FvH4_2g22612

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000278
Physical Location & Seq
Reverse (-)
18561104 .. 18563259
2156 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g22612.t1

Sequence Viewer

Length: 1974 bp
ATGGTAGACAGCAAAGGCATGGTCGAAGCAGAAGATGTGAAATCGTTCATTAAACCCTTAAATGGCAAGGATGACTTCACGCTTTGGCGGAGGAGGATGAAGAGTGTCCTGATTCTACAAGACCTGTATGAGGCTGTTCTCGGGATAGAGAATAAGGCAGTTGATATGGCAGATAAGGTTTGGCAGAAGATGGACAAGAAGGCAAGGAGCACAATAGAGTTGCATCTTGCAGATCATGTACTGGGTCGTGTATTGGATAGTGGAGGTGACAATATGAGCAGCAAAGAGACCTGGGATTATCTTGAGAAGGTTTATGCGGGTAAGGGTCCTATTGGTGAGAATATGGACAGCAACAAGACATTGGACAATGTCAAGGAGGCTGACGCAGATAAATTCTTCTTGAAAGAAAAACTCTATAGTCTTTGGATGGAAGAAGGCGGGGATCTGCAGGAACATCTGAATAAATTTCAGATTTGTGTTGCCAATTTATCAGAGGTGGATGTGCAATATGAAGAAGAGGATAAAGGACTTATGCTGCTAACATCTTTACCAGCTTCATACCAGCAGTTCATCACCACACTCGTTTCCGGTAAGGATTCTCTCAAGTACGATGAGATTACCGAAGCTATTCAATCTTATATTAAGACGAGTAGCGAGACCGAGAGCTCTCAAGGAGGCCTTCAAGTCAAGGGCAAGGAGACAAGTCAGTTGACGAGTAAAGAGGATAAATCTGGTAACAAGGGTACAACAAAATCCAAGAAGAAGTACAAGGAAGGTTGCTTCAAATGTGGTGCTGCAGACCATTTGAAAAGAAACTGCAAAGAAGGGAGGATGGAAGCACAGGTGACGGCAGGGAGTTCAAGCACAGCCAACATAGTCATCAGAAAAGATGAAGATGATTGTGAACTTCTTGTGGTAACGTCCAGCTCCAACGCTTTCAGAGATTGGATTTTGGATACCGGTTGTACATTCCACATGTGTGCAATCCGAGAATGGTTTGACACATTTGAGGAGAGTAGCAGCGGAGAAGTTTTCAGGGGAGATGACTCACCGTGTAGGATCCTATGTATTGGATCAGTAAAAATCAGAATGCATGACGGAGTTGTTAGAAAGCTGGAGAATGTCAGATATATTCCTAAGTTAAGGAAGAACTTGATATCTTTGGGTACTTTGGACAAGGCCGGTCATAGGTATAGCTCTAAAGAAGGAAGACTAAAAGTTATCAAGGGATCACTTGTTGTGATGAAGGGCGACATTCAACCTAACAACGTGTACAAGCTTAAAGGGACTACCATAATAGGTGGAGTTGCGATGTCTGCTGAGGTAAATGACAAGACTGAGCAATGGCAGCAAGGCCTACGGCGCATGAGTCAAAGAGGAATGCAGGAACTCTACAAGGAAAGTAAGGCAGAAGGTGTTGGTGTTTGCAAACTGAACTTCTGCAAGGATGGTACTCTTGGGAAGCAGAAGGTGGCATTCAAGTTGGTAGATTGTGAGAACAAAAGCAAACGATTGCTGGATTATATTCACTCAGAAGTATGGCGCGCAAATCAAGTAAGGCGTATGGGAGGCTTCAAGTACCTTGTTACTTTTCTAGATGATTTTTCAAGGAAGATTTGGGCCTACTTTATGAAGGAGAAATCCGAGGTTCTCTTCAAGGTCAAGAAAGGGAAAAGCAAAGTAGGAAATCTAGAAGGCAGAAAAATCAAGTATTTGAGAAGCAACGGTGGCAGTGAATATAGAATGAAAGGGTTCTTACGGTTTTACAAGGATGAAATCACAAGGTGCATCACGGTGAAAGATAATCTCCAGGAAAACGGGGCTGCTAGAAGGATGAAGAAAACTTTTTTTGAGAAAGAAAGAGGCATGCCGCTGCATGCTGGGTTACCAGACACATTTTGGAAAGAAGCAGTTAACCATGCGTGTTATTTGGTTAATCGGTCACCATCAAAGCAAGAAAAGGGTTCTAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC PAH

