FvH4_3g22421

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000278
Physical Location & Seq
Forward (+)
15478341 .. 15482700
4360 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g22421.t1

Sequence Viewer

Length: 2058 bp
ATGGTGAAAAGCAAAGGGATGGTCGAAGCAGGAGATGTGAAAGTGTCCATCAAACCCTTTGATGGCAAGGATGATTTCACGCTTTGGCAGAGGAAGATGAAGAACGTCCTGATTCAGCAAGAGACCGACGAGGCTATTGGAACAAAGCCTACAAGCATGTCTGACGCAGAATGGACGAAGAAGAACAAGAAAGCAAAGAGCTGTATTGAGTTGCATCTTGCTGATAATGTCTTACTTCACATTGGAGAGACAATGACTGCAAAGGAAGCATGGGAAAAGCTTGAAAGCGTCTACAGGGGTAAAAGCATCGGCAACAAGCTACTCTTGAAGGAACAGCTCTTTGGCCTCAGGATGGAGGAAGGGGATGATCTTAATGATCATATATGCAAGTTCCAGAACTGCATAGCAAACTTGGAGAAGGTCGGAGCGAAGATGGATGACGAAGACACGGCTGTTATGCTACTGCATTCGCTGCCACCTTCATTCAAGCACTTCAAAACCACCATGATATTCAAGGAGTCGATCACACTCTCTAAAGTGTGTGAGAACCTGGAATCTTACATCAGATTGGAGAGAGAAGAAGATAGTTCTCAAGCACGGGGACTCTATGTCAGAGGCAAGGAGAGAGGAAGGTCAAGGAATAGAGGTGGTGGATTTCAAGGAATGGGCAGGTCTAAATCCAAGGGAAAAGGCAAAGAAAAGAAAGATGGTTGCTTCATATGTGGTTCACCCGACCACTGGAAAAGGAATTGCAAACAATGGAAGGAGAAGAAGGCGCAGATGTCAGGAGAAAGCTCCCAGTCAGCCAACGTCGTCATTGGATACAATGATGAGGATGGAGAACTCCTCGCAATCTCAACCAGCTCCGGCGCGCCTAGACATTGGACCTTGGATACGGCCTGCACGTTTCATATGTGTGCACACAGAGATTGGTTCAACACATATAAGGAAAGGAACACCGGATCAGTTTTGATGGGAAATGATTCACCAAGCAGAATTATGGGAATCGGAACAGTAAGGATCAGAATGCATGATGGCATTGTCAGAACGCTGGGAAACGTTAGACATATCCCAGGTTTGAGCAGAAATCTGATTTCATTAAGTACCATGGATAGGGCTGGTTTTTGGCATAAAGGTCAGAATGGAGTGCTCAAAGTAGGAAAGGGACAAATGGTCTACATGAAGGGTGCAATACAACCAGATAACATGTATAAACTCACAGGTTCTACAGTAGAAGGTGGAGCAGCAGTTTGTACGGAAGAAGACAAGACTGAGCTTTGGCATAGAAGGCTAGGGCACATGAGTCAAAGAGGGTTGCAAGAATTACACAAGAAGGAACATTTAGATGGTGTAATGAGTGCAGCTTTAGAATTTTGCAAGTATTGCACACTTGGGAAGCAGACCAGAGTGTCATTCAATTTGAGTAGCAGCGAGAACAAATCCAAAGGAGTACTGGACTATATTCACACAGATGTCTGGGGGCCATCAGCAACAATATCAAAGGGTGGAGCCAGATACTTCGTGTCCTTCATAGATGATTTCTCAAGGAAGACCATGCCATTAAATGCAGAAGCTAATAGCAAGAAGGGGCAGATGGCTGTTGATGAAGGAGAAGCAATCAGTATTTCATTAGCTAAACCATCAGTTGCAGATTCAGAAGCTCAGGTGGAGCAAATTGAGCAAGGGAATGATGAAGTAGCTATTGAGGAACCAGAGCATCAACAACAGCCAACCGTTATGGCTCAAGTGGAGCAATCTCCACAAAGAGGACAGAATTCTCCTATCCCACAAGCACCTGAGTCATTCAAAAGAAGCATAGCACTTGACAAACCCAAAAGGAGTCGAAAACCAATTCAGCGTTTTGGATTCGAACCGGAAGAAGATGTGAATCGTGCTCTGAGTATAAGTCAAGGAGATCCAACAACATACGAAGACGCCATAGAAAGCGTGGAAAGTGCAGGCAAGAAGAGTCTTGCCAAGGTGAAGGTTCTTGGAGGTTTTGTTCAGGGTTACTTCAAGAAGATTCAAGATATCCTGAAGGGAGATTTTGTCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC PAH

