930
GsaI CCCAGC 1 cut(s) 291
GsuI CTGGAG 1 cut(s) 1602
HaeIII GGCC 6 cut(s) 237, 242, 1055, 1129, 1260, 2510
HapII CCGG 3 cut(s) 238, 296, 1714
HgaI GACGC 3 cut(s) 393, 2002, 2688
HhaI GCGC 1 cut(s) 798
Hin1I GRCGYC 1 cut(s) 30
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HindIII AAGCTT 2 cut(s) 103, 492
HpaII CCGG 3 cut(s) 238, 296, 1714
HphI GGTGA 8 cut(s) 285, 532, 597, 856, 1208, 1753, 1904, 2281
Hpy166II GTNNAC 5 cut(s) 562, 984, 1501, 2326, 2482
Hpy8I GTNNAC 5 cut(s) 562, 984, 1501, 2326, 2482
Hpy99I CGWCG 1 cut(s) 32
HpyCH4III ACNGT 8 cut(s) 87, 439, 956, 1434, 1733, 2206, 2647, 2707
HpyCH4IV ACGT 4 cut(s) 30, 225, 1063, 2314
HpyF3I CTNAG 7 cut(s) 330, 1140, 1185, 1312, 2502, 2885, 2910
HpySE526I ACGT 4 cut(s) 30, 225, 1063, 2314
Hsp92I GRCGYC 1 cut(s) 30
HspAI GCGC 1 cut(s) 796
Kzo9I GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
LguI GCTCTTC 1 cut(s) 2620
LmnI GCTCC 6 cut(s) 376, 712, 1157, 1303, 1547, 2677
Lsp1109I GCAGC 3 cut(s) 1722, 2356, 2365
LweI GCATC 8 cut(s) 199, 338, 391, 795, 878, 1237, 2904, 2991
MaeI CTAG 6 cut(s) 1319, 1802, 1889, 1976, 2159, 2309
MaeII ACGT 4 cut(s) 30, 225, 1063, 2314
MaeIII GTNAC 4 cut(s) 291, 1222, 2848, 3015
MalI GATC 8 cut(s) 120, 546, 817, 1029, 1521, 1800, 1876, 2562
MboI GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
MflI RGATCY 5 cut(s) 118, 544, 1519, 1798, 1874
MhlI GDGCHC 3 cut(s) 92, 381, 717
MlyI GAGTC 6 cut(s) 332, 1414, 1416, 1842, 1964, 1979
MmeI TCCRAC 2 cut(s) 96, 793
Mph1103I ATGCAT 1 cut(s) 810
MslI CAYNNNNRTG 1 cut(s) 1470
MspA1I CMGCKG 2 cut(s) 315, 2653
MspCI CTTAAG 1 cut(s) 896
MspI CCGG 3 cut(s) 238, 296, 1714
MspR9I CCNGG 5 cut(s) 239, 593, 1533, 1545, 1605
Mva1269I GAATGC 3 cut(s) 704, 752, 1775
MvaI CCWGG 4 cut(s) 593, 1533, 1545, 1605
NciI CCSGG 1 cut(s) 239
NcoI CCATGG 2 cut(s) 111, 2209
NdeII GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
NheI GCTAGC 1 cut(s) 2308
NlaIV GGNNCC 4 cut(s) 120, 431, 1054, 2091
NmeAIII GCCGAG 2 cut(s) 776, 2365
NmuCI GTSAC 1 cut(s) 291
NsbI TGCGCA 1 cut(s) 797
NsiI ATGCAT 1 cut(s) 810
NspI RCATGY 3 cut(s) 812, 1625, 2324
NspV TTCGAA 1 cut(s) 1287
PaqCI CACCTGC 2 cut(s) 1110, 2358
PceI AGGCCT 1 cut(s) 1129
PciI ACATGT 1 cut(s) 1621
PciSI GCTCTTC 1 cut(s) 2620
PctI GAATGC 3 cut(s) 704, 752, 1775
PfeI GAWTC 8 cut(s) 125, 396, 602, 1181, 1537, 2282, 2437, 2656
PfoI TCCNGGA 1 cut(s) 1603
PkrI GCNGC 4 cut(s) 1712, 2346, 2355, 2931
PleI GAGTC 6 cut(s) 331, 1414, 1415, 1842, 1964, 1979
PpsI GAGTC 6 cut(s) 331, 1414, 1415, 1842, 1964, 1979
PpuMI RGGWCCY 4 cut(s) 429, 775, 1233, 2090