Protein Analysis

658

Amino Acids

74.6

Weight (kDa)

9.1

Isoelectric Point (pI)

38.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 33 - 212 3.8e-26 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 316 - 395 2e-27 Pol polyprotein, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 6
AccII CGCG 1 cut(s) 1545
AciI CCGC 5 cut(s) 88, 317, 438, 1023, 1871
AclWI GGATC 5 cut(s) 450, 1054, 1067, 1081, 1237
AcsI RAATTY 2 cut(s) 392, 464
AdeI CACNNNGTG 1 cut(s) 1785
AfaI GTAC 9 cut(s) 240, 608, 745, 767, 967, 1168, 1274, 1453, 1580
AfiI CCNNNNNNNGG 3 cut(s) 62, 130, 1188
AflIII ACRYGT 2 cut(s) 975, 1269
AgeI ACCGGT 1 cut(s) 959
AjnI CCWGG 2 cut(s) 290, 1809
AleI CACNNNNGTG 1 cut(s) 978
AluBI AGCT 7 cut(s) 554, 626, 666, 927, 1114, 1197, 1279
AluI AGCT 7 cut(s) 554, 626, 666, 927, 1114, 1197, 1279
Alw21I GWGCWC 2 cut(s) 212, 668
Alw26I GTCTC 3 cut(s) 281, 650, 692
AlwI GGATC 5 cut(s) 450, 1054, 1067, 1081, 1237
Ama87I CYCGRG 1 cut(s) 140
AoxI GGCC 4 cut(s) 676, 1179, 1354, 1620
ApeKI GCWGC 7 cut(s) 279, 535, 794, 1020, 1348, 1823, 1873
ApoI RAATTY 2 cut(s) 392, 464
ArsI GACNNNNNNTTYG 1 cut(s) 38
AsiGI ACCGGT 1 cut(s) 959
Asp700I GAANNNNTTC 3 cut(s) 44, 627, 1751
AspLEI GCGC 3 cut(s) 1365, 1545, 1547
AspS9I GGNCC 2 cut(s) 326, 1620
AsuHPI GGTGA 7 cut(s) 278, 347, 565, 856, 1041, 1807, 1935
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 1 cut(s) 326
BamHI GGATCC 1 cut(s) 1059
BanII GRGCYC 1 cut(s) 668
BbsI GAAGAC 1 cut(s) 1216
Bbv12I GWGCWC 2 cut(s) 212, 668
BbvCI CCTCAGC 1 cut(s) 1320
BbvI GCAGC 7 cut(s) 291, 522, 781, 1032, 1360, 1810, 1860
BccI CCATC 5 cut(s) 184, 421, 826, 1442, 1954
BceAI ACGGC 2 cut(s) 864, 1376
BciT130I CCWGG 2 cut(s) 292, 1811
BciVI GTATCC 1 cut(s) 949
BcoDI GTCTC 3 cut(s) 281, 650, 692
BfaI CTAG 3 cut(s) 1595, 1691, 1827
BfmI CTRYAG 3 cut(s) 415, 446, 795
BfuI GTATCC 1 cut(s) 949