Protein Analysis

686

Amino Acids

76.4

Weight (kDa)

8.7

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 38 - 184 5.1e-34 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 295 - 375 1.1e-26 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 402 - 467 2e-17 GAG-pre-integrase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1408
Acc36I ACCTGC 1 cut(s) 660
AccI GTMKAC 2 cut(s) 291, 1176
AccII CGCG 1 cut(s) 872
AclI AACGTT 1 cut(s) 1059
AclWI GGATC 3 cut(s) 970, 1028, 1910
AcsI RAATTY 2 cut(s) 1370, 1774
AcuI CTGAAG 1 cut(s) 2057
AcyI GRCGYC 1 cut(s) 1935
AfaI GTAC 3 cut(s) 1105, 1255, 1452
AfiI CCNNNNNNNGG 5 cut(s) 62, 352, 738, 1113, 1766
AflIII ACRYGT 1 cut(s) 1206
AhdI GACNNNNNGTC 2 cut(s) 608, 1172
AjnI CCWGG 2 cut(s) 549, 1072
AjuI GAANNNNNNNTTGG 2 cut(s) 324, 356
AloI GAACNNNNNNTCC 2 cut(s) 1986, 2018
Alw21I GWGCWC 3 cut(s) 922, 1152, 1897
Alw26I GTCTC 2 cut(s) 116, 242
Alw44I GTGCAC 1 cut(s) 918
AlwI GGATC 3 cut(s) 970, 1028, 1910
AoxI GGCC 3 cut(s) 343, 897, 1481
ApaLI GTGCAC 1 cut(s) 918
ApeKI GCWGC 4 cut(s) 472, 1244, 1361, 1428
ApoI RAATTY 2 cut(s) 1370, 1774
ArsI GACNNNNNNTTYG 1 cut(s) 38
AscI GGCGCGCC 1 cut(s) 870
Asp700I GAANNNNTTC 1 cut(s) 982
AspLEI GCGC 3 cut(s) 778, 872, 874
AspS9I GGNCC 2 cut(s) 885, 1481
AsuHPI GGTGA 4 cut(s) 16, 720, 978, 1993
AsuII TTCGAA 1 cut(s) 1869
AvaII GGWCC 1 cut(s) 885
AxyI CCTNAGG 1 cut(s) 347
BaeGI GKGCMC 2 cut(s) 922, 1299
BbsI GAAGAC 4 cut(s) 450, 1269, 1556, 1938
Bbv12I GWGCWC 3 cut(s) 922, 1152, 1897
BbvI GCAGC 4 cut(s) 459, 1256, 1373, 1440
BceAI ACGGC 2 cut(s) 465, 912
BciT130I CCWGG 2 cut(s) 551, 1074
BciVI GTATCC 2 cut(s) 815, 886
BclI TGATCA 1 cut(s) 376
BcoDI GTCTC 2 cut(s) 116, 242
BfaI CTAG 3 cut(s) 876, 1292, 2056
BfmI CTRYAG 2 cut(s) 292, 1227
BfuAI ACCTGC 1 cut(s) 660
BfuI GTATCC 2 cut(s) 815, 886
BisI GCNGC 4 cut(s) 473, 1245, 1362, 1429
BlsI GCNGC 4 cut(s) 474, 1246, 1363, 1430
BmcAI AGTACT 1 cut(s) 1452
Bme1390I CCNGG 2 cut(s) 551, 1074
Bme18I GGWCC 1 cut(s) 885
BmeRI GACNNNNNGTC 2 cut(s) 608, 1172
BmgT120I GGNCC 2 cut(s) 885, 1481
BmiI GGNNCC 3 cut(s) 1482, 1510, 1710
BmrFI CCNGG 2 cut(s) 551, 1074
BmrI ACTGGG 1 cut(s) 793
BmsI GCATC 3 cut(s) 223, 315, 1726
BmuI ACTGGG 1 cut(s) 793
BpiI GAAGAC 4 cut(s) 450, 1269, 1556, 1938
BplI GAGNNNNNCTC 2 cut(s) 831, 863
Bpu10I CCTNAGC 1 cut(s) 1662
Bpu14I TTCGAA 1 cut(s) 1869
