MD10G1018300.v1.1

disease resistance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
2323796 .. 2329007
5212 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1018300.v1.1.491

Sequence Viewer

Length: 2241 bp
ATGCTCGATGCAGATTTTAATGCCAAACTTGGGGATTTTGGTTTAGCAGAAGTGTATGAGCATAGTGTTAAAGATGTGTTGGCTCAACAAGATTTGGATCTGACATTAGAAGACAAGCTAGAGGATATGGAAAAAGTTGAGTGGAACAAGTTAAATCGAATGGCTTGCTCTACAATTAGCTTATGTCTTGCAACACCTCAAAAGTATTTTGTCATGCGAGAAATGTCATCTAAGTCGCTATGGCAAAAATTGGAGGACAAGTACATGACAAAGAGCATCGAAAATCGCCTCCATTTGAAAAAACAGTTATACCGATTCCAATACAAAGAAGATATGAAAATGATTACACACCTCGATTCATTTAACAAATTAATCGTTGATTTGTTAAATTTAGATGAACATGTCAAGGATGAAGATAAAGCCTTGATTTTGTTAAATTCATTACCTGAGGCGTATGATTATTTAGCTACTACTTTAATTTATGGTAAAGACACCATAAATTTTGAAAATGTGTCTAATGCATTGATGAACCATGAAGTTAGACATAAAGATAAGCAAGTCCATAATACAGCATCAGATGCTTTGTTTGTTAGAGGCAGAATGAATAAAAGACGGAGATTCAATAACAGAAGAAGATCTCAGTCTCGACCACGAGGTAATTCACAAAATAGAAAAATATTAGACAAAGATGAATGTGCATTTTGTCATACAAAGGGACATTGGATAAAGGATTGCCCTAAGTTGCACAAGAATAACAGAAACACCAATGCTAATGTTGCACTTAGTGATGATGAATCTGATTATGGACTGCTGAAAGGAGCGAAAACTTGCAAGCTCGACTTCTGTGAGCATTGTGTCTTAGGTAAGCAAACCAGAGTTAAATTTAGTATTGTTGTGCATCAAACTAAAGGAATCCTAGATTATGTGCATTCAGATGTTTGGGGTCCTACCAAGATTGCATCATTGAGTGGTAAGCACTGGTTTGTAACCTTTATTGATGACTACTCTAGAAGAGCTTGGGTTTATACAATGAAACACAAAGATGAAGTGTTAAATATTTTCTTAAACTGGAAGAAAATGATTGAAAACCAAACTGGTAAGAAAATTAAAGTTTTGAGGTCAGATAATGGTGGTGAATACACCTCTGATCCATTTTTGAAAGTTTGTAGAGAAGAAGGTATAATAAAGCATTTCACTGTTCGTGATACTCCCCAACAAAATGGAGTTGCTGAAAGGTTAAACAGAACGTTACTCGAAAAGGTTAGATGTATGTTGGCTCAATCTGGTTTAAGTAAGGCATTTTGGGCAGAGGCAATTACATATGCTTGTCACATTATCAATCGTTTACCTTCGTCTGCAATTGAAGAAATCCCAGAAAGTTATAAGGAAGCTATGAACAGCTCTAAAAATACAGAGTGGGGTAAGGCTATGGATGAAGAAATGAATTCTCTTATGAAGAACAACACTTGGGAGTTAGTTCAATTGCCTCTTAGCAAGAGAGCTATTGGCTGCAAGTGGGTGTATACCAAAAAAGAAGGTCGTCCAGGAGAAGACAATGTAAGATTCAAAGCACGAGTGGTAGCAAAAGGATATACACAAAAGGAAGGTATTGATTATAATGAACGAAGTGATAGCAGTTTTGAGAATTTTGTGGTTGGATATGTTGATTCTGACTATGCTGGAGATTTGGATAAAAGAAGATCGACTACTGGCTACTTATTTACCATGGCCAAATGGCCAGTTAGTTGGAGGTCCACACTACAATCCACAGTCGCTTTGTCAACAACGGAGGCCGAATATATGGCAATTGCAGAAGCTGTAAATGAGGCCATTTGGATACATGGACTGATAAAGAATCTAGGAATTTATCAAAAGCAGGTGGAGCTACATTGTGATAGTCAAAGTTTGGCGAGAGCGAGAAAGCCGGTGGAGGATGATGGAACAATGGTGGTAGATTGGGTTTGGAGCATGTGGGAAAAAGGGAAACTGATCGAAGCTACTGATCCAAGGTTGTTGGGGAAATTTGATACGGTAGAGATGGAAATGATGCTGATGATTGGACTTGCTAGTGTGCACCCAAACCTTGTGAAGAGGCCAACGGTGAAGGAAGCTGCAAAGATTTTTAAAGGCGAAAAGACGCCTCTTCTGTTGCCTTCAAGAAAACCAAAGGTGAGCCTTCGGCCTGTTTTGCCTGATGATGTACAATATTTGACTCCGAAAAGCCACTTTGACAAGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

747

Amino Acids

86.14

Weight (kDa)

8.81

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 41 - 185 8.9e-26 gag-polypeptide of LTR copia-type
rve PF00665 310 - 399 3.3e-12 Integrase core domain
RVT_2 PF07727 487 - 543 8.6e-14 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000278)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G29785
fragaria_vesca FvH4_1g10046 FvH4_1g17351 FvH4_1g18441 FvH4_1g24222 FvH4_2g00141 FvH4_2g05931 FvH4_2g06671 FvH4_2g14030 FvH4_2g15291 FvH4_2g22611 FvH4_2g22612 FvH4_2g26380 FvH4_2g39202 FvH4_2g39202 FvH4_3g06691 FvH4_3g08580 FvH4_3g20502 FvH4_3g20503 FvH4_3g22421 FvH4_3g42580 FvH4_4g02061 FvH4_4g06794 FvH4_4g08661 FvH4_4g11771 FvH4_4g14601 FvH4_4g14721 FvH4_4g20921 FvH4_4g33601 FvH4_4g33602 FvH4_5g07492 FvH4_5g20321 FvH4_5g21591 FvH4_5g30343 FvH4_5g37875 FvH4_6g04372 FvH4_6g04373 FvH4_6g04373 FvH4_6g21377 FvH4_6g23760 FvH4_6g29471 FvH4_6g43142 FvH4_7g14351 FvH4_7g14352 FvH4_7g22582 FvH4_7g22583 FvH4_7g22584
malus_domestica MD00G1179400.v1.1 MD01G1170500.v1.1 MD03G1286700.v1.1 MD04G1054600.v1.1 MD04G1071700.v1.1 MD04G1193900.v1.1 MD08G1054300.v1.1 MD08G1217500.v1.1 MD09G1034600.v1.1 MD09G1098100.v1.1 MD10G1018300.v1.1 MD10G1220000.v1.1 MD10G1250300.v1.1 MD12G1014400.v1.1 MD15G1021000.v1.1 MD16G1112200.v1.1
prunus_persica Prupe.1G188900_v2.0.a1 Prupe.1G258000_v2.0.a1 Prupe.4G233400_v2.0.a1
pyrus_communis pycom01g10100 pycom02g01340 pycom03g19700 pycom05g01320 pycom07g16000 pycom07g16520 pycom11g26500 pycom13g09380 pycom13g13960 pycom14g08180 pycom14g16810 pycom16g09590
rosa_chinensis RchiOBHm_Chr1g0319891 RchiOBHm_Chr1g0333711 RchiOBHm_Chr2g0115331 RchiOBHm_Chr2g0143411 RchiOBHm_Chr2g0167631 RchiOBHm_Chr3g0448581 RchiOBHm_Chr3g0494991 RchiOBHm_Chr4g0442471 RchiOBHm_Chr6g0262311 RchiOBHm_Chr6g0301831 RchiOBHm_Chr6g0301841 RchiOBHm_Chr7g0183451