BisI GCNGC 8 cut(s) 280, 536, 795, 1021, 1349, 1824, 1871, 1874
BlsI GCNGC 8 cut(s) 281, 537, 796, 1022, 1350, 1825, 1872, 1875
Bme1390I CCNGG 2 cut(s) 292, 1811
Bme18I GGWCC 1 cut(s) 326
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 2 cut(s) 326, 1620
BmiI GGNNCC 2 cut(s) 327, 1061
BmrFI CCNGG 2 cut(s) 292, 1811
BmrI ACTGGG 1 cut(s) 251
BmsI GCATC 2 cut(s) 232, 1797
BmuI ACTGGG 1 cut(s) 251
BpiI GAAGAC 1 cut(s) 1216
BpmI CTGGAG 2 cut(s) 1136, 1793
Bpu10I CCTNAGC 1 cut(s) 1320
BpuEI CTTGAG 3 cut(s) 323, 587, 654
BsaI GGTCTC 2 cut(s) 281, 650
BsaJI CCNNGG 2 cut(s) 291, 1644
BsaWI WCCGGW 2 cut(s) 587, 959
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 130, 1188
Bse118I RCCGGY 2 cut(s) 959, 1181
Bse1I ACTGG 1 cut(s) 246
Bse3DI GCAATG 1 cut(s) 1349
BseBI CCWGG 2 cut(s) 292, 1811
BseDI CCNNGG 2 cut(s) 291, 1644
BseGI GGATG 8 cut(s) 76, 102, 432, 505, 837, 1453, 1777, 1839
BseLI CCNNNNNNNGG 3 cut(s) 62, 130, 1188
BseMI GCAATG 1 cut(s) 1349
BseMII CTCAG 3 cut(s) 1311, 1329, 1545
BseNI ACTGG 1 cut(s) 246
BsePI GCGCGC 1 cut(s) 1543
BseRI GAGGAG 2 cut(s) 106, 1025
BseXI GCAGC 7 cut(s) 291, 522, 781, 1032, 1360, 1810, 1860
BseYI CCCAGC 1 cut(s) 1880
Bsh1236I CGCG 1 cut(s) 1545
BshFI GGCC 4 cut(s) 678, 1181, 1356, 1622
BshTI ACCGGT 1 cut(s) 959
BsiHKAI GWGCWC 2 cut(s) 212, 668
BsiHKCI CYCGRG 1 cut(s) 140
BsiSI CCGG 3 cut(s) 588, 960, 1182
BslFI GGGAC 1 cut(s) 1300
BslI CCNNNNNNNGG 3 cut(s) 62, 130, 1188
BsmAI GTCTC 3 cut(s) 281, 650, 692
BsmFI GGGAC 1 cut(s) 1300
BsmI GAATGC 3 cut(s) 1095, 1386, 1475
BsnI GGCC 4 cut(s) 678, 1181, 1356, 1622
Bso31I GGTCTC 2 cut(s) 281, 650
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 2 cut(s) 212, 668
Bsp1407I TGTACA 2 cut(s) 965, 1272
Bsp143I GATC 5 cut(s) 232, 442, 1059, 1073, 1229
BspACI CCGC 5 cut(s) 88, 317, 438, 1023, 1871
BspANI GGCC 4 cut(s) 678, 1181, 1356, 1622
BspCNI CTCAG 3 cut(s) 1312, 1330, 1544
BspFNI CGCG 1 cut(s) 1545
BspLI GGNNCC 2 cut(s) 327, 1061
BspMAI CTGCAG 2 cut(s) 450, 799
BspPI GGATC 5 cut(s) 450, 1054, 1067, 1081, 1237
BspTNI GGTCTC 2 cut(s) 281, 650
BsrDI GCAATG 1 cut(s) 1349
