disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| gag_pre-integrs | PF13976 | 18 - 86 | 1.6e-18 | GAG-pre-integrase domain |
| rve | PF00665 | 107 - 200 | 2.6e-14 | Integrase core domain |
| SH3_retrovirus | PF25597 | 275 - 333 | 1.3e-18 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 456 - 703 | 5.2e-77 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1165 |
| Acc16I | TGCGCA | 1 cut(s) | 1587 |
| Acc36I | ACCTGC | 1 cut(s) | 1165 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 135 |
| AccI | GTMKAC | 4 cut(s) | 831, 998, 1198, 1430 |
| AciI | CCGC | 2 cut(s) | 2538, 2543 |
| AclWI | GGATC | 2 cut(s) | 854, 1968 |
| AcoI | YGGCCR | 1 cut(s) | 2535 |
| AcsI | RAATTY | 4 cut(s) | 1285, 2066, 2377, 2706 |
| AcuI | CTGAAG | 3 cut(s) | 723, 1167, 2541 |
| AdeI | CACNNNGTG | 1 cut(s) | 44 |
| AfaI | GTAC | 5 cut(s) | 88, 277, 2101, 2638, 2755 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 135, 327, 2287 |
| AflIII | ACRYGT | 1 cut(s) | 1039 |
| AhlI | ACTAGT | 1 cut(s) | 1381 |
| AjnI | CCWGG | 2 cut(s) | 1222, 2281 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1210, 1242 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2721, 2753 |
| Alw26I | GTCTC | 3 cut(s) | 934, 1060, 1671 |
| AlwI | GGATC | 2 cut(s) | 854, 1968 |
| Ama87I | CYCGRG | 1 cut(s) | 1176 |
| AoxI | GGCC | 2 cut(s) | 332, 2535 |
| ApeKI | GCWGC | 9 cut(s) | 92, 1124, 1416, 1609, 1840, 2303, 2540, 2795, 2798 |
| ApoI | RAATTY | 4 cut(s) | 1285, 2066, 2377, 2706 |
| AseI | ATTAAT | 1 cut(s) | 2688 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1383, 1446, 2368 |
| AspLEI | GCGC | 1 cut(s) | 1588 |
| AspS9I | GGNCC | 2 cut(s) | 332, 777 |
| AsuC2I | CCSGG | 1 cut(s) | 673 |
| AsuHPI | GGTGA | 7 cut(s) | 173, 1019, 1352, 1652, 1979, 2272, 2426 |
| AsuII | TTCGAA | 1 cut(s) | 1950 |
| AvaI | CYCGRG | 1 cut(s) | 1176 |
| AvaII | GGWCC | 1 cut(s) | 777 |
| BanII | GRGCYC | 1 cut(s) | 20 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| BbvI | GCAGC | 9 cut(s) | 79, 1136, 1403, 1621, 1827, 2290, 2527, 2782, 2785 |
| BccI | CCATC | 7 cut(s) | 670, 746, 998, 1288, 1670, 1841, 2420 |
| BceAI | ACGGC | 2 cut(s) | 1175, 2234 |
| BciT130I | CCWGG | 2 cut(s) | 1224, 2283 |
| BclI | TGATCA | 1 cut(s) | 1816 |
| BcnI | CCSGG | 1 cut(s) | 673 |
| BcoDI | GTCTC | 3 cut(s) | 934, 1060, 1671 |
| BcuI | ACTAGT | 1 cut(s) | 1381 |
| BfmI | CTRYAG | 3 cut(s) | 93, 913, 1185 |
| BfuAI | ACCTGC | 1 cut(s) | 1165 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1228 |
| BglII | AGATCT | 1 cut(s) | 2090 |
| BmcAI | AGTACT | 1 cut(s) | 2755 |
| Bme1390I | CCNGG | 3 cut(s) | 673, 1224, 2283 |
| Bme18I | GGWCC | 1 cut(s) | 777 |
| BmeT110I | CYCGRG | 1 cut(s) | 1176 |
| BmgT120I | GGNCC | 2 cut(s) | 332, 777 |
| BmiI | GGNNCC | 1 cut(s) | 333 |
