pycom14g16810
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
18987652 .. 18988190
539 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g16810.2

Sequence Viewer

Length: 351 bp
ATGACGAAGACTAGTGATTCCACCAGTAGTGATGATGTTGAAGAAAAGTCTGGCACTAGTGGAACCAAGATGACGTTTCAGAGAAAGCAACAGAAGTATGTTGTGATGAACATAACTTCTGGGAAAGAATTGTGGGCTGCATTAGAGACAAAATATATGAAGAAAAGTGCAGAGAATCGACTACATCTCAACAGCAAGTTGTATAGGTTCCAGTACAAAGAGGGCACGAAGATGATTGGCCATCTAAAAGAGTTTAACAAGCTTTTAGCTGAACTGGCAAATATTGAAAAGATAATCATAGATGAAGACAAGGTCTTGATCCTAATGAACTCATTGCCTGAATCCTATTAG
Functional Annotation

Protein Analysis

117

Amino Acids

13.39

Weight (kDa)

9.02

Isoelectric Point (pI)

42.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 313
AcoI YGGCCR 1 cut(s) 238
AfaI GTAC 1 cut(s) 215
AgsI TTSAA 2 cut(s) 41, 287
AhlI ACTAGT 2 cut(s) 11, 56
AluBI AGCT 2 cut(s) 262, 269
AluI AGCT 2 cut(s) 262, 269
Alw26I GTCTC 1 cut(s) 140
AlwI GGATC 1 cut(s) 313
AoxI GGCC 1 cut(s) 238
ApeKI GCWGC 1 cut(s) 137
BaeGI GKGCMC 1 cut(s) 227
BalI TGGCCA 1 cut(s) 240
BbsI GAAGAC 2 cut(s) 14, 312
BbvI GCAGC 1 cut(s) 124
BccI CCATC 1 cut(s) 249
BcoDI GTCTC 1 cut(s) 140
BcuI ACTAGT 2 cut(s) 11, 56
BfaI CTAG 2 cut(s) 12, 57
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
BmiI GGNNCC 2 cut(s) 64, 209
BpiI GAAGAC 2 cut(s) 14, 312
Bse1I ACTGG 3 cut(s) 24, 211, 279
Bse3DI GCAATG 1 cut(s) 332
BseMI GCAATG 1 cut(s) 332
BseNI ACTGG 3 cut(s) 24, 211, 279
BseSI GKGCMC 1 cut(s) 227
BseXI GCAGC 1 cut(s) 124
BsgI GTGCAG 1 cut(s) 189
BshFI GGCC 1 cut(s) 240
BsmAI GTCTC 1 cut(s) 140
BsnI GGCC 1 cut(s) 240
Bsp1286I GDGCHC 1 cut(s) 227
Bsp143I GATC 1 cut(s) 318
BspANI GGCC 1 cut(s) 240
BspLI GGNNCC 2 cut(s) 64, 209
BspPI GGATC 1 cut(s) 313
BsrDI GCAATG 1 cut(s) 332
BsrI ACTGG 3 cut(s) 24, 211, 279
BssMI GATC 1 cut(s) 318
BstKTI GATC 1 cut(s) 321
BstMAI GTCTC 1 cut(s) 140
BstMBI GATC 1 cut(s) 318
BstMWI GCNNNNNNNGC 1 cut(s) 275
BstSLI GKGCMC 1 cut(s) 227
BstV1I GCAGC 1 cut(s) 124
BstV2I GAAGAC 2 cut(s) 14, 312
BsuRI GGCC 1 cut(s) 240
Csp6I GTAC 1 cut(s) 214
CviJI RGCY 4 cut(s) 137, 240, 262, 269
CviKI_1 RGCY 4 cut(s) 137, 240, 262, 269
CviQI GTAC 1 cut(s) 214
DpnI GATC 1 cut(s) 320
DpnII GATC 1 cut(s) 318
EaeI YGGCCR 1 cut(s) 238
FaiI YATR 6 cut(s) 99, 113, 156, 158, 204, 299
Fnu4HI GCNGC 1 cut(s) 138
Fsp4HI GCNGC 1 cut(s) 138
FspBI CTAG 2 cut(s) 12, 57
GluI GCNGC 1 cut(s) 138
HaeIII GGCC 1 cut(s) 240
HindIII AAGCTT 1 cut(s) 260
HinfI GANTC 3 cut(s) 17, 175, 341
Hpy188I TCNGA 1 cut(s) 81
Hpy188III TCNNGA 1 cut(s) 316
HpyCH4IV ACGT 1 cut(s) 74
HpyCH4V TGCA 2 cut(s) 140, 170
HpyF10VI GCNNNNNNNGC 1 cut(s) 275
HpySE526I ACGT 1 cut(s) 74
Kzo9I GATC 1 cut(s) 318
LpnPI CCDG 5 cut(s) 36, 37, 105, 224, 260
Lsp1109I GCAGC 1 cut(s) 124
MaeI CTAG 2 cut(s) 12, 57
MaeII ACGT 1 cut(s) 74
MalI GATC 1 cut(s) 320
MboI GATC 1 cut(s) 318
MboII GAAGA 5 cut(s) 19, 53, 172, 241, 317
MhlI GDGCHC 1 cut(s) 227
MlsI TGGCCA 1 cut(s) 240
MluCI AATT 1 cut(s) 128
MluNI TGGCCA 1 cut(s) 240
MnlI CCTC 1 cut(s) 214
Mox20I TGGCCA 1 cut(s) 240
MscI TGGCCA 1 cut(s) 240
MseI TTAA 1 cut(s) 255
MslI CAYNNNNRTG 1 cut(s) 230
Msp20I TGGCCA 1 cut(s) 240
MwoI GCNNNNNNNGC 1 cut(s) 275
NdeII GATC 1 cut(s) 318
NlaIV GGNNCC 2 cut(s) 64, 209
PfeI GAWTC 3 cut(s) 17, 175, 341
PflFI GACNNNGTC 1 cut(s) 311
PkrI GCNGC 1 cut(s) 139
PspN4I GGNNCC 2 cut(s) 64, 209
PsyI GACNNNGTC 1 cut(s) 311
RsaI GTAC 1 cut(s) 215
RsaNI GTAC 1 cut(s) 214
RseI CAYNNNNRTG 1 cut(s) 230
SaqAI TTAA 1 cut(s) 255
SatI GCNGC 1 cut(s) 138
Sau3AI GATC 1 cut(s) 318
SduI GDGCHC 1 cut(s) 227
SetI ASST 5 cut(s) 77, 209, 264, 271, 315
SmiMI CAYNNNNRTG 1 cut(s) 230
SpeI ACTAGT 2 cut(s) 11, 56
Sse9I AATT 1 cut(s) 128
SspI AATATT 1 cut(s) 283
SspMI CTAG 2 cut(s) 12, 57
TaiI ACGT 1 cut(s) 77
TaqI TCGA 1 cut(s) 178
TasI AATT 1 cut(s) 128
TatI WGTACW 1 cut(s) 213
TfiI GAWTC 3 cut(s) 17, 175, 341
Tru1I TTAA 1 cut(s) 255
Tru9I TTAA 1 cut(s) 255
TseI GCWGC 1 cut(s) 137
TspDTI ATGAA 4 cut(s) 122, 173, 318, 341
Tth111I GACNNNGTC 1 cut(s) 311
XspI CTAG 2 cut(s) 12, 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.