BsrFI RCCGGY 2 cut(s) 959, 1181
BsrGI TGTACA 2 cut(s) 965, 1272
BsrI ACTGG 1 cut(s) 246
BssAI RCCGGY 2 cut(s) 959, 1181
BssECI CCNNGG 2 cut(s) 291, 1644
BssHII GCGCGC 1 cut(s) 1543
BssMI GATC 5 cut(s) 232, 442, 1059, 1073, 1229
Bst2UI CCWGG 2 cut(s) 292, 1811
Bst4CI ACNGT 4 cut(s) 1053, 1727, 1761, 1795
Bst6I CTCTTC 3 cut(s) 95, 510, 1658
BstAUI TGTACA 2 cut(s) 965, 1272
BstC8I GCNNGC 3 cut(s) 1545, 1868, 1878
BstDEI CTNAG 5 cut(s) 1137, 1320, 1338, 1531, 1968
BstEII GGTNACC 2 cut(s) 1884, 1941
BstENI CCTNNNNNAGG 1 cut(s) 128
BstF5I GGATG 8 cut(s) 76, 102, 432, 505, 837, 1453, 1777, 1839
BstFNI CGCG 1 cut(s) 1545
BstHHI GCGC 3 cut(s) 1365, 1545, 1547
BstKTI GATC 5 cut(s) 235, 445, 1062, 1076, 1232
BstMAI GTCTC 3 cut(s) 281, 650, 692
BstMBI GATC 5 cut(s) 232, 442, 1059, 1073, 1229
BstMWI GCNNNNNNNGC 4 cut(s) 1316, 1348, 1362, 1728
BstNI CCWGG 2 cut(s) 292, 1811
BstNSI RCATGY 3 cut(s) 979, 1870, 1880
BstPI GGTNACC 2 cut(s) 1884, 1941
BstSCI CCNGG 2 cut(s) 290, 1809
BstSFI CTRYAG 3 cut(s) 415, 446, 795
BstUI CGCG 1 cut(s) 1545
BstV1I GCAGC 7 cut(s) 291, 522, 781, 1032, 1360, 1810, 1860
BstV2I GAAGAC 1 cut(s) 1216
BstX2I RGATCY 2 cut(s) 442, 1059
BstYI RGATCY 2 cut(s) 442, 1059
BsuI GTATCC 1 cut(s) 949
BsuRI GGCC 4 cut(s) 678, 1181, 1356, 1622
BtgZI GCGATG 1 cut(s) 1325
BtsCI GGATG 8 cut(s) 76, 102, 432, 505, 837, 1453, 1777, 1839
BtsI GCAGTG 1 cut(s) 1738
BtsIMutI CAGTG 1 cut(s) 1738
Cac8I GCNNGC 3 cut(s) 1545, 1868, 1878
CfoI GCGC 3 cut(s) 1365, 1545, 1547
Cfr10I RCCGGY 2 cut(s) 959, 1181
Cfr13I GGNCC 2 cut(s) 326, 1620
CseI GACGC 1 cut(s) 392
Csp6I GTAC 9 cut(s) 239, 607, 744, 766, 966, 1167, 1273, 1452, 1579
CspAI ACCGGT 1 cut(s) 959
CviAII CATG 8 cut(s) 19, 236, 976, 1094, 1366, 1867, 1877, 1919
CviQI GTAC 9 cut(s) 239, 607, 744, 766, 966, 1167, 1273, 1452, 1579
DdeI CTNAG 5 cut(s) 1137, 1320, 1338, 1531, 1968
DpnI GATC 5 cut(s) 234, 444, 1061, 1075, 1231
DpnII GATC 5 cut(s) 232, 442, 1059, 1073, 1229
DraIII CACNNNGTG 1 cut(s) 1785
Eam1104I CTCTTC 3 cut(s) 95, 510, 1658
EarI CTCTTC 3 cut(s) 95, 510, 1658
EciI GGCGGA 1 cut(s) 103