BpuEI CTTGAG 3 cut(s) 576, 1528, 1728
BsaBI GATNNNNATC 1 cut(s) 1887
BsaHI GRCGYC 1 cut(s) 1935
BsaI GGTCTC 1 cut(s) 116
BsaJI CCNNGG 5 cut(s) 681, 888, 1072, 1107, 1977
BsaWI WCCGGW 2 cut(s) 959, 1873
BsaXI ACNNNNNCTCC 5 cut(s) 1233, 1263, 1986, 2016, 2034
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 352, 738, 1113, 1766
Bse1I ACTGG 3 cut(s) 743, 799, 1458
Bse21I CCTNAGG 1 cut(s) 347
Bse8I GATNNNNATC 1 cut(s) 1887
BseBI CCWGG 2 cut(s) 551, 1074
BseDI CCNNGG 5 cut(s) 681, 888, 1072, 1107, 1977
BseGI GGATG 6 cut(s) 24, 76, 357, 370, 442, 841
BseJI GATNNNNATC 1 cut(s) 1887
BseLI CCNNNNNNNGG 5 cut(s) 62, 352, 738, 1113, 1766
BseMII CTCAG 5 cut(s) 361, 1263, 1676, 1788, 1889
BseNI ACTGG 3 cut(s) 743, 799, 1458
BsePI GCGCGC 1 cut(s) 870
BseRI GAGGAG 1 cut(s) 836
BseSI GKGCMC 2 cut(s) 922, 1299
BseXI GCAGC 4 cut(s) 459, 1256, 1373, 1440
BseYI CCCAGC 1 cut(s) 1051
BsgI GTGCAG 3 cut(s) 886, 1380, 1977
Bsh1236I CGCG 1 cut(s) 872
BshFI GGCC 3 cut(s) 345, 899, 1483
BsiHKAI GWGCWC 3 cut(s) 922, 1152, 1897
BsiSI CCGG 3 cut(s) 867, 960, 1874
BslFI GGGAC 2 cut(s) 615, 1179
BslI CCNNNNNNNGG 5 cut(s) 62, 352, 738, 1113, 1766
BsmAI GTCTC 2 cut(s) 116, 242
BsmFI GGGAC 2 cut(s) 615, 1179
BsmI GAATGC 2 cut(s) 466, 1032
BsnI GGCC 3 cut(s) 345, 899, 1483
Bso31I GGTCTC 1 cut(s) 116
Bsp119I TTCGAA 1 cut(s) 1869
Bsp1286I GDGCHC 4 cut(s) 922, 1152, 1299, 1897
Bsp143I GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
Bsp19I CCATGG 1 cut(s) 1107
BspANI GGCC 3 cut(s) 345, 899, 1483
BspCNI CTCAG 5 cut(s) 360, 1264, 1675, 1789, 1890
BspFNI CGCG 1 cut(s) 872
BspLI GGNNCC 3 cut(s) 1482, 1510, 1710
BspMI ACCTGC 1 cut(s) 660
BspPI GGATC 3 cut(s) 970, 1028, 1910
BspT104I TTCGAA 1 cut(s) 1869
BspTNI GGTCTC 1 cut(s) 116
BsrI ACTGG 3 cut(s) 743, 799, 1458
BssECI CCNNGG 5 cut(s) 681, 888, 1072, 1107, 1977
BssHII GCGCGC 1 cut(s) 870
BssMI GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
BssNI GRCGYC 1 cut(s) 1935
BssT1I CCWWGG 4 cut(s) 681, 888, 1107, 1977
Bst2UI CCWGG 2 cut(s) 551, 1074
Bst4CI ACNGT 3 cut(s) 1015, 1231, 1735
Bst6I CTCTTC 1 cut(s) 1961
BstACI GRCGYC 1 cut(s) 1935
BstAPI GCANNNNNTGC 2 cut(s) 472, 1383
BstBI TTCGAA 1 cut(s) 1869
BstC8I GCNNGC 3 cut(s) 872, 901, 1960
BstDEI CTNAG 5 cut(s) 347, 1272, 1662, 1797, 1898
BstDSI CCRYGG 1 cut(s) 1107
BstF5I GGATG 6 cut(s) 24, 76, 357, 370, 442, 841