PscI ACATGT 1 cut(s) 1621
PshBI ATTAAT 1 cut(s) 2457
PsiI TTATAA 1 cut(s) 948
Psp124BI GAGCTC 2 cut(s) 381, 717
Psp5II RGGWCCY 4 cut(s) 429, 775, 1233, 2090
Psp6I CCWGG 4 cut(s) 591, 1531, 1543, 1603
PspEI GGTNACC 1 cut(s) 291
PspFI CCCAGC 1 cut(s) 287
PspGI CCWGG 4 cut(s) 591, 1531, 1543, 1603
PspN4I GGNNCC 4 cut(s) 120, 431, 1054, 2091
PspPI GGNCC 9 cut(s) 240, 429, 775, 913, 1053, 1233, 1259, 2090, 2473
PspPPI RGGWCCY 4 cut(s) 429, 775, 1233, 2090
PstI CTGCAG 2 cut(s) 583, 2355
PstNI CAGNNNCTG 3 cut(s) 361, 2350, 2359
PsuI RGATCY 5 cut(s) 118, 544, 1519, 1798, 1874
PvuII CAGCTG 1 cut(s) 315
RsaI GTAC 8 cut(s) 84, 1328, 1502, 2181, 2529, 2709, 3043, 3097
RsaNI GTAC 8 cut(s) 83, 1327, 1501, 2180, 2528, 2708, 3042, 3096
RseI CAYNNNNRTG 1 cut(s) 1470
SacI GAGCTC 2 cut(s) 381, 717
SapI GCTCTTC 1 cut(s) 2620
SatI GCNGC 4 cut(s) 1711, 2345, 2354, 2930
Sau3AI GATC 8 cut(s) 118, 544, 815, 1027, 1519, 1798, 1874, 2560
Sau96I GGNCC 9 cut(s) 240, 429, 775, 913, 1053, 1233, 1259, 2090, 2473
SchI GAGTC 6 cut(s) 332, 1414, 1416, 1842, 1964, 1979
ScrFI CCNGG 5 cut(s) 239, 593, 1533, 1545, 1605
SduI GDGCHC 3 cut(s) 92, 381, 717
SfaNI GCATC 8 cut(s) 199, 338, 391, 795, 878, 1237, 2904, 2991
SfcI CTRYAG 3 cut(s) 579, 2351, 2565
SfuI TTCGAA 1 cut(s) 1287
SinI GGWCC 6 cut(s) 429, 775, 913, 1233, 2090, 2473
SmiMI CAYNNNNRTG 1 cut(s) 1470
SmlI CTYRAG 6 cut(s) 408, 896, 1263, 1424, 1850, 2032
SmoI CTYRAG 6 cut(s) 408, 896, 1263, 1424, 1850, 2032
SseBI AGGCCT 1 cut(s) 1129
SsiI CCGC 5 cut(s) 512, 996, 2653, 2716, 2930
SspMI CTAG 6 cut(s) 1319, 1802, 1889, 1976, 2159, 2309
SstI GAGCTC 2 cut(s) 381, 717
StuI AGGCCT 1 cut(s) 1129
StyD4I CCNGG 5 cut(s) 237, 591, 1531, 1543, 1603
StyI CCWWGG 2 cut(s) 111, 2209
TaaI ACNGT 8 cut(s) 87, 439, 956, 1434, 1733, 2206, 2647, 2707
TaiI ACGT 4 cut(s) 33, 228, 1066, 2317
TatI WGTACW 2 cut(s) 1500, 2179
TauI GCSGC 1 cut(s) 2932
TfiI GAWTC 8 cut(s) 125, 396, 602, 1181, 1537, 2282, 2437, 2656
TscAI CASTG 5 cut(s) 604, 1144, 1727, 1736, 2058
TseFI GTSAC 1 cut(s) 291
TseI GCWGC 3 cut(s) 1710, 2344, 2353
Tsp45I GTSAC 1 cut(s) 291
TspGWI ACGGA 1 cut(s) 1406
TspRI CASTG 5 cut(s) 604, 1144, 1727, 1736, 2058
Vha464I CTTAAG 1 cut(s) 896
VpaK11BI GGWCC 6 cut(s) 429, 775, 913, 1233, 2090, 2473
VspI ATTAAT 1 cut(s) 2457
XapI RAATTY 2 cut(s) 200, 2520
XbaI TCTAGA 1 cut(s) 1318
XceI RCATGY 3 cut(s) 812, 1625, 2324
XcmI CCANNNNNNNNNTGG 1 cut(s) 2461
XmiI GTMKAC 1 cut(s) 983
XspI CTAG 6 cut(s) 1319, 1802, 1889, 1976, 2159, 2309
ZraI GACGTC 1 cut(s) 31
Zsp2I ATGCAT 1 cut(s) 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.