| BmrFI | CCNGG | 3 cut(s) | 673, 1224, 2283 |
| BmsI | GCATC | 2 cut(s) | 411, 2120 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1337, 1369, 1520, 1552 |
| Bpu14I | TTCGAA | 1 cut(s) | 1950 |
| BpuEI | CTTGAG | 3 cut(s) | 436, 662, 2448 |
| BpuMI | CCSGG | 1 cut(s) | 673 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1680, 1815 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 1636, 2281 |
| BsaWI | WCCGGW | 2 cut(s) | 779, 826 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 135, 327, 2287 |
| Bse118I | RCCGGY | 2 cut(s) | 158, 1540 |
| Bse1I | ACTGG | 4 cut(s) | 371, 487, 850, 2446 |
| Bse3DI | GCAATG | 4 cut(s) | 904, 1329, 1552, 2144 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1680, 1815 |
| BseBI | CCWGG | 2 cut(s) | 1224, 2283 |
| BseDI | CCNNGG | 3 cut(s) | 12, 1636, 2281 |
| BseGI | GGATG | 2 cut(s) | 681, 964 |
| BseJI | GATNNNNATC | 2 cut(s) | 1680, 1815 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 135, 327, 2287 |
| BseMI | GCAATG | 4 cut(s) | 904, 1329, 1552, 2144 |
| BseMII | CTCAG | 4 cut(s) | 1572, 1946, 2140, 2748 |
| BseNI | ACTGG | 4 cut(s) | 371, 487, 850, 2446 |
| BseRI | GAGGAG | 1 cut(s) | 1127 |
| BseXI | GCAGC | 9 cut(s) | 79, 1136, 1403, 1621, 1827, 2290, 2527, 2782, 2785 |
| BseYI | CCCAGC | 1 cut(s) | 2503 |
| BsgI | GTGCAG | 1 cut(s) | 1628 |
| BshFI | GGCC | 2 cut(s) | 334, 2537 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1176 |
| BsiSI | CCGG | 5 cut(s) | 159, 672, 780, 827, 1541 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 135, 327, 2287 |
| BsmAI | GTCTC | 3 cut(s) | 934, 1060, 1671 |
| BsmI | GAATGC | 1 cut(s) | 316 |
| BsnI | GGCC | 2 cut(s) | 334, 2537 |
| BsoBI | CYCGRG | 1 cut(s) | 1176 |
| Bsp119I | TTCGAA | 1 cut(s) | 1950 |
| Bsp1286I | GDGCHC | 1 cut(s) | 20 |
| Bsp143I | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| Bsp19I | CCATGG | 1 cut(s) | 1636 |
| BspACI | CCGC | 2 cut(s) | 2538, 2543 |
| BspANI | GGCC | 2 cut(s) | 334, 2537 |
| BspCNI | CTCAG | 4 cut(s) | 1571, 1945, 2139, 2749 |
| BspHI | TCATGA | 1 cut(s) | 1782 |
| BspLI | GGNNCC | 1 cut(s) | 333 |
| BspMAI | CTGCAG | 1 cut(s) | 97 |
| BspMI | ACCTGC | 1 cut(s) | 1165 |
| BspPI | GGATC | 2 cut(s) | 854, 1968 |
| BspT104I | TTCGAA | 1 cut(s) | 1950 |
| BsrDI | GCAATG | 4 cut(s) | 904, 1329, 1552, 2144 |
| BsrFI | RCCGGY | 2 cut(s) | 158, 1540 |
| BsrI | ACTGG | 4 cut(s) | 371, 487, 850, 2446 |
| BssAI | RCCGGY | 2 cut(s) | 158, 1540 |
| BssECI | CCNNGG | 3 cut(s) | 12, 1636, 2281 |
| BssMI | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| BssNAI | GTATAC | 2 cut(s) | 832, 1431 |
| BssT1I | CCWWGG | 2 cut(s) | 12, 1636 |
| Bst1107I | GTATAC | 2 cut(s) | 832, 1431 |
| Bst2UI | CCWGG | 2 cut(s) | 1224, 2283 |
| Bst4CI | ACNGT | 2 cut(s) | 586, 2386 |
