Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 31 - 123 | 2.1e-20 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 273 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 44, 334 |
| AgsI | TTSAA | 4 cut(s) | 266, 310, 374, 392 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 306, 338 |
| AluBI | AGCT | 4 cut(s) | 183, 262, 301, 319 |
| AluI | AGCT | 4 cut(s) | 183, 262, 301, 319 |
| Alw26I | GTCTC | 2 cut(s) | 98, 224 |
| AoxI | GGCC | 1 cut(s) | 325 |
| AxyI | CCTNAGG | 1 cut(s) | 329 |
| BccI | CCATC | 3 cut(s) | 38, 38, 328 |
| BclI | TGATCA | 1 cut(s) | 358 |
| BcoDI | GTCTC | 2 cut(s) | 98, 224 |
| BfmI | CTRYAG | 1 cut(s) | 274 |
| BmsI | GCATC | 2 cut(s) | 205, 297 |
| BsaI | GGTCTC | 1 cut(s) | 98 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 44, 334 |
| Bse21I | CCTNAGG | 1 cut(s) | 329 |
| BseGI | GGATG | 3 cut(s) | 58, 339, 352 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 44, 334 |
| BseMII | CTCAG | 1 cut(s) | 343 |
| BshFI | GGCC | 1 cut(s) | 327 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 44, 334 |
| BsmAI | GTCTC | 2 cut(s) | 98, 224 |
| BsnI | GGCC | 1 cut(s) | 327 |
| Bso31I | GGTCTC | 1 cut(s) | 98 |
| Bsp143I | GATC | 3 cut(s) | 349, 358, 400 |
| BspANI | GGCC | 1 cut(s) | 327 |
| BspCNI | CTCAG | 1 cut(s) | 342 |
| BspTNI | GGTCTC | 1 cut(s) | 98 |
| BssMI | GATC | 3 cut(s) | 349, 358, 400 |
| BstDEI | CTNAG | 1 cut(s) | 329 |
| BstF5I | GGATG | 3 cut(s) | 58, 339, 352 |
| BstKTI | GATC | 3 cut(s) | 352, 361, 403 |
| BstMAI | GTCTC | 2 cut(s) | 98, 224 |
| BstMBI | GATC | 3 cut(s) | 349, 358, 400 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 248 |
| BstNSI | RCATGY | 1 cut(s) | 142 |
| BstSFI | CTRYAG | 1 cut(s) | 274 |
| Bsu36I | CCTNAGG | 1 cut(s) | 329 |
| BsuRI | GGCC | 1 cut(s) | 327 |
| BtsCI | GGATG | 3 cut(s) | 58, 339, 352 |
| CseI | GACGC | 2 cut(s) | 155, 259 |
| CviAII | CATG | 3 cut(s) | 139, 252, 383 |
| CviJI | RGCY | 7 cut(s) | 116, 130, 183, 262, 301, 319, 327 |
| CviKI_1 | RGCY | 7 cut(s) | 116, 130, 183, 262, 301, 319, 327 |
| DdeI | CTNAG | 1 cut(s) | 329 |
| DpnI | GATC | 3 cut(s) | 351, 360, 402 |
| DpnII | GATC | 3 cut(s) | 349, 358, 400 |
| Eco31I | GGTCTC | 1 cut(s) | 98 |
| Eco81I | CCTNAGG | 1 cut(s) | 329 |
| FaeI | CATG | 3 cut(s) | 142, 255, 386 |
| FaiI | YATR | 5 cut(s) | 140, 253, 363, 365, 384 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 290, 322 |
| FatI | CATG | 3 cut(s) | 138, 251, 382 |
| FbaI | TGATCA | 1 cut(s) | 358 |
| FblI | GTMKAC | 1 cut(s) | 273 |
| FokI | GGATG | 3 cut(s) | 65, 346, 359 |
| HaeIII | GGCC | 1 cut(s) | 327 |
| HgaI | GACGC | 2 cut(s) | 155, 259 |
| Hin1II | CATG | 3 cut(s) | 142, 255, 386 |
| HindIII | AAGCTT | 1 cut(s) | 260 |
| HinfI | GANTC | 2 cut(s) | 94, 396 |
| Hpy166II | GTNNAC | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 307, 331 |
| Hpy8I | GTNNAC | 1 cut(s) | 274 |
| Hpy99I | CGWCG | 1 cut(s) | 113 |
| HpyAV | CCTTC | 2 cut(s) | 304, 335 |
| HpyCH4IV | ACGT | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 2 cut(s) | 196, 242 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 248 |
| HpyF3I | CTNAG | 1 cut(s) | 329 |
| HpySE526I | ACGT | 1 cut(s) | 87 |
| Hsp92II | CATG | 3 cut(s) | 142, 255, 386 |
| Ksp22I | TGATCA | 1 cut(s) | 358 |
| Kzo9I | GATC | 3 cut(s) | 349, 358, 400 |
| LpnPI | CCDG | 3 cut(s) | 104, 262, 316 |
| LweI | GCATC | 2 cut(s) | 205, 297 |
| MaeII | ACGT | 1 cut(s) | 87 |
| MalI | GATC | 3 cut(s) | 351, 360, 402 |
| MboI | GATC | 3 cut(s) | 349, 358, 400 |
| MboII | GAAGA | 4 cut(s) | 88, 94, 172, 175 |
| MlyI | GAGTC | 1 cut(s) | 405 |
| MnlI | CCTC | 4 cut(s) | 66, 106, 331, 338 |
| MseI | TTAA | 1 cut(s) | 354 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 248 |
| NdeII | GATC | 3 cut(s) | 349, 358, 400 |
| NlaIII | CATG | 3 cut(s) | 142, 255, 386 |
| NspI | RCATGY | 1 cut(s) | 142 |
| PfeI | GAWTC | 1 cut(s) | 94 |
| PleI | GAGTC | 1 cut(s) | 404 |
| PpsI | GAGTC | 1 cut(s) | 404 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 115, 147 |
| SaqAI | TTAA | 1 cut(s) | 354 |
| Sau3AI | GATC | 3 cut(s) | 349, 358, 400 |
| SchI | GAGTC | 1 cut(s) | 405 |
| SetI | ASST | 5 cut(s) | 90, 185, 264, 303, 321 |
| SfaNI | GCATC | 2 cut(s) | 205, 297 |
| SfcI | CTRYAG | 1 cut(s) | 274 |
| TaiI | ACGT | 1 cut(s) | 90 |
| TaqI | TCGA | 2 cut(s) | 6, 399 |
| TaqII | GACCGA | 1 cut(s) | 122 |
| TfiI | GAWTC | 1 cut(s) | 94 |
| Tru1I | TTAA | 1 cut(s) | 354 |
| Tru9I | TTAA | 1 cut(s) | 354 |
| TspDTI | ATGAA | 1 cut(s) | 95 |
| XceI | RCATGY | 1 cut(s) | 142 |
| XmiI | GTMKAC | 1 cut(s) | 273 |