BstFNI CGCG 1 cut(s) 872
BstHHI GCGC 3 cut(s) 778, 872, 874
BstKTI GATC 6 cut(s) 370, 379, 525, 965, 1023, 1918
BstMAI GTCTC 2 cut(s) 116, 242
BstMBI GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
BstMWI GCNNNNNNNGC 5 cut(s) 266, 472, 1288, 1383, 1678
BstNI CCWGG 2 cut(s) 551, 1074
BstNSI RCATGY 2 cut(s) 160, 1210
BstSCI CCNGG 2 cut(s) 549, 1072
BstSFI CTRYAG 2 cut(s) 292, 1227
BstSLI GKGCMC 2 cut(s) 922, 1299
BstUI CGCG 1 cut(s) 872
BstV1I GCAGC 4 cut(s) 459, 1256, 1373, 1440
BstV2I GAAGAC 4 cut(s) 450, 1269, 1556, 1938
BstX2I RGATCY 1 cut(s) 1915
BstYI RGATCY 1 cut(s) 1915
Bsu36I CCTNAGG 1 cut(s) 347
BsuI GTATCC 2 cut(s) 815, 886
BsuRI GGCC 3 cut(s) 345, 899, 1483
BtgI CCRYGG 1 cut(s) 1107
BtsCI GGATG 6 cut(s) 24, 76, 357, 370, 442, 841
BtsIMutI CAGTG 1 cut(s) 736
BveI ACCTGC 1 cut(s) 660
Cac8I GCNNGC 3 cut(s) 872, 901, 1960
CfoI GCGC 3 cut(s) 778, 872, 874
Cfr13I GGNCC 2 cut(s) 885, 1481
CseI GACGC 3 cut(s) 173, 277, 1943
Csp6I GTAC 3 cut(s) 1104, 1254, 1451
CviAII CATG 9 cut(s) 157, 270, 505, 1031, 1108, 1180, 1207, 1300, 1555
CviQI GTAC 3 cut(s) 1104, 1254, 1451
DdeI CTNAG 5 cut(s) 347, 1272, 1662, 1797, 1898
DpnI GATC 6 cut(s) 369, 378, 524, 964, 1022, 1917
DpnII GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
DrdI GACNNNNNNGTC 1 cut(s) 1408
DriI GACNNNNNGTC 2 cut(s) 608, 1172
DseDI GACNNNNNNGTC 1 cut(s) 1408
Eam1104I CTCTTC 1 cut(s) 1961
Eam1105I GACNNNNNGTC 2 cut(s) 608, 1172
EarI CTCTTC 1 cut(s) 1961
Eco130I CCWWGG 4 cut(s) 681, 888, 1107, 1977
Eco31I GGTCTC 1 cut(s) 116
Eco32I GATATC 1 cut(s) 2032
Eco47I GGWCC 1 cut(s) 885
Eco57I CTGAAG 1 cut(s) 2057
Eco81I CCTNAGG 1 cut(s) 347
EcoRI GAATTC 1 cut(s) 1774
EcoRII CCWGG 2 cut(s) 549, 1072
EcoRV GATATC 1 cut(s) 2032
EcoT14I CCWWGG 4 cut(s) 681, 888, 1107, 1977
EcoT22I ATGCAT 1 cut(s) 1032
ErhI CCWWGG 4 cut(s) 681, 888, 1107, 1977
FaeI CATG 9 cut(s) 160, 273, 508, 1034, 1111, 1183, 1210, 1303, 1558
FalI AAGNNNNNCTT 2 cut(s) 308, 340
FaqI GGGAC 2 cut(s) 615, 1179
FatI CATG 9 cut(s) 156, 269, 504, 1030, 1107, 1179, 1206, 1299, 1554
FauNDI CATATG 2 cut(s) 719, 912
FbaI TGATCA 1 cut(s) 376
FblI GTMKAC 2 cut(s) 291, 1176
Fnu4HI GCNGC 4 cut(s) 473, 1245, 1362, 1429
FokI GGATG 6 cut(s) 31, 83, 364, 377, 449, 848
Fsp4HI GCNGC 4 cut(s) 473, 1245, 1362, 1429
FspBI CTAG 3 cut(s) 876, 1292, 2056
GlaI GCGC 3 cut(s) 777, 871, 873