rosa_roxburghii Rroxscaffold_1G00039280 Rroxscaffold_1G00047670 Rroxscaffold_1G00066330 Rroxscaffold_2G00107510 Rroxscaffold_3G00255410 Rroxscaffold_4G00301460 Rroxscaffold_5G00352730 Rroxscaffold_7G00166350 Rroxscaffold_7G00166360 Rroxscaffold_7G00203820
rosa_rugosa Rorug03G0240500 Rorug05G0191700 Rorug06G0310200
rosa_samantha Rh2BG287000 Rh4CG073500 Rh4CG176200 Rh4CG191400 Rh5BG356100 Rh5BG434100 Rh6AG110600 Rh6AG421900 Rh6AG422000 Rh6AG422100 Rh6BG428600 Rh6BG428700 Rh6BG428800 Rh6CG435200 Rh6CG435300 Rh6CG435400 Rh6DG422000 Rh6DG422100 Rh6DG422200 Rh7BG190500 Rh7CG172800 Rh7CG225200
rosa_wichuraiana Rw2G044060 Rw6G036540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1383, 1617
AarI CACCTGC 1 cut(s) 1867
Acc36I ACCTGC 1 cut(s) 1867
AccI GTMKAC 1 cut(s) 1523
AclI AACGTT 1 cut(s) 1247
AclWI GGATC 3 cut(s) 105, 1142, 1997
AcoI YGGCCR 2 cut(s) 1728, 1736
AcsI RAATTY 8 cut(s) 388, 436, 499, 881, 1444, 1645, 1863, 2021
AcyI GRCGYC 1 cut(s) 2138
AdeI CACNNNGTG 1 cut(s) 785
AfaI GTAC 2 cut(s) 263, 2202
AfiI CCNNNNNNNGG 1 cut(s) 30
AflIII ACRYGT 1 cut(s) 400
AgsI TTSAA 9 cut(s) 298, 506, 622, 1085, 1159, 1364, 1481, 1567, 2157
AjnI CCWGG 1 cut(s) 1543
Alw21I GWGCWC 1 cut(s) 2076
Alw26I GTCTC 1 cut(s) 648
Alw44I GTGCAC 1 cut(s) 2072
AlwI GGATC 3 cut(s) 105, 1142, 1997
AlwNI CAGNNNCTG 1 cut(s) 1817
AoxI GGCC 6 cut(s) 1728, 1736, 1791, 1827, 2093, 2180
ApaLI GTGCAC 1 cut(s) 2072
ApeKI GCWGC 2 cut(s) 1509, 2111
ApoI RAATTY 8 cut(s) 388, 436, 499, 881, 1444, 1645, 1863, 2021
AseI ATTAAT 1 cut(s) 371
AspS9I GGNCC 2 cut(s) 944, 1752
AsuHPI GGTGA 3 cut(s) 1145, 2113, 2182
AvaII GGWCC 2 cut(s) 944, 1752
AxyI CCTNAGG 1 cut(s) 447
BaeGI GKGCMC 1 cut(s) 2076
BalI TGGCCA 2 cut(s) 1730, 1738
BarI GAAGNNNNNNTAC 2 cut(s) 1690, 1722
BauI CACGAG 2 cut(s) 651, 1572
BbsI GAAGAC 2 cut(s) 117, 1557
Bbv12I GWGCWC 1 cut(s) 2076
BbvI GCAGC 2 cut(s) 1496, 2098
BccI CCATC 2 cut(s) 1931, 2032
BcgI CGANNNNNNTGC 2 cut(s) 147, 181
BciT130I CCWGG 1 cut(s) 1545
BciVI GTATCC 1 cut(s) 1830
BcoDI GTCTC 1 cut(s) 648
BfaI CTAG 5 cut(s) 119, 917, 1008, 1859, 2067
BfuAI ACCTGC 1 cut(s) 1867
BfuI GTATCC 1 cut(s) 1830
BglII AGATCT 1 cut(s) 635