Ecl136II GAGCTC 1 cut(s) 666
Eco147I AGGCCT 2 cut(s) 678, 1356
Eco24I GRGCYC 1 cut(s) 668
Eco31I GGTCTC 2 cut(s) 281, 650
Eco32I GATATC 1 cut(s) 1158
Eco47I GGWCC 1 cut(s) 326
Eco53kI GAGCTC 1 cut(s) 666
Eco88I CYCGRG 1 cut(s) 140
Eco91I GGTNACC 2 cut(s) 1884, 1941
EcoICRI GAGCTC 1 cut(s) 666
EcoNI CCTNNNNNAGG 1 cut(s) 128
EcoO109I RGGNCCY 1 cut(s) 326
EcoO65I GGTNACC 2 cut(s) 1884, 1941
EcoRII CCWGG 2 cut(s) 290, 1809
EcoRV GATATC 1 cut(s) 1158
EcoT22I ATGCAT 1 cut(s) 1095
EcoT38I GRGCYC 1 cut(s) 668
FaeI CATG 8 cut(s) 22, 239, 979, 1097, 1369, 1870, 1880, 1922
FalI AAGNNNNNCTT 4 cut(s) 59, 91, 663, 695
FaqI GGGAC 1 cut(s) 1300
FatI CATG 8 cut(s) 18, 235, 975, 1093, 1365, 1866, 1876, 1918
FauI CCCGC 2 cut(s) 310, 431
FblI GTMKAC 1 cut(s) 6
Fnu4HI GCNGC 8 cut(s) 280, 536, 795, 1021, 1349, 1824, 1871, 1874
FokI GGATG 8 cut(s) 83, 109, 439, 512, 844, 1460, 1784, 1846
FriOI GRGCYC 1 cut(s) 668
Fsp4HI GCNGC 8 cut(s) 280, 536, 795, 1021, 1349, 1824, 1871, 1874
FspBI CTAG 3 cut(s) 1595, 1691, 1827
GlaI GCGC 3 cut(s) 1364, 1544, 1546
GluI GCNGC 8 cut(s) 280, 536, 795, 1021, 1349, 1824, 1871, 1874
GsaI CCCAGC 1 cut(s) 1884
GsuI CTGGAG 2 cut(s) 1136, 1793
HaeIII GGCC 4 cut(s) 678, 1181, 1356, 1622
HapII CCGG 3 cut(s) 588, 960, 1182
HgaI GACGC 1 cut(s) 392
HhaI GCGC 3 cut(s) 1365, 1545, 1547
Hin1II CATG 8 cut(s) 22, 239, 979, 1097, 1369, 1870, 1880, 1922
Hin6I GCGC 3 cut(s) 1363, 1543, 1545
HinP1I GCGC 3 cut(s) 1363, 1543, 1545
HincII GTYRAC 2 cut(s) 711, 1915
HindII GTYRAC 2 cut(s) 711, 1915
HindIII AAGCTT 1 cut(s) 1277
HinfI GANTC 4 cut(s) 112, 596, 1046, 1369
HpaI GTTAAC 1 cut(s) 1915
HpaII CCGG 3 cut(s) 588, 960, 1182
HphI GGTGA 7 cut(s) 278, 347, 565, 856, 1041, 1807, 1935
Hpy166II GTNNAC 5 cut(s) 7, 711, 905, 1273, 1915
Hpy188III TCNNGA 7 cut(s) 109, 142, 302, 400, 1595, 1663, 1691
Hpy8I GTNNAC 5 cut(s) 7, 711, 905, 1273, 1915
HpyCH4III ACNGT 4 cut(s) 1053, 1727, 1761, 1795
HpyCH4IV ACGT 2 cut(s) 920, 1269
HpyF10VI GCNNNNNNNGC 4 cut(s) 1316, 1348, 1362, 1728
HpyF3I CTNAG 5 cut(s) 1137, 1320, 1338, 1531, 1968
HpySE526I ACGT 2 cut(s) 920, 1269