GluI GCNGC 4 cut(s) 473, 1245, 1362, 1429
GsaI CCCAGC 1 cut(s) 1055
HaeIII GGCC 3 cut(s) 345, 899, 1483
HapII CCGG 3 cut(s) 867, 960, 1874
HgaI GACGC 3 cut(s) 173, 277, 1943
HhaI GCGC 3 cut(s) 778, 872, 874
Hin1I GRCGYC 1 cut(s) 1935
Hin1II CATG 9 cut(s) 160, 273, 508, 1034, 1111, 1183, 1210, 1303, 1558
Hin6I GCGC 3 cut(s) 776, 870, 872
HinP1I GCGC 3 cut(s) 776, 870, 872
HindIII AAGCTT 1 cut(s) 278
HpaII CCGG 3 cut(s) 867, 960, 1874
HphI GGTGA 4 cut(s) 16, 720, 978, 1993
Hpy166II GTNNAC 4 cut(s) 292, 728, 920, 1177
Hpy188III TCNNGA 8 cut(s) 109, 325, 349, 394, 786, 2017, 2027, 2035
Hpy8I GTNNAC 4 cut(s) 292, 728, 920, 1177
Hpy99I CGWCG 2 cut(s) 131, 815
HpyCH4III ACNGT 3 cut(s) 1015, 1231, 1735
HpyCH4IV ACGT 4 cut(s) 105, 810, 905, 1059
HpyF10VI GCNNNNNNNGC 5 cut(s) 266, 472, 1288, 1383, 1678
HpyF3I CTNAG 5 cut(s) 347, 1272, 1662, 1797, 1898
HpySE526I ACGT 4 cut(s) 105, 810, 905, 1059
Hsp92I GRCGYC 1 cut(s) 1935
Hsp92II CATG 9 cut(s) 160, 273, 508, 1034, 1111, 1183, 1210, 1303, 1558
HspAI GCGC 3 cut(s) 776, 870, 872
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
LmnI GCTCC 7 cut(s) 425, 800, 869, 1241, 1508, 1669, 1750
Lsp1109I GCAGC 4 cut(s) 459, 1256, 1373, 1440
LweI GCATC 3 cut(s) 223, 315, 1726
MaeI CTAG 3 cut(s) 876, 1292, 2056
MaeII ACGT 4 cut(s) 105, 810, 905, 1059
MaeIII GTNAC 1 cut(s) 2009
MalI GATC 6 cut(s) 369, 378, 524, 964, 1022, 1917
MboI GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
MflI RGATCY 1 cut(s) 1915
MhlI GDGCHC 4 cut(s) 922, 1152, 1299, 1897
MluCI AATT 8 cut(s) 748, 996, 1322, 1370, 1417, 1674, 1774, 1851
MlyI GAGTC 6 cut(s) 527, 597, 1312, 1808, 1849, 1978
MmeI TCCRAC 2 cut(s) 403, 1943
Mph1103I ATGCAT 1 cut(s) 1032
MroXI GAANNNNTTC 1 cut(s) 982
MseI TTAA 3 cut(s) 372, 1100, 1562
MslI CAYNNNNRTG 3 cut(s) 915, 1344, 1470
MspI CCGG 3 cut(s) 867, 960, 1874
MspR9I CCNGG 2 cut(s) 551, 1074
Mva1269I GAATGC 2 cut(s) 466, 1032
MvaI CCWGG 2 cut(s) 551, 1074
MvnI CGCG 1 cut(s) 872
MwoI GCNNNNNNNGC 5 cut(s) 266, 472, 1288, 1383, 1678
NcoI CCATGG 1 cut(s) 1107
NdeI CATATG 2 cut(s) 719, 912
NdeII GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
NlaIII CATG 9 cut(s) 160, 273, 508, 1034, 1111, 1183, 1210, 1303, 1558
NlaIV GGNNCC 3 cut(s) 1482, 1510, 1710
NsiI ATGCAT 1 cut(s) 1032
NspI RCATGY 2 cut(s) 160, 1210
NspV TTCGAA 1 cut(s) 1869
PalAI GGCGCGCC 1 cut(s) 870
PauI GCGCGC 1 cut(s) 870