BisI GCNGC 2 cut(s) 1510, 2112
BlsI GCNGC 2 cut(s) 1511, 2113
Bme1390I CCNGG 1 cut(s) 1545
Bme18I GGWCC 2 cut(s) 944, 1752
BmgT120I GGNCC 2 cut(s) 944, 1752
BmiI GGNNCC 1 cut(s) 945
BmrFI CCNGG 1 cut(s) 1545
BmsI GCATC 6 cut(s) 285, 568, 581, 907, 968, 2037
BpiI GAAGAC 2 cut(s) 117, 1557
BpmI CTGGAG 1 cut(s) 1701
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 1 cut(s) 2138
BsaJI CCNNGG 2 cut(s) 1725, 2006
BsaXI ACNNNNNCTCC 2 cut(s) 245, 275
Bsc4I CCNNNNNNNGG 1 cut(s) 30
Bse118I RCCGGY 1 cut(s) 1924
Bse1I ACTGG 5 cut(s) 983, 1073, 1099, 1714, 1739
Bse21I CCTNAGG 1 cut(s) 447
Bse8I GATNNNNATC 1 cut(s) 96
BseBI CCWGG 1 cut(s) 1545
BseDI CCNNGG 2 cut(s) 1725, 2006
BseGI GGATG 3 cut(s) 415, 1438, 1939
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 1 cut(s) 30
BseMII CTCAG 2 cut(s) 438, 653
BseNI ACTGG 5 cut(s) 983, 1073, 1099, 1714, 1739
BseSI GKGCMC 1 cut(s) 2076
BseXI GCAGC 2 cut(s) 1496, 2098
BshFI GGCC 6 cut(s) 1730, 1738, 1793, 1829, 2095, 2182
BsiHKAI GWGCWC 1 cut(s) 2076
BsiSI CCGG 1 cut(s) 1925
BslFI GGGAC 1 cut(s) 729
BslI CCNNNNNNNGG 1 cut(s) 30
BsmAI GTCTC 1 cut(s) 648
BsmFI GGGAC 1 cut(s) 729
BsmI GAATGC 1 cut(s) 928
BsnI GGCC 6 cut(s) 1730, 1738, 1793, 1829, 2095, 2182
Bsp1286I GDGCHC 1 cut(s) 2076
Bsp1407I TGTACA 1 cut(s) 2200
Bsp143I GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
Bsp19I CCATGG 1 cut(s) 1725
BspANI GGCC 6 cut(s) 1730, 1738, 1793, 1829, 2095, 2182
BspCNI CTCAG 2 cut(s) 439, 652
BspLI GGNNCC 1 cut(s) 945
BspMI ACCTGC 1 cut(s) 1867
BspPI GGATC 3 cut(s) 105, 1142, 1997
BspQI GCTCTTC 1 cut(s) 1006
BsrFI RCCGGY 1 cut(s) 1924
BsrGI TGTACA 1 cut(s) 2200
BsrI ACTGG 5 cut(s) 983, 1073, 1099, 1714, 1739
BssAI RCCGGY 1 cut(s) 1924
BssECI CCNNGG 2 cut(s) 1725, 2006
BssMI GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
BssNAI GTATAC 1 cut(s) 1524
BssNI GRCGYC 1 cut(s) 2138
BssSI CACGAG 2 cut(s) 651, 1572
BssT1I CCWWGG 2 cut(s) 1725, 2006
Bst1107I GTATAC 1 cut(s) 1524
Bst2BI CACGAG 2 cut(s) 651, 1572
Bst2UI CCWGG 1 cut(s) 1545
Bst4CI ACNGT 5 cut(s) 306, 1198, 1771, 2032, 2101
Bst6I CTCTTC 3 cut(s) 1006, 2084, 2148
BstACI GRCGYC 1 cut(s) 2138
BstAPI GCANNNNNTGC 1 cut(s) 578