Hsp92II CATG 8 cut(s) 22, 239, 979, 1097, 1369, 1870, 1880, 1922
HspAI GCGC 3 cut(s) 1363, 1543, 1545
KspAI GTTAAC 1 cut(s) 1915
Kzo9I GATC 5 cut(s) 232, 442, 1059, 1073, 1229
LmnI GCTCC 2 cut(s) 207, 932
Lsp1109I GCAGC 7 cut(s) 291, 522, 781, 1032, 1360, 1810, 1860
LweI GCATC 2 cut(s) 232, 1797
MaeI CTAG 3 cut(s) 1595, 1691, 1827
MaeII ACGT 2 cut(s) 920, 1269
MaeIII GTNAC 7 cut(s) 266, 734, 844, 916, 1585, 1884, 1941
MalI GATC 5 cut(s) 234, 444, 1061, 1075, 1231
MboI GATC 5 cut(s) 232, 442, 1059, 1073, 1229
MflI RGATCY 2 cut(s) 442, 1059
MhlI GDGCHC 2 cut(s) 212, 668
MluCI AATT 3 cut(s) 392, 464, 484
MlyI GAGTC 2 cut(s) 1040, 1378
MmeI TCCRAC 1 cut(s) 954
Mph1103I ATGCAT 1 cut(s) 1095
MroXI GAANNNNTTC 3 cut(s) 44, 627, 1751
MseI TTAA 7 cut(s) 51, 59, 642, 1142, 1281, 1914, 1935
MslI CAYNNNNRTG 2 cut(s) 978, 1793
MspA1I CMGCKG 2 cut(s) 1023, 1873
MspI CCGG 3 cut(s) 588, 960, 1182
MspR9I CCNGG 2 cut(s) 292, 1811
Mva1269I GAATGC 3 cut(s) 1095, 1386, 1475
MvaI CCWGG 2 cut(s) 292, 1811
MvnI CGCG 1 cut(s) 1545
MwoI GCNNNNNNNGC 4 cut(s) 1316, 1348, 1362, 1728
NdeII GATC 5 cut(s) 232, 442, 1059, 1073, 1229
NlaIII CATG 8 cut(s) 22, 239, 979, 1097, 1369, 1870, 1880, 1922
NlaIV GGNNCC 2 cut(s) 327, 1061
NmuCI GTSAC 3 cut(s) 266, 844, 1941
NsiI ATGCAT 1 cut(s) 1095
NspI RCATGY 3 cut(s) 979, 1870, 1880
OliI CACNNNNGTG 1 cut(s) 978
PaeI GCATGC 2 cut(s) 1870, 1880
PauI GCGCGC 1 cut(s) 1543
PceI AGGCCT 2 cut(s) 678, 1356
PciI ACATGT 1 cut(s) 975
PctI GAATGC 3 cut(s) 1095, 1386, 1475
PdmI GAANNNNTTC 3 cut(s) 44, 627, 1751
PfeI GAWTC 2 cut(s) 112, 596
PflFI GACNNNGTC 1 cut(s) 368
PfoI TCCNGGA 1 cut(s) 1809
PinAI ACCGGT 1 cut(s) 959
PkrI GCNGC 8 cut(s) 281, 537, 796, 1022, 1350, 1825, 1872, 1875
PleI GAGTC 2 cut(s) 1040, 1377
PpsI GAGTC 2 cut(s) 1040, 1377
PpuMI RGGWCCY 1 cut(s) 326
PscI ACATGT 1 cut(s) 975
Psp124BI GAGCTC 1 cut(s) 668
Psp5II RGGWCCY 1 cut(s) 326
Psp6I CCWGG 2 cut(s) 290, 1809
PspEI GGTNACC 2 cut(s) 1884, 1941
PspFI CCCAGC 1 cut(s) 1880
PspGI CCWGG 2 cut(s) 290, 1809
PspN4I GGNNCC 2 cut(s) 327, 1061
PspPI GGNCC 2 cut(s) 326, 1620