| Bst6I | CTCTTC | 8 cut(s) | 394, 612, 932, 1015, 1063, 1104, 1201, 1338 |
| BstBI | TTCGAA | 1 cut(s) | 1950 |
| BstC8I | GCNNGC | 2 cut(s) | 789, 871 |
| BstDEI | CTNAG | 5 cut(s) | 1558, 1932, 2126, 2757, 2784 |
| BstDSI | CCRYGG | 1 cut(s) | 1636 |
| BstF5I | GGATG | 2 cut(s) | 681, 964 |
| BstHHI | GCGC | 1 cut(s) | 1588 |
| BstKTI | GATC | 7 cut(s) | 862, 1169, 1597, 1819, 1963, 2093, 2486 |
| BstMAI | GTCTC | 3 cut(s) | 934, 1060, 1671 |
| BstMBI | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 98, 145, 187, 875, 1228, 1583, 2546 |
| BstNI | CCWGG | 2 cut(s) | 1224, 2283 |
| BstNSI | RCATGY | 2 cut(s) | 1043, 2249 |
| BstSCI | CCNGG | 3 cut(s) | 671, 1222, 2281 |
| BstSFI | CTRYAG | 3 cut(s) | 93, 913, 1185 |
| BstV1I | GCAGC | 9 cut(s) | 79, 1136, 1403, 1621, 1827, 2290, 2527, 2782, 2785 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 2 cut(s) | 1960, 2090 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1758, 2647 |
| BstYI | RGATCY | 2 cut(s) | 1960, 2090 |
| BstZ17I | GTATAC | 2 cut(s) | 832, 1431 |
| BsuRI | GGCC | 2 cut(s) | 334, 2537 |
| BtgI | CCRYGG | 1 cut(s) | 1636 |
| BtsCI | GGATG | 2 cut(s) | 681, 964 |
| BtsIMutI | CAGTG | 3 cut(s) | 364, 2134, 2382 |
| BveI | ACCTGC | 1 cut(s) | 1165 |
| Cac8I | GCNNGC | 2 cut(s) | 789, 871 |
| CciI | TCATGA | 1 cut(s) | 1782 |
| CfoI | GCGC | 1 cut(s) | 1588 |
| Cfr10I | RCCGGY | 2 cut(s) | 158, 1540 |
| Cfr13I | GGNCC | 2 cut(s) | 332, 777 |
| Csp6I | GTAC | 5 cut(s) | 87, 276, 2100, 2637, 2754 |
| CviQI | GTAC | 5 cut(s) | 87, 276, 2100, 2637, 2754 |
| DdeI | CTNAG | 5 cut(s) | 1558, 1932, 2126, 2757, 2784 |
| DpnI | GATC | 7 cut(s) | 861, 1168, 1596, 1818, 1962, 2092, 2485 |
| DpnII | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| DraI | TTTAAA | 2 cut(s) | 1474, 2122 |
| DraIII | CACNNNGTG | 1 cut(s) | 44 |
| EaeI | YGGCCR | 1 cut(s) | 2535 |
| Eam1104I | CTCTTC | 8 cut(s) | 394, 612, 932, 1015, 1063, 1104, 1201, 1338 |
| EarI | CTCTTC | 8 cut(s) | 394, 612, 932, 1015, 1063, 1104, 1201, 1338 |
| Eco130I | CCWWGG | 2 cut(s) | 12, 1636 |
| Eco24I | GRGCYC | 1 cut(s) | 20 |
| Eco32I | GATATC | 1 cut(s) | 1682 |
| Eco47I | GGWCC | 1 cut(s) | 777 |
| Eco57I | CTGAAG | 3 cut(s) | 723, 1167, 2541 |
| Eco88I | CYCGRG | 1 cut(s) | 1176 |
| EcoRI | GAATTC | 1 cut(s) | 2706 |
| EcoRII | CCWGG | 2 cut(s) | 1222, 2281 |
| EcoRV | GATATC | 1 cut(s) | 1682 |
| EcoT14I | CCWWGG | 2 cut(s) | 12, 1636 |
| EcoT22I | ATGCAT | 1 cut(s) | 2277 |
| EcoT38I | GRGCYC | 1 cut(s) | 20 |
| ErhI | CCWWGG | 2 cut(s) | 12, 1636 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 862, 894, 1467, 1499, 1712, 1744 |
| FauNDI | CATATG | 1 cut(s) | 2169 |
| FbaI | TGATCA | 1 cut(s) | 1816 |
| FblI | GTMKAC | 4 cut(s) | 831, 998, 1198, 1430 |
| FokI | GGATG | 2 cut(s) | 688, 971 |
| FriOI | GRGCYC | 1 cut(s) | 20 |