BstAUI TGTACA 1 cut(s) 2200
BstC8I GCNNGC 2 cut(s) 166, 833
BstDEI CTNAG 7 cut(s) 231, 447, 639, 738, 782, 859, 1490
BstDSI CCRYGG 1 cut(s) 1725
BstF5I GGATG 3 cut(s) 415, 1438, 1939
BstKTI GATC 6 cut(s) 100, 638, 1150, 1703, 1992, 2005
BstMAI GTCTC 1 cut(s) 648
BstMBI GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
BstMWI GCNNNNNNNGC 5 cut(s) 578, 776, 1304, 1882, 2188
BstNI CCWGG 1 cut(s) 1545
BstNSI RCATGY 2 cut(s) 404, 1972
BstSCI CCNGG 1 cut(s) 1543
BstSLI GKGCMC 1 cut(s) 2076
BstV1I GCAGC 2 cut(s) 1496, 2098
BstV2I GAAGAC 2 cut(s) 117, 1557
BstX2I RGATCY 2 cut(s) 97, 635
BstXI CCANNNNNNTGG 2 cut(s) 1220, 1746
BstYI RGATCY 2 cut(s) 97, 635
BstZ17I GTATAC 1 cut(s) 1524
Bsu36I CCTNAGG 1 cut(s) 447
BsuI GTATCC 1 cut(s) 1830
BsuRI GGCC 6 cut(s) 1730, 1738, 1793, 1829, 2095, 2182
BtgI CCRYGG 1 cut(s) 1725
BtsCI GGATG 3 cut(s) 415, 1438, 1939
BtsIMutI CAGTG 2 cut(s) 976, 1194
BveI ACCTGC 1 cut(s) 1867
Cac8I GCNNGC 2 cut(s) 166, 833
CaiI CAGNNNCTG 1 cut(s) 1817
Cfr10I RCCGGY 1 cut(s) 1924
Cfr13I GGNCC 2 cut(s) 944, 1752
CseI GACGC 1 cut(s) 2146
Csp6I GTAC 2 cut(s) 262, 2201
CviAII CATG 7 cut(s) 214, 265, 401, 533, 1726, 1841, 1969
CviQI GTAC 2 cut(s) 262, 2201
DdeI CTNAG 7 cut(s) 231, 447, 639, 738, 782, 859, 1490
DpnI GATC 6 cut(s) 99, 637, 1149, 1702, 1991, 2004
DpnII GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
DraI TTTAAA 1 cut(s) 2125
DraIII CACNNNGTG 1 cut(s) 785
EaeI YGGCCR 2 cut(s) 1728, 1736
Eam1104I CTCTTC 3 cut(s) 1006, 2084, 2148
EarI CTCTTC 3 cut(s) 1006, 2084, 2148
Eco130I CCWWGG 2 cut(s) 1725, 2006
Eco47I GGWCC 2 cut(s) 944, 1752
Eco81I CCTNAGG 1 cut(s) 447
EcoO109I RGGNCCY 1 cut(s) 944
EcoRI GAATTC 1 cut(s) 1444
EcoRII CCWGG 1 cut(s) 1543
EcoT14I CCWWGG 2 cut(s) 1725, 2006
EcoT22I ATGCAT 1 cut(s) 523
ErhI CCWWGG 2 cut(s) 1725, 2006
FaeI CATG 7 cut(s) 217, 268, 404, 536, 1729, 1844, 1972
FalI AAGNNNNNCTT 2 cut(s) 824, 856
FaqI GGGAC 1 cut(s) 729
FatI CATG 7 cut(s) 213, 264, 400, 532, 1725, 1840, 1968
FauNDI CATATG 1 cut(s) 1321
FblI GTMKAC 1 cut(s) 1523
Fnu4HI GCNGC 2 cut(s) 1510, 2112
FokI GGATG 3 cut(s) 422, 1445, 1946
Fsp4HI GCNGC 2 cut(s) 1510, 2112
FspBI CTAG 5 cut(s) 119, 917, 1008, 1859, 2067