PciI ACATGT 1 cut(s) 1206
PcsI WCGNNNNNNNCGW 1 cut(s) 902
PctI GAATGC 2 cut(s) 466, 1032
PdmI GAANNNNTTC 1 cut(s) 982
PfeI GAWTC 8 cut(s) 112, 554, 983, 1005, 1652, 1866, 1888, 2023
PkrI GCNGC 4 cut(s) 474, 1246, 1363, 1430
PleI GAGTC 6 cut(s) 526, 597, 1311, 1807, 1848, 1977
PpsI GAGTC 6 cut(s) 526, 597, 1311, 1807, 1848, 1977
PscI ACATGT 1 cut(s) 1206
Psp1406I AACGTT 1 cut(s) 1059
Psp6I CCWGG 2 cut(s) 549, 1072
PspFI CCCAGC 1 cut(s) 1051
PspGI CCWGG 2 cut(s) 549, 1072
PspN4I GGNNCC 3 cut(s) 1482, 1510, 1710
PspPI GGNCC 2 cut(s) 885, 1481
PsrI GAACNNNNNNTAC 2 cut(s) 133, 165
PsuI RGATCY 1 cut(s) 1915
PteI GCGCGC 1 cut(s) 870
RsaI GTAC 3 cut(s) 1105, 1255, 1452
RsaNI GTAC 3 cut(s) 1104, 1254, 1451
RseI CAYNNNNRTG 3 cut(s) 915, 1344, 1470
SaqAI TTAA 3 cut(s) 372, 1100, 1562
SatI GCNGC 4 cut(s) 473, 1245, 1362, 1429
Sau3AI GATC 6 cut(s) 367, 376, 522, 962, 1020, 1915
Sau96I GGNCC 2 cut(s) 885, 1481
ScaI AGTACT 1 cut(s) 1452
SchI GAGTC 6 cut(s) 527, 597, 1312, 1808, 1849, 1978
ScrFI CCNGG 2 cut(s) 551, 1074
SduI GDGCHC 4 cut(s) 922, 1152, 1299, 1897
SfaNI GCATC 3 cut(s) 223, 315, 1726
SfcI CTRYAG 2 cut(s) 292, 1227
SfuI TTCGAA 1 cut(s) 1869
SgsI GGCGCGCC 1 cut(s) 870
SinI GGWCC 1 cut(s) 885
SmiMI CAYNNNNRTG 3 cut(s) 915, 1344, 1470
SmlI CTYRAG 3 cut(s) 591, 1543, 1743
SmoI CTYRAG 3 cut(s) 591, 1543, 1743
Sse9I AATT 8 cut(s) 748, 996, 1322, 1370, 1417, 1674, 1774, 1851
SspMI CTAG 3 cut(s) 876, 1292, 2056
StyD4I CCNGG 2 cut(s) 549, 1072
StyI CCWWGG 4 cut(s) 681, 888, 1107, 1977
TaaI ACNGT 3 cut(s) 1015, 1231, 1735
TaiI ACGT 4 cut(s) 108, 813, 908, 1062
TaqI TCGA 4 cut(s) 24, 521, 1843, 1869
TaqII GACCGA 1 cut(s) 140
TasI AATT 8 cut(s) 748, 996, 1322, 1370, 1417, 1674, 1774, 1851
TatI WGTACW 1 cut(s) 1450
TfiI GAWTC 8 cut(s) 112, 554, 983, 1005, 1652, 1866, 1888, 2023
Tru1I TTAA 3 cut(s) 372, 1100, 1562
Tru9I TTAA 3 cut(s) 372, 1100, 1562
TscAI CASTG 1 cut(s) 743
TseI GCWGC 4 cut(s) 472, 1244, 1361, 1428
TspGWI ACGGA 1 cut(s) 1271
TspRI CASTG 1 cut(s) 743
VneI GTGCAC 1 cut(s) 918
VpaK11BI GGWCC 1 cut(s) 885
XapI RAATTY 2 cut(s) 1370, 1774
XceI RCATGY 2 cut(s) 160, 1210
XcmI CCANNNNNNNNNTGG 2 cut(s) 1450, 1945
XmiI GTMKAC 2 cut(s) 291, 1176
XmnI GAANNNNTTC 1 cut(s) 982
XspI CTAG 3 cut(s) 876, 1292, 2056
ZrmI AGTACT 1 cut(s) 1452
Zsp2I ATGCAT 1 cut(s) 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.