| FspI | TGCGCA | 1 cut(s) | 1587 |
| GlaI | GCGC | 1 cut(s) | 1587 |
| GsaI | CCCAGC | 1 cut(s) | 2507 |
| HaeIII | GGCC | 2 cut(s) | 334, 2537 |
| HapII | CCGG | 5 cut(s) | 159, 672, 780, 827, 1541 |
| HhaI | GCGC | 1 cut(s) | 1588 |
| Hin6I | GCGC | 1 cut(s) | 1586 |
| HinP1I | GCGC | 1 cut(s) | 1586 |
| HincII | GTYRAC | 1 cut(s) | 2781 |
| HindII | GTYRAC | 1 cut(s) | 2781 |
| HindIII | AAGCTT | 3 cut(s) | 168, 498, 2559 |
| HinfI | GANTC | 6 cut(s) | 1172, 1181, 1981, 2263, 2399, 2417 |
| HpaI | GTTAAC | 1 cut(s) | 2781 |
| HpaII | CCGG | 5 cut(s) | 159, 672, 780, 827, 1541 |
| HphI | GGTGA | 7 cut(s) | 173, 1019, 1352, 1652, 1979, 2272, 2426 |
| HpyCH4III | ACNGT | 2 cut(s) | 586, 2386 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 98, 145, 187, 875, 1228, 1583, 2546 |
| HpyF3I | CTNAG | 5 cut(s) | 1558, 1932, 2126, 2757, 2784 |
| HspAI | GCGC | 1 cut(s) | 1586 |
| Ksp22I | TGATCA | 1 cut(s) | 1816 |
| KspAI | GTTAAC | 1 cut(s) | 2781 |
| Kzo9I | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| LmnI | GCTCC | 3 cut(s) | 1121, 1326, 2290 |
| Lsp1109I | GCAGC | 9 cut(s) | 79, 1136, 1403, 1621, 1827, 2290, 2527, 2782, 2785 |
| LweI | GCATC | 2 cut(s) | 411, 2120 |
| MaeIII | GTNAC | 6 cut(s) | 7, 373, 716, 841, 961, 1030 |
| MalI | GATC | 7 cut(s) | 861, 1168, 1596, 1818, 1962, 2092, 2485 |
| MboI | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| MfeI | CAATTG | 1 cut(s) | 1388 |
| MflI | RGATCY | 2 cut(s) | 1960, 2090 |
| MhlI | GDGCHC | 1 cut(s) | 20 |
| MlyI | GAGTC | 2 cut(s) | 1190, 2272 |
| MmeI | TCCRAC | 3 cut(s) | 437, 2233, 2459 |
| Mph1103I | ATGCAT | 1 cut(s) | 2277 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1383, 1446, 2368 |
| MslI | CAYNNNNRTG | 6 cut(s) | 159, 321, 369, 419, 1334, 2688 |
| MspA1I | CMGCKG | 5 cut(s) | 92, 743, 1127, 2540, 2771 |
| MspI | CCGG | 5 cut(s) | 159, 672, 780, 827, 1541 |
| MspR9I | CCNGG | 3 cut(s) | 673, 1224, 2283 |
| MunI | CAATTG | 1 cut(s) | 1388 |
| Mva1269I | GAATGC | 1 cut(s) | 316 |
| MvaI | CCWGG | 2 cut(s) | 1224, 2283 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 98, 145, 187, 875, 1228, 1583, 2546 |
| NciI | CCSGG | 1 cut(s) | 673 |
| NcoI | CCATGG | 1 cut(s) | 1636 |
| NdeI | CATATG | 1 cut(s) | 2169 |
| NdeII | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| NlaIV | GGNNCC | 1 cut(s) | 333 |
| NmuCI | GTSAC | 4 cut(s) | 7, 373, 716, 961 |
| NsbI | TGCGCA | 1 cut(s) | 1587 |
| NsiI | ATGCAT | 1 cut(s) | 2277 |
| NspI | RCATGY | 2 cut(s) | 1043, 2249 |
| NspV | TTCGAA | 1 cut(s) | 1950 |
| PaeR7I | CTCGAG | 1 cut(s) | 1176 |
| PagI | TCATGA | 1 cut(s) | 1782 |
| PaqCI | CACCTGC | 1 cut(s) | 1165 |
| PciI | ACATGT | 1 cut(s) | 1039 |
| PctI | GAATGC | 1 cut(s) | 316 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1383, 1446, 2368 |