GluI GCNGC 2 cut(s) 1510, 2112
GsuI CTGGAG 1 cut(s) 1701
HaeIII GGCC 6 cut(s) 1730, 1738, 1793, 1829, 2095, 2182
HapII CCGG 1 cut(s) 1925
HgaI GACGC 1 cut(s) 2146
Hin1I GRCGYC 1 cut(s) 2138
Hin1II CATG 7 cut(s) 217, 268, 404, 536, 1729, 1844, 1972
HincII GTYRAC 1 cut(s) 1782
HindII GTYRAC 1 cut(s) 1782
HinfI GANTC 9 cut(s) 315, 356, 618, 794, 912, 1563, 1667, 1855, 2212
HpaII CCGG 1 cut(s) 1925
HphI GGTGA 3 cut(s) 1145, 2113, 2182
Hpy166II GTNNAC 5 cut(s) 1346, 1524, 1755, 1782, 2074
Hpy188I TCNGA 8 cut(s) 102, 577, 799, 934, 1123, 1147, 1672, 2217
Hpy188III TCNNGA 4 cut(s) 645, 1008, 1202, 2157
Hpy8I GTNNAC 5 cut(s) 1346, 1524, 1755, 1782, 2074
HpyAV CCTTC 7 cut(s) 1169, 1359, 1529, 1598, 2098, 2163, 2186
HpyCH4III ACNGT 5 cut(s) 306, 1198, 1771, 2032, 2101
HpyCH4IV ACGT 1 cut(s) 1247
HpyF10VI GCNNNNNNNGC 5 cut(s) 578, 776, 1304, 1882, 2188
HpyF3I CTNAG 7 cut(s) 231, 447, 639, 738, 782, 859, 1490
HpySE526I ACGT 1 cut(s) 1247
Hsp92I GRCGYC 1 cut(s) 2138
Hsp92II CATG 7 cut(s) 217, 268, 404, 536, 1729, 1844, 1972
Kzo9I GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
LguI GCTCTTC 1 cut(s) 1006
LmnI GCTCC 3 cut(s) 818, 1882, 1965
Lsp1109I GCAGC 2 cut(s) 1496, 2098
LweI GCATC 6 cut(s) 285, 568, 581, 907, 968, 2037
MaeI CTAG 5 cut(s) 119, 917, 1008, 1859, 2067
MaeII ACGT 1 cut(s) 1247
MaeIII GTNAC 3 cut(s) 985, 1248, 1328
MalI GATC 6 cut(s) 99, 637, 1149, 1702, 1991, 2004
MboI GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
MfeI CAATTG 3 cut(s) 1359, 1481, 1806
MflI RGATCY 2 cut(s) 97, 635
MhlI GDGCHC 1 cut(s) 2076
MlsI TGGCCA 2 cut(s) 1730, 1738
MluNI TGGCCA 2 cut(s) 1730, 1738
MlyI GAGTC 1 cut(s) 2206
MmeI TCCRAC 2 cut(s) 1636, 1727
Mox20I TGGCCA 2 cut(s) 1730, 1738
Mph1103I ATGCAT 1 cut(s) 523
MscI TGGCCA 2 cut(s) 1730, 1738
MslI CAYNNNNRTG 2 cut(s) 933, 1041
Msp20I TGGCCA 2 cut(s) 1730, 1738
MspI CCGG 1 cut(s) 1925
MspR9I CCNGG 1 cut(s) 1545
MunI CAATTG 3 cut(s) 1359, 1481, 1806
Mva1269I GAATGC 1 cut(s) 928
MvaI CCWGG 1 cut(s) 1545
MwoI GCNNNNNNNGC 5 cut(s) 578, 776, 1304, 1882, 2188
NcoI CCATGG 1 cut(s) 1725
NdeI CATATG 1 cut(s) 1321
NdeII GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