PspPPI RGGWCCY 1 cut(s) 326
PstI CTGCAG 2 cut(s) 450, 799
PsuI RGATCY 2 cut(s) 442, 1059
PsyI GACNNNGTC 1 cut(s) 368
PteI GCGCGC 1 cut(s) 1543
RsaI GTAC 9 cut(s) 240, 608, 745, 767, 967, 1168, 1274, 1453, 1580
RsaNI GTAC 9 cut(s) 239, 607, 744, 766, 966, 1167, 1273, 1452, 1579
RseI CAYNNNNRTG 2 cut(s) 978, 1793
SacI GAGCTC 1 cut(s) 668
SaqAI TTAA 7 cut(s) 51, 59, 642, 1142, 1281, 1914, 1935
SatI GCNGC 8 cut(s) 280, 536, 795, 1021, 1349, 1824, 1871, 1874
Sau3AI GATC 5 cut(s) 232, 442, 1059, 1073, 1229
Sau96I GGNCC 2 cut(s) 326, 1620
SchI GAGTC 2 cut(s) 1040, 1378
ScrFI CCNGG 2 cut(s) 292, 1811
SduI GDGCHC 2 cut(s) 212, 668
SfaNI GCATC 2 cut(s) 232, 1797
SfcI CTRYAG 3 cut(s) 415, 446, 795
SinI GGWCC 1 cut(s) 326
SmiMI CAYNNNNRTG 2 cut(s) 978, 1793
SmlI CTYRAG 3 cut(s) 302, 602, 669
SmoI CTYRAG 3 cut(s) 302, 602, 669
SphI GCATGC 2 cut(s) 1870, 1880
Sse9I AATT 3 cut(s) 392, 464, 484
SseBI AGGCCT 2 cut(s) 678, 1356
SsiI CCGC 5 cut(s) 88, 317, 438, 1023, 1871
SspMI CTAG 3 cut(s) 1595, 1691, 1827
SstI GAGCTC 1 cut(s) 668
StuI AGGCCT 2 cut(s) 678, 1356
StyD4I CCNGG 2 cut(s) 290, 1809
TaaI ACNGT 4 cut(s) 1053, 1727, 1761, 1795
TaiI ACGT 2 cut(s) 923, 1272
TaqI TCGA 1 cut(s) 24
TaqII GACCGA 2 cut(s) 674, 1929
TasI AATT 3 cut(s) 392, 464, 484
TatI WGTACW 4 cut(s) 238, 765, 965, 1272
TauI GCSGC 1 cut(s) 1873
TfiI GAWTC 2 cut(s) 112, 596
Tru1I TTAA 7 cut(s) 51, 59, 642, 1142, 1281, 1914, 1935
Tru9I TTAA 7 cut(s) 51, 59, 642, 1142, 1281, 1914, 1935
TscAI CASTG 1 cut(s) 1738
TseFI GTSAC 3 cut(s) 266, 844, 1941
TseI GCWGC 7 cut(s) 279, 535, 794, 1020, 1348, 1823, 1873
Tsp45I GTSAC 3 cut(s) 266, 844, 1941
TspGWI ACGGA 1 cut(s) 1113
TspRI CASTG 1 cut(s) 1738
Tth111I GACNNNGTC 1 cut(s) 368
VpaK11BI GGWCC 1 cut(s) 326
XagI CCTNNNNNAGG 1 cut(s) 128
XapI RAATTY 2 cut(s) 392, 464
XbaI TCTAGA 2 cut(s) 1594, 1690
XceI RCATGY 3 cut(s) 979, 1870, 1880
XcmI CCANNNNNNNNNTGG 1 cut(s) 1896
XmiI GTMKAC 1 cut(s) 6
XmnI GAANNNNTTC 3 cut(s) 44, 627, 1751
XspI CTAG 3 cut(s) 1595, 1691, 1827
Zsp2I ATGCAT 1 cut(s) 1095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.