| PfeI | GAWTC | 4 cut(s) | 1172, 1981, 2399, 2417 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 135 |
| PfoI | TCCNGGA | 1 cut(s) | 671 |
| PleI | GAGTC | 2 cut(s) | 1189, 2271 |
| PpsI | GAGTC | 2 cut(s) | 1189, 2271 |
| PscI | ACATGT | 1 cut(s) | 1039 |
| PshBI | ATTAAT | 1 cut(s) | 2688 |
| Psp6I | CCWGG | 2 cut(s) | 1222, 2281 |
| PspFI | CCCAGC | 1 cut(s) | 2503 |
| PspGI | CCWGG | 2 cut(s) | 1222, 2281 |
| PspN4I | GGNNCC | 1 cut(s) | 333 |
| PspPI | GGNCC | 2 cut(s) | 332, 777 |
| PstI | CTGCAG | 1 cut(s) | 97 |
| PsuI | RGATCY | 2 cut(s) | 1960, 2090 |
| PvuII | CAGCTG | 4 cut(s) | 92, 743, 1127, 2771 |
| RsaI | GTAC | 5 cut(s) | 88, 277, 2101, 2638, 2755 |
| RsaNI | GTAC | 5 cut(s) | 87, 276, 2100, 2637, 2754 |
| RseI | CAYNNNNRTG | 6 cut(s) | 159, 321, 369, 419, 1334, 2688 |
| Sau3AI | GATC | 7 cut(s) | 859, 1166, 1594, 1816, 1960, 2090, 2483 |
| Sau96I | GGNCC | 2 cut(s) | 332, 777 |
| ScaI | AGTACT | 1 cut(s) | 2755 |
| SchI | GAGTC | 2 cut(s) | 1190, 2272 |
| ScrFI | CCNGG | 3 cut(s) | 673, 1224, 2283 |
| SduI | GDGCHC | 1 cut(s) | 20 |
| SfaNI | GCATC | 2 cut(s) | 411, 2120 |
| SfcI | CTRYAG | 3 cut(s) | 93, 913, 1185 |
| Sfr274I | CTCGAG | 1 cut(s) | 1176 |
| SfuI | TTCGAA | 1 cut(s) | 1950 |
| SinI | GGWCC | 1 cut(s) | 777 |
| SlaI | CTCGAG | 1 cut(s) | 1176 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 159, 321, 369, 419, 1334, 2688 |
| SmlI | CTYRAG | 4 cut(s) | 451, 641, 1176, 2463 |
| SmoI | CTYRAG | 4 cut(s) | 451, 641, 1176, 2463 |
| SpeI | ACTAGT | 1 cut(s) | 1381 |
| SsiI | CCGC | 2 cut(s) | 2538, 2543 |
| SspI | AATATT | 3 cut(s) | 2045, 2179, 2833 |
| StyD4I | CCNGG | 3 cut(s) | 671, 1222, 2281 |
| StyI | CCWWGG | 2 cut(s) | 12, 1636 |
| TaaI | ACNGT | 2 cut(s) | 586, 2386 |
| TaqI | TCGA | 4 cut(s) | 1177, 1714, 1950, 2266 |
| TaqII | GACCGA | 1 cut(s) | 140 |
| TatI | WGTACW | 2 cut(s) | 2099, 2753 |
| TauI | GCSGC | 1 cut(s) | 2540 |
| TfiI | GAWTC | 4 cut(s) | 1172, 1981, 2399, 2417 |
| TscAI | CASTG | 3 cut(s) | 371, 2134, 2389 |
| TseFI | GTSAC | 4 cut(s) | 7, 373, 716, 961 |
| TseI | GCWGC | 9 cut(s) | 92, 1124, 1416, 1609, 1840, 2303, 2540, 2795, 2798 |
| Tsp45I | GTSAC | 4 cut(s) | 7, 373, 716, 961 |
| TspRI | CASTG | 3 cut(s) | 371, 2134, 2389 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 135 |
| VpaK11BI | GGWCC | 1 cut(s) | 777 |
| VspI | ATTAAT | 1 cut(s) | 2688 |
| XapI | RAATTY | 4 cut(s) | 1285, 2066, 2377, 2706 |
| XbaI | TCTAGA | 2 cut(s) | 533, 2435 |
| XceI | RCATGY | 2 cut(s) | 1043, 2249 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 19 |
| XhoI | CTCGAG | 1 cut(s) | 1176 |
| XmiI | GTMKAC | 4 cut(s) | 831, 998, 1198, 1430 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1383, 1446, 2368 |
| ZrmI | AGTACT | 1 cut(s) | 2755 |
| Zsp2I | ATGCAT | 1 cut(s) | 2277 |