NlaIII CATG 7 cut(s) 217, 268, 404, 536, 1729, 1844, 1972
NlaIV GGNNCC 1 cut(s) 945
NmuCI GTSAC 1 cut(s) 1328
NsiI ATGCAT 1 cut(s) 523
NspI RCATGY 2 cut(s) 404, 1972
PaqCI CACCTGC 1 cut(s) 1867
PciI ACATGT 1 cut(s) 400
PciSI GCTCTTC 1 cut(s) 1006
PctI GAATGC 1 cut(s) 928
PfeI GAWTC 8 cut(s) 315, 356, 618, 794, 912, 1563, 1667, 1855
PfoI TCCNGGA 1 cut(s) 1543
PkrI GCNGC 2 cut(s) 1511, 2113
PleI GAGTC 1 cut(s) 2206
PpsI GAGTC 1 cut(s) 2206
PpuMI RGGWCCY 1 cut(s) 944
PscI ACATGT 1 cut(s) 400
PshBI ATTAAT 1 cut(s) 371
PsiI TTATAA 2 cut(s) 1383, 1617
Psp1406I AACGTT 1 cut(s) 1247
Psp5II RGGWCCY 1 cut(s) 944
Psp6I CCWGG 1 cut(s) 1543
PspGI CCWGG 1 cut(s) 1543
PspN4I GGNNCC 1 cut(s) 945
PspPI GGNCC 2 cut(s) 944, 1752
PspPPI RGGWCCY 1 cut(s) 944
PstNI CAGNNNCTG 1 cut(s) 1817
PsuI RGATCY 2 cut(s) 97, 635
RsaI GTAC 2 cut(s) 263, 2202
RsaNI GTAC 2 cut(s) 262, 2201
RseI CAYNNNNRTG 2 cut(s) 933, 1041
SapI GCTCTTC 1 cut(s) 1006
SatI GCNGC 2 cut(s) 1510, 2112
Sau3AI GATC 6 cut(s) 97, 635, 1147, 1700, 1989, 2002
Sau96I GGNCC 2 cut(s) 944, 1752
SchI GAGTC 1 cut(s) 2206
ScrFI CCNGG 1 cut(s) 1545
SduI GDGCHC 1 cut(s) 2076
SfaNI GCATC 6 cut(s) 285, 568, 581, 907, 968, 2037
SinI GGWCC 2 cut(s) 944, 1752
SmiMI CAYNNNNRTG 2 cut(s) 933, 1041
SspI AATATT 3 cut(s) 678, 1057, 2207
SspMI CTAG 5 cut(s) 119, 917, 1008, 1859, 2067
StyD4I CCNGG 1 cut(s) 1543
StyI CCWWGG 2 cut(s) 1725, 2006
TaaI ACNGT 5 cut(s) 306, 1198, 1771, 2032, 2101
TaiI ACGT 1 cut(s) 1250
TaqI TCGA 9 cut(s) 6, 157, 279, 354, 646, 837, 1254, 1703, 1992
TatI WGTACW 2 cut(s) 261, 2200
TfiI GAWTC 8 cut(s) 315, 356, 618, 794, 912, 1563, 1667, 1855
TscAI CASTG 2 cut(s) 983, 1201
TseFI GTSAC 1 cut(s) 1328
TseI GCWGC 2 cut(s) 1509, 2111
Tsp45I GTSAC 1 cut(s) 1328
TspGWI ACGGA 2 cut(s) 628, 1802
TspRI CASTG 2 cut(s) 983, 1201
VneI GTGCAC 1 cut(s) 2072
VpaK11BI GGWCC 2 cut(s) 944, 1752
VspI ATTAAT 1 cut(s) 371
XapI RAATTY 8 cut(s) 388, 436, 499, 881, 1444, 1645, 1863, 2021
XbaI TCTAGA 1 cut(s) 1007
XceI RCATGY 2 cut(s) 404, 1972
XmiI GTMKAC 1 cut(s) 1523
XspI CTAG 5 cut(s) 119, 917, 1008, 1859, 2067
Zsp2I ATGCAT 1 cut(